Citrus Sinensis ID: 041917

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSVYP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEEcccccccHHHHccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccEEEccccccccccccccccccccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccHccccHHHHcccccccccccEEEEEccHccHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHEEEEcccHcccccHHHEEEEccccccccccccccEEEEEcccccccccccccccccccccEEEEEEcc
Coil and Loop (DISEMBL)
mnpkisdfgmarifggnqneantnrvvgtygymapeyamEGVFSIKSDVFSFGVLLEIVsgkrnsgfylskdghsLLTYTWKLWCEGealelmdpvlkqSCVGAELLKYIHIGLLcvqedparrpsmSSVVVMLASdtitlppptqpafsvgrmvassgpffssdskfcsineitlssvyp
Flexible Loop (DISEMBL)
MNPKISDFGMARifggnqneantnrVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGpffssdskfcsineitlssvyp
Low Complexity Region (SEG)
MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSVYP
Disordered region (IsUnstruct)
*********MARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE**********VVVMLASDTI****************************FCSINEI*******
Disordered Region (DISOPRED)
MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFS***********************ITLSSVYP
Disordered Region (DISEMBL)
MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSVYP
Disordered Region (DISPRO)
*NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRM**************CSINEITLSSVYP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSVYP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q8GYA4	669	Cysteine-rich receptor-li	yes	no	1.0	0.270	0.521	2e-54
Q9C5S9	674	Cysteine-rich receptor-li	no	no	0.994	0.267	0.534	4e-54
O65468	676	Cysteine-rich receptor-li	no	no	1.0	0.267	0.532	1e-53
Q8L7G3	659	Cysteine-rich receptor-li	no	no	1.0	0.274	0.526	3e-53
Q8W4G6	627	Cysteine-rich receptor-li	no	no	0.834	0.240	0.585	2e-52
O81906	849	G-type lectin S-receptor-	no	no	0.983	0.209	0.587	4e-52
Q39086	843	Receptor-like serine/thre	no	no	0.983	0.211	0.564	4e-52
Q9ZR08	852	G-type lectin S-receptor-	no	no	0.977	0.207	0.569	2e-51
Q9S972	847	Receptor-like serine/thre	no	no	0.988	0.211	0.556	3e-51
Q8RX80	659	Cysteine-rich receptor-li	no	no	0.988	0.271	0.556	4e-50

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 96/184 (52%), Positives = 134/184 (72%), Gaps = 3/184 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKI+DFGMARIFG +Q E NT+R+VGTYGYM+PEYAM G +S+KSDV+SFGVL LEI+
Sbjct: 485 MNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEII 544

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SGK+NS FY +   H L++Y W LW  G  LEL+DP + ++C   E+++ +HIGLLCVQE
Sbjct: 545 SGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQE 604

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASS--GPFFSSDSKFCSINEITLS 177
           DPA RP++S++V+ML S+T+TLP P QP       +         +S S   S+++ +++
Sbjct: 605 DPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKDPLDTDTTSKSLLGSVDDASIT 664

Query: 178 SVYP 181
            ++P
Sbjct: 665 DIHP 668

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9C5S9|CRK6_ARATH Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1

 Score =  210 bits (535), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 100/187 (53%), Positives = 139/187 (74%), Gaps = 7/187 (3%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           +NPKI+DFGMARIFG +Q + NT+R+VGTYGYMAPEYAM G FS+KSDV+SFGVL LEI+
Sbjct: 488 INPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEII 547

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SG++NS F  S     LLT+ W+LW   +AL+L+DP++ ++C  +E+++ IHIGLLCVQE
Sbjct: 548 SGRKNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQE 607

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKF-----CSINEI 174
           DPA+RP++S+V +ML S+T+TLP P QP F + +  A   P  S  S        SI++ 
Sbjct: 608 DPAKRPAISTVFMMLTSNTVTLPVPRQPGFFI-QCRAVKDPLDSDQSTTTKSFPASIDDE 666

Query: 175 TLSSVYP 181
           +++ +YP
Sbjct: 667 SITDLYP 673

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2

 Score =  208 bits (530), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/186 (53%), Positives = 137/186 (73%), Gaps = 5/186 (2%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           +NPKI+DFGMARIFG +Q + NT+R+VGTYGYMAPEYAM G FS+KSDV+SFGVL LEI+
Sbjct: 490 INPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEII 549

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SG++NS F  S     LLT+TW+LW    AL+L+DP++  +C  +E+++ IHIGLLCVQE
Sbjct: 550 SGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQE 609

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVG----RMVASSGPFFSSDSKFCSINEIT 175
           DPA+RP++S+V +ML S+T+TLP P QP F +     +    S    ++ S   SI++  
Sbjct: 610 DPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQSSPVKDPTDSDQSTTTKSTPASIDDEL 669

Query: 176 LSSVYP 181
           ++ +YP
Sbjct: 670 ITDLYP 675

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8L7G3|CRK7_ARATH Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1

 Score =  207 bits (528), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 98/186 (52%), Positives = 134/186 (72%), Gaps = 5/186 (2%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKI+DFGMARIFG +Q + NT+R+VGTYGYM+PEYAM G FS+KSDV+SFGVL LEI+
Sbjct: 473 MNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEII 532

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SG++N+ F  + D   L+T+ W+LW  G AL+L+DP +  SC  +E+++  HIGLLCVQE
Sbjct: 533 SGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQE 592

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSV----GRMVASSGPFFSSDSKFCSINEIT 175
           DP +RP+MS++ VML S+T+ LP P QP F V    G     S    ++ S   SI++ +
Sbjct: 593 DPVKRPAMSTISVMLTSNTMALPAPQQPGFFVRSRPGTNRLDSDQSTTNKSVTVSIDDKS 652

Query: 176 LSSVYP 181
           +S + P
Sbjct: 653 MSDLDP 658

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2

 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 89/152 (58%), Positives = 122/152 (80%), Gaps = 1/152 (0%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPK++DFG+ARIFG +Q + NT+R+VGT+GYMAPEYA+ G FS+KSDV+SFGVL LEI+
Sbjct: 474 MNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEII 533

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SGK+N+ FY +   H L+T+ W+LW  G AL+L+DP++  +C  +E+++ IHI LLCVQE
Sbjct: 534 SGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQE 593

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSV 151
           DPA RP +S++ +ML S+T+TLP P QP F V
Sbjct: 594 DPAERPILSTIFMMLTSNTVTLPVPLQPGFPV 625

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  204 bits (518), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 107/182 (58%), Positives = 131/182 (71%), Gaps = 4/182 (2%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV 59
           MNPKISDFGMARIFGGNQNEANT RVVGTYGYM+PEYAMEG+FS+KSDV+SFGV LLEIV
Sbjct: 666 MNPKISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIV 725

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SGKRN+    S+ G SL+ Y W L+  G + EL+DP ++ +C   E L+ IH+ +LCVQ+
Sbjct: 726 SGKRNTSLRSSEHG-SLIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQD 784

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFF--SSDSKFCSINEITLS 177
             A RP+M+SV++ML SDT TL  P QP F+  R  +    F   SS     S NEIT +
Sbjct: 785 SAAERPNMASVLLMLESDTATLAAPRQPTFTSTRRNSIDVNFALDSSQQYIVSSNEITST 844

Query: 178 SV 179
            V
Sbjct: 845 VV 846

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  204 bits (518), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 105/186 (56%), Positives = 130/186 (69%), Gaps = 8/186 (4%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV 59
           M PKISDFGMARIFG  + EANT RVVGTYGYM+PEYAM+G+FS+KSDVFSFGV LLEI+
Sbjct: 656 MTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEII 715

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPV----LKQSCVGAELLKYIHIGLL 115
           SGKRN GFY S    +LL + W+ W EG  LE++DP+    L       E+L+ I IGLL
Sbjct: 716 SGKRNKGFYNSNRDLNLLGFVWRHWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLL 775

Query: 116 CVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGR--MVASSGPFFSSDSKFCSINE 173
           CVQE    RP MSSV+VML S+T  +P P +P F +GR  + A S      D + C++N+
Sbjct: 776 CVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCIGRSPLEADSSSSTQRDDE-CTVNQ 834

Query: 174 ITLSSV 179
           ITLS +
Sbjct: 835 ITLSVI 840

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 102/179 (56%), Positives = 133/179 (74%), Gaps = 2/179 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           MNPKISDFG+ARIFGG++  ANTNRVVGTYGYM+PEYA+EG+FS KSDVFSFG V++E +
Sbjct: 669 MNPKISDFGLARIFGGSETSANTNRVVGTYGYMSPEYALEGLFSFKSDVFSFGVVVIETI 728

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SGKRN+GF+  +   SLL + W LW     +EL+D  L++SC     LK +++GLLCVQE
Sbjct: 729 SGKRNTGFHEPEKSLSLLGHAWDLWKAERGIELLDQALQESCETEGFLKCLNVGLLCVQE 788

Query: 120 DPARRPSMSSVVVML-ASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLS 177
           DP  RP+MS+VV ML +S+  TLP P QPAF + R  +SS    S+  + CS NE+T++
Sbjct: 789 DPNDRPTMSNVVFMLGSSEAATLPTPKQPAFVLRRCPSSSKASSSTKPETCSENELTIT 847

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  201 bits (510), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/185 (55%), Positives = 128/185 (69%), Gaps = 6/185 (3%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV 59
           M PKISDFGMARIFG  + EANT RVVGTYGYM+PEYAM+G+FS+KSDVFSFGV LLEI+
Sbjct: 660 MTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEII 719

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPV----LKQSCVGAELLKYIHIGLL 115
           SGKRN GFY S    +LL + W+ W EG+ LE++DP+    L       E+L+ I IGLL
Sbjct: 720 SGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLL 779

Query: 116 CVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSD-SKFCSINEI 174
           CVQE    RP MSSV+VML S+T  +P P +P F VGR         S+     C++N++
Sbjct: 780 CVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQV 839

Query: 175 TLSSV 179
           TLS +
Sbjct: 840 TLSVI 844

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RX80|CRK18_ARATH Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2

 Score =  197 bits (500), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/185 (55%), Positives = 130/185 (70%), Gaps = 6/185 (3%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKI+DFGMARIFG +Q  ANT RVVGT+GYM+PEY   G FS+KSDV+SFGVL LEI+
Sbjct: 476 MNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEII 535

Query: 60  SGKRNSGFYLSKDG--HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCV 117
           SGK+NS FY   DG  ++L+TY WKLW      EL+DP + Q     E+++YIHIGLLCV
Sbjct: 536 SGKKNSSFY-QMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCV 594

Query: 118 QEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKF-CSINEITL 176
           QE+PA RP+MS++  ML + +ITLP P  P F   R    S P  S+   F CS++E T+
Sbjct: 595 QENPADRPTMSTIHQMLTNSSITLPVPLPPGFFF-RNGPGSNPGQSNSKSFACSVDEATI 653

Query: 177 SSVYP 181
           + V P
Sbjct: 654 TDVNP 658

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
224113927	381	predicted protein [Populus trichocarpa]	0.988	0.469	0.719	2e-71
224076400	666	predicted protein [Populus trichocarpa]	0.988	0.268	0.703	1e-68
356546303	662	PREDICTED: cysteine-rich receptor-like p	0.994	0.271	0.670	4e-67
356554939	662	PREDICTED: cysteine-rich receptor-like p	0.994	0.271	0.670	4e-66
356554943	670	PREDICTED: cysteine-rich receptor-like p	0.994	0.268	0.664	2e-65
356510387	647	PREDICTED: cysteine-rich receptor-like p	0.994	0.278	0.686	8e-65
255555021	686	ATP binding protein, putative [Ricinus c	0.988	0.260	0.664	2e-64
357515489	670	S-locus lectin protein kinase family pro	0.994	0.268	0.655	1e-62
356554937	606	PREDICTED: cysteine-rich receptor-like p	0.994	0.297	0.648	2e-62
358346817	626	Cysteine-rich receptor-like protein kina	0.994	0.287	0.637	6e-62

>gi|224113927|ref|XP_002316616.1| predicted protein [Populus trichocarpa] gi|222859681|gb|EEE97228.1| predicted protein [Populus trichocarpa]

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/182 (71%), Positives = 156/182 (85%), Gaps = 3/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           MNPKISDFGMARIFGGNQ+EANTNR+VGTYGYMAPEYAM G+FS+KSDVFSFGVLL EI+
Sbjct: 201 MNPKISDFGMARIFGGNQSEANTNRIVGTYGYMAPEYAMVGLFSVKSDVFSFGVLLLEII 260

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SG++N GF+LS++G SLLT+ WKLW +G+ LELMDP+L++S V  E+L+ IHIGLLCVQE
Sbjct: 261 SGEKNVGFHLSEEGESLLTFAWKLWSDGQGLELMDPMLEKSGVATEVLRCIHIGLLCVQE 320

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           DPA RP+MSSV+ MLASDTITLP P QPAFS+GR VA  G   SS+ K CS NE+T+S +
Sbjct: 321 DPADRPTMSSVLHMLASDTITLPIPKQPAFSIGRFVAMEGQ--SSNQKVCSSNELTISVL 378

Query: 180 YP 181
            P
Sbjct: 379 SP 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076400|ref|XP_002304937.1| predicted protein [Populus trichocarpa] gi|222847901|gb|EEE85448.1| predicted protein [Populus trichocarpa]

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 128/182 (70%), Positives = 152/182 (83%), Gaps = 3/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKISDFGMARIFGGN +EANTNR+VGTYGYMAPEYAMEG+ S+KSDVFSFGVL LEI+
Sbjct: 486 MNPKISDFGMARIFGGNHSEANTNRIVGTYGYMAPEYAMEGLSSVKSDVFSFGVLMLEII 545

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SGKRN GF+LS++G SLL +TWKLW EG+ LELMD +L++S V  E+LK IHIGLLCVQE
Sbjct: 546 SGKRNGGFHLSEEGKSLLNFTWKLWSEGKGLELMDSLLEKSSVATEVLKCIHIGLLCVQE 605

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           DP  RP+MSSVVVMLA D   +P PT+PAFSVGR+VA      SS+ +  S+N++TLS+V
Sbjct: 606 DPVDRPTMSSVVVMLAGDNFKIPIPTKPAFSVGRIVAEETT--SSNQRVSSVNKVTLSNV 663

Query: 180 YP 181
            P
Sbjct: 664 LP 665

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546303|ref|XP_003541568.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 122/182 (67%), Positives = 151/182 (82%), Gaps = 2/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKISDFG+AR F   QN+ANTNRV+GTYGYM+PEYAMEG+FS+KSDVFS+GVL LEI+
Sbjct: 481 MNPKISDFGLARAFEKGQNQANTNRVMGTYGYMSPEYAMEGLFSVKSDVFSYGVLVLEII 540

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            GK+NSGFYLS+ G SL  Y WK+WC G++LELMDPVL++SC+ +E++K IHIGLLCVQE
Sbjct: 541 CGKKNSGFYLSECGQSLTLYAWKIWCAGKSLELMDPVLEKSCIESEVMKCIHIGLLCVQE 600

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           D A RP+MS+VVVMLASD ++LP P QPAFSVGRM    G   S  SK  SIN++T++++
Sbjct: 601 DAADRPTMSTVVVMLASDKMSLPEPNQPAFSVGRMTL-EGASTSKSSKNLSINDVTVTNI 659

Query: 180 YP 181
            P
Sbjct: 660 LP 661

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554939|ref|XP_003545798.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 122/182 (67%), Positives = 148/182 (81%), Gaps = 2/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKISDFG+AR F   Q +ANTNRV+GTYGYMAPEYAMEG+FS+KSDVFSFGVL LEI+
Sbjct: 481 MNPKISDFGLARAFSKGQKQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEII 540

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            GK+NSGFYLS+ G  LL Y WK+WC G+ LEL+DPVL++SC+ +E++K IHIGLLCVQE
Sbjct: 541 CGKKNSGFYLSECGQGLLLYAWKIWCAGKFLELLDPVLEESCIESEVVKCIHIGLLCVQE 600

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           D A RP+MS+VVVMLASDT+ LP P +PAFSVGRM         S +K  SIN+IT+S++
Sbjct: 601 DAADRPNMSTVVVMLASDTMVLPKPNRPAFSVGRMALGDASTSKSSNKH-SINDITISNI 659

Query: 180 YP 181
            P
Sbjct: 660 LP 661

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554943|ref|XP_003545800.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 147/182 (80%), Gaps = 2/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKISDFG+AR F   QN+ANT RV+GTYGYM+PEYAMEG+FS+KSDVFS+GVL LEI+
Sbjct: 489 MNPKISDFGLARAFEKGQNQANTKRVMGTYGYMSPEYAMEGLFSVKSDVFSYGVLVLEII 548

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            GK+NSGFYLS+ G SL  Y WKLWC G+ LEL+DPVL++SC+ +E++K IHIGLLCVQE
Sbjct: 549 CGKKNSGFYLSECGQSLTLYAWKLWCAGKCLELLDPVLEESCIESEVVKCIHIGLLCVQE 608

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           D A RP+MS+VVVMLASD + LP P QPAFSVGRM        S  SK  SIN++T+S++
Sbjct: 609 DAADRPTMSTVVVMLASDKMPLPKPNQPAFSVGRMTLEDAS-TSKSSKNLSINDVTVSNI 667

Query: 180 YP 181
            P
Sbjct: 668 LP 669

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510387|ref|XP_003523920.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  251 bits (641), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 125/182 (68%), Positives = 146/182 (80%), Gaps = 2/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           MNPKISDFG+AR FGG+Q +ANT RVVGTYGYMAPEYAMEG+FS+KSDVFSFGVLL EI+
Sbjct: 466 MNPKISDFGLARTFGGDQKQANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEII 525

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SGKR+S FYLS  G SLL Y W LWCE + LELMDP++++SCV +E+LK +HIGLLCVQE
Sbjct: 526 SGKRSSKFYLSDQGQSLLIYAWNLWCERKGLELMDPIIEKSCVRSEVLKCMHIGLLCVQE 585

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           D A RP MSSVV MLASDT++L  PT+PAFSVGR V       S+ S   S+NE T+S V
Sbjct: 586 DAADRPKMSSVVHMLASDTVSLSVPTRPAFSVGRAVTER-ECSSNTSMHYSVNEATVSEV 644

Query: 180 YP 181
            P
Sbjct: 645 IP 646

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555021|ref|XP_002518548.1| ATP binding protein, putative [Ricinus communis] gi|223542393|gb|EEF43935.1| ATP binding protein, putative [Ricinus communis]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 152/182 (83%), Gaps = 3/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           MNPKISDFGMARIFGGN +++ TNR+VGTYGYM+PEYAMEG+FS+KSD+FSFGVLL EI+
Sbjct: 506 MNPKISDFGMARIFGGNDSKS-TNRIVGTYGYMSPEYAMEGLFSMKSDIFSFGVLLLEII 564

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SG+RN+ FY+ ++G SLLT+ WKLW + + LEL+DP +  S V  E+LK +HIGLLCVQ+
Sbjct: 565 SGRRNNRFYVEEEGESLLTFAWKLWNKDQGLELLDPAVVNSSVAIEVLKCVHIGLLCVQD 624

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           DPA RP+MSSVVVMLASDTITLP P +PAFS+G+ VA S    SS+ K  S+N++TLS+V
Sbjct: 625 DPAERPTMSSVVVMLASDTITLPQPRKPAFSIGQFVARSAT-SSSNPKVSSVNQVTLSNV 683

Query: 180 YP 181
            P
Sbjct: 684 SP 685

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357515489|ref|XP_003628033.1| S-locus lectin protein kinase family protein [Medicago truncatula] gi|355522055|gb|AET02509.1| S-locus lectin protein kinase family protein [Medicago truncatula]

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 120/183 (65%), Positives = 148/183 (80%), Gaps = 3/183 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKISDFG+AR F   QN+ANT R++GTYGYMAPEYAMEGVFS+K+DVFSFGVL LEI+
Sbjct: 473 MNPKISDFGLARAFDIGQNQANTRRIMGTYGYMAPEYAMEGVFSVKTDVFSFGVLVLEII 532

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV-GAELLKYIHIGLLCVQ 118
           SGK+N+GFYLS+ G SLL YTWK WCEG  LE+MD VL +SC+   E+++ I+IGLLCVQ
Sbjct: 533 SGKKNTGFYLSEHGQSLLLYTWKKWCEGTCLEIMDSVLGKSCIDDNEVVRCINIGLLCVQ 592

Query: 119 EDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSS 178
           ED A RP+MS+VVVMLASDT+TLP P QPAFS+GRM ++      S     SIN++T+S+
Sbjct: 593 EDAADRPTMSTVVVMLASDTMTLPKPKQPAFSIGRMTSTDSSSSKSFKDP-SINDVTVSN 651

Query: 179 VYP 181
           + P
Sbjct: 652 ILP 654

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554937|ref|XP_003545797.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 118/182 (64%), Positives = 144/182 (79%), Gaps = 2/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
           MNPKISDFG+AR F   QN+ANTNR++GTYGYMAPEYAMEG+FSIKSDVFSFGVL LEI+
Sbjct: 425 MNPKISDFGLARAFENGQNQANTNRIMGTYGYMAPEYAMEGLFSIKSDVFSFGVLVLEII 484

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            GKRNSGF+LS+ G +LL YTW++WC G+ LELMDPVL+ S +  E++K I IGLLCVQE
Sbjct: 485 CGKRNSGFFLSEHGQTLLLYTWRVWCSGKCLELMDPVLENSYIANEVVKCIQIGLLCVQE 544

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
             A RP+MS+VVV LASD + LP P +PAFSVGR  +      S +SK  SIN+ ++SS+
Sbjct: 545 AAANRPTMSNVVVFLASDGMALPNPNKPAFSVGRRTSDETS-SSRNSKNISINDASISSI 603

Query: 180 YP 181
            P
Sbjct: 604 VP 605

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346817|ref|XP_003637461.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355503396|gb|AES84599.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  242 bits (617), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 2/182 (1%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           MNPKISDFG+AR F  +Q + NT RVVGTYGYMAPEYAMEG++S+KSDVFSFGVLL EI+
Sbjct: 445 MNPKISDFGLARAFEKDQCQENTRRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEII 504

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            G+RN GFYL++ G SLL Y+W LWCE ++LEL+DP+LK +    E++K IHIGLLCVQE
Sbjct: 505 CGRRNGGFYLAEHGQSLLVYSWNLWCEDKSLELLDPILKNTYTTNEVIKCIHIGLLCVQE 564

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSSV 179
           D   RP+MS+VVVMLASDT+TLP P  PAFSVGR V   G   S  S   S+NE+T++++
Sbjct: 565 DAVDRPTMSNVVVMLASDTMTLPNPNHPAFSVGRKVV-EGESTSKASNDPSVNEVTVTNI 623

Query: 180 YP 181
            P
Sbjct: 624 LP 625

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.994	0.269	0.524	5.8e-50
TAIR|locus:2121651	676	CRK8 "cysteine-rich RLK (RECEP	1.0	0.267	0.532	8.5e-49
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.983	0.209	0.587	5.2e-48
TAIR|locus:2121636	659	CRK7 "cysteine-rich RLK (RECEP	1.0	0.274	0.526	6e-48
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.983	0.211	0.564	8.3e-48
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.983	0.210	0.559	1.8e-47
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	1.0	0.270	0.524	8.8e-47
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.994	0.279	0.530	9.1e-45
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.966	0.210	0.546	1.1e-44
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.983	0.209	0.5	5.7e-44

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 97/185 (52%), Positives = 135/185 (72%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
             MNPKI+DFGMARIFG +Q E NT+R+VGTYGYM+PEYAM G +S+KSDV+SFGVL LEI+
Sbjct:   485 MNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEII 544

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
             SGK+NS FY +   H L++Y W LW  G  LEL+DP + ++C   E+++ +HIGLLCVQE
Sbjct:   545 SGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQE 604

Query:   120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPF---FSSDSKFCSINEITL 176
             DPA RP++S++V+ML S+T+TLP P QP       +    P     +S S   S+++ ++
Sbjct:   605 DPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKD-PLDTDTTSKSLLGSVDDASI 663

Query:   177 SSVYP 181
             + ++P
Sbjct:   664 TDIHP 668

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 99/186 (53%), Positives = 137/186 (73%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
             +NPKI+DFGMARIFG +Q + NT+R+VGTYGYMAPEYAM G FS+KSDV+SFGVL LEI+
Sbjct:   490 INPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEII 549

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
             SG++NS F  S     LLT+TW+LW    AL+L+DP++  +C  +E+++ IHIGLLCVQE
Sbjct:   550 SGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQE 609

Query:   120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVG----RMVASSGPFFSSDSKFCSINEIT 175
             DPA+RP++S+V +ML S+T+TLP P QP F +     +    S    ++ S   SI++  
Sbjct:   610 DPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQSSPVKDPTDSDQSTTTKSTPASIDDEL 669

Query:   176 LSSVYP 181
             ++ +YP
Sbjct:   670 ITDLYP 675

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 5.2e-48, P = 5.2e-48
 Identities = 107/182 (58%), Positives = 131/182 (71%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
             MNPKISDFGMARIFGGNQNEANT RVVGTYGYM+PEYAMEG+FS+KSDV+SFGVLL EIV
Sbjct:   666 MNPKISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIV 725

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
             SGKRN+    S+ G SL+ Y W L+  G + EL+DP ++ +C   E L+ IH+ +LCVQ+
Sbjct:   726 SGKRNTSLRSSEHG-SLIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQD 784

Query:   120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFF--SSDSKFCSINEITLS 177
               A RP+M+SV++ML SDT TL  P QP F+  R  +    F   SS     S NEIT +
Sbjct:   785 SAAERPNMASVLLMLESDTATLAAPRQPTFTSTRRNSIDVNFALDSSQQYIVSSNEITST 844

Query:   178 SV 179
              V
Sbjct:   845 VV 846

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 98/186 (52%), Positives = 134/186 (72%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
             MNPKI+DFGMARIFG +Q + NT+R+VGTYGYM+PEYAM G FS+KSDV+SFGVL LEI+
Sbjct:   473 MNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEII 532

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
             SG++N+ F  + D   L+T+ W+LW  G AL+L+DP +  SC  +E+++  HIGLLCVQE
Sbjct:   533 SGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQE 592

Query:   120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSV----GRMVASSGPFFSSDSKFCSINEIT 175
             DP +RP+MS++ VML S+T+ LP P QP F V    G     S    ++ S   SI++ +
Sbjct:   593 DPVKRPAMSTISVMLTSNTMALPAPQQPGFFVRSRPGTNRLDSDQSTTNKSVTVSIDDKS 652

Query:   176 LSSVYP 181
             +S + P
Sbjct:   653 MSDLDP 658

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 506 (183.2 bits), Expect = 8.3e-48, P = 8.3e-48
 Identities = 105/186 (56%), Positives = 130/186 (69%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
             M PKISDFGMARIFG  + EANT RVVGTYGYM+PEYAM+G+FS+KSDVFSFGVLL EI+
Sbjct:   656 MTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEII 715

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPV----LKQSCVGAELLKYIHIGLL 115
             SGKRN GFY S    +LL + W+ W EG  LE++DP+    L       E+L+ I IGLL
Sbjct:   716 SGKRNKGFYNSNRDLNLLGFVWRHWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLL 775

Query:   116 CVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGR--MVASSGPFFSSDSKFCSINE 173
             CVQE    RP MSSV+VML S+T  +P P +P F +GR  + A S      D + C++N+
Sbjct:   776 CVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCIGRSPLEADSSSSTQRDDE-CTVNQ 834

Query:   174 ITLSSV 179
             ITLS +
Sbjct:   835 ITLSVI 840

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 1.8e-47, P = 1.8e-47
 Identities = 104/186 (55%), Positives = 130/186 (69%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
             M PKISDFGMARIFG  + EANT RVVGTYGYM+PEYAM+G+FS+KSDVFSFGVLL EI+
Sbjct:   660 MTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEII 719

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPV----LKQSCVGAELLKYIHIGLL 115
             SGKRN GFY S    +LL + W+ W EG+ LE++DP+    L       E+L+ I IGLL
Sbjct:   720 SGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLL 779

Query:   116 CVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGR--MVASSGPFFSSDSKFCSINE 173
             CVQE    RP MSSV+VML S+T  +P P +P F VGR  +   S      D + C++N+
Sbjct:   780 CVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDE-CTVNQ 838

Query:   174 ITLSSV 179
             +TLS +
Sbjct:   839 VTLSVI 844

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 98/187 (52%), Positives = 132/187 (70%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
             MNPKI+DFGMARIFG +Q++ANT R+ GT+GYM+PEYAM G FS+KSDV+SFGVL LEI+
Sbjct:   482 MNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEII 541

Query:    60 SGKRNSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
             SGK+NS FY +   G +L+T+ W+LW  G  LEL+DP + +S   +E  + IHI LLCVQ
Sbjct:   542 SGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQ 601

Query:   119 EDPARRPSMSSVVVMLASDTITLPPPTQPAFSV-GRMVASSG-PFFSSDSKFC--SINEI 174
             EDPA RP + ++++ML S T TL  P  P F + GR +   G  +  S S+    SIN+ 
Sbjct:   602 EDPADRPLLPAIIMMLTSSTTTLHVPRAPGFCLSGRDLEQDGVEYTESTSRSIPGSINDA 661

Query:   175 TLSSVYP 181
             +++  YP
Sbjct:   662 SITEFYP 668

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 97/183 (53%), Positives = 123/183 (67%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
             MNPKI+DFGMARIFG +Q EA T RVVGTYGYM+PEYAM G FS+KSDV+SFGVL LEI+
Sbjct:   463 MNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEII 522

Query:    60 SGKRNSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
             SG +NS  Y + +   +L+TYTW+LW  G   EL+DP    +   +E+ + IHI LLCVQ
Sbjct:   523 SGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQ 582

Query:   119 EDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPFFSSDSKFCSINEITLSS 178
             ED   RP+MSS+V ML +  I L  P  P F        +GP   S S  CS++E +++ 
Sbjct:   583 EDAEDRPTMSSIVQMLTTSLIALAEPRPPGFFFRSKQEQAGPSIDS-STHCSVDEASITR 641

Query:   179 VYP 181
             V P
Sbjct:   642 VTP 644

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 1.1e-44, P = 1.1e-44
 Identities = 100/183 (54%), Positives = 128/183 (69%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV 59
             +NPKISDFG+ARIF GN++E +T RVVGTYGYMAPEYAM G+FS KSDVFS GV LLEIV
Sbjct:   649 LNPKISDFGLARIFQGNEDEVSTVRVVGTYGYMAPEYAMGGLFSEKSDVFSLGVILLEIV 708

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
             SG+RNS FY      +L  Y WKLW  GE + L+DPV+ + C   E+ + +H+GLLCVQ+
Sbjct:   709 SGRRNSSFYNDGQNPNLSAYAWKLWNTGEDIALVDPVIFEECFENEIRRCVHVGLLCVQD 768

Query:   120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSVGR---MVASSGPFFSSDSKFCSINEITL 176
                 RPS+++V+ ML+S+   LP P QPAF   R    V SSG    SD +  SIN ++L
Sbjct:   769 HANDRPSVATVIWMLSSENSNLPEPKQPAFIPRRGTSEVESSG---QSDPR-ASINNVSL 824

Query:   177 SSV 179
             + +
Sbjct:   825 TKI 827

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 471 (170.9 bits), Expect = 5.7e-44, P = 5.7e-44
 Identities = 91/182 (50%), Positives = 129/182 (70%)

Query:     1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
             M PKISDFGMAR+FGG+QN+ NTNRVVGT+GYM+PEYAMEG+FS+KSDV+ FGVL LEI+
Sbjct:   667 MKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEII 726

Query:    60 SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
             +GKR   F+  +D  ++  Y W+ W E  A EL+DPV++ SC   ++L+ IHI LLCVQ+
Sbjct:   727 TGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQD 786

Query:   120 DPARRPSMSSVVVMLASDTITLPPPTQPAFSV-GRMVASSGPFFSSDSKFCSINEITLSS 178
                 RP + +V++ML++D+ +LP P  P   + GR + SS    S   +  SI  +T++ 
Sbjct:   787 HADERPDIPTVILMLSNDSSSLPNPRPPTLMLRGREIESSKS--SEKDRSHSIGTVTMTQ 844

Query:   179 VY 180
             ++
Sbjct:   845 LH 846

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XI1869 hypothetical protein (382 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	181
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-15
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	9e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-13
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-11
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-10
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-09
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	9e-09
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-08
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-08
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-08
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-07
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-06
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	6e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-06
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	7e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-05
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	4e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-04
pfam11883	48	pfam11883, DUF3403, Domain of unknown function (DU	2e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-04
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	5e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	5e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	6e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	6e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	6e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	6e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	6e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	6e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	7e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	7e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	7e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	7e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	8e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	9e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.001
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.001
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.001
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.001
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.001
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.001
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.002
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.002
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.002
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	0.002
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.002
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.003
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.003
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.003
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.003
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.003
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.003
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.003
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.003
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.004
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.004
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.004
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.004
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 71.0 bits (175), Expect = 3e-15
 Identities = 47/143 (32%), Positives = 64/143 (44%), Gaps = 36/143 (25%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS- 60
           KISDFG++R ++  +     T   +    +MAPE   +G+F+ KSDV+SFGVLL EI + 
Sbjct: 145 KISDFGLSRDVYDDDYYRKKTGGKLPIR-WMAPESLKDGIFTSKSDVWSFGVLLWEIFTL 203

Query: 61  ------GKRNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHI 112
                 G  N     YL + G+ L       +C  E  ELM                   
Sbjct: 204 GATPYPGLSNEEVLEYL-RKGYRLPKPE---YCPDELYELM------------------- 240

Query: 113 GLLCVQEDPARRPSMSSVVVMLA 135
            L C Q DP  RP+ S +V  L 
Sbjct: 241 -LSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 69.5 bits (171), Expect = 9e-15
 Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 25/136 (18%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KISDFG++R    +  + +  R  G      +MAPE   EG F+ KSDV+SFGVLL EI 
Sbjct: 142 KISDFGLSR----DLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIF 197

Query: 60  S-GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           + G++    Y       +L Y       G  L         +C   EL   +   L C  
Sbjct: 198 TLGEQ---PYPGMSNEEVLEYLKN----GYRLPQPP-----NCP-PELYDLM---LQCWA 241

Query: 119 EDPARRPSMSSVVVML 134
           EDP  RP+ S +V +L
Sbjct: 242 EDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 69.1 bits (170), Expect = 1e-14
 Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 25/136 (18%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KISDFG++R    +  + +  +V G      +MAPE   EG F+ KSDV+SFGVLL EI 
Sbjct: 143 KISDFGLSR----DLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIF 198

Query: 60  S-GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           + G+     Y       +L Y  K    G  L         +C   EL K +   L C  
Sbjct: 199 TLGEE---PYPGMSNAEVLEYLKK----GYRLPKPP-----NCP-PELYKLM---LQCWA 242

Query: 119 EDPARRPSMSSVVVML 134
           EDP  RP+ S +V +L
Sbjct: 243 EDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 67.9 bits (167), Expect = 4e-14
 Identities = 45/141 (31%), Positives = 59/141 (41%), Gaps = 34/141 (24%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS- 60
           KISDFG++R I+  +         +    +MAPE   +G F+ KSDV+SFGVLL EI + 
Sbjct: 142 KISDFGLSRDIYEDDYYRKRGGGKL-PIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Query: 61  ------GKRNSGFYLS-KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                 G  N       +DG+ L        C  E  ELM                    
Sbjct: 201 GEQPYPGMSNEEVLELLEDGYRLPRP---ENCPDELYELM-------------------- 237

Query: 114 LLCVQEDPARRPSMSSVVVML 134
           L C   DP  RP+ S +V  L
Sbjct: 238 LQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 66.4 bits (163), Expect = 1e-13
 Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 17/124 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K++DFG+AR     +        VGT  YMAPE  +   +    D++S GV+L E+++GK
Sbjct: 137 KLADFGLARQLDPGEK---LTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK 193

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                +    G   L   +K   + +      P    S    +L++     LL    DP 
Sbjct: 194 P---PF---PGDDQLLELFKKIGKPK-PPFPPPEWDISPEAKDLIR----KLLVK--DPE 240

Query: 123 RRPS 126
           +R +
Sbjct: 241 KRLT 244

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 34/143 (23%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-YAMEGVFSIKSDVFSFGVLL-EI 58
              KI+DFG+A+    + +   T   VGT  YMAPE       +  K DV+S GV+L E+
Sbjct: 135 GVVKIADFGLAKKLLKSSSSLTT--FVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYEL 192

Query: 59  VSGK--------RNSGFYLSKDGHSLLTYTWKLWCEG--EALELMDPVLKQSCVGAELLK 108
           ++GK         +    + +     L +    W  G  EA +L+               
Sbjct: 193 LTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIK-------------- 238

Query: 109 YIHIGLLCVQEDPARRPSMSSVV 131
                 L    DP++RP+   ++
Sbjct: 239 ----KCLNK--DPSKRPTAEEIL 255

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 65.0 bits (159), Expect = 3e-13
 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL 56
             K++DFG++++   +++   T  +VGT  YMAPE  +    +S KSD++S GV+L
Sbjct: 131 KVKLADFGLSKLLTSDKSLLKT--IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 15/124 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSGK 62
           K++DFG A+  G  +    T  V GT  +MAPE      +   +D++S G  ++E+ +GK
Sbjct: 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
               +    +  + L   +K+   GE  E+ +     S    + L        C++ DP 
Sbjct: 201 PP--WSELGNPMAAL---YKIGSSGEPPEIPE---HLSEEAKDFL------RKCLRRDPK 246

Query: 123 RRPS 126
           +RP+
Sbjct: 247 KRPT 250

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K++DFG+AR+   +  EA      G      + APE A+   FSIKSDV+SFG+LL EIV
Sbjct: 143 KVADFGLARVIKEDIYEARE----GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIV 198

Query: 60  S 60
           +
Sbjct: 199 T 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 56.6 bits (137), Expect = 4e-10
 Identities = 44/147 (29%), Positives = 60/147 (40%), Gaps = 42/147 (28%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT----YGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
           KI DFGM R    +  E +  R  G       +MAPE   +GVF+ KSDV+SFGV+L E+
Sbjct: 159 KIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214

Query: 59  VS-------GKRNS--GFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKY 109
            +       G  N     ++   GH  L       C  + LELM                
Sbjct: 215 ATLAEQPYQGLSNEEVLKFVIDGGHLDLPEN----CPDKLLELM---------------- 254

Query: 110 IHIGLLCVQEDPARRPSMSSVVVMLAS 136
                +C Q +P  RP+   +V  L  
Sbjct: 255 ----RMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KI+DFG+AR+   ++  A      G      + APE A  G F+IKSDV+SFG+LL EIV
Sbjct: 143 KIADFGLARLIEDDEYTARE----GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIV 198

Query: 60  S 60
           +
Sbjct: 199 T 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 21/133 (15%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+++I G   + A T  VVGT  YM+PE   +GV ++ KSD+++ G VL E+++ 
Sbjct: 141 KLGDFGISKILGSEYSMAET--VVGTPYYMSPELC-QGVKYNFKSDIWALGCVLYELLTL 197

Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
           KR      + D  + L    K+        +       S   +EL+  +H     +Q+DP
Sbjct: 198 KR------TFDATNPLNLVVKIVQGNYTPVV-------SVYSSELISLVH---SLLQQDP 241

Query: 122 ARRPSMSSVVVML 134
            +RP+   V+   
Sbjct: 242 EKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV 59
              KI+DFG++++     ++ NT   VGT  YM+PE      +S  +D++S G+ LLE  
Sbjct: 137 GEVKIADFGISKVLENTLDQCNTF--VGTVTYMSPERIQGESYSYAADIWSLGLTLLECA 194

Query: 60  SGKRNSGF-YLSKDGHSLLTYTWKLWCE---GEALELMDPVLKQSCVGAELLKYIHIGLL 115
            GK    F +L     S     ++L      G    L            E   +I     
Sbjct: 195 LGK----FPFLPPGQPSF----FELMQAICDGPPPSLPA-----EEFSPEFRDFIS---A 238

Query: 116 CVQEDPARRPS 126
           C+Q+DP +RPS
Sbjct: 239 CLQKDPKKRPS 249

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K++DFG+A+      +  NT    GT  Y+APE  +   +    D +S GVLL E+++GK
Sbjct: 133 KLTDFGLAKELSSEGSRTNT--FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 33/135 (24%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           K+ DFG++++     + A T  VVGT  Y++PE   +   ++ KSD++S G +L E+ + 
Sbjct: 143 KLGDFGISKVLSSTVDLAKT--VVGTPYYLSPE-LCQNKPYNYKSDIWSLGCVLYELCTL 199

Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQ------SCVGAELLKYIHIGLL 115
           K    F    +G +L             LEL   +LK       S   +EL    ++   
Sbjct: 200 KH--PF----EGENL-------------LELALKILKGQYPPIPSQYSSEL---RNLVSS 237

Query: 116 CVQEDPARRPSMSSV 130
            +Q+DP  RPS++ +
Sbjct: 238 LLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 34/132 (25%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSGK 62
           K+ DFG++       +    N +VGT  +MAPE      +  K+D++S G   +E+  GK
Sbjct: 138 KLIDFGLSAQL---SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Query: 63  ---RNSG-----FYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGL 114
                       F ++ +G   L    K W +    E  D + K                
Sbjct: 195 PPYSELPPMKALFKIATNGPPGLRNPEK-WSD----EFKDFLKK---------------- 233

Query: 115 LCVQEDPARRPS 126
            C+Q++P +RP+
Sbjct: 234 -CLQKNPEKRPT 244

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
            N K+ DFG+A+I G + + A T   VGT  YM+PE      +  KSD++S G ++ E+ 
Sbjct: 147 NNVKLGDFGLAKILGHDSSFAKT--YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC 204

Query: 60  SGK 62
           +  
Sbjct: 205 ALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           N KI D G+A++   N N ANT  +VGT  Y++PE   +  ++ KSDV++ GV+L E  +
Sbjct: 139 NVKIGDLGVAKLLSDNTNFANT--IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT 196

Query: 61  GK 62
           GK
Sbjct: 197 GK 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 3/58 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K++DFG+AR+   +   ++  ++   Y + APE A  G FS KSDV+SFG+LL E+ +
Sbjct: 144 KVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K+ D G+ R F      A++  +VGT  YM+PE   E  ++ KSD++S G LL  ++  +
Sbjct: 146 KLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203

Query: 64  NSGFYLSKDGHSLLTYTWKLWCEGEALELMD-PVLKQSCVGAELLKYIHIGLLCVQEDPA 122
            S FY  K           L+   + +E  D P L       EL + ++   +C+  DP 
Sbjct: 204 -SPFYGDK---------MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN---MCINPDPE 250

Query: 123 RRPSMSSVVVM 133
           +RP ++ V  +
Sbjct: 251 KRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 142 KIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG 200

Query: 63  R 63
           R
Sbjct: 201 R 201

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFGMAR I+  +       R +    +M PE  ++G+F+ K+DV+SFGVLL EI S
Sbjct: 159 KIADFGMARDIYRASYYRKG-GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 50.4 bits (121), Expect = 7e-08
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
            I+DF +A     +     T    GT GYMAPE      +S+  D +S GV   E + GK
Sbjct: 140 HITDFNIATKVTPDTL---TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196

Query: 63  R 63
           R
Sbjct: 197 R 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL E+V+  
Sbjct: 142 KIADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200

Query: 63  R 63
           R
Sbjct: 201 R 201

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 10/64 (15%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K+SDFG+A+       EA+  +  G     + APE   E  FS KSDV+SFG+LL EI S
Sbjct: 142 KVSDFGLAK-------EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Query: 61  GKRN 64
             R 
Sbjct: 195 FGRV 198

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 33/133 (24%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSGK 62
           K+ DFG++       + A T   VGT  YMAPE      +S+KSD++S G  L+E+ +G+
Sbjct: 141 KLCDFGVSGQL--VNSLAKTF--VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEA--LELMD-------PVLKQSCVGAELLKYIHIG 113
                           + +    +      EL+        P L       +   +++  
Sbjct: 197 ----------------FPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVN-- 238

Query: 114 LLCVQEDPARRPS 126
            LC+ +DP  RPS
Sbjct: 239 -LCLIKDPRERPS 250

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           N +ISD G+A    G +         GT GYMAPE     V+    D F+ G  L E+++
Sbjct: 133 NVRISDLGLAVELKGGKK---IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIA 189

Query: 61  GK 62
           G+
Sbjct: 190 GR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 39/140 (27%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-------------YAMEGVFSIKSD 48
           N KI+DFG++RI    Q     N  VGT  YM+PE             YA         D
Sbjct: 206 NVKIADFGVSRIL--AQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYA--------GD 255

Query: 49  VFSFGV-LLEIVSGKRNSGFYLSKDGHSLLTYTW-KLWCEGEALELMDPVLKQSCVGAEL 106
           ++S GV +LE   G+    F + + G       W  L C   A+ +  P    +    E 
Sbjct: 256 IWSLGVSILEFYLGR--FPFGVGRQG------DWASLMC---AICMSQPPEAPATASREF 304

Query: 107 LKYIHIGLLCVQEDPARRPS 126
             +I     C+Q +PA+R S
Sbjct: 305 RHFIS---CCLQREPAKRWS 321

Length = 353

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 20/131 (15%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVLL EI +  
Sbjct: 172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLG 231

Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
           G    G  + +         +KL  EG  +E   P      +      Y H+   C  E 
Sbjct: 232 GSPYPGIPVEE--------LFKLLKEGYRME--KPQNCTQEL------Y-HLMRDCWHEV 274

Query: 121 PARRPSMSSVV 131
           P++RP+   +V
Sbjct: 275 PSQRPTFKQLV 285

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL E+V+  
Sbjct: 142 KIADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200

Query: 63  R 63
           R
Sbjct: 201 R 201

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.8 bits (112), Expect = 6e-07
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 12/138 (8%)

Query: 2   NPKISDFGMARIFGGNQNEAN----TNRVVGTYGYMAPEYAMEGVF---SIKSDVFSFGV 54
             K+ DFG+A++     + ++     +  VGT GYMAPE  +       S  SD++S G+
Sbjct: 140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGI 199

Query: 55  LL-EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
            L E+++G     F   K+  +    T K+  E      +   L  S           + 
Sbjct: 200 TLYELLTGL--PPFEGEKNSSATSQ-TLKIILELP-TPSLASPLSPSNPELISKAASDLL 255

Query: 114 LLCVQEDPARRPSMSSVV 131
              + +DP  R S SS +
Sbjct: 256 KKLLAKDPKNRLSSSSDL 273

Length = 384

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 47.3 bits (112), Expect = 8e-07
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 142 KIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200

Query: 63  R 63
           R
Sbjct: 201 R 201

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 16/128 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K+ D G+ R F      A++  +VGT  YM+PE   E  ++ KSD++S G LL  ++  +
Sbjct: 146 KLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203

Query: 64  NSGFYLSKDGHSLLTYTWKL-WCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
            S FY   D  +L +   K+  C+        P L       EL   +     C+  DP 
Sbjct: 204 -SPFY--GDKMNLYSLCKKIEKCDY-------PPLPADHYSEELRDLVSR---CINPDPE 250

Query: 123 RRPSMSSV 130
           +RP +S V
Sbjct: 251 KRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGK 62
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K
Sbjct: 142 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 199

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KISDFG++R I+  +     +  ++    +M PE  + G F+ +SD++SFGV+L EI S
Sbjct: 164 KISDFGLSRDIYSADYYRVQSKSLLPVR-WMPPEAILYGKFTTESDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+
Sbjct: 143 KIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLYEIVT 199

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 16/128 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K+ D G+ R F      A++  +VGT  YM+PE   E  ++ KSD++S G LL  ++  +
Sbjct: 146 KLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203

Query: 64  NSGFYLSKDGHSLLTYTWKL-WCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
            S FY   D  +L +   K+  C+   L    P    S    EL+       +C+  DP 
Sbjct: 204 -SPFY--GDKMNLFSLCQKIEQCDYPPL----PTEHYSEKLRELVS------MCIYPDPD 250

Query: 123 RRPSMSSV 130
           +RP +  V
Sbjct: 251 QRPDIGYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++ +SDV+SFGVLL EI S
Sbjct: 213 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR I+  +        ++    +MAPE  ++G F+ +SDV+SFGVL+ EI++
Sbjct: 151 KIGDFGLARDIYKSDYYRKEGEGLLPVR-WMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 33/143 (23%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-G 61
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+LL EI S G
Sbjct: 181 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 240

Query: 62  KR-------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY L K+G+ +           E  ++M     ++             
Sbjct: 241 SNPYPGMPVDSKFYKLIKEGYRMAQ---PEHAPAEIYDIM-----KT------------- 279

Query: 114 LLCVQEDPARRPSMSSVVVMLAS 136
             C   DP +RP+   +V ++  
Sbjct: 280 --CWDADPLKRPTFKQIVQLIGK 300

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 23/139 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KISDFGM+R  G   ++       G +   + APE    G FS KSDV+S+GV L E  S
Sbjct: 135 KISDFGMSRALGAG-SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193

Query: 61  -GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIH-IGLLCVQ 118
            G +    Y    G              E + +++   +      E  + I+ I L C +
Sbjct: 194 YGAKP---YGEMKG-------------AEVIAMLESGERLPR-PEECPQEIYSIMLSCWK 236

Query: 119 EDPARRPSMSSVVVMLASD 137
             P  RP+ S +      D
Sbjct: 237 YRPEDRPTFSELESTFRRD 255

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFG-VLLEIVSG 61
           K++DFG+AR +    +   TNRV+ T  Y  PE  +    +  + D++S G +L E+  G
Sbjct: 140 KLADFGLARPYTKRNSADYTNRVI-TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG 198

Query: 62  K 62
           K
Sbjct: 199 K 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 19/81 (23%)

Query: 1   MNPKISDFGMARIFGGNQ------------------NEANTNRVVGTYGYMAPEYAMEGV 42
           M+ KI+DFG A++   N                   N       VGT  Y++PE   E  
Sbjct: 139 MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP 198

Query: 43  FSIKSDVFSFGVLL-EIVSGK 62
               SD+++ G ++ ++++GK
Sbjct: 199 AGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 45.2 bits (107), Expect = 6e-06
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 33/141 (23%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-G 61
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S G
Sbjct: 252 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 311

Query: 62  KR-------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
           K        NS FY + K G+                       + S       +   I 
Sbjct: 312 KSPYPGILVNSKFYKMVKRGY-----------------------QMSRPDFAPPEIYSIM 348

Query: 114 LLCVQEDPARRPSMSSVVVML 134
            +C   +P  RP+ S +  ++
Sbjct: 349 KMCWNLEPTERPTFSQISQLI 369

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-G 61
           KI+DFG+A++   ++ E +         +MA E  +  +++ KSDV+S+GV + E+++ G
Sbjct: 149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFG 208

Query: 62  KR 63
            +
Sbjct: 209 AK 210

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 44.9 bits (106), Expect = 7e-06
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 33/141 (23%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-G 61
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+LL EI S G
Sbjct: 254 KICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 313

Query: 62  KR-------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY + K+G+ +L+                      C  +E+   +   
Sbjct: 314 SSPYPGMPVDSKFYKMIKEGYRMLS--------------------PECAPSEMYDIMKS- 352

Query: 114 LLCVQEDPARRPSMSSVVVML 134
             C   DP +RP+   +V ++
Sbjct: 353 --CWDADPLKRPTFKQIVQLI 371

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           +ISD G+A  F   +  A+    VGT+GYMAPE   +GV +   +D FS G +L +++ G
Sbjct: 137 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192

Query: 62  KRNSGFYLSKDGHSLLTYT 80
                 + +KD H +   T
Sbjct: 193 HSPFRQHKTKDKHEIDRMT 211

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 4/61 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSGK 62
           KI DFG+++I   ++++A T  VVGT  Y++PE      ++ KSD+++ G VL E+ S K
Sbjct: 142 KIGDFGISKILS-SKSKAYT--VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLK 198

Query: 63  R 63
           R
Sbjct: 199 R 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 15/75 (20%)

Query: 4   KISDFGMARIFGGNQNEANTN---RVVGT----YGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFGM+R       +  T    RV G       +M PE  M   F+ +SDV+SFGV+L
Sbjct: 162 KIGDFGMSR-------DVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL 214

Query: 57  -EIVSGKRNSGFYLS 70
            EI +  +   + LS
Sbjct: 215 WEIFTYGKQPWYGLS 229

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++    G    +  +  VGT  YM+PE    G +++KSDV+S G+ ++E+  GK
Sbjct: 144 KLCDFGVS----GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 29/139 (20%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+SDFG+AR+        + +++     + APE      FS KSDV+S+GVLL E+ S  
Sbjct: 140 KVSDFGLARV---GSMGVDNSKL--PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG 194

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALE---LMDPVLKQSCVGAELLKYIHIGLL-CVQ 118
           R     +S                 E +E    M+P   + C        +++ +  C +
Sbjct: 195 RAPYPKMSLKEVK------------ECVEKGYRMEP--PEGCPAD-----VYVLMTSCWE 235

Query: 119 EDPARRPSMSSVVVMLASD 137
            +P +RPS   +   L  +
Sbjct: 236 TEPKKRPSFHKLREKLEKE 254

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVS 60
             K++DFG++        + NT  V+GT  +MAPE   E  ++ K+D++S G+  +E+  
Sbjct: 137 QAKLADFGVSGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE 194

Query: 61  GK 62
           GK
Sbjct: 195 GK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSG 61
           KISDFGM+R   G     +         + APE    G ++ +SDV+S+G+LL E  S 
Sbjct: 133 KISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 33/134 (24%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGV-LLEIV 59
           N K+ DFG+A +   NQN +  +  VGT  +MAPE   EG  +  K+D++S G+ + E+ 
Sbjct: 139 NVKLCDFGVAALL--NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMA 196

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMD-------PVLKQSCVGAELLKYIHI 112
           +G                      + + +A   M        P L+ +     L +++  
Sbjct: 197 TGN-------------------PPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFV-- 235

Query: 113 GLLCVQEDPARRPS 126
              C+ E+P  R S
Sbjct: 236 -AACLDEEPKERLS 248

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFG+AR    +Q  ++     GT     +  PE      FS KSDV+SFGVL+ E+ 
Sbjct: 140 KVSDFGLARYVLDDQYTSSQ----GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVF 195

Query: 60  SG 61
           S 
Sbjct: 196 SE 197

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KISDFG+A++   +++            + Y APE      FS  SDV+SFGV L
Sbjct: 149 KISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APECLRTSKFSSASDVWSFGVTL 202

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-YAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K++DFG+A        +  +  VVGT  +MAPE   M G  S  SD++S G  ++E+++G
Sbjct: 139 KLADFGVATKLNDVSKDDAS--VVGTPYWMAPEVIEMSGA-STASDIWSLGCTVIELLTG 195

Query: 62  K 62
            
Sbjct: 196 N 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 19/134 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI DFG+AR    + +            +MAPE   + V++ +SDV+SFGVLL EI S  
Sbjct: 214 KICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG 273

Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
                G  ++++    L    ++     A E   P + +            I L C Q D
Sbjct: 274 ASPYPGVQINEEFCQRLKDGTRM----RAPENATPEIYR------------IMLACWQGD 317

Query: 121 PARRPSMSSVVVML 134
           P  RP+ S++V +L
Sbjct: 318 PKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 219 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++     +   A T    GT  YMAPE      +SI SDV+S G+ LLE+   +
Sbjct: 145 KLCDFGVSGELVNSL--AGT--FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KISDFG++R      +    ++      +MA E   + +++ +SDV+SFGVLL EIV+
Sbjct: 167 KISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL EI +
Sbjct: 144 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+SDFG+ +     Q+            + APE   E  FS KSDV+SFG+LL EI S  
Sbjct: 142 KVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196

Query: 63  R 63
           R
Sbjct: 197 R 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 19/125 (15%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K++DFG A      +++ N+  VVGT  +MAPE      +  K D++S G++  E+  G+
Sbjct: 156 KLADFGFAAQLTKEKSKRNS--VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLK-QSCVGAELLKYIHIGLLCVQEDP 121
                YL +     L                 P LK       E   +++    C+ +DP
Sbjct: 214 PP---YLREPPLRALFLITTKGI---------PPLKNPEKWSPEFKDFLN---KCLVKDP 258

Query: 122 ARRPS 126
            +RPS
Sbjct: 259 EKRPS 263

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 29/104 (27%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFGM R    +Q  ++T    GT     + +PE      +S KSDV+SFGVL+ E+ 
Sbjct: 140 KVSDFGMTRFVLDDQYTSST----GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVF 195

Query: 60  SGKR---------------NSGFYL------SKDGHSLLTYTWK 82
           S  +               N+GF L      S+  + L+ + WK
Sbjct: 196 SEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWK 239

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 11/67 (16%)

Query: 4   KISDFGMAR----IFGGNQNEANTNRVVGTYGYMAPE--YAMEGVFSIKSDVFSFG-VLL 56
           KISDFG+++    I+  +QN      + G+  +MAPE  ++    +S K D++S G V+L
Sbjct: 148 KISDFGISKKSDDIYDNDQN----MSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL 203

Query: 57  EIVSGKR 63
           E+ +G+R
Sbjct: 204 EMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 15/25 (60%), Positives = 19/25 (76%)

Query: 32  YMAPEYAMEGVFSIKSDVFSFGVLL 56
           ++APE   E  FS KSDV+SFGVL+
Sbjct: 184 WLAPEAVQEDDFSTKSDVWSFGVLM 208

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           +ISD G+A  F   +  A+    VGT+GYMAPE   +G  +   +D FS G +L +++ G
Sbjct: 137 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192

Query: 62  KRNSGFYLSKDGHSL 76
                 + +KD H +
Sbjct: 193 HSPFRQHKTKDKHEI 207

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 7/62 (11%)

Query: 4   KISDFGMAR--IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFGM +  I GG      T+   GT  Y+APE      +    D ++ GVLL E+++
Sbjct: 136 KIADFGMCKEGILGGVT----TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191

Query: 61  GK 62
           G+
Sbjct: 192 GQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403)

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 9/47 (19%)

Query: 136 SDTITLPPPTQPAFSVGRM-----VASSGPFFSSDSKFCSINEITLS 177
           S+T  +P P QP F VGR       +SS     S     ++N++T+S
Sbjct: 1   SETTEIPQPKQPGFCVGRSPYETDSSSSTQRDES----WTVNQVTVS 43

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 50 amino acids in length. This domain is found associated with pfam00069, pfam08276, pfam00954, pfam01453. Length = 48

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVG---TYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFG+ ++   ++ E    R  G    + Y APE   E  FS+ SDV+SFGV+L
Sbjct: 148 KIGDFGLTKVLPQDK-EYYKVREPGESPIFWY-APESLTESKFSVASDVWSFGVVL 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 17/89 (19%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI DFG+AR    + N  +         +MAPE   + +++  SDV+S+G+LL EI S  
Sbjct: 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLG 336

Query: 61  --------------GKRNSGFYLSKDGHS 75
                          K  SG+ ++K  H+
Sbjct: 337 GTPYPGMIVDSTFYNKIKSGYRMAKPDHA 365

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI +  
Sbjct: 177 KIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 236

Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 237 GSPYPGIPVEELFKLLKEGHRM 258

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%)

Query: 4   KISDFGMAR--IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFGM +  + G    +A T    GT  Y+APE  +   ++   D +SFGVLL E++ 
Sbjct: 136 KIADFGMCKENMLG----DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI 191

Query: 61  GK 62
           G+
Sbjct: 192 GQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 21/128 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++       + A T   VGT  YMAPE      + I SDV+S G+  +E+  G 
Sbjct: 135 KLCDFGVSTQL--VNSIAKT--YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG- 189

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC----VGAELLKYIHIGLLCVQ 118
           R     + K+  SL+            L+L+  ++ +      VG    K++H    C++
Sbjct: 190 RFPYPQIQKNQGSLM-----------PLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMR 238

Query: 119 EDPARRPS 126
           + P  RP+
Sbjct: 239 KQPKERPA 246

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 21/53 (39%), Positives = 29/53 (54%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFGM R            + +    +M+PE   +GVF+  SDV+SFGV+L
Sbjct: 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 211

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK 62
           K++DFG++       ++ NT   VGT  +MAPE   +  +  K+D++S G+  +E+  G+
Sbjct: 138 KLADFGVSGQLTSTMSKRNT--FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 11/83 (13%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS- 60
           KI+DFG+AR I   +  +  TN  +    +MAPE   + +++ +SDV+SFGVLL EI + 
Sbjct: 180 KIADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 238

Query: 61  -GKRNSG------FYLSKDGHSL 76
            G    G      F L K+GH +
Sbjct: 239 GGSPYPGVPVEELFKLLKEGHRM 261

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++    G   ++  N  VGT  YM+PE      ++++SD++S G+ L+E+  G+
Sbjct: 140 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 4   KISDFGMAR--IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI+DFGM +  + G    E   +   GT  Y+APE      ++   D +SFGVLL
Sbjct: 136 KIADFGMCKENMNG----EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLL 186

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 21/128 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI D G++++    +N A T   +GT  YMAPE      +S KSD++S G LL E+ +  
Sbjct: 143 KIGDLGISKVL--KKNMAKT--QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA 198

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                    +  S+    +K+   G+      P+        +L  +I      +Q  P 
Sbjct: 199 ------PPFEARSMQDLRYKV-QRGKY----PPI--PPIYSQDLQNFIR---SMLQVKPK 242

Query: 123 RRPSMSSV 130
            RP+   +
Sbjct: 243 LRPNCDKI 250

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 18/136 (13%)

Query: 4   KISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+ R    N++      +  V  + + APE      FS  SDV+ FGV L E+ +
Sbjct: 137 KIGDFGLMRALPQNEDHYVMEEHLKV-PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
                   LS  G  +L    K+  EGE LE  +     +C         ++ L C   +
Sbjct: 196 YGEEPWAGLS--GSQILK---KIDKEGERLERPE-----ACP----QDIYNVMLQCWAHN 241

Query: 121 PARRPSMSSVVVMLAS 136
           PA RP+ +++   L  
Sbjct: 242 PADRPTFAALREFLPE 257

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 3   PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSG 61
            K+ DFG A+     Q    T    GT  Y+APE  +   +    D +S G+LL E+++G
Sbjct: 132 VKLVDFGFAKKLKSGQK---TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTG 188

Query: 62  K 62
           +
Sbjct: 189 R 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 4   KISDFG------MARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K++DFG      + R    N +E    R+VGT  Y+APE  +    S   D +S G +L 
Sbjct: 133 KLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILY 192

Query: 57  EIVSG 61
           E + G
Sbjct: 193 EFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.1 bits (91), Expect = 5e-04
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFG++R+  G+ + A T    GT  YM+PE      +  KSD++S G +L
Sbjct: 145 KIGDFGVSRLLMGSCDLATT--FTGTPYYMSPEALKHQGYDSKSDIWSLGCIL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S
Sbjct: 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVLL EI +  
Sbjct: 174 KIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLG 233

Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 234 GSPYPGIPVEELFKLLKEGHRM 255

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVS 60
           N ++SD G+A      +      +  GT GYMAPE   E  +S   D F+ G  + E+V+
Sbjct: 133 NCRLSDLGLAVELKDGKT---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA 189

Query: 61  GK 62
           G+
Sbjct: 190 GR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 7/57 (12%)

Query: 4   KISDFGMARIFGGNQN--EANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KISDFG+++  G ++N  +A T+   G +   + APE      FS KSDV+SFGVL+
Sbjct: 135 KISDFGLSKALGADENYYKAKTH---GKWPVKWYAPECMNYYKFSSKSDVWSFGVLM 188

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 22/161 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+ DFG ++++    ++       GT  Y+APE      +S K+D+FS GVLL E+++ K
Sbjct: 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
           R        DG ++     K    G    L   +  +       ++ I   LL    DP 
Sbjct: 243 R------PFDGENMEEVMHKT-LAGRYDPLPPSISPE-------MQEIVTALLS--SDPK 286

Query: 123 RRPSMSSVVVM----LASDTITLPPPTQPAFSVG-RMVASS 158
           RRPS S ++ M    L    +     TQP FS   R   S 
Sbjct: 287 RRPSSSKLLNMPICKLFISGLLEIVQTQPGFSGPLRDTISR 327

Length = 496

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 28/141 (19%)

Query: 1   MNPKISDFGMAR------IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           M  KI+DFG++R       +  ++N+A   R      +M PE      ++ +SDV+++GV
Sbjct: 167 MVVKIADFGLSRNIYSADYYKASENDAIPIR------WMPPESIFYNRYTTESDVWAYGV 220

Query: 55  LL-EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
           +L EI S      + ++   H  + Y  +   +G  L         SC     L+  ++ 
Sbjct: 221 VLWEIFSYGMQPYYGMA---HEEVIYYVR---DGNVL---------SCPDNCPLELYNLM 265

Query: 114 LLCVQEDPARRPSMSSVVVML 134
            LC  + P+ RPS +S+  +L
Sbjct: 266 RLCWSKLPSDRPSFASINRIL 286

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 53/149 (35%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG--YMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG++R       E    + +G     +MA E     V++  SDV+S+GVLL EIVS
Sbjct: 164 KIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218

Query: 61  ---------------GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAE 105
                           K   G+ L K           L C+ E  +LM            
Sbjct: 219 LGGTPYCGMTCAELYEKLPQGYRLEK----------PLNCDDEVYDLMRQ---------- 258

Query: 106 LLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                     C +E P  RPS + ++V L
Sbjct: 259 ----------CWREKPYERPSFAQILVSL 277

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 7/62 (11%)

Query: 4   KISDFGMAR--IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFGM +  +FG   N A+T    GT  Y+APE      ++   D +SFGVLL E++ 
Sbjct: 136 KIADFGMCKENVFG--DNRAST--FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI 191

Query: 61  GK 62
           G+
Sbjct: 192 GQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 20/136 (14%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS- 60
           KISD G++R I+  +        ++    +M PE  M G FS  SD++SFGV+L EI S 
Sbjct: 164 KISDLGLSREIYSADYYRVQPKSLLPIR-WMPPEAIMYGKFSSDSDIWSFGVVLWEIFSF 222

Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
           G +    + +++   ++     L C  +    M  ++ +                C QE 
Sbjct: 223 GLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTE----------------CWQEG 266

Query: 121 PARRPSMSSVVVMLAS 136
           P+RRP    +   L S
Sbjct: 267 PSRRPRFKDIHTRLRS 282

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFG-VLLEIVSG 61
           K++DFG+AR FG       T+ VV T  Y APE  + +  +S   D++S G +  E++S 
Sbjct: 138 KLADFGLARSFGS-PVRPYTHYVV-TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSR 195

Query: 62  K 62
           +
Sbjct: 196 R 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 38.9 bits (90), Expect = 7e-04
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++    G   ++  N  VGT  YM+PE      +S++SD++S G+ L+E+  G+
Sbjct: 144 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.8 bits (90), Expect = 7e-04
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFG+AR    + N  +         +MAPE     +++  SDV+SFG+LL
Sbjct: 279 KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILL 331

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 38.6 bits (91), Expect = 7e-04
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 16/67 (23%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-------YAMEGVFSIKSDVFSFG-VL 55
           K++DFG+AR FG       T+ VV T  Y APE       Y      S   D++S G + 
Sbjct: 138 KLADFGLARAFGIPLR-TYTHEVV-TLWYRAPEILLGSKHY------STAVDIWSVGCIF 189

Query: 56  LEIVSGK 62
            E+++GK
Sbjct: 190 AEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 38.5 bits (90), Expect = 7e-04
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)

Query: 4   KISDFGM-ARIFGGNQNEANT-NRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEI 58
           KI+DFG+ A +  G           VGT  +MAPE  ME V  +  K+D++SFG+  +E+
Sbjct: 142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPE-VMEQVHGYDFKADIWSFGITAIEL 200

Query: 59  VSGK 62
            +G 
Sbjct: 201 ATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 9/62 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT----YGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
           KI+DFGM+R    N   ++  RV G       +MA E  + G F+ KSDV++FGV L EI
Sbjct: 170 KIADFGMSR----NLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225

Query: 59  VS 60
           ++
Sbjct: 226 LT 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.5 bits (89), Expect = 9e-04
 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)

Query: 1   MNPKISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
           +N KISD G+ R ++  +  +   N ++    +M+PE  M G FSI SD++S+GV+L E+
Sbjct: 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIR-WMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Query: 59  VS 60
            S
Sbjct: 220 FS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 38.5 bits (89), Expect = 9e-04
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK 62
           K++DFG+A      Q + NT   VGT  +MAPE   +  +  K+D++S G+  +E+  G+
Sbjct: 141 KLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 7/62 (11%)

Query: 4   KISDFGMAR--IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFGM +  IFGG      T    GT  Y+APE      +    D ++FGVLL E+++
Sbjct: 141 KIADFGMCKENIFGG----KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 196

Query: 61  GK 62
           G+
Sbjct: 197 GQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM+R            R +    +M PE  +   F+ +SD++SFGV+L EI +  
Sbjct: 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYG 221

Query: 63  RNSGFYLS 70
           +   + LS
Sbjct: 222 KQPWYQLS 229

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSG 61
           KI DFGM+R ++  +      + ++    +M PE  M   F+ +SDV+SFGV+L EI + 
Sbjct: 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFTY 221

Query: 62  KRNSGFYLS 70
            +   F LS
Sbjct: 222 GKQPWFQLS 230

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI+DFG+AR+  G++ E N +       +MA E      F+ +SDV+S+GV +
Sbjct: 149 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 201

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 9/82 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI+DFG+AR          T+       +MAPE   + V++ +SDV+SFG+L+ EI +  
Sbjct: 174 KIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLG 233

Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L ++GH +
Sbjct: 234 GSPYPGIPVEELFKLLREGHRM 255

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-G 61
           K+SDFG++R    ++    T        + APE      F+  SDV+SFG+++ E++S G
Sbjct: 146 KVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYG 205

Query: 62  KR 63
           +R
Sbjct: 206 ER 207

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG--YMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG++R       E    + +G     +MA E     V++ KSDV+SFGVLL EIVS
Sbjct: 159 KIADFGLSR-----GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K+ D G+AR+     + A+T  ++GT  YM+PE      ++ KSDV++ G  +  ++  +
Sbjct: 142 KVGDLGIARVLENQCDMAST--LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK 199

Query: 64  NSGFYLSKDGHSLL 77
           ++  + +KD +SL+
Sbjct: 200 HA--FNAKDMNSLV 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK 62
           K++DFG+A      Q + NT   VGT  +MAPE   +  +  K+D++S G+  +E+  G+
Sbjct: 141 KLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 5/64 (7%)

Query: 4   KISDFGMARIFGGN--QNEANTNR--VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEI 58
           KISDFG+++    N    + N  R  + G+  +MAPE   +  ++ K+D++S G L +E+
Sbjct: 146 KISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEM 205

Query: 59  VSGK 62
           ++GK
Sbjct: 206 LTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 8/60 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG--YMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG++R       E    + +G     +MA E     V++  SDV+S+GVLL EIVS
Sbjct: 152 KIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 4   KISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI+DFGM+R ++ G+       R V    +MA E  + G F+  SDV++FGV L
Sbjct: 178 KIADFGMSRNLYAGDYYRIQ-GRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 38/141 (26%)

Query: 4   KISDFGMAR-IFGGN----QNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           K++DFG+AR I+        N       V    +MA E      F+ KSDV+SFGVLL E
Sbjct: 138 KVADFGLARDIYDKEYYSVHNHTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWE 194

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWK-------LWCEGEALELMDPVLKQSCVGAELLKYI 110
           +++  R +  Y   D   +  Y  +        +C     E+M                 
Sbjct: 195 LMT--RGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVM----------------- 235

Query: 111 HIGLLCVQEDPARRPSMSSVV 131
              L C    P  RP+ S +V
Sbjct: 236 ---LSCWHPKPEMRPTFSELV 253

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE----YAMEGVFSIKSDVFSFGV-LL 56
           N K+ DFG   I G   +     R  G   YMAPE     A +G + ++SDV+S G+ L 
Sbjct: 146 NIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPERIDPSARDG-YDVRSDVWSLGITLY 201

Query: 57  EIVSGK 62
           E+ +GK
Sbjct: 202 EVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 25  RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           ++VGT  YMAPE  +    S  +D+++ GV+L
Sbjct: 190 KIVGTPDYMAPERLLGVPASESTDIYALGVIL 221

Length = 932

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE 36
           KI+DFG+AR+F   +    +++ V T  Y APE
Sbjct: 139 KIADFGLARLFSEEEPRLYSHQ-VATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++    G   ++  N  VGT  YM+PE      +S++SD++S G+ L+E+  G+
Sbjct: 144 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 24/132 (18%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVG-----TYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KISDFGM+R     + E       G        + APE    G +S +SDV+SFG+LL  
Sbjct: 134 KISDFGMSR-----EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW- 187

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
                   F L    ++ L+         + + L  P L    V   + +       C +
Sbjct: 188 ------EAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMER-------CWE 234

Query: 119 EDPARRPSMSSV 130
            DP +RPS S+V
Sbjct: 235 YDPGQRPSFSTV 246

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK 62
           K++DFG        Q++ +T  +VGT  +MAPE      +  K D++S G++ +E+V G+
Sbjct: 155 KLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 9/64 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFG++R    ++  ++    VG+     +  PE  +   FS KSDV++FGVL+ E+ 
Sbjct: 140 KVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195

Query: 60  S-GK 62
           S GK
Sbjct: 196 SLGK 199

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 4   KISDFGMARIFGGN-QNEANTNRVVGTYGYMAPE 36
           KI D G+AR+F    +  A+ + VV T  Y APE
Sbjct: 152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPE 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 21/53 (39%), Positives = 28/53 (52%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI+DFGM+R            R V    +MA E  + G F+  SDV++FGV L
Sbjct: 169 KIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL 221

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFG-VLLEIVS 60
           KISDFG ++   G      T    GT  YMAPE   +G   +   +D++S G  ++E+ +
Sbjct: 149 KISDFGTSKRLAGINPCTET--FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT 206

Query: 61  GK 62
           GK
Sbjct: 207 GK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVS 60
           N +ISD G+A      Q++  T    GT G+MAPE      +    D F+ GV L E+++
Sbjct: 135 NVRISDLGLAVELKDGQSK--TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA 192

Query: 61  GK 62
            +
Sbjct: 193 AR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 36.6 bits (85), Expect = 0.004
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)

Query: 4   KISDFGMARIFGGNQNEAN---TNRVVGTYGYMAPE 36
           K++DFG+AR F  ++N      TNRVV T  Y  PE
Sbjct: 159 KLADFGLARAFSLSKNSKPNRYTNRVV-TLWYRPPE 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.85
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.84
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.84
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.83
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.83
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.81
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.8
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.8
KOG0578	550	consensus p21-activated serine/threonine protein k	99.8
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.76
KOG0198	313	consensus MEKK and related serine/threonine protei	99.76
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.75
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.75
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.75
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.74
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.72
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.71
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.71
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.71
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.71
PHA02988	283	hypothetical protein; Provisional	99.71
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.7
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.69
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.69
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.68
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.68
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.67
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.67
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.66
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.66
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.66
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.66
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.66
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.65
PTZ00283	496	serine/threonine protein kinase; Provisional	99.65
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.65
PTZ00284	467	protein kinase; Provisional	99.65
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.65
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.65
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.65
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.65
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.65
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.64
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.64
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.64
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.64
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.63
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.63
PTZ00036	440	glycogen synthase kinase; Provisional	99.63
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.63
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.63
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.63
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.63
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.63
KOG0589	426	consensus Serine/threonine protein kinase [General	99.63
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.62
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.62
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.62
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.62
PTZ00267	478	NIMA-related protein kinase; Provisional	99.62
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.61
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.61
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.61
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.61
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.61
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.61
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.61
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.61
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.61
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.61
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.61
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.6
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.6
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.6
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.6
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.6
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.6
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.6
PHA03207	392	serine/threonine kinase US3; Provisional	99.6
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.6
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.6
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.6
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.59
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.59
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.59
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.59
PHA03212	391	serine/threonine kinase US3; Provisional	99.59
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.59
PHA03211	461	serine/threonine kinase US3; Provisional	99.59
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.59
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.59
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.58
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.58
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.58
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.58
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.58
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.58
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.58
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.58
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.58
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.58
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.58
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.58
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.57
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.57
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.57
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.57
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.57
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.57
PHA02882	294	putative serine/threonine kinase; Provisional	99.57
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.57
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.57
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.57
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.57
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.57
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.57
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.57
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.56
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.56
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.56
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.56
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.56
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.56
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.56
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.56
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.56
PHA03209	357	serine/threonine kinase US3; Provisional	99.56
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.56
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.56
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.56
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.56
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.56
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.56
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.56
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.56
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.56
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.56
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.55
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.55
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.55
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.55
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.55
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.55
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.55
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.55
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.55
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.55
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.55
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.55
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.55
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.55
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.54
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.54
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.54
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.54
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.54
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.54
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.54
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.54
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.54
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.54
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.54
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.54
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.54
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.54
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.54
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.53
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.53
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.53
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.53
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.53
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.53
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.52
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.52
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.52
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.52
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.52
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.52
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.52
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.52
KOG0584	632	consensus Serine/threonine protein kinase [General	99.52
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.52
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.52
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.52
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.52
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.52
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.52
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.51
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.51
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.51
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.51
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.51
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.51
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.51
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.51
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.51
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.51
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.51
PHA03210	501	serine/threonine kinase US3; Provisional	99.51
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.51
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.51
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.51
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.51
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.51
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.5
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.5
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.5
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.5
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.5
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.5
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.5
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.5
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.5
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.5
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.5
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.5
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.5
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.5
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.49
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.49
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.49
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.49
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.49
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.49
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.49
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.49
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.49
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.49
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.49
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.49
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.49
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.49
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.48
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.48
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.48
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.48
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.48
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.48
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.48
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.48
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.48
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.48
KOG0605	550	consensus NDR and related serine/threonine kinases	99.48
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.48
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.48
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.48
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.47
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.47
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.47
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.47
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.47
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.47
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.47
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.47
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.47
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.46
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.46
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.46
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.46
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.46
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.46
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.46
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.46
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.46
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.46
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.46
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.46
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.45
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.45
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.45
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.45
PLN00181	793	protein SPA1-RELATED; Provisional	99.45
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.45
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.45
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.45
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.45
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.45
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.45
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.45
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.45
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.45
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.44
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.44
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.44
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.44
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.44
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.44
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.44
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.44
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.44
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.44
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.44
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.43
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.43
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.43
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.43
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.43
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.42
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.42
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.42
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.42
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.42
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.42
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.42
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.42
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.42
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.42
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.42
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.42
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.41
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.41
KOG3653	534	consensus Transforming growth factor beta/activin	99.41
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.41
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.41
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.41
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.41
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.41
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.41
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.41
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.41
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.41
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.41
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.4
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.4
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.4
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.4
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.4
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.39
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.39
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.39
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.39
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.39
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.39
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.39
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.38
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.37
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.37
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.37
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.37
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.37
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.37
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.37
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.37
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.36
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.36
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.36
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.36
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.36
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.36
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.36
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.36
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.36
PLN00009	294	cyclin-dependent kinase A; Provisional	99.36
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.35
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.35
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.35
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.35
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.35
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.35
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.35
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.35
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.35
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.34
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.34
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.34
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.34
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.34
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.33
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.33
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.32
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.32
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.32
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.31
KOG0610	459	consensus Putative serine/threonine protein kinase	99.31
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.31
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.31
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.29
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.29
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.29
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.29
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.29
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.25
KOG0586	596	consensus Serine/threonine protein kinase [General	99.24
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.23
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.22
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.22
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.16
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.14
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.12
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.12
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.11
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.11
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.07
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.04
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.03
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.02
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.96
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.88
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.87
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.87
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.86
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.81
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.66
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.58
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.55
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.51
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.38
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.33
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.18
KOG1152	772	consensus Signal transduction serine/threonine kin	98.11
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.05
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.91
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.61
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.56
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.31
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.25
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.07
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	95.48
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	95.44
KOG1266	458	consensus Protein kinase [Signal transduction mech	94.98
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	93.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	93.36
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	92.14
KOG2137	700	consensus Protein kinase [Signal transduction mech	91.11
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	89.84
PRK09188	365	serine/threonine protein kinase; Provisional	89.05
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	87.19

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.85  E-value=1.5e-21  Score=144.77  Aligned_cols=122  Identities=25%  Similarity=0.344  Sum_probs=89.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||||||.++.+.+.    ...++.||..||+||.+.+..|+.++||||||+. +|+..|+-|+... ...........
T Consensus       217 eVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~-~~~~~~~~~Ll  291 (364)
T KOG0581|consen  217 EVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP-NPPYLDIFELL  291 (364)
T ss_pred             CEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc-CCCCCCHHHHH
Confidence            6899999999876432    4467899999999999999999999999999975 9999999887543 11122232222


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       +.++.+....++     ..   .+..++.+|+..||++||.+||++.|++.|-.-.
T Consensus       292 -~~Iv~~ppP~lP-----~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  292 -CAIVDEPPPRLP-----EG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             -HHHhcCCCCCCC-----cc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence             222322222222     11   3556899999999999999999999999996543

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.5e-20  Score=144.11  Aligned_cols=137  Identities=37%  Similarity=0.630  Sum_probs=109.5

Q ss_pred             CCceeeceecceeecCCCCccccccc-ccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRV-VGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~-~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      |++||+|||+++.....  ....... .|+..|++||+......+.++||||||++ +|+++|+.+...........+..
T Consensus       214 ~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~  291 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVE  291 (361)
T ss_pred             CCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHH
Confidence            68999999999754321  1111122 78999999999988889999999999987 89999998876544444555788


Q ss_pred             HHHHHHhcCCcccccCcccc-cCCcH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLK-QSCVG-AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      |.........+.+++|+.+. ..+.. .+...+..++.+|++.+++.||+|.||++.|+.+..
T Consensus       292 w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  292 WAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            88888877788899999987 55554 577789999999999999999999999999966543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.84  E-value=3.9e-21  Score=146.85  Aligned_cols=123  Identities=28%  Similarity=0.398  Sum_probs=87.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc--cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM--EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~--~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++......  .......||..|||||++.  ...|+.++||||||++ ||+++|+.||.....      ..
T Consensus       182 ~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~  253 (362)
T KOG0192|consen  182 TLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQ  253 (362)
T ss_pred             EEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HH
Confidence            78999999998754321  2223368999999999999  5689999999999987 999999999743211      11


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      .........     ..+    ..+..+...+..++.+||+.||..||++.+++..|+.+....
T Consensus       254 ~~~~v~~~~-----~Rp----~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  254 VASAVVVGG-----LRP----PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             HHHHHHhcC-----CCC----CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence            111111111     112    222224456888999999999999999999999998665543

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.83  E-value=1.3e-21  Score=152.51  Aligned_cols=121  Identities=23%  Similarity=0.296  Sum_probs=91.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||-++.....   ....+++||..|||||+++..+.+.++|||||||+ |||++|..|+....   ...     
T Consensus       250 ~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd---ssA-----  318 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD---SSA-----  318 (904)
T ss_pred             eEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc---hhe-----
Confidence            4799999999865432   33456899999999999999999999999999987 99999999863211   110     


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                             .+...-...+....+..+...|.-|++.||+.+|..||++++++.||+-...+
T Consensus       319 -------IIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe  371 (904)
T KOG4721|consen  319 -------IIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE  371 (904)
T ss_pred             -------eEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence                   01111233444455566667888899999999999999999999999865443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=1.6e-21  Score=150.19  Aligned_cols=121  Identities=31%  Similarity=0.382  Sum_probs=90.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+||||++.... ..+.......-+..|.|||.+....|+.++|||||||+ ||+.+ |+.|++.   +...     
T Consensus       341 ~vKIsDFGLAr~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~---msn~-----  411 (468)
T KOG0197|consen  341 VVKISDFGLARLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG---MSNE-----  411 (468)
T ss_pred             eEEEcccccccccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC---CCHH-----
Confidence            589999999995432 22222223344678999999999999999999999997 88876 5555422   1111     


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                              +..+.++.+.+..+|..+..++.+||..||+.+|++|||+..+...|+.+..
T Consensus       412 --------ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  412 --------EVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             --------HHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence                    2234455666666777788899999999999999999999999999887654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=3.6e-21  Score=155.21  Aligned_cols=123  Identities=28%  Similarity=0.386  Sum_probs=89.5

Q ss_pred             CCceeeceecceeecCCCCccccc-ccccCCCccCccccccCccCcccceeehhHH-HHHH-hcCCCCCCCcCCCCcchH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTN-RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV-SGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~-~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~-~g~~~~~~~~~~~~~~~~   77 (181)
                      +.|||+|||+++-... .++.+.. .-.-+.+||+||.+...+|+.++||||+||+ ||+. .|+.|+...   .+..+ 
T Consensus       640 l~VKIsDfGLsRdiYs-sDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl---Sn~EV-  714 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYS-SDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL---SNQEV-  714 (774)
T ss_pred             eEEEecccccchhhhh-hhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc---chHHH-
Confidence            5799999999986533 2333221 2234679999999999999999999999987 8886 477775332   11111 


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                                  .+.++..--..++.++..++.+||..||+.+|++||+++||-..|+.....
T Consensus       715 ------------Ie~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  715 ------------IECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             ------------HHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence                        222222222355666777899999999999999999999999999987654

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=2.2e-20  Score=141.21  Aligned_cols=115  Identities=23%  Similarity=0.344  Sum_probs=84.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+|++|||++-.+..  +.....++.||+.|||||++.+..|+.++||||+|+. +++.+|..|+.-..++.        
T Consensus       149 ~vkl~DfgVa~ql~~--~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr--------  218 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTN--TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR--------  218 (467)
T ss_pred             cEEEEecceeeeeec--hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce--------
Confidence            689999999876543  3333467899999999999998899999999999987 99999998864322211        


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                              ..-++....+......+...+.+|+..||.++|+.||+|.++++|=
T Consensus       219 --------vlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~  264 (467)
T KOG0201|consen  219 --------VLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHK  264 (467)
T ss_pred             --------EEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence                    1111111111122224455688999999999999999999999873

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=4e-19  Score=139.03  Aligned_cols=118  Identities=22%  Similarity=0.266  Sum_probs=86.8

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++|||+|||||..+..  +.....+.|||+-|+|||++....++..+||||+||+ +.++.|+.||..   +......  
T Consensus       155 ~~VKIgDFGLAt~le~--~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet---k~vkety--  227 (592)
T KOG0575|consen  155 MNVKIGDFGLATQLEY--DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET---KTVKETY--  227 (592)
T ss_pred             CcEEecccceeeeecC--cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc---chHHHHH--
Confidence            5899999999987753  3344556899999999999998889999999999998 889999999732   1111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       .+..+..    ..-       |.....+..+|+..+|+.||.+|||+.+|+.|-...
T Consensus       228 -~~Ik~~~----Y~~-------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  228 -NKIKLNE----YSM-------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             -HHHHhcC----ccc-------ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence             1111111    111       112234678899999999999999999999997663

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.6e-19  Score=140.24  Aligned_cols=119  Identities=23%  Similarity=0.300  Sum_probs=86.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+|........  ...+..||+.|||||++....|+.++||||+|++ +||+.|..|+-+.  ..    ..+.
T Consensus       407 ~vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE--~P----lrAl  478 (550)
T KOG0578|consen  407 SVKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE--NP----LRAL  478 (550)
T ss_pred             cEEEeeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC--Ch----HHHH
Confidence            489999999987644333  4567899999999999999999999999999987 9999999887431  11    1111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      +-....+      .+.+  ..+..-+..+.+|+.+||..|+++|+++.|+|+|-.-
T Consensus       479 yLIa~ng------~P~l--k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl  526 (550)
T KOG0578|consen  479 YLIATNG------TPKL--KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFL  526 (550)
T ss_pred             HHHhhcC------CCCc--CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence            1111111      1111  1222334578899999999999999999999999554

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=2.6e-19  Score=139.00  Aligned_cols=122  Identities=27%  Similarity=0.362  Sum_probs=85.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-----------cCcccceeehhHH-HHHHhcCCCCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-----------FSIKSDVFSFGVL-LEIVSGKRNSGFYL   69 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-----------~~~~~diws~gv~-~~~~~g~~~~~~~~   69 (181)
                      .+||+|||.|..+..+.......+.+||+-||+||.+....           .+.++||||+||+ |+|+.|+.||+.. 
T Consensus       497 ~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-  575 (677)
T KOG0596|consen  497 RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-  575 (677)
T ss_pred             eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-
Confidence            47999999999877666666666789999999999875322           4588999999998 8999999997432 


Q ss_pred             CCCCcchHHHHHHHHhcCCcccccCcccccCCcH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           70 SKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVG-AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                             .....+      +..+.+|..+-+++. ....+++++|+.||++||++||++.+||+|-.-.
T Consensus       576 -------~n~~aK------l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~  631 (677)
T KOG0596|consen  576 -------INQIAK------LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQ  631 (677)
T ss_pred             -------HHHHHH------HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence                   111111      112223322111111 1112389999999999999999999999986543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.76  E-value=8.8e-19  Score=130.79  Aligned_cols=125  Identities=22%  Similarity=0.282  Sum_probs=84.3

Q ss_pred             CceeeceecceeecCCC-CcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQ-NEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++...... .......+.||+.|||||++.... ....+||||+||+ +||++|+.|+...     .....
T Consensus       156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~  230 (313)
T KOG0198|consen  156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAE  230 (313)
T ss_pred             eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHH
Confidence            58999999998654311 112233578999999999998633 3348999999997 9999998887432     11112


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      +...........         .++.....+..+|+.+|++.||+.||||.+++.|..-....
T Consensus       231 ~~~~ig~~~~~P---------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  231 ALLLIGREDSLP---------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHHHHhccCCCC---------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            222222222111         12222334678899999999999999999999998765443

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.75  E-value=2.4e-19  Score=143.84  Aligned_cols=123  Identities=23%  Similarity=0.347  Sum_probs=90.2

Q ss_pred             CCceeeceecceeecCCCCccccccccc--CCCccCccccccCccCcccceeehhHH-HHHH-hcCCCCCCCcCCCCcch
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVG--TYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV-SGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g--~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~-~g~~~~~~~~~~~~~~~   76 (181)
                      +.+||+|||+++.+..+... ...+..|  +..|.|||.+...+++.++||||+|++ ||++ .|..|+..   +.+.++
T Consensus       768 LvCKVsDFGLSRvledd~~~-~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd---mSNQdV  843 (996)
T KOG0196|consen  768 LVCKVSDFGLSRVLEDDPEA-AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD---MSNQDV  843 (996)
T ss_pred             eEEEeccccceeecccCCCc-cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc---cchHHH
Confidence            35799999999987544421 1222233  578999999999999999999999987 8876 47777632   222222


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      .             ..++...+..-+.++...+..||+.||++|...||++.||+.+|++....
T Consensus       844 I-------------kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  844 I-------------KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             H-------------HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            2             23334444445566677899999999999999999999999999876543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=7e-19  Score=139.06  Aligned_cols=117  Identities=22%  Similarity=0.261  Sum_probs=85.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+|.+......   ..+.||+++|.+||++.+..|. .++||||+||+ +.+++|+.||.      ..++...
T Consensus       150 nIKIADFGMAsLe~~gkl---LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd------DdNir~L  220 (786)
T KOG0588|consen  150 NIKIADFGMASLEVPGKL---LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD------DDNIRVL  220 (786)
T ss_pred             CEeeeccceeecccCCcc---ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC------CccHHHH
Confidence            479999999987543333   3446999999999999999987 66999999987 89999999984      2222222


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ..+.. . ..++++.         ....++.+|+.+|+..||+.|.|+.||++|..-..
T Consensus       221 LlKV~-~-G~f~MPs---------~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g  268 (786)
T KOG0588|consen  221 LLKVQ-R-GVFEMPS---------NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG  268 (786)
T ss_pred             HHHHH-c-CcccCCC---------cCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence            22221 1 1223332         22336889999999999999999999999976543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=6.6e-19  Score=127.06  Aligned_cols=118  Identities=28%  Similarity=0.393  Sum_probs=86.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .|||+|||+++.+..  .....++.+||+.||.||.+....|+.++||||+||+ +||+.-..||..      ..+...-
T Consensus       166 vvKLGDfGL~r~l~s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g------~n~~~L~  237 (375)
T KOG0591|consen  166 VVKLGDFGLGRFLSS--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG------DNLLSLC  237 (375)
T ss_pred             ceeeccchhHhHhcc--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc------ccHHHHH
Confidence            589999999998743  3344567899999999999999999999999999997 899998888742      2333322


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ..+..++...+++        .-.+.++..|+..|+..|++.||+.-.++..++.
T Consensus       238 -~KI~qgd~~~~p~--------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  238 -KKIEQGDYPPLPD--------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             -HHHHcCCCCCCcH--------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence             2233332222221        2334568889999999999999996666665554

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.74  E-value=4.7e-19  Score=147.47  Aligned_cols=125  Identities=29%  Similarity=0.376  Sum_probs=84.7

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      +.|||+|||+|+-......+.......-+..|||||.+....|+.++|||||||+ ||+++ |..|++.   ..+..+..
T Consensus       839 r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~---~~n~~v~~  915 (1025)
T KOG1095|consen  839 RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS---RSNFEVLL  915 (1025)
T ss_pred             CcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC---cchHHHHH
Confidence            4689999999994332222221112234578999999999999999999999997 99987 4555532   12222211


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                         ....++          +.+.+..+...+.++|..||+.+|++||++..|++.+.++....
T Consensus       916 ---~~~~gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  916 ---DVLEGG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             ---HHHhCC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence               111111          11223334446889999999999999999999999988776653

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=1.2e-18  Score=131.02  Aligned_cols=124  Identities=23%  Similarity=0.245  Sum_probs=83.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc---CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF---SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~---~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+|+...   ......++|||+.|.|||++....+   ..++|+||+||+ +-+++|..||.......  .+.
T Consensus       317 llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~  391 (475)
T KOG0615|consen  317 LLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLK  391 (475)
T ss_pred             EEEecccchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHH
Confidence            58999999999753   2333456899999999999986553   347899999998 67789988874322111  111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      +    ....+...  +.+    .....-..+..+++..+|..||+.|||+.|++.|.+.....
T Consensus       392 e----QI~~G~y~--f~p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  392 E----QILKGRYA--FGP----LQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             H----HHhcCccc--ccC----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            1    11111110  011    11123345788999999999999999999999998765443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2e-18  Score=131.96  Aligned_cols=128  Identities=20%  Similarity=0.171  Sum_probs=83.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+|+.......   .+..+.|.+|+|||++.. ..|+.++|+|++||+ .|+.+-+..|++..+   .+....
T Consensus       148 ~iKiaDFGLARev~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE---~Dqi~K  221 (538)
T KOG0661|consen  148 VIKIADFGLAREVRSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE---IDQIYK  221 (538)
T ss_pred             eeEecccccccccccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH---HHHHHH
Confidence            589999999997654333   345688999999999865 558899999999998 677776666643221   111111


Q ss_pred             HHHHHhcCCcccccC----------------cccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMD----------------PVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      +....+......+..                +.--...-.....++++++.+|++|||.+||||.|.++|..
T Consensus       222 Ic~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf  293 (538)
T KOG0661|consen  222 ICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF  293 (538)
T ss_pred             HHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence            112222111111111                00001111235668899999999999999999999999853

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.71  E-value=1.6e-18  Score=136.80  Aligned_cols=120  Identities=27%  Similarity=0.360  Sum_probs=89.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      -|||+||||++++..+....+ ....-++.|.|||.+..+.|+.++|||+|||+ |++.+ |..|++..      ++   
T Consensus       403 iVKvADFGLsRlMtgDTYTAH-AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi------dl---  472 (1157)
T KOG4278|consen  403 IVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI------DL---  472 (1157)
T ss_pred             eEEeeccchhhhhcCCceecc-cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc------cH---
Confidence            379999999998865443322 22334678999999999999999999999997 88865 44554321      11   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                             ..+..+++...+.+.+..|...+.+||+.||+|.|.+||+++|+-+.++..-
T Consensus       473 -------SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  473 -------SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             -------HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence                   1123455666666666777788999999999999999999999998887543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.71  E-value=2.8e-18  Score=124.93  Aligned_cols=127  Identities=21%  Similarity=0.253  Sum_probs=84.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||||||+|+.+..  .....+....|.+|.|||.+.+ ..|+..+|||++||+ .|+++|...++...+-   +....
T Consensus       139 vvKLCDFGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi---DQLy~  213 (396)
T KOG0593|consen  139 VVKLCDFGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI---DQLYL  213 (396)
T ss_pred             cEEeccchhhHhhcC--CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH---HHHHH
Confidence            579999999997653  3333456788999999999987 779999999999998 7999998776543322   22222


Q ss_pred             HHHHHhc-----------CCcc---cccCc----ccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCE-----------GEAL---ELMDP----VLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~-----------~~~~---~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      +....+.           ...+   .++++    .++..++ ....-+++|+..|++.||.+|++.+|++.|-
T Consensus       214 I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~  285 (396)
T KOG0593|consen  214 IRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHHP  285 (396)
T ss_pred             HHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence            2222111           1100   01111    0111111 2233578999999999999999999999763

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.71  E-value=6.3e-18  Score=125.83  Aligned_cols=120  Identities=28%  Similarity=0.384  Sum_probs=80.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++|+||+|++ +++++ |..|+....   ...+   
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~---~~~~---  235 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS---NQEV---  235 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC---HHHH---
Confidence            579999999875432222122223356778999999988888999999999987 88887 877763221   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ..........         ..+.....++.+|+.+||+.||.+||++.+|+++|+++
T Consensus       236 -~~~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         236 -IEMIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             -HHHHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence             1111111111         11222335688999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PHA02988 hypothetical protein; Provisional

Probab=99.71  E-value=6.9e-18  Score=126.05  Aligned_cols=117  Identities=21%  Similarity=0.249  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......     ....|+..|+|||.+.+  ..++.++||||+||+ |++++|..||....   ...+. 
T Consensus       161 ~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~---~~~~~-  231 (283)
T PHA02988        161 KLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT---TKEIY-  231 (283)
T ss_pred             cEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC---HHHHH-
Confidence            57999999987542211     12357888999999875  578899999999987 99999999974321   11111 


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                        ....... ..    ...    +......+.+++.+||+.||++|||+.+|++.|++..
T Consensus       232 --~~i~~~~-~~----~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        232 --DLIINKN-NS----LKL----PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             --HHHHhcC-CC----CCC----CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence              1111111 10    111    1122346889999999999999999999999998764

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.70  E-value=4.8e-18  Score=129.73  Aligned_cols=122  Identities=30%  Similarity=0.405  Sum_probs=81.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+.....  ...   .
T Consensus       212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~--~~~---~  286 (338)
T cd05102         212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI--NEE---F  286 (338)
T ss_pred             cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc--cHH---H
Confidence            579999999976432222222223345678999999988889999999999987 88886 8777643211  000   1


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                       ...........         .+......+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       287 -~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         287 -CQRLKDGTRMR---------APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             -HHHHhcCCCCC---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             11111111111         01122346889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1.2e-17  Score=133.21  Aligned_cols=117  Identities=26%  Similarity=0.327  Sum_probs=83.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC--ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG--VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~--~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||-++.+.+-..  +..++.||..|||||++-++  .|+..+|||||||. .||.+|+.||.-..... ..   
T Consensus       714 vlKISDFGTsKRLAginP--~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AA---  787 (1226)
T KOG4279|consen  714 VLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AA---  787 (1226)
T ss_pred             eEEecccccchhhccCCc--cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-Hh---
Confidence            479999999987643222  33467899999999999754  48899999999996 89999999973211110 00   


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                        ....   ..   .  .....++.....+...++.+|+..||.+||++.++++..
T Consensus       788 --MFkV---Gm---y--KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp  833 (1226)
T KOG4279|consen  788 --MFKV---GM---Y--KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP  833 (1226)
T ss_pred             --hhhh---cc---e--ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence              0000   00   0  112344556677889999999999999999999999763

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.69  E-value=2.2e-17  Score=129.42  Aligned_cols=128  Identities=22%  Similarity=0.318  Sum_probs=84.8

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ..|||+|||++.....-..........|...|||||+++   ..+|+..+|||+||++ ||+++|.-|+. .   ...+.
T Consensus       525 ~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i---~~~dq  600 (678)
T KOG0193|consen  525 LKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-I---QNRDQ  600 (678)
T ss_pred             CcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-C---CChhh
Confidence            368999999986432221222223457888999999997   3568999999999988 89999998864 1   11100


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ..  +.. ..+.  -.++..   .....+..++.+|+..||..++++||.+.+|+..|..+...
T Consensus       601 Ii--fmV-GrG~--l~pd~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  601 II--FMV-GRGY--LMPDLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             eE--EEe-cccc--cCccch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            00  000 0010  011111   11234556789999999999999999999999988877553

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=6.6e-17  Score=122.93  Aligned_cols=127  Identities=24%  Similarity=0.356  Sum_probs=83.5

Q ss_pred             CceeeceecceeecCCCCcc-cc-cccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEA-NT-NRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~-~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      .|||+|||.+..+....... .. ..+.|+++|||||++.+  ..|+.|+||||||+. +|+..|..||....++     
T Consensus       164 ~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-----  238 (516)
T KOG0582|consen  164 TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-----  238 (516)
T ss_pred             cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-----
Confidence            58999999876553322211 12 56789999999999543  559999999999997 9999999997432211     


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ........+. ........+..+........|..++..||.+||++|||++++++|-.
T Consensus       239 -kvLl~tLqn~-pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F  295 (516)
T KOG0582|consen  239 -KVLLLTLQND-PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF  295 (516)
T ss_pred             -HHHHHHhcCC-CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence             1111111111 11111112222222333446888999999999999999999998853

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.68  E-value=9.2e-17  Score=111.72  Aligned_cols=117  Identities=16%  Similarity=0.156  Sum_probs=76.3

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTW   81 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~   81 (181)
                      +|+  ||+++.....       ...|+..|+|||++.+..++.++||||+||+ +++++|..|+....  ..........
T Consensus        50 ~~~--fG~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~--~~~~~~~~~~  118 (176)
T smart00750       50 LKL--DGSVAFKTPE-------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEER--ELSAILEILL  118 (176)
T ss_pred             eee--ccceEeeccc-------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccc--hhcHHHHHHH
Confidence            556  8888764321       1257889999999999889999999999987 89999998863211  1111111111


Q ss_pred             HHHhcCCcccccCcccccCCcHHHH--HHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           82 KLWCEGEALELMDPVLKQSCVGAEL--LKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......      .+. .........  ..+.+++.+||..+|++||++.||+.|+...
T Consensus       119 ~~~~~~------~~~-~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      119 NGMPAD------DPR-DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHhccC------Ccc-ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            111100      000 000111112  2588999999999999999999999998764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.67  E-value=2.3e-17  Score=127.78  Aligned_cols=121  Identities=28%  Similarity=0.438  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||++....++.++||||+|++ +++++ |..|+.....  .....  
T Consensus       250 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~--~~~~~--  325 (374)
T cd05106         250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV--NSKFY--  325 (374)
T ss_pred             eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc--cHHHH--
Confidence            479999999876433222111122234567999999988889999999999987 88887 8888643211  01111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        ...... . ....+       .....++.+++.+||+.||++||++.+|++.|+++
T Consensus       326 --~~~~~~-~-~~~~~-------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         326 --KMVKRG-Y-QMSRP-------DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             --HHHHcc-c-CccCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              111111 0 00001       11124688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=3e-17  Score=130.83  Aligned_cols=116  Identities=25%  Similarity=0.285  Sum_probs=84.3

Q ss_pred             CceeeceecceeecCCCCcccc-cccccCCCccCccccccCccCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANT-NRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~-~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+||||.+-+....+.+.. ....-.+.|.|||.++...|+.++|+|.+||. |||.++ .+|+...   .+.    
T Consensus       250 tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~---~g~----  322 (1039)
T KOG0199|consen  250 TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC---RGI----  322 (1039)
T ss_pred             eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC---CHH----
Confidence            5899999999987655544322 22234568999999999999999999999985 999865 4554221   111    


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                               .+...+|..-+...+..+...+.++|+.||..+|++||||..|.+.
T Consensus       323 ---------qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  323 ---------QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             ---------HHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence                     1223344444445566677889999999999999999999999743

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.66  E-value=2.1e-17  Score=126.36  Aligned_cols=122  Identities=29%  Similarity=0.351  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+||+ +++++ |..|+.....   ..   .
T Consensus       211 ~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~---~~---~  284 (337)
T cd05054         211 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI---DE---E  284 (337)
T ss_pred             cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc---cH---H
Confidence            579999999986532222222223345678999999988889999999999987 88887 7777642111   00   0


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ........... .        .+.....++.+++.+||+.+|++||++.||+++|+...
T Consensus       285 ~~~~~~~~~~~-~--------~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         285 FCRRLKEGTRM-R--------APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHhccCCC-C--------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            11111111110 0        11122346889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.3e-17  Score=123.55  Aligned_cols=140  Identities=21%  Similarity=0.196  Sum_probs=86.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+|+...........++..-|.+|.|||++.. ..|+...||||.||+ .|+++|+..|++....+   ....
T Consensus       163 ~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~---Ql~l  239 (359)
T KOG0660|consen  163 DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH---QLQL  239 (359)
T ss_pred             CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH---HHHH
Confidence            369999999997643322223356678999999998764 569999999999998 79999998775422111   1111


Q ss_pred             HHHHHhc-----------CCcccccCcc---cccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh--hcCCCC
Q 041917           80 TWKLWCE-----------GEALELMDPV---LKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML--ASDTIT  140 (181)
Q Consensus        80 ~~~~~~~-----------~~~~~~~~~~---~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L--~~~~~~  140 (181)
                      .....+.           ......+...   .+..   .-.......++|+.+||..||.+|+|++|.+.|.  ......
T Consensus       240 I~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  240 ILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP  319 (359)
T ss_pred             HHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence            1111100           0011111100   0000   0112234689999999999999999999999984  444333


Q ss_pred             CCCC
Q 041917          141 LPPP  144 (181)
Q Consensus       141 ~~~~  144 (181)
                      ..+|
T Consensus       320 ~dEP  323 (359)
T KOG0660|consen  320 EDEP  323 (359)
T ss_pred             ccCC
Confidence            3444

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.66  E-value=2.1e-16  Score=119.01  Aligned_cols=126  Identities=25%  Similarity=0.265  Sum_probs=77.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcC--CCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK--RNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~--~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++...............++..|+|||++....++.++||||+|++ ++++++.  .|+...   .......
T Consensus       176 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~---~~~~~~~  252 (304)
T cd05096         176 TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL---TDEQVIE  252 (304)
T ss_pred             cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC---CHHHHHH
Confidence            589999999976432221111222345778999999988889999999999987 8887654  343211   1111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .............  ..    ..+......+.+|+.+||+.||++|||+.+|.+.|++
T Consensus       253 ~~~~~~~~~~~~~--~~----~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         253 NAGEFFRDQGRQV--YL----FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             HHHHHhhhccccc--cc----cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            1111111110000  00    0111223468899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.66  E-value=5.2e-17  Score=128.20  Aligned_cols=120  Identities=22%  Similarity=0.318  Sum_probs=92.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhH-HHHHH-hcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV-SGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv-~~~~~-~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .|||+|||+++.+... .........-+..||+||.+.-..|+.++|||-||| +||++ .|.+||....          
T Consensus       529 CVKLaDFGLSR~~ed~-~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk----------  597 (974)
T KOG4257|consen  529 CVKLADFGLSRYLEDD-AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK----------  597 (974)
T ss_pred             eeeecccchhhhcccc-chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc----------
Confidence            4799999999977543 333333344578899999999999999999999995 59875 5888874321          


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                            ..++...++.+-+...+..+...+..||.+||.+||.+||.+.++...|..+.
T Consensus       598 ------NsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  598 ------NSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             ------ccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence                  23334455666666777788888999999999999999999999988876443

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.66  E-value=2.7e-17  Score=134.20  Aligned_cols=121  Identities=26%  Similarity=0.320  Sum_probs=83.0

Q ss_pred             CceeeceecceeecCCCCccccccc-ccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRV-VGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~-~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++............+. .-+..|||||.+....|+.++||||+|++ ||+.+ |..|++..     .....
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~-----~~~~~  530 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI-----PPTEE  530 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC-----CcHHH
Confidence            4799999999865433333211111 13557999999999999999999999986 88876 44554320     00111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      . .         +.+..+.+...|..+..++..||+.||+.+|++||++.++++.+...
T Consensus       531 l-~---------~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  531 L-L---------EFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             H-H---------HHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            1 1         12333333344445566899999999999999999999999999884

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.65  E-value=4.2e-17  Score=126.41  Aligned_cols=120  Identities=28%  Similarity=0.454  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+.....  ....   
T Consensus       252 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~--~~~~---  326 (375)
T cd05104         252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV--DSKF---  326 (375)
T ss_pred             cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc--hHHH---
Confidence            479999999986533222111122334567999999988889999999999987 89887 6666532110  0111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       .........  ...+       .....++.+|+..||+.||++||++.+|++.|++
T Consensus       327 -~~~~~~~~~--~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         327 -YKMIKEGYR--MLSP-------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             -HHHHHhCcc--CCCC-------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence             111111110  0001       1112368899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.65  E-value=4.9e-17  Score=130.12  Aligned_cols=116  Identities=28%  Similarity=0.340  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++..............+|+..|+|||.+.+..++.++||||+|++ +++++|..||...      ......
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~------~~~~~~  254 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE------NMEEVM  254 (496)
T ss_pred             CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHH
Confidence            589999999986543222222334678999999999998889999999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ..... .....         .+.....++.+++.+||+.||.+||++.+|+.|
T Consensus       255 ~~~~~-~~~~~---------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        255 HKTLA-GRYDP---------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHhc-CCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            11111 11111         111223468899999999999999999999876

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.65  E-value=6.9e-17  Score=120.30  Aligned_cols=119  Identities=29%  Similarity=0.347  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+....++.++||||+|++ +++++ |..|+...      .....
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~  235 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY------SNQDV  235 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC------CHHHH
Confidence            579999999875432222111222345678999999988888899999999987 89887 65554321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ... ........         .+......+.+++..||+.+|++||++.+|+..|+.
T Consensus       236 ~~~-i~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         236 IEM-IRNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHH-HHcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            111 11111111         111223457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00284 protein kinase; Provisional

Probab=99.65  E-value=1.6e-16  Score=126.37  Aligned_cols=129  Identities=16%  Similarity=0.086  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.+....     ......+|+..|+|||++.+..|+.++||||+||+ +++++|+.||.....   .......
T Consensus       286 ~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~---~~~~~~i  357 (467)
T PTZ00284        286 RVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN---LEHLHLM  357 (467)
T ss_pred             eEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHH
Confidence            48999999875321     11234578999999999999899999999999987 899999998743221   1111111


Q ss_pred             HHHHh--------------------c-CCcccccCcc-----ccc--CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WKLWC--------------------E-GEALELMDPV-----LKQ--SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~~~~--------------------~-~~~~~~~~~~-----~~~--~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      .....                    . .......++.     ...  .........+.+|+.+||++||++|||+.|+++
T Consensus       358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            00000                    0 0000000000     000  000011235779999999999999999999999


Q ss_pred             HhhcCC
Q 041917          133 MLASDT  138 (181)
Q Consensus       133 ~L~~~~  138 (181)
                      |-.-..
T Consensus       438 Hp~~~~  443 (467)
T PTZ00284        438 HPYVLK  443 (467)
T ss_pred             Cccccc
Confidence            876543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=4.9e-17  Score=129.00  Aligned_cols=112  Identities=21%  Similarity=0.271  Sum_probs=84.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....  ......++|||+-|+|||++.+..|+..+|.|+|||+ ++|+.|..||....+   ..     
T Consensus       506 h~kiADFGlcKe~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE---ee-----  575 (694)
T KOG0694|consen  506 HVKIADFGLCKEGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE---EE-----  575 (694)
T ss_pred             cEEecccccccccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH---HH-----
Confidence            689999999986432  3335667999999999999999999999999999997 899999999853211   11     


Q ss_pred             HHHHhcCCcccccCcccc--cCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLK--QSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L  134 (181)
                                 +++..+-  ..+|.....+.+.||.++|.++|++|..+     .+|..|.
T Consensus       576 -----------~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hp  625 (694)
T KOG0694|consen  576 -----------VFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHP  625 (694)
T ss_pred             -----------HHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCC
Confidence                       1111111  12345556689999999999999999976     5666664

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.65  E-value=1.8e-16  Score=112.73  Aligned_cols=119  Identities=19%  Similarity=0.228  Sum_probs=84.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      -+||+|||++..+.   +......+.|++.|++||+++..+|+..+|||+.||+ +-++.|+.||..   .....+.+  
T Consensus       151 ~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~---~~~~rlye--  222 (355)
T KOG0033|consen  151 AVKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYE--  222 (355)
T ss_pred             ceeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC---ccHHHHHH--
Confidence            37999999998764   4445567899999999999999999999999999988 667889988743   12222221  


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                        .+..+.. ++..+     .-..-.++..+++++||..||.+|.|+.|.+.|-+-
T Consensus       223 --~I~~g~y-d~~~~-----~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi  270 (355)
T KOG0033|consen  223 --QIKAGAY-DYPSP-----EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI  270 (355)
T ss_pred             --HHhcccc-CCCCc-----ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence              1111111 11111     111223467889999999999999999999988653

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.4e-16  Score=117.76  Aligned_cols=120  Identities=22%  Similarity=0.320  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+....++.++|+||+|++ +++++ |..|+...   ....... 
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~---~~~~~~~-  226 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV---ENHEIYD-  226 (273)
T ss_pred             eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC---CHHHHHH-
Confidence            579999999986543222111112234567999999888888999999999987 89888 66665321   1111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                         ..........         +......+.+++.+||+.||++||++.+|+++|+++
T Consensus       227 ---~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         227 ---YLRHGNRLKQ---------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             ---HHHcCCCCCC---------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence               1111111111         112234688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.65  E-value=1.3e-16  Score=119.39  Aligned_cols=120  Identities=30%  Similarity=0.350  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|++||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~  243 (293)
T cd05053         170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI------PVEEL  243 (293)
T ss_pred             eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC------CHHHH
Confidence            479999999986543221111112234567999999888888999999999987 88886 77665321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ..........         ..+......+.+|+.+||..+|++|||+.+|+++|+.+
T Consensus       244 -~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         244 -FKLLKEGYRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             -HHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence             1111111100         11112234688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.65  E-value=6.4e-17  Score=120.22  Aligned_cols=119  Identities=29%  Similarity=0.349  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||++.+..++.++||||+||+ +++++ |..|+....   .....  
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~---~~~~~--  231 (277)
T cd05036         157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT---NQEVM--  231 (277)
T ss_pred             ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHH--
Confidence            479999999876522111111112233457999999988889999999999987 88886 777653211   11111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ....... ...         .+......+.+++.+||+.+|++||++.+|+++|++
T Consensus       232 -~~~~~~~-~~~---------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         232 -EFVTGGG-RLD---------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             -HHHHcCC-cCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence             1111110 000         111123468889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=4.9e-16  Score=119.66  Aligned_cols=117  Identities=21%  Similarity=0.234  Sum_probs=84.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||++....  .......+.+|++.|+|||++.+.. |. .++||||+||+ +.+++|+.||..      .....
T Consensus       159 ~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d------~~~~~  230 (370)
T KOG0583|consen  159 NLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD------SNVPN  230 (370)
T ss_pred             CEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC------ccHHH
Confidence            68999999998753  2233445679999999999999877 87 66999999987 889999999843      12111


Q ss_pred             HHHHHHhcC--CcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           79 YTWKLWCEG--EALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        79 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .... ....  .+...++           ..++..++.+|+..||..|+|+.+|+.|-+...
T Consensus       231 l~~k-i~~~~~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  231 LYRK-IRKGEFKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHH-HhcCCccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            1111 1111  1111111           457889999999999999999999998866554

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.64  E-value=1.1e-16  Score=119.17  Aligned_cols=122  Identities=23%  Similarity=0.294  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||+|++ +++++ |..|+....   ....   
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~---~~~~---  220 (279)
T cd05111         147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR---PHEV---  220 (279)
T ss_pred             cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC---HHHH---
Confidence            579999999986533222222223456678999999988889999999999987 89987 777763211   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                       ...........  .+.       .....+..++.+||..||..||++.+|++.|..+..
T Consensus       221 -~~~~~~~~~~~--~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         221 -PDLLEKGERLA--QPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             -HHHHHCCCcCC--CCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence             11111111111  111       112356778899999999999999999999987654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.64  E-value=7.4e-16  Score=121.72  Aligned_cols=131  Identities=20%  Similarity=0.196  Sum_probs=84.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.++....     ...+.+.+..|.|||++.+.+|+.+.|+|||||+ .|+.+|...|+...+.+   ....+
T Consensus       329 ~vKVIDFGSSc~~~q-----~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D---Ql~~I  400 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQ-----RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD---QLARI  400 (586)
T ss_pred             ceeEEecccccccCC-----cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH---HHHHH
Confidence            589999999986422     1225678999999999999999999999999998 79999966554221111   00000


Q ss_pred             HHHH------------------hc-C---------C-----------------cccccCc----ccccCCcHHHHHHHHH
Q 041917           81 WKLW------------------CE-G---------E-----------------ALELMDP----VLKQSCVGAELLKYIH  111 (181)
Q Consensus        81 ~~~~------------------~~-~---------~-----------------~~~~~~~----~~~~~~~~~~~~~~~~  111 (181)
                      .+..                  .. .         .                 ......|    .+........-..+++
T Consensus       401 ~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d  480 (586)
T KOG0667|consen  401 IEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID  480 (586)
T ss_pred             HHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence            0000                  00 0         0                 0000000    0001111233456899


Q ss_pred             HHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917          112 IGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus       112 l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ++.+||.+||..|+|..|.++|-+-....
T Consensus       481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  481 FLKRCLEWDPAERITPAQALNHPFLTGTS  509 (586)
T ss_pred             HHHHHhccCchhcCCHHHHhcCccccccc
Confidence            99999999999999999999997755333

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.64  E-value=1e-16  Score=119.99  Aligned_cols=123  Identities=27%  Similarity=0.307  Sum_probs=82.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++................++..|++||.+.+..++.++|+||+|++ +++++ |..|+....   ....   
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---~~~~---  234 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS---NTEV---  234 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---HHHH---
Confidence            579999999875432211111222346778999999988888999999999987 89888 777753211   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                       ............         +......+.+++.+||+.+|++||++.+|++.|+++...
T Consensus       235 -~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         235 -IECITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             -HHHHhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence             111111111111         111234688999999999999999999999999988553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.63  E-value=6.4e-16  Score=117.84  Aligned_cols=129  Identities=21%  Similarity=0.268  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++......    ......|+..|+|||.+.+..++.++||||+||+ +++++|+.|+.....   ..+....
T Consensus       142 ~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~~~~  214 (331)
T cd06649         142 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA---KELEAIF  214 (331)
T ss_pred             cEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHh
Confidence            5799999998754221    1223468899999999988889999999999987 899999998743211   0010000


Q ss_pred             HHHHhc--CCcc----------------------------ccc----CcccccCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 041917           81 WKLWCE--GEAL----------------------------ELM----DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS  126 (181)
Q Consensus        81 ~~~~~~--~~~~----------------------------~~~----~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt  126 (181)
                      ......  ....                            ...    ..............++.+|+.+||++||++|||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt  294 (331)
T cd06649         215 GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERAD  294 (331)
T ss_pred             cccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCC
Confidence            000000  0000                            000    000000000112346889999999999999999


Q ss_pred             HHHHHHHhhcC
Q 041917          127 MSSVVVMLASD  137 (181)
Q Consensus       127 ~~evl~~L~~~  137 (181)
                      +.+|++|..-.
T Consensus       295 ~~ell~h~~~~  305 (331)
T cd06649         295 LKMLMNHTFIK  305 (331)
T ss_pred             HHHHhcChHHh
Confidence            99999997654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.63  E-value=1.8e-16  Score=117.78  Aligned_cols=119  Identities=27%  Similarity=0.308  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   ......  
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~---~~~~~~--  234 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL---SNEEVI--  234 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC---CHHHHH--
Confidence            579999999875432221111122345678999999988889999999999987 89998 88776321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       .. .........         +......+.+++.+||+.||++||++.||++.|++
T Consensus       235 -~~-~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         235 -EC-ITQGRLLQR---------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             -HH-HHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence             11 111111111         11122467899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.63  E-value=1.1e-16  Score=126.51  Aligned_cols=129  Identities=17%  Similarity=0.152  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......   ......|+..|+|||++.+. .++.++||||+||+ +++++|..||......  ..+...
T Consensus       209 ~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i  283 (440)
T PTZ00036        209 TLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV--DQLVRI  283 (440)
T ss_pred             ceeeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH
Confidence            48999999998653221   12234678899999998654 58899999999987 8999998887432110  011111


Q ss_pred             HHHHHhcC----------Ccc-----cccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEG----------EAL-----ELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~----------~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       .......          ...     ......+....+.....++.+|+.+||.+||.+|||+.|++.|..-
T Consensus       284 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f  354 (440)
T PTZ00036        284 -IQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF  354 (440)
T ss_pred             -HHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhH
Confidence             0000000          000     0000001111122223468899999999999999999999988653

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.63  E-value=1.8e-16  Score=114.32  Aligned_cols=120  Identities=23%  Similarity=0.275  Sum_probs=83.3

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccc------cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM------EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG   73 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~------~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~   73 (181)
                      +++||+|||+++.+.   ........|||+.|.|||.+.      ...|+..+|.|++||+ +.++.|..||.+..    
T Consensus       160 ~~i~isDFGFa~~l~---~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk----  232 (411)
T KOG0599|consen  160 MNIKISDFGFACQLE---PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK----  232 (411)
T ss_pred             cceEEeccceeeccC---CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH----
Confidence            468999999998763   344455679999999999986      2347888999999988 78899999975321    


Q ss_pred             cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           74 HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       .+  .....+.++.. ++     ..+...+...+..+++.+||+.||++|.|++|++.|-..
T Consensus       233 -Qm--lMLR~ImeGky-qF-----~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  233 -QM--LMLRMIMEGKY-QF-----RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             -HH--HHHHHHHhccc-cc-----CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence             01  11111111111 11     111122334467889999999999999999999998654

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.63  E-value=5.2e-16  Score=120.51  Aligned_cols=118  Identities=19%  Similarity=0.218  Sum_probs=84.0

Q ss_pred             CCceeeceecceeecCCCC-----------cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCC
Q 041917            1 MNPKISDFGMARIFGGNQN-----------EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFY   68 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~-----------~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~   68 (181)
                      +++||+|||-++.+.....           .....+++||..|.+||++.....+..+|+|+|||+ ++|+.|..||.. 
T Consensus       211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra-  289 (604)
T KOG0592|consen  211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA-  289 (604)
T ss_pred             CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc-
Confidence            5899999999997743211           111256899999999999999999999999999997 899999999732 


Q ss_pred             cCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           69 LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                        .+...+.+.+.  .....            ++........+|+.+.|..||.+|+|+.||.+|..
T Consensus       290 --~NeyliFqkI~--~l~y~------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  290 --ANEYLIFQKIQ--ALDYE------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             --ccHHHHHHHHH--Hhccc------------CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence              11111111111  11111            11112245788999999999999999999999964

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.63  E-value=1.4e-16  Score=120.65  Aligned_cols=123  Identities=22%  Similarity=0.355  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++||||+|++ |++++ |..|+...      .....
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~------~~~~~  220 (316)
T cd05108         147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI------PASEI  220 (316)
T ss_pred             cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------CHHHH
Confidence            579999999986543222211112234567999999988889999999999987 88887 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                       ........  ....       +..+...+..++..||..+|..||++.+|+.+|......
T Consensus       221 -~~~~~~~~--~~~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         221 -SSILEKGE--RLPQ-------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             -HHHHhCCC--CCCC-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence             11111111  0111       111223578899999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.63  E-value=4.6e-16  Score=115.72  Aligned_cols=116  Identities=22%  Similarity=0.243  Sum_probs=81.5

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .|++|+|||+++....  ......++|||+.|||||++.+..|+..+|.||+|++ ++|++|..||..      .+....
T Consensus       162 GHi~LtDFgL~k~~~~--~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~------~~~~~~  233 (357)
T KOG0598|consen  162 GHIKLTDFGLCKEDLK--DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA------EDVKKM  233 (357)
T ss_pred             CcEEEeccccchhccc--CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC------ccHHHH
Confidence            3789999999986432  2333456899999999999999999999999999987 899999999743      122221


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC----CHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP----SMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp----t~~evl~~L  134 (181)
                      ..... ..... .+        +.-...+..+++.+.+.+||++|.    .+.+|..|-
T Consensus       234 ~~~I~-~~k~~-~~--------p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hp  282 (357)
T KOG0598|consen  234 YDKIL-KGKLP-LP--------PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHP  282 (357)
T ss_pred             HHHHh-cCcCC-CC--------CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCc
Confidence            11111 11110 01        111223688899999999999996    677777664

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.63  E-value=1.2e-16  Score=119.26  Aligned_cols=130  Identities=22%  Similarity=0.228  Sum_probs=86.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.+...     .......+.|..|.|||++.+..++..+||||+||+ .|+.+|...|......+...+.+.+
T Consensus       250 ~I~vIDFGsAtf~-----~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  250 AIKVIDFGSATFD-----HEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             ceEEEecCCccee-----ccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence            5799999998753     222345688999999999999999999999999998 7999998877654422221111111


Q ss_pred             --------------HHHHhcCCcccccCcccc----------------cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 041917           81 --------------WKLWCEGEALELMDPVLK----------------QSCVGAELLKYIHIGLLCVQEDPARRPSMSSV  130 (181)
Q Consensus        81 --------------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev  130 (181)
                                    .++...+ ..++.+....                ......+..++++|+.++|..||.+|+|++|+
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA  403 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA  403 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence                          0111111 0111110000                01223455679999999999999999999999


Q ss_pred             HHHhhcC
Q 041917          131 VVMLASD  137 (181)
Q Consensus       131 l~~L~~~  137 (181)
                      +.|-...
T Consensus       404 L~HpFF~  410 (415)
T KOG0671|consen  404 LSHPFFA  410 (415)
T ss_pred             hcCHHhh
Confidence            9986543

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=1.8e-16  Score=121.87  Aligned_cols=113  Identities=24%  Similarity=0.302  Sum_probs=84.3

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTW   81 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~   81 (181)
                      +||+|||+++.+....  ....+..||+.|++||.+.+.+|+.++|||++||+ +++++-+.+|..      .+....+.
T Consensus       145 VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a------~~m~~Li~  216 (426)
T KOG0589|consen  145 VKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA------SNMSELIL  216 (426)
T ss_pred             eeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc------cchHHHHH
Confidence            6999999999875332  24456799999999999999999999999999976 899988877632      22222222


Q ss_pred             HHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           82 KLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .....          .-...+.....++..++..|++.+|..||++.+++.+
T Consensus       217 ki~~~----------~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  217 KINRG----------LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHhhc----------cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            22211          1112234455678899999999999999999999976

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.62  E-value=4.2e-16  Score=116.45  Aligned_cols=127  Identities=22%  Similarity=0.198  Sum_probs=78.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....   .......|+..|+|||.+.+..++.++||||+|++ +++++|..||.....   .......
T Consensus       148 ~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~---~~~~~~i  221 (290)
T cd07862         148 QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKI  221 (290)
T ss_pred             CEEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH---HHHHHHH
Confidence            5799999999764322   12234568899999999988888999999999987 899998887643211   1111111


Q ss_pred             HHHHhcCCcccc------cCcccc--c-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALEL------MDPVLK--Q-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~------~~~~~~--~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ...........+      ......  .     .........+.+++.+||+.||++|||+.+++.|.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp  288 (290)
T cd07862         222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  288 (290)
T ss_pred             HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence            111000000000      000000  0     00011223567899999999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.62  E-value=4.1e-17  Score=120.33  Aligned_cols=117  Identities=30%  Similarity=0.435  Sum_probs=73.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++................+...|++||.+....++.++||||||++ |++++ |..|+...      .....
T Consensus       141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------~~~~~  214 (259)
T PF07714_consen  141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------DNEEI  214 (259)
T ss_dssp             EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------CHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccc
Confidence            579999999986532222222223345678999999988889999999999987 99999 55664211      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ... .........         +......+.+++..||+.||++||++.+|++.|
T Consensus       215 ~~~-~~~~~~~~~---------~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  215 IEK-LKQGQRLPI---------PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHH-HHTTEETTS---------BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccc-cccccccee---------ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            111 122111111         111223578899999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.62  E-value=2.3e-16  Score=123.17  Aligned_cols=122  Identities=25%  Similarity=0.324  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+.....  .    ..
T Consensus       275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~--~----~~  348 (400)
T cd05105         275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV--D----ST  348 (400)
T ss_pred             EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch--h----HH
Confidence            479999999986533222222223356678999999988888999999999987 88886 7777642110  0    01


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ..........     .    ..+......+.+++.+||+.||++||++.+|.+.|+...
T Consensus       349 ~~~~~~~~~~-----~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         349 FYNKIKSGYR-----M----AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHhcCCC-----C----CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            1111111100     0    011122346889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.62  E-value=1.8e-16  Score=118.54  Aligned_cols=121  Identities=26%  Similarity=0.353  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++||||+|++ +++++ |..|+...   ....+.  
T Consensus       165 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~---~~~~~~--  239 (290)
T cd05045         165 KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI---APERLF--  239 (290)
T ss_pred             cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC---CHHHHH--
Confidence            579999999875432222211222345667999999888888899999999987 89998 77765321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                        .......         ....+......+.+++..||+.+|++||++.+|+..|+++.
T Consensus       240 --~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         240 --NLLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             --HHHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence              1111110         00111122346889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.62  E-value=1.9e-16  Score=126.35  Aligned_cols=116  Identities=21%  Similarity=0.219  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++..............+|+..|+|||++.+..++.++||||+||+ +++++|..|+...      ......
T Consensus       207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~------~~~~~~  280 (478)
T PTZ00267        207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP------SQREIM  280 (478)
T ss_pred             cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            579999999986543222222344679999999999988889999999999987 8999999887321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .... ......         .+.....++.+++.+||..||+.||++.+++.+
T Consensus       281 ~~~~-~~~~~~---------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        281 QQVL-YGKYDP---------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             HHHH-hCCCCC---------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            1111 111110         011122468899999999999999999999765

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.61  E-value=1.9e-16  Score=118.34  Aligned_cols=122  Identities=25%  Similarity=0.268  Sum_probs=80.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++|+||+|++ +++++ |..|+....      ....
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~------~~~~  231 (288)
T cd05093         158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEV  231 (288)
T ss_pred             cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHH
Confidence            478999999875432221111222345678999999988888999999999987 88888 666653211      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                       ............     ..    ....++.+|+.+||+.||.+|||+.+|+..|+++..
T Consensus       232 -~~~i~~~~~~~~-----~~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         232 -IECITQGRVLQR-----PR----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             -HHHHHcCCcCCC-----CC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence             111111111111     01    122368899999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.61  E-value=6.1e-16  Score=118.04  Aligned_cols=122  Identities=27%  Similarity=0.283  Sum_probs=79.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|++||.+.+..++.++|||++|++ +++++ |..|+..      ......
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~------~~~~~~  245 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG------IPVEEL  245 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC------CCHHHH
Confidence            579999999876532211111111233467999999988888999999999987 88887 6666532      111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ... ........         .+.....++.+++.+||+.+|++||++.+|+.+|+++..
T Consensus       246 ~~~-~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         246 FKL-LKEGHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHH-HHcCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            111 11111111         111223468899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.61  E-value=7.8e-16  Score=114.97  Aligned_cols=118  Identities=21%  Similarity=0.221  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......|+..|+|||++.+..++.++||||+||+ +++++|+.||......   ......
T Consensus       140 ~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~~  213 (285)
T cd05631         140 HIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER---VKREEV  213 (285)
T ss_pred             CEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc---hhHHHH
Confidence            57999999987643211   1223468999999999998889999999999987 8999999997532211   111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~  135 (181)
                      ....... ...         .+......+.+|+.+||+.||++||+     +.++++|-.
T Consensus       214 ~~~~~~~-~~~---------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~  263 (285)
T cd05631         214 DRRVKED-QEE---------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI  263 (285)
T ss_pred             HHHhhcc-ccc---------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence            1111110 001         11112346788999999999999997     899998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.61  E-value=3e-16  Score=115.35  Aligned_cols=120  Identities=30%  Similarity=0.367  Sum_probs=78.8

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......++..|++||.+....++.++|+||+|++ +++++ |..|+....   ..... 
T Consensus       133 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~-  208 (257)
T cd05116         133 YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK---GNEVT-  208 (257)
T ss_pred             eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHH-
Confidence            47999999987653322211 1111234568999999887778889999999987 89987 777764221   11111 


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        .. ........         .+.....++.+++.+||+.||++||++.+|.+.|++-
T Consensus       209 --~~-i~~~~~~~---------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         209 --QM-IESGERME---------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             --HH-HHCCCCCC---------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence              11 11111111         1112234688999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.61  E-value=2.7e-16  Score=116.96  Aligned_cols=122  Identities=25%  Similarity=0.246  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++||||+|++ +++++ |..|+...   .   ....
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~---~---~~~~  228 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI---D---PFEM  228 (280)
T ss_pred             cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC---C---HHHH
Confidence            579999999975432222111122345667999999988888999999999987 88888 87776321   1   1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      . .......  ....       .......+.+++.+||..||++|||+.+|+..|+.+.+
T Consensus       229 ~-~~~~~~~--~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         229 A-AYLKDGY--RLAQ-------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             H-HHHHcCC--CCCC-------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            1 1111110  0000       11122367899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.61  E-value=3.5e-16  Score=116.33  Aligned_cols=122  Identities=25%  Similarity=0.318  Sum_probs=79.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||...+..++.++||||+|++ +++++ |..|+....   ...+.. 
T Consensus       147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~~-  222 (279)
T cd05109         147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP---AREIPD-  222 (279)
T ss_pred             cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHH-
Confidence            479999999986543222111111234567999999988888999999999987 89887 666653211   111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                         .........         .+......+.+++.+||+.||+.||++.+++..|.....
T Consensus       223 ---~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         223 ---LLEKGERLP---------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             ---HHHCCCcCC---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence               111111100         011223467889999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.61  E-value=1.7e-15  Score=112.99  Aligned_cols=130  Identities=22%  Similarity=0.232  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........ .......|+..|+|||++.+..++.++|+||+||+ +++++|+.||.......  ......
T Consensus       138 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~--~~~~~~  214 (287)
T cd07848         138 VLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID--QLFTIQ  214 (287)
T ss_pred             cEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            479999999876532211 11223568889999999988888999999999987 89999998874321110  000000


Q ss_pred             H----------HHHhcC-CcccccCccccc------CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 W----------KLWCEG-EALELMDPVLKQ------SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~----------~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .          ...... .......+....      .........+.+|+.+||+.||++|||+.|+++|-
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp  285 (287)
T cd07848         215 KVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP  285 (287)
T ss_pred             HhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence            0          000000 000000000000      00111234688999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.61  E-value=1.6e-15  Score=113.54  Aligned_cols=126  Identities=22%  Similarity=0.307  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh--cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS--GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~--g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|||++|++ +++++  +..|+...   .......
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~---~~~~~~~  244 (296)
T cd05051         168 TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL---TDQQVIE  244 (296)
T ss_pred             ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc---ChHHHHH
Confidence            578999999875432222222223355678999999888788999999999987 88877  33443211   1111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ...............      ..+.....++.+++.+||+.||++|||+.+|++.|++
T Consensus       245 ~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         245 NAGHFFRDDGRQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             HHHhccccccccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            111110000000000      1111223468899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.61  E-value=1.6e-15  Score=116.70  Aligned_cols=122  Identities=27%  Similarity=0.390  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++.......  ......|+..|++||.+..     ...+.++|||++||+ +++++|+.||.....   ..
T Consensus       206 ~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~---~~  280 (353)
T PLN00034        206 NVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ---GD  280 (353)
T ss_pred             CEEEcccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---cc
Confidence            579999999986532211  1223478999999998743     223457999999987 899999999752111   11


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ........ .....     +    ..+.....++.+|+.+||+.||++||++.||++|-.-..
T Consensus       281 ~~~~~~~~-~~~~~-----~----~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        281 WASLMCAI-CMSQP-----P----EAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             HHHHHHHH-hccCC-----C----CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence            11111111 00000     0    011122346889999999999999999999999966543

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.61  E-value=3.7e-16  Score=115.61  Aligned_cols=120  Identities=23%  Similarity=0.301  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||...+..++.++|+|++|++ +++++ |..|+...   .....   
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~---~~~~~---  223 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV---ENSEI---  223 (272)
T ss_pred             CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC---CHHHH---
Confidence            579999999886532221111112245667999999988888999999999987 88888 56665321   11111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ............         +......+.+++.+||+.||++|||+.+|+++|++.
T Consensus       224 -~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         224 -YDYLRQGNRLKQ---------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             -HHHHHcCCCCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             111111111110         111223578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.61  E-value=4.6e-16  Score=115.93  Aligned_cols=119  Identities=29%  Similarity=0.392  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||+|++ +++++ |..|+....   ...+   
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~---~~~~---  235 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS---NQEV---  235 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC---HHHH---
Confidence            579999999976532222122223345667999999988888999999999987 89887 766653211   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ...........         .+......+.+++..||+.||++||++.+|+++|..
T Consensus       236 -~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         236 -IEMVRKRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             -HHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence             11111111111         111122367889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.60  E-value=8.9e-16  Score=113.41  Aligned_cols=119  Identities=29%  Similarity=0.407  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|+|++|++ +++++ |..|+...   ......  
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~---~~~~~~--  223 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL---NNQEVL--  223 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc---CHHHHH--
Confidence            579999999875432221111122244677999999988888999999999987 89887 77776321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       . ........         ..+......+.+++.+||..+|++||++.+|++.|++
T Consensus       224 -~-~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         224 -Q-HVTAGGRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             -H-HHhcCCcc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence             1 11111100         0111223467889999999999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.60  E-value=1.2e-15  Score=114.87  Aligned_cols=117  Identities=22%  Similarity=0.277  Sum_probs=75.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.+.   ......+.||++.|||||++....|+.|+|+||+|++ |++++|+.||...      ...++.
T Consensus       153 ~LKIADFGfAR~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~------t~~eL~  223 (429)
T KOG0595|consen  153 VLKIADFGFARFLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE------TPKELL  223 (429)
T ss_pred             eEEecccchhhhCC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc------CHHHHH
Confidence            47999999999764   3333456799999999999999999999999999976 9999999997432      122222


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........+...+...+        .....+++...++.++++|-++.+-..+.-
T Consensus       224 ~~~~k~~~~~~~~~~~~--------s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~  270 (429)
T KOG0595|consen  224 LYIKKGNEIVPVLPAEL--------SNPLRELLISLLQRNPKDRISFEDFFDHPF  270 (429)
T ss_pred             HHHhccccccCchhhhc--------cCchhhhhhHHHhcCccccCchHHhhhhhh
Confidence            22212222222222111        112445555566666667766666555543

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.60  E-value=2.1e-15  Score=113.07  Aligned_cols=126  Identities=22%  Similarity=0.273  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcC--CCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK--RNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~--~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||++................++..|+|||......++.++|+||+|++ ++++++.  .|+...   .......
T Consensus       167 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~---~~~~~~~  243 (295)
T cd05097         167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL---SDEQVIE  243 (295)
T ss_pred             cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc---ChHHHHH
Confidence            579999999875432211111222345678999999888888999999999987 7887743  333211   1111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ...............      ..+......+.+|+.+||+.||++||++.+|++.|++
T Consensus       244 ~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         244 NTGEFFRNQGRQIYL------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             HHHHhhhhccccccC------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            111111110000000      0011122468899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.60  E-value=1.8e-15  Score=112.58  Aligned_cols=123  Identities=24%  Similarity=0.357  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++......    ......|+..|++||.+.+..++.++|+|++|++ +++++|..|+...............
T Consensus       133 ~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  208 (279)
T cd06619         133 QVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL  208 (279)
T ss_pred             CEEEeeCCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence            5799999998754321    1223468889999999988888999999999987 8999999887543222111111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ...........     +..   .....++.+++.+||+.+|+.||++.+++.|..-
T Consensus       209 ~~~~~~~~~~~-----~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~  256 (279)
T cd06619         209 LQCIVDEDPPV-----LPV---GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI  256 (279)
T ss_pred             HHHHhccCCCC-----CCC---CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccc
Confidence            11111111001     000   1122357889999999999999999999998654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.60  E-value=5.4e-16  Score=115.52  Aligned_cols=135  Identities=21%  Similarity=0.216  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......... .....++..|++||.+....++.++||||+|++ +++++|..|+....... ......
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~  223 (283)
T cd05080         145 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGP  223 (283)
T ss_pred             cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcc
Confidence            479999999876532211111 111234567999999988888899999999987 89999988864321110 000000


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .............++.......+.....++.+++..||+.+|++||++.+|+..|+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         224 KQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             cccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            0000000000011111111111222335788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.60  E-value=1.9e-16  Score=123.78  Aligned_cols=114  Identities=23%  Similarity=0.299  Sum_probs=86.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++|+||||+++.+..  ......++.||+.|||||.+.+..|+..+|.||+||+ ||+..|+.||..      ..+...+
T Consensus       138 ~~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a------~si~~Lv  209 (808)
T KOG0597|consen  138 TLKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA------RSITQLV  209 (808)
T ss_pred             ceeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH------HHHHHHH
Confidence            689999999997643  2223456799999999999999999999999999998 899999999732      2233333


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ....++..           .++......|..++...+.+||..|.+-.+++.|-
T Consensus       210 ~~I~~d~v-----------~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  210 KSILKDPV-----------KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP  252 (808)
T ss_pred             HHHhcCCC-----------CCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence            33322211           12234455789999999999999999999999885

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.60  E-value=1.5e-15  Score=115.45  Aligned_cols=115  Identities=20%  Similarity=0.226  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  .......+|+..|+|||++.+..++.++||||+||+ +++++|..|+...   .   .... 
T Consensus       133 ~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~---~---~~~~-  203 (323)
T cd05571         133 HIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---D---HEKL-  203 (323)
T ss_pred             CEEEeeCCCCcccccC--CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC---C---HHHH-
Confidence            5799999998753211  112234578999999999988889999999999987 8999999887421   1   1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ......... .+         +.....++.+++.+||+.||++||     ++.+++.|-.
T Consensus       204 ~~~~~~~~~-~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~  253 (323)
T cd05571         204 FELILMEEI-RF---------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF  253 (323)
T ss_pred             HHHHHcCCC-CC---------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCC
Confidence            111111110 11         111234678899999999999999     8999998744

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.60  E-value=1.6e-15  Score=118.25  Aligned_cols=135  Identities=19%  Similarity=0.154  Sum_probs=82.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++...............|+..|+|||++....++.++|||++||+ +++++|+.|+...............
T Consensus       223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i  302 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI  302 (392)
T ss_pred             CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence            579999999876543222222234578999999999988889999999999987 8999999987443222111111111


Q ss_pred             HHHHhcCCcccccC--------------cccccCCc-------HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMD--------------PVLKQSCV-------GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~--------------~~~~~~~~-------~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ....... ......              ...+....       .....++..++.+||..||++|||+.+++.|-.-.
T Consensus       303 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~  379 (392)
T PHA03207        303 IRCMQVH-PLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT  379 (392)
T ss_pred             HHHhccC-ccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence            1100000 000000              00000000       01123567889999999999999999999996553

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.60  E-value=7.3e-16  Score=114.58  Aligned_cols=128  Identities=20%  Similarity=0.180  Sum_probs=83.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||||||.|+.+......   .+..-+..|.|||.+.+.. |+.+.||||.||+ .|++.|+..|......   .....
T Consensus       164 ~LKicDFGSAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~---dQL~e  237 (364)
T KOG0658|consen  164 VLKICDFGSAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV---DQLVE  237 (364)
T ss_pred             eEEeccCCcceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH---HHHHH
Confidence            5899999999987544333   2345688999999988754 9999999999998 7999998877543222   21111


Q ss_pred             HHHHHhcC---Ccc-------cccCcccc-----cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEG---EAL-------ELMDPVLK-----QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~---~~~-------~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .....+-.   ++.       +.-.+.+.     .........+.++|+.+++.++|.+|.++.|++.|-.
T Consensus       238 Iik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~f  308 (364)
T KOG0658|consen  238 IIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPF  308 (364)
T ss_pred             HHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchh
Confidence            11111110   000       00011111     1122233456899999999999999999999998853

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.60  E-value=6.7e-16  Score=114.01  Aligned_cols=120  Identities=28%  Similarity=0.336  Sum_probs=78.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|+|++|++ +++++ |..|+...   .....   
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~---~~~~~---  217 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM---SNQDV---  217 (266)
T ss_pred             CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC---CHHHH---
Confidence            579999999986542222111112234567999999988888999999999987 88887 77775321   11111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ..........    +     .+......+.+++.+||+.+|++||++.+|+++|+.+
T Consensus       218 -~~~~~~~~~~----~-----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         218 -IKAVEDGYRL----P-----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             -HHHHHcCCCC----C-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             1111111100    0     0111234678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.60  E-value=1.3e-15  Score=115.31  Aligned_cols=66  Identities=27%  Similarity=0.465  Sum_probs=49.6

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      ++||+|||+++....... ........|+..|+|||++.+. .++.++|+||+||+ +++++|..||..
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            589999999986532211 1122345788999999998764 47889999999987 899999988743

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.59  E-value=6.4e-16  Score=115.08  Aligned_cols=118  Identities=26%  Similarity=0.302  Sum_probs=76.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||+|++ +++++ |..|+....   ....   
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~---  233 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS---NTEA---  233 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC---HHHH---
Confidence            579999999875432211111122234678999999988888999999999987 88887 666653211   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .... ........         +......+.+++.+||+.||.+||++.+|+..|+
T Consensus       234 ~~~~-~~~~~~~~---------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         234 IECI-TQGRELER---------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHH-HcCccCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            1111 11100000         1112235789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.59  E-value=7e-16  Score=113.76  Aligned_cols=119  Identities=28%  Similarity=0.350  Sum_probs=78.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|++||.+.+..++.++|+|++|++ +++++ |..|+...      .....
T Consensus       142 ~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~------~~~~~  214 (263)
T cd05052         142 LVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQV  214 (263)
T ss_pred             cEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------CHHHH
Confidence            4799999998765322111 1111223557999999988888899999999987 89987 77775321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ........     ..    ..+.....++.+++.+||+.+|++||++.+|++.|+++
T Consensus       215 -~~~~~~~~-----~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         215 -YELLEKGY-----RM----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             -HHHHHCCC-----CC----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence             11111110     11    11111234688899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.59  E-value=5.1e-16  Score=115.32  Aligned_cols=119  Identities=26%  Similarity=0.361  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++|+||+|++ +++++ |..|+...   ...   ..
T Consensus       157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~---~~~---~~  230 (277)
T cd05062         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM---SNE---QV  230 (277)
T ss_pred             CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC---CHH---HH
Confidence            579999999875432211111112244667999999988888999999999987 89988 55555221   111   11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ............         ......+.+++.+||+.+|++||++.+++++|+.
T Consensus       231 ~-~~~~~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         231 L-RFVMEGGLLDKP---------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             H-HHHHcCCcCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            1 111111111111         1122368889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.59  E-value=2.3e-15  Score=108.61  Aligned_cols=134  Identities=22%  Similarity=0.314  Sum_probs=87.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++|+||||.+-.+......   ....|.+.|||||.+-.   ..|+.++||||+|+. +++.+|+.|+..-  +....+.
T Consensus       230 niKlCDFGIsGrlvdSkAh---trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c--~tdFe~l  304 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVDSKAH---TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC--KTDFEVL  304 (391)
T ss_pred             CEEeecccccceeeccccc---ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC--CccHHHH
Confidence            6899999998766433333   23478899999999863   358899999999985 8999999997431  1111111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCccc
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSV  151 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~~~~~~~~~~  151 (181)
                         -.... ...     |.++..  ...+..|.+++..||.+|+.+||...++++|-.-...+..+...+.|++
T Consensus       305 ---tkvln-~eP-----P~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~~dVa~WF~  367 (391)
T KOG0983|consen  305 ---TKVLN-EEP-----PLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAEVDVASWFK  367 (391)
T ss_pred             ---HHHHh-cCC-----CCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhhccHHHHHH
Confidence               11111 111     222211  1245678999999999999999999999999765433333333344443

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.59  E-value=2.8e-15  Score=116.84  Aligned_cols=135  Identities=16%  Similarity=0.097  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC----cch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG----HSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~----~~~   76 (181)
                      .+||+|||+++..... .........|+..|+|||++.+..++.++||||+||+ +++++|..|+........    ...
T Consensus       220 ~vkL~DFG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  298 (391)
T PHA03212        220 DVCLGDFGAACFPVDI-NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQ  298 (391)
T ss_pred             CEEEEeCCcccccccc-cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHH
Confidence            4799999998743211 1112234578999999999988889999999999987 899999877532211110    000


Q ss_pred             HHHHHHHHhcCC--c-----------------ccccCcccccCC--cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           77 LTYTWKLWCEGE--A-----------------LELMDPVLKQSC--VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        77 ~~~~~~~~~~~~--~-----------------~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ............  .                 .....+..+..+  ......++.+++.+||+.||++|||+.|+++|-.
T Consensus       299 l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~  378 (391)
T PHA03212        299 IKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA  378 (391)
T ss_pred             HHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence            000000000000  0                 000000000000  0112346788999999999999999999998865


Q ss_pred             cC
Q 041917          136 SD  137 (181)
Q Consensus       136 ~~  137 (181)
                      -.
T Consensus       379 f~  380 (391)
T PHA03212        379 FQ  380 (391)
T ss_pred             hc
Confidence            43

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.59  E-value=6e-16  Score=116.52  Aligned_cols=122  Identities=27%  Similarity=0.287  Sum_probs=79.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++|||++|++ +++++ |..|+..      ......
T Consensus       175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~------~~~~~~  248 (304)
T cd05101         175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEEL  248 (304)
T ss_pred             cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc------CCHHHH
Confidence            479999999986533222222222345567999999988888999999999987 88887 5555421      111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .. .........         .+......+.+++.+||+.+|++||++.+|++.|+++..
T Consensus       249 ~~-~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         249 FK-LLKEGHRMD---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HH-HHHcCCcCC---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            11 111111110         111223468889999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.59  E-value=4.7e-15  Score=117.51  Aligned_cols=134  Identities=18%  Similarity=0.160  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC-cchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG-HSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~-~~~~~~   79 (181)
                      .+||+|||+++...............|+..|++||++.+..++.++||||+||+ |++++|..++........ ......
T Consensus       298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~  377 (461)
T PHA03211        298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ  377 (461)
T ss_pred             CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence            579999999986533222212224578999999999998889999999999987 899888765422211111 111010


Q ss_pred             HHHHHhcCC--ccccc-------------------Cccc-ccCCc--HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGE--ALELM-------------------DPVL-KQSCV--GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~--~~~~~-------------------~~~~-~~~~~--~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .........  ...+.                   .+.. ...+.  ......+.+|+.+||+.||++|||+.||++|-.
T Consensus       378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~  457 (461)
T PHA03211        378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL  457 (461)
T ss_pred             HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence            111110000  00000                   0000 00000  011125778999999999999999999999854

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.59  E-value=1.5e-14  Score=110.05  Aligned_cols=115  Identities=22%  Similarity=0.204  Sum_probs=78.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......  .......|+..|+|||.+.+..++.++||||+|++ +++++|..||....      .....
T Consensus       138 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~  209 (323)
T cd05584         138 HVKLTDFGLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTI  209 (323)
T ss_pred             CEEEeeCcCCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC------HHHHH
Confidence            57999999987532211  12234578999999999988888899999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      .. ..... ..+         +......+.+++.+||+.||++||     ++.+++.|..
T Consensus       210 ~~-~~~~~-~~~---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~  258 (323)
T cd05584         210 DK-ILKGK-LNL---------PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF  258 (323)
T ss_pred             HH-HHcCC-CCC---------CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCC
Confidence            11 11111 011         111123678999999999999999     8999998754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=2.1e-15  Score=119.68  Aligned_cols=119  Identities=19%  Similarity=0.365  Sum_probs=84.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .++|+|||++...  ........+++||+.|||||++.     ..+|+.++||||||+. .+|..+..|-.      ...
T Consensus       168 dirLADFGVSAKn--~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh------eln  239 (1187)
T KOG0579|consen  168 DIRLADFGVSAKN--KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH------ELN  239 (1187)
T ss_pred             cEeeecccccccc--hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc------ccc
Confidence            4789999998653  34455567799999999999874     5679999999999986 78887765521      122


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........ .......++.|       ..+...|.+|+.+||..+|..||++.++++|..-
T Consensus       240 pMRVllKi-aKSePPTLlqP-------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv  292 (1187)
T KOG0579|consen  240 PMRVLLKI-AKSEPPTLLQP-------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFV  292 (1187)
T ss_pred             hHHHHHHH-hhcCCCcccCc-------chhhhHHHHHHHHHHhcCCccCCCHHHHhhCccc
Confidence            22222222 22233333433       3455679999999999999999999999999653

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.58  E-value=4.9e-16  Score=117.02  Aligned_cols=121  Identities=28%  Similarity=0.366  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+....++.++||||+|++ +++++ |..|+.....      ...
T Consensus       179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~------~~~  252 (302)
T cd05055         179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV------DSK  252 (302)
T ss_pred             eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc------hHH
Confidence            468999999875533222111122345677999999988888999999999987 88887 7777532110      000


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ........ ..    ...    +.....++.+++.+||..+|++||++.||++.|++.
T Consensus       253 ~~~~~~~~-~~----~~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         253 FYKLIKEG-YR----MAQ----PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHcC-Cc----CCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            01111111 00    000    111123688999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.58  E-value=4.6e-15  Score=109.49  Aligned_cols=121  Identities=25%  Similarity=0.334  Sum_probs=81.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++.......  .......|+..|+|||.+.+..++.++|+|++|++ +++++|..|+...    ........
T Consensus       144 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~----~~~~~~~~  217 (267)
T cd08228         144 VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD----KMNLFSLC  217 (267)
T ss_pred             CEEECccccceeccchh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc----cccHHHHH
Confidence            47899999987653221  11223467888999999988888899999999987 8999999886321    11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ..........        .......+.+++.+||+.+|++||++.+|++.|++.
T Consensus       218 ~~-~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         218 QK-IEQCDYPPLP--------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HH-HhcCCCCCCC--------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            11 1111110000        112234588899999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=5.4e-15  Score=111.86  Aligned_cols=115  Identities=20%  Similarity=0.247  Sum_probs=78.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......  .......|+..|+|||.+.+..++.++||||+||+ +++++|..||...      ......
T Consensus       131 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~------~~~~~~  202 (312)
T cd05585         131 HIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE------NVNEMY  202 (312)
T ss_pred             cEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC------CHHHHH
Confidence            57999999987532211  12234578999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC---CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP---SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp---t~~evl~~L~  135 (181)
                      .... ... ..+         +.....++.+++.+||+.||++||   ++.+++.|..
T Consensus       203 ~~~~-~~~-~~~---------~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~  249 (312)
T cd05585         203 RKIL-QEP-LRF---------PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPF  249 (312)
T ss_pred             HHHH-cCC-CCC---------CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence            1111 111 011         111224678899999999999997   5788887754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=4.3e-15  Score=113.34  Aligned_cols=122  Identities=20%  Similarity=0.150  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....     ......|+..|+|||.+.+..++.++||||+||+ +++++|..|+....      .....
T Consensus       139 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~  207 (333)
T cd05600         139 HIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST------PNETW  207 (333)
T ss_pred             CEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC------HHHHH
Confidence            589999999875422     2234578999999999988889999999999987 89999998874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...........  .+.... .......++.+++.+||..+|.+||++.+|+.|....
T Consensus       208 ~~i~~~~~~~~--~~~~~~-~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~  261 (333)
T cd05600         208 ENLKYWKETLQ--RPVYDD-PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK  261 (333)
T ss_pred             HHHHhcccccc--CCCCCc-cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence            11111000000  010000 0012234678899999999999999999999986543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.58  E-value=2.9e-16  Score=114.77  Aligned_cols=118  Identities=22%  Similarity=0.270  Sum_probs=85.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++-.+..  .-....++.||+.|||||++..-.|++++||||+|+. .++..|+.|+....++.....    
T Consensus       167 ~AKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM----  240 (502)
T KOG0574|consen  167 IAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM----  240 (502)
T ss_pred             hhhhhhccccchhhh--hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe----
Confidence            579999999865421  2223456899999999999999899999999999987 899999988743222211110    


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                              +..-+.|..+  -+..++.+|.++++.||-++|++|-|+.++++|-.
T Consensus       241 --------IPT~PPPTF~--KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F  285 (502)
T KOG0574|consen  241 --------IPTKPPPTFK--KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF  285 (502)
T ss_pred             --------ccCCCCCCCC--ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence                    0011112221  13455668999999999999999999999999864

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.58  E-value=6.4e-15  Score=110.51  Aligned_cols=126  Identities=23%  Similarity=0.310  Sum_probs=76.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh--cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS--GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~--g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++...............++..|++||......++.++|+||+|++ +++++  +..|+...   .......
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~---~~~~~~~  244 (296)
T cd05095         168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL---SDEQVIE  244 (296)
T ss_pred             CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc---ChHHHHH
Confidence            478999999875432211111122234567999998887888999999999987 88887  44444221   1111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..............+ +     .+..+...+.+++..||+.||++||++.+|++.|++
T Consensus       245 ~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         245 NTGEFFRDQGRQVYL-P-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHhhccccccC-C-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            111111111000000 0     011122468899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.58  E-value=1.1e-15  Score=119.98  Aligned_cols=128  Identities=23%  Similarity=0.306  Sum_probs=85.9

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh--cCCCCCCCcCCCCcchH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS--GKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~--g~~~~~~~~~~~~~~~~   77 (181)
                      |++||+|||+++-+.....+........+..|||+|.+..++++.++|+|+||+. ||+.+  ..+|+...   ....++
T Consensus       674 ~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l---t~e~vv  750 (807)
T KOG1094|consen  674 FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL---TDEQVV  750 (807)
T ss_pred             ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh---hHHHHH
Confidence            6899999999985543333322334566789999999999999999999999985 87654  44554321   111122


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      +............      .-...+..+..++.++|.+||.+|.++||++++|..+|++.
T Consensus       751 en~~~~~~~~~~~------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  751 ENAGEFFRDQGRQ------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HhhhhhcCCCCcc------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            2111111111111      11233455566788999999999999999999999999874

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.58  E-value=1.1e-15  Score=114.05  Aligned_cols=119  Identities=24%  Similarity=0.332  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++................+..|++||.+.+..++.++|+||+|++ +++++ |..|+...      .....
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~------~~~~~  241 (288)
T cd05050         168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM------AHEEV  241 (288)
T ss_pred             ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            478999999875432221111112234567999999888888999999999987 88886 65665211      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ..........         +.....++.+++.+||+.+|++|||+.||++.|++
T Consensus       242 ~~-~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         242 IY-YVRDGNVLSC---------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HH-HHhcCCCCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            11 1111111111         11123468889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.58  E-value=9.9e-16  Score=113.60  Aligned_cols=118  Identities=31%  Similarity=0.447  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+....++.++|+|++|++ +++++ |..|+...   ......  
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~---~~~~~~--  231 (277)
T cd05032         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL---SNEEVL--  231 (277)
T ss_pred             CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC---CHHHHH--
Confidence            579999999875433222111222345678999999988888899999999987 88887 76665321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                        ............     ..    ....+.+++.+||+.+|++|||+.+|+..|+
T Consensus       232 --~~~~~~~~~~~~-----~~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         232 --KFVIDGGHLDLP-----EN----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             --HHHhcCCCCCCC-----CC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence              111111111111     11    1346889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.58  E-value=8e-16  Score=113.83  Aligned_cols=116  Identities=21%  Similarity=0.332  Sum_probs=75.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++......  ........|+..|++||++.     ...++.++|+|++||+ +++++|..|+.....     
T Consensus       149 ~~~l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-----  221 (272)
T cd06637         149 EVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----  221 (272)
T ss_pred             CEEEccCCCceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-----
Confidence            4799999998754321  11223356888999999885     3357788999999987 899999988632110     


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                       ....... .........    ..    .....+.+++.+||..+|.+|||+.+|+.|-
T Consensus       222 -~~~~~~~-~~~~~~~~~----~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~  270 (272)
T cd06637         222 -MRALFLI-PRNPAPRLK----SK----KWSKKFQSFIESCLVKNHSQRPTTEQLMKHP  270 (272)
T ss_pred             -HHHHHHH-hcCCCCCCC----CC----CcCHHHHHHHHHHcCCChhhCCCHHHHhhCC
Confidence             0000100 111000111    11    1223678999999999999999999999873

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.58  E-value=3.4e-15  Score=111.36  Aligned_cols=127  Identities=22%  Similarity=0.201  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......|+..|+|||++.+..++.++||||+||+ +++++|..++....   ........
T Consensus       146 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~---~~~~~~~~  219 (288)
T cd07863         146 QVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS---EADQLGKI  219 (288)
T ss_pred             CEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC---HHHHHHHH
Confidence            47999999987653221   1123467889999999988889999999999987 88888887763211   11111111


Q ss_pred             HHHHhcCCcccc----------cCccccc---CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALEL----------MDPVLKQ---SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ...........+          +.+....   .........+.+++.+||+.||++|||+.+++.|.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp  286 (288)
T cd07863         220 FDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP  286 (288)
T ss_pred             HHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence            111100000000          0000000   00011223578899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.58  E-value=1.2e-15  Score=112.36  Aligned_cols=120  Identities=23%  Similarity=0.282  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++.......... .....++..|++||.+....++.++|+||+|++ +++++ |..|+....   .   ..
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---~---~~  206 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK---G---PE  206 (257)
T ss_pred             cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC---H---HH
Confidence            478999999875432221111 111123467999999887778889999999987 88886 777763211   1   11


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      . .........         ...+.....++.+++.+||..+|++||++.+|.+.|+..
T Consensus       207 ~-~~~~~~~~~---------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         207 V-MSFIEQGKR---------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             H-HHHHHCCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            1 111111111         111122335788999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.57  E-value=5.6e-16  Score=114.04  Aligned_cols=122  Identities=26%  Similarity=0.284  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCC--cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~--~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++.......  ........++..|+|||......++.++||||+|++ +++++|..++...     .....
T Consensus       136 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~-----~~~~~  210 (262)
T cd05058         136 TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VDSFD  210 (262)
T ss_pred             cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC-----CCHHH
Confidence            579999999875432111  011112345667999999888888899999999987 8998865543211     11111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ....... ...  ...   ..    .....+.+++..||+.+|++||++.+|+..|+++.
T Consensus       211 ~~~~~~~-~~~--~~~---~~----~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         211 ITVYLLQ-GRR--LLQ---PE----YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHhc-CCC--CCC---CC----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            1111111 100  000   01    11235889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.57  E-value=8e-16  Score=115.87  Aligned_cols=123  Identities=24%  Similarity=0.311  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++||||+|++ +++++ |..|+....      ....
T Consensus       147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------~~~~  220 (303)
T cd05110         147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------TREI  220 (303)
T ss_pred             ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHH
Confidence            479999999986543222111222344668999999988888999999999986 88887 777753211      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                       ..........  ..       +......+..++..||..+|++||++.+|+..|..+...
T Consensus       221 -~~~~~~~~~~--~~-------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         221 -PDLLEKGERL--PQ-------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             -HHHHHCCCCC--CC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence             1111111110  00       111223578899999999999999999999999876443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.57  E-value=1.2e-15  Score=115.51  Aligned_cols=123  Identities=27%  Similarity=0.324  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|++||.+.+..++.++|+|++|++ +++++ |..|+...      .....
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~------~~~~~  245 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI------PVEEL  245 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            479999999975432211111111233457999999988888999999999987 88888 66665321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      . ...........         +.....++.+++.+||+.+|++||++.+|++.|+.+...
T Consensus       246 ~-~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~  296 (314)
T cd05099         246 F-KLLREGHRMDK---------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA  296 (314)
T ss_pred             H-HHHHcCCCCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence            1 11111111111         111223677899999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.57  E-value=1e-14  Score=111.13  Aligned_cols=112  Identities=21%  Similarity=0.175  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....     .....|+..|+|||.+.+..++.++|+||+||+ +++++|..||....      .... 
T Consensus       156 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~-  223 (329)
T PTZ00263        156 HVKVTDFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT------PFRI-  223 (329)
T ss_pred             CEEEeeccCceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC------HHHH-
Confidence            5899999999764321     123478999999999988888999999999987 89999999874211      1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~  135 (181)
                      ......... .+         +......+.+++.+||+.||++|++     +.+++.|..
T Consensus       224 ~~~i~~~~~-~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~  273 (329)
T PTZ00263        224 YEKILAGRL-KF---------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPY  273 (329)
T ss_pred             HHHHhcCCc-CC---------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence            111111111 11         1111235778999999999999997     799998854

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.57  E-value=5.5e-16  Score=118.75  Aligned_cols=123  Identities=28%  Similarity=0.346  Sum_probs=79.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|++||.+....++.++|+|++|++ +++++ |..|+.....   .   ..
T Consensus       217 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~---~~  290 (343)
T cd05103         217 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---D---EE  290 (343)
T ss_pred             cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc---c---HH
Confidence            579999999876432222112222345567999999988888999999999987 88886 7666532111   0   01


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .............         +.....++.+++..||+.||++||++.+|+++|+.+..
T Consensus       291 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         291 FCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HHHHHhccCCCCC---------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            1111111111000         01112357899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.57  E-value=5.3e-15  Score=112.78  Aligned_cols=122  Identities=20%  Similarity=0.280  Sum_probs=80.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCC--CcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD--GHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~--~~~~~~   78 (181)
                      ++||+|||+++......  .......|+..|+|||++.+..++.++|+||+|++ +++++|..|+.......  ......
T Consensus       134 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~  211 (329)
T cd05618         134 HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  211 (329)
T ss_pred             CEEEeeCCccccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence            58999999987432111  12234578999999999998889999999999987 89999999975322111  111112


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHHhh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS------MSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt------~~evl~~L~  135 (181)
                      ........... .         .+......+.+++.+||+.||++|++      +.+++.|-.
T Consensus       212 ~~~~~i~~~~~-~---------~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~  264 (329)
T cd05618         212 YLFQVILEKQI-R---------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF  264 (329)
T ss_pred             HHHHHHhcCCC-C---------CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCC
Confidence            22222211111 1         11122345788999999999999998      478888743

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.57  E-value=6.7e-15  Score=110.46  Aligned_cols=124  Identities=14%  Similarity=0.090  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........     .......|+..|++||...+..++.++||||+|++ +++++|..||.....  ...
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~--~~~  241 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH--NGN  241 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc--chH
Confidence            5789999999865321110     11122468999999999988889999999999987 899999988753311  111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ...........    .+....+.   .......+.+++..||..+|++||++.+|++.|
T Consensus       242 ~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        242 LIHAAKCDFIK----RLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHhHHHHHH----Hhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            11111111000    00001000   001124688999999999999999999999876

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.57  E-value=1e-14  Score=125.21  Aligned_cols=113  Identities=23%  Similarity=0.429  Sum_probs=82.1

Q ss_pred             ccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCccccc--CCcH
Q 041917           27 VGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQ--SCVG  103 (181)
Q Consensus        27 ~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  103 (181)
                      .++..|+|||++.+..++.++||||+||+ ||+++|+.|+..... .......+............++++.+..  ....
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  917 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ  917 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence            56788999999998889999999999987 999999998743222 2233444443333223333444554432  2334


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917          104 AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus       104 ~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      .+..++.+++.+||+.||++||+|.||++.|+++...
T Consensus       918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence            5566788999999999999999999999999987554

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.57  E-value=2.3e-15  Score=114.94  Aligned_cols=129  Identities=24%  Similarity=0.298  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++......    ......|+..|+|||.+.+..++.++|+||+||+ +++++|+.|+......   ......
T Consensus       142 ~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~---~~~~~~  214 (333)
T cd06650         142 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK---ELELMF  214 (333)
T ss_pred             CEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh---HHHHHh
Confidence            4799999998754211    1123468889999999988888899999999987 8999999887432110   000000


Q ss_pred             HHHHhcCCcc----------------------------cccCcccc---cCC-cHHHHHHHHHHHHhhccCCCCCCCCHH
Q 041917           81 WKLWCEGEAL----------------------------ELMDPVLK---QSC-VGAELLKYIHIGLLCVQEDPARRPSMS  128 (181)
Q Consensus        81 ~~~~~~~~~~----------------------------~~~~~~~~---~~~-~~~~~~~~~~l~~~cl~~dp~~Rpt~~  128 (181)
                      ..........                            ...+....   ... ......++.+|+.+||+.||++|||+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~  294 (333)
T cd06650         215 GCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLK  294 (333)
T ss_pred             cCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHH
Confidence            0000000000                            00000000   000 001234578999999999999999999


Q ss_pred             HHHHHhhcC
Q 041917          129 SVVVMLASD  137 (181)
Q Consensus       129 evl~~L~~~  137 (181)
                      |++.|..-.
T Consensus       295 ell~h~~~~  303 (333)
T cd06650         295 QLMVHAFIK  303 (333)
T ss_pred             HHhhCHHHh
Confidence            999886543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=1.2e-15  Score=112.32  Aligned_cols=119  Identities=20%  Similarity=0.272  Sum_probs=78.2

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......... .....++..|+|||.+.+..++.++|+||+|++ +++++|..|+...   .  .. ..
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~---~--~~-~~  215 (263)
T cd06625         142 NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF---E--AM-AA  215 (263)
T ss_pred             CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc---c--hH-HH
Confidence            579999999875432211111 123457788999999988888899999999987 9999999886321   1  11 11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..........     .    ..+......+.+++.+||..+|.+|||+.+|+.|..
T Consensus       216 ~~~~~~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~  262 (263)
T cd06625         216 IFKIATQPTN-----P----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF  262 (263)
T ss_pred             HHHHhccCCC-----C----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence            1111111111     1    111122335788999999999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.57  E-value=5.8e-16  Score=120.94  Aligned_cols=121  Identities=25%  Similarity=0.300  Sum_probs=79.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+....++.++|+|++|++ +++++ |..|+....      ....
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~------~~~~  350 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP------MNEQ  350 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC------chHH
Confidence            479999999975432221111122356778999999988888899999999987 88887 666753221      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...........         ..+.....++.+|+.+||..+|..||++.+|+..|+++
T Consensus       351 ~~~~~~~~~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         351 FYNAIKRGYRM---------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            11111111000         01111234688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.57  E-value=2.1e-14  Score=108.93  Aligned_cols=114  Identities=21%  Similarity=0.186  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......  ......+|+..|+|||.+.+..++.++|+||+||+ +++++|..|+....      .....
T Consensus       134 ~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~------~~~~~  205 (316)
T cd05592         134 HIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED------EDELF  205 (316)
T ss_pred             CEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            57999999997542211  22234578999999999988889999999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMS-SVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~-evl~~L  134 (181)
                      .. ....      .+.+    +.....++.+++.+||+.||++||++. +++.|.
T Consensus       206 ~~-i~~~------~~~~----~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~  249 (316)
T cd05592         206 DS-ILND------RPHF----PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHP  249 (316)
T ss_pred             HH-HHcC------CCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCc
Confidence            11 1111      0111    111223577899999999999999875 676653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.57  E-value=2.1e-15  Score=110.98  Aligned_cols=118  Identities=30%  Similarity=0.385  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|++||.+....++.++|+||+|++ +++++ |..|+....   ....   
T Consensus       141 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~---~~~~---  213 (261)
T cd05072         141 MCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS---NSDV---  213 (261)
T ss_pred             cEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC---HHHH---
Confidence            4789999999765322111 1112345667999999988888889999999987 89997 777763211   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ..........    + ...    ....++.+++.+||..+|++||++.++.+.|++
T Consensus       214 -~~~~~~~~~~----~-~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         214 -MSALQRGYRM----P-RME----NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             -HHHHHcCCCC----C-CCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence             1111111100    0 001    122357889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.57  E-value=2.3e-15  Score=110.33  Aligned_cols=118  Identities=32%  Similarity=0.332  Sum_probs=78.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||.+................++..|+|||.+....++.++|+|++|++ +++++ |..|+...      .....
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~  216 (262)
T cd00192         143 VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL------SNEEV  216 (262)
T ss_pred             cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC------CHHHH
Confidence            579999999986543322122233456778999999888788899999999987 88888 46665332      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ... .......         ..+.....++.+++.+||+.+|++||++.+++.+|+
T Consensus       217 ~~~-~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         217 LEY-LRKGYRL---------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHH-HHcCCCC---------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            111 1111100         111122346889999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.56  E-value=1.1e-15  Score=115.37  Aligned_cols=121  Identities=27%  Similarity=0.309  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|++||.+.+..++.++|+||+|++ +++++ |..|+...      .....
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~------~~~~~  251 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEEL  251 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC------CHHHH
Confidence            479999999875432111111111223467999999988888899999999987 88887 66665211      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      . ..........         .+.....++.+++.+||+.+|++||++.+|++.|+.+.
T Consensus       252 ~-~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         252 F-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             H-HHHHcCCCCC---------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            1 1111111111         11122346888999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.56  E-value=3.3e-15  Score=115.33  Aligned_cols=129  Identities=20%  Similarity=0.120  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....   .......|+..|+|||++.+..++.++||||+||+ +++++|+.||......   ......
T Consensus       164 ~~kL~DfG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~~  237 (364)
T cd07875         164 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKV  237 (364)
T ss_pred             cEEEEeCCCccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH---HHHHHH
Confidence            5899999999754221   11223468889999999998889999999999987 8999999887432110   000000


Q ss_pred             HHHHh------------------cC--Ccc-----cccCccc-c--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WKLWC------------------EG--EAL-----ELMDPVL-K--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~~~~------------------~~--~~~-----~~~~~~~-~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      .....                  ..  ...     ....... .  ..........+.+++.+||+.||.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00000                  00  000     0000000 0  0001112245789999999999999999999999


Q ss_pred             Hhhc
Q 041917          133 MLAS  136 (181)
Q Consensus       133 ~L~~  136 (181)
                      |..-
T Consensus       318 hp~~  321 (364)
T cd07875         318 HPYI  321 (364)
T ss_pred             Cccc
Confidence            8543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.56  E-value=1.2e-15  Score=111.78  Aligned_cols=118  Identities=30%  Similarity=0.315  Sum_probs=74.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.................+..|++||.+....++.++|+|++|++ +++++ |..|+.....      .. 
T Consensus       132 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~------~~-  204 (252)
T cd05084         132 VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN------QQ-  204 (252)
T ss_pred             cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH------HH-
Confidence            479999999875432111111111122456999999988888899999999987 88887 6665532110      01 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........ .        ....+......+.+++.+||+.+|++||++.+|++.|+
T Consensus       205 ~~~~~~~~-~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         205 TREAIEQG-V--------RLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHcC-C--------CCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            11111110 0        00111122346888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.56  E-value=3.5e-15  Score=114.78  Aligned_cols=129  Identities=21%  Similarity=0.111  Sum_probs=79.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....   .......|+..|+|||.+.+..++.++|+||+||+ +++++|+.||......   ......
T Consensus       157 ~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~  230 (355)
T cd07874         157 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI---DQWNKV  230 (355)
T ss_pred             CEEEeeCcccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH
Confidence            5899999999754221   11233468899999999988889999999999987 8999999887432110   000000


Q ss_pred             HHH-------------------Hhc-CCcccc-----c-Ccccc--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WKL-------------------WCE-GEALEL-----M-DPVLK--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~~-------------------~~~-~~~~~~-----~-~~~~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      ...                   ... ......     . +....  ..........+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             HHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence            000                   000 000000     0 00000  0001112345789999999999999999999999


Q ss_pred             Hhhc
Q 041917          133 MLAS  136 (181)
Q Consensus       133 ~L~~  136 (181)
                      |..-
T Consensus       311 hp~~  314 (355)
T cd07874         311 HPYI  314 (355)
T ss_pred             Ccch
Confidence            8543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.56  E-value=1.3e-15  Score=111.97  Aligned_cols=118  Identities=30%  Similarity=0.430  Sum_probs=77.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|++||......++.++|+|++|++ +++++ |..|+...   ........
T Consensus       142 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~---~~~~~~~~  216 (261)
T cd05148         142 VCKVADFGLARLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM---NNHEVYDQ  216 (261)
T ss_pred             eEEEccccchhhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC---CHHHHHHH
Confidence            478999999875432211  1112334567999999888888899999999987 88887 67665321   11111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          ......         ...+......+.+++.+||+.||++|||+.++++.|+++
T Consensus       217 ----~~~~~~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         217 ----ITAGYR---------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             ----HHhCCc---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                111100         011112234678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.56  E-value=9.5e-15  Score=104.81  Aligned_cols=130  Identities=19%  Similarity=0.208  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++..........  ..+-|.+|.|||.+.+. .|+..+|+|+.||+ -|++-+..-++.   ....+....
T Consensus       139 ~lKiADFGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG---~sDidQL~~  213 (318)
T KOG0659|consen  139 QLKIADFGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG---DSDIDQLSK  213 (318)
T ss_pred             cEEeecccchhccCCCCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC---CchHHHHHH
Confidence            579999999997754333222  12568899999998765 48999999999998 577766544332   222222222


Q ss_pred             HHHHHhcCCccccc---------------CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELM---------------DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      +....+......++               .+.+. ..-.......++++.++|..||.+|.++.|+++|---.
T Consensus       214 If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~  285 (318)
T KOG0659|consen  214 IFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK  285 (318)
T ss_pred             HHHHcCCCCcccCccccccccHHHHhcCCCCccc-cccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence            22222222211111               11111 12334455679999999999999999999999886554

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.56  E-value=5.8e-15  Score=112.52  Aligned_cols=122  Identities=20%  Similarity=0.274  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCC--CcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD--GHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~--~~~~~~   78 (181)
                      .+||+|||+++.....  .......+|+..|+|||++.+..++.++|+||+||+ +++++|+.|+.......  ......
T Consensus       134 ~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~  211 (329)
T cd05588         134 HIKLTDYGMCKEGIRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED  211 (329)
T ss_pred             CEEECcCccccccccC--CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence            5799999998742211  112234578999999999998889999999999987 89999999985322111  111112


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHHhh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS------MSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt------~~evl~~L~  135 (181)
                      +.......... .+         +.....++.+++.+||+.||.+|++      +.+++.|-.
T Consensus       212 ~~~~~~~~~~~-~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~  264 (329)
T cd05588         212 YLFQVILEKQI-RI---------PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPF  264 (329)
T ss_pred             HHHHHHHcCCC-CC---------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCC
Confidence            22222221111 11         1112235788999999999999997      788988744

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.56  E-value=3.2e-15  Score=111.57  Aligned_cols=121  Identities=25%  Similarity=0.374  Sum_probs=78.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC---ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG---VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~---~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++........   .....|+..|++||.+...   .++.++|||++|++ +++++|..|+....     ...
T Consensus       146 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~  217 (288)
T cd06616         146 NIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVF  217 (288)
T ss_pred             cEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHH
Confidence            478999999875432211   1223578889999998765   57889999999987 89999998874321     111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........ ..     .+.+..........++.+++.+||+.+|++|||+.+|+.|-..
T Consensus       218 ~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~  270 (288)
T cd06616         218 DQLTQVVK-GD-----PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFI  270 (288)
T ss_pred             HHHhhhcC-CC-----CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence            11111111 10     1111111112234468899999999999999999999988543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.56  E-value=3.1e-15  Score=110.14  Aligned_cols=118  Identities=31%  Similarity=0.417  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++........ .......+..|++||......++.++|+||+|++ +++++ |..|+...      .....
T Consensus       141 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~  213 (261)
T cd05068         141 ICKVADFGLARVIKEDIYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM------TNAEV  213 (261)
T ss_pred             CEEECCcceEEEccCCccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC------CHHHH
Confidence            4799999999865421111 1111223457999999988888999999999987 89998 77665321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ..........         ..+......+.+++.+||+.+|.+||++.+|++.|+.
T Consensus       214 -~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         214 -LQQVDQGYRM---------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             -HHHHHcCCCC---------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence             1111111100         0111223468889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.56  E-value=6.4e-15  Score=113.52  Aligned_cols=61  Identities=23%  Similarity=0.284  Sum_probs=47.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNS   65 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~   65 (181)
                      .+||+|||+++.....   .......|+..|+|||++.+..++.++|+||+||+ ++++++..++
T Consensus       195 ~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        195 QVCIGDLGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CEEEecCccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            4799999998743211   11223468899999999988889999999999987 8998876654

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.56  E-value=2.6e-15  Score=109.81  Aligned_cols=118  Identities=27%  Similarity=0.293  Sum_probs=74.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|++||.+.+..++.++|+|++|++ +++++ |..|+....   ....   
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~---~~~~---  204 (251)
T cd05041         131 VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS---NQQT---  204 (251)
T ss_pred             cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC---HHHH---
Confidence            479999999875431111111111223456999999888888899999999987 89898 665553211   0011   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ........  ..       ..+......+.+++.+||..+|++||++.||++.|+
T Consensus       205 -~~~~~~~~--~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         205 -RERIESGY--RM-------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             -HHHHhcCC--CC-------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence             11111110  00       011122346889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.56  E-value=2.3e-15  Score=110.57  Aligned_cols=120  Identities=32%  Similarity=0.429  Sum_probs=78.7

Q ss_pred             CceeeceecceeecCCCCcccc-cccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANT-NRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~-~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++........... ....++..|++||.+....++.++|+||+|++ +++++ |..|+...   .......
T Consensus       133 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~---~~~~~~~  209 (257)
T cd05060         133 QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM---KGAEVIA  209 (257)
T ss_pred             cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC---CHHHHHH
Confidence            4799999998865332221111 11123457999999988888999999999987 89887 77776321   1111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .    .......         ..+......+.+++.+||..+|++||++.+|++.|+++
T Consensus       210 ~----~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         210 M----LESGERL---------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             H----HHcCCcC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            1    1111110         11111224678999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.56  E-value=3.4e-15  Score=115.99  Aligned_cols=115  Identities=22%  Similarity=0.332  Sum_probs=84.3

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      |||.|||++-.+.   ......+.||+..|-|||++.+..|+ +.+||||+||+ +.++.|+.||.-  ..+...+    
T Consensus       158 VKLTDFGFSNkf~---PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe--ANDSETL----  228 (864)
T KOG4717|consen  158 VKLTDFGFSNKFQ---PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE--ANDSETL----  228 (864)
T ss_pred             eEeeeccccccCC---CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc--ccchhhh----
Confidence            7999999987553   33445567999999999999999998 66999999998 666788888631  1111111    


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                               ..+++...  ..+..-..++.+|+..||.+||++|-+.++|+.+-+-.
T Consensus       229 ---------TmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq  274 (864)
T KOG4717|consen  229 ---------TMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ  274 (864)
T ss_pred             ---------hhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence                     12233221  23445566899999999999999999999999875543

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.56  E-value=3.2e-15  Score=113.06  Aligned_cols=65  Identities=28%  Similarity=0.476  Sum_probs=48.7

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCC
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSG   66 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~   66 (181)
                      ++||+|||+++....... ........|+..|+|||.+.+. .++.++||||+|++ +++++|..||.
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            589999999986532211 1112335678899999998764 47888999999987 89999998874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.56  E-value=4.8e-16  Score=118.53  Aligned_cols=132  Identities=20%  Similarity=0.150  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+++....... ........|+..|+|||++.+  ..++.++||||+||+ +++++|+.||.....   ....
T Consensus       141 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~---~~~~  217 (338)
T cd07859         141 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV---VHQL  217 (338)
T ss_pred             cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHH
Confidence            589999999875422111 111233578899999999865  567889999999987 899999988743211   0000


Q ss_pred             HHHHHHH-----------hcCCcccc---cCcccccCC---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLW-----------CEGEALEL---MDPVLKQSC---VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~-----------~~~~~~~~---~~~~~~~~~---~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .......           ........   +........   .......+.+++.+||+.||++||++.||+.|-.-
T Consensus       218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f  293 (338)
T cd07859         218 DLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF  293 (338)
T ss_pred             HHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence            0000000           00000000   000000000   00112356889999999999999999999998543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.56  E-value=1.1e-14  Score=112.45  Aligned_cols=118  Identities=20%  Similarity=0.176  Sum_probs=84.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+|++|||++.....   .......+|++.|+|||++.+..|+..+|+||+|++ +.++.|..||......  ....   
T Consensus       177 ~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~--~~~~---  248 (382)
T KOG0032|consen  177 RIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF--EIFL---  248 (382)
T ss_pred             cEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh--HHHH---
Confidence            589999999987643   334566799999999999999999999999999998 7788888887432111  1111   


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                        .......      .............+.+++..++..||..|+|+.++++|.+
T Consensus       249 --~i~~~~~------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  249 --AILRGDF------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             --HHHcCCC------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence              1111111      1111222233456788999999999999999999999965

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.56  E-value=1.8e-15  Score=127.30  Aligned_cols=121  Identities=22%  Similarity=0.225  Sum_probs=83.6

Q ss_pred             CceeeceecceeecCCCCcc--cccccccCCCccCccccccCc---cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEGV---FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~~---~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+|++|||.|..+.++....  ......||+.|||||++.+..   ...+.||||+||+ +||++|+.|+.....   . 
T Consensus      1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---e- 1447 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---E- 1447 (1509)
T ss_pred             cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---h-
Confidence            36999999998876543211  123568999999999997543   4578999999987 999999999843211   1 


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        ..+......+....+++         .-..+-.+|+.+||..||+.|.++.|+++|-...
T Consensus      1448 --~aIMy~V~~gh~Pq~P~---------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1448 --WAIMYHVAAGHKPQIPE---------RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             --hHHHhHHhccCCCCCch---------hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence              11111122233323322         2334567899999999999999999999986543

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.56  E-value=1.1e-15  Score=123.95  Aligned_cols=123  Identities=21%  Similarity=0.274  Sum_probs=93.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||.|||+++++..+..........-.+.|+|-|.++...|+.++|||+|||. ||+++ |..|+...   .       
T Consensus       836 hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi---~-------  905 (1177)
T KOG1025|consen  836 HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI---P-------  905 (1177)
T ss_pred             eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC---C-------
Confidence            579999999998876655554444455678999999999999999999999986 99987 66665321   1       


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                            ..++.++++...+...+..+...++-+|.+||..|+..||+++++...+.....+
T Consensus       906 ------~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  906 ------AEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             ------HHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence                  1123344444445566677777899999999999999999999999888765554

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.56  E-value=2.2e-15  Score=110.64  Aligned_cols=115  Identities=29%  Similarity=0.292  Sum_probs=76.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......     ...++..|++||.+....++.++|+|++|++ +++++ |..|+...      .....
T Consensus       140 ~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~------~~~~~  208 (256)
T cd05082         140 VAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDV  208 (256)
T ss_pred             cEEecCCccceeccccCC-----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            479999999875432111     1234567999999988888899999999987 88887 77665321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ... .......         .........+.+++.+||+.+|++|||+.+++++|+.+
T Consensus       209 ~~~-~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         209 VPR-VEKGYKM---------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHH-HhcCCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            111 1111110         11112234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.56  E-value=1.4e-14  Score=110.28  Aligned_cols=121  Identities=21%  Similarity=0.312  Sum_probs=80.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......  ......+|+..|+|||++.+..++.++|+||+|++ +++++|..||...............
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~  211 (327)
T cd05617         134 HIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL  211 (327)
T ss_pred             CEEEeccccceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence            57999999987532211  12234578999999999988889999999999987 8999999998543322222222222


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS------MSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt------~~evl~~L  134 (181)
                      ......... .+         +......+.+++.+||+.||++|++      +.+++.|-
T Consensus       212 ~~~~~~~~~-~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~  261 (327)
T cd05617         212 FQVILEKPI-RI---------PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT  261 (327)
T ss_pred             HHHHHhCCC-CC---------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence            222221111 11         1111235788999999999999998      46888775

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.55  E-value=3.8e-15  Score=109.65  Aligned_cols=118  Identities=31%  Similarity=0.486  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|+|||......++.++|+||+|++ +++++ |..|+...   ......  
T Consensus       140 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~---~~~~~~--  213 (260)
T cd05070         140 VCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM---NNREVL--  213 (260)
T ss_pred             eEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC---CHHHHH--
Confidence            4789999999765322111 1112234567999999887788899999999987 88888 66665321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ... ....         ....+......+.+++.+||..+|++|||+.++...|++
T Consensus       214 -~~~-~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         214 -EQV-ERGY---------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             -HHH-HcCC---------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             111 1110         001111223468899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.55  E-value=8.1e-15  Score=112.95  Aligned_cols=132  Identities=20%  Similarity=0.122  Sum_probs=79.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC-------
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG-------   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~-------   73 (181)
                      .+||+|||+++.....   .......|+..|+|||.+.+..++.++||||+|++ +++++|..||........       
T Consensus       161 ~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~  237 (359)
T cd07876         161 TLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ  237 (359)
T ss_pred             CEEEecCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            5799999998753221   11223467889999999998889999999999987 899999988753211000       


Q ss_pred             -----cchHH----HHHHHHhcCCcc------cccCccc-c--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           74 -----HSLLT----YTWKLWCEGEAL------ELMDPVL-K--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        74 -----~~~~~----~~~~~~~~~~~~------~~~~~~~-~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                           .....    ............      +...... .  ..........+.+++.+||..||++|||+.|++.|..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         238 LGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             cCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence                 00000    000000000000      0000000 0  0001112345788999999999999999999999865


Q ss_pred             c
Q 041917          136 S  136 (181)
Q Consensus       136 ~  136 (181)
                      -
T Consensus       318 ~  318 (359)
T cd07876         318 I  318 (359)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.55  E-value=5.1e-15  Score=110.13  Aligned_cols=118  Identities=24%  Similarity=0.216  Sum_probs=76.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......|+..|+|||.+.+..++.++|+||+||+ +++++|..|+.......  ..... 
T Consensus       133 ~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~-  206 (277)
T cd05607         133 NCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEEL-  206 (277)
T ss_pred             CEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHH-
Confidence            47999999987653221   1123468889999999988889999999999987 89999998874321111  11111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .......... ...        .....++.+++.+||+.||++||++.|+++++
T Consensus       207 ~~~~~~~~~~-~~~--------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         207 KRRTLEDEVK-FEH--------QNFTEESKDICRLFLAKKPEDRLGSREKNDDP  251 (277)
T ss_pred             HHHhhccccc-ccc--------ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence            1111111110 000        11233578999999999999999996655433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.55  E-value=8.6e-15  Score=111.56  Aligned_cols=115  Identities=18%  Similarity=0.158  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  .......+|+..|+|||.+.+..++.++|+||+||+ +++++|..||....      .....
T Consensus       133 ~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~------~~~~~  204 (328)
T cd05593         133 HIKITDFGLCKEGITD--AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLF  204 (328)
T ss_pred             cEEEecCcCCccCCCc--ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC------HHHHH
Confidence            5799999998753211  111233578999999999988889999999999987 89999999874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      . ....... .     +    +.....++.+++.+||+.||++|+     ++.++++|..
T Consensus       205 ~-~~~~~~~-~-----~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~  253 (328)
T cd05593         205 E-LILMEDI-K-----F----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF  253 (328)
T ss_pred             H-HhccCCc-c-----C----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence            1 1111100 1     1    111223678899999999999997     8999998854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.55  E-value=5.3e-15  Score=112.76  Aligned_cols=120  Identities=20%  Similarity=0.244  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....... .......|+..|+|||.+.+.. ++.++||||+||+ +++++|..|+........  . ..
T Consensus       143 ~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~-~~  218 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--Q-SE  218 (332)
T ss_pred             CEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--H-HH
Confidence            589999999875432211 1223457899999999987643 6788999999987 899999999753222111  1 11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ........      ++.+..    .....+.+++.+||+.||++||     ++.+++.|..
T Consensus       219 ~~~~~~~~------~~~~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  269 (332)
T cd05614         219 VSRRILKC------DPPFPS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF  269 (332)
T ss_pred             HHHHHhcC------CCCCCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence            11111111      111111    1223578899999999999999     7889998854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.55  E-value=1.1e-15  Score=113.78  Aligned_cols=127  Identities=24%  Similarity=0.301  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCC-------C
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK-------D   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~-------~   72 (181)
                      ++||+|||++........... .....++..|++||.+.+..++.++|+|++|++ ++++++..+.......       .
T Consensus       146 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd05081         146 RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGND  225 (284)
T ss_pred             eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccc
Confidence            579999999886533222111 111223446999999988888899999999987 8998876653211100       0


Q ss_pred             C--cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           73 G--HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        73 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .  .............         ............++.+++.+||+.+|++|||+.+|+..|+.+
T Consensus       226 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         226 KQGQMIVYHLIELLKN---------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cccccchHHHHHHHhc---------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            0  0000000000000         000011112234688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.55  E-value=7.7e-15  Score=108.55  Aligned_cols=122  Identities=23%  Similarity=0.308  Sum_probs=74.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-------ccCcccceeehhHH-HHHHh-cCCCCCCCcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-------VFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-------~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~   72 (181)
                      ++||+|||+++...............++..|+|||++...       .++.++|+||+|++ +++++ |..|+.....  
T Consensus       138 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--  215 (269)
T cd05087         138 TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD--  215 (269)
T ss_pred             cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh--
Confidence            5799999998653222111112234567789999987532       34678999999987 88886 8877743211  


Q ss_pred             CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           73 GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ....   ..... ........+.+..    .....+.+++..|| .+|++|||+.+|++.|.
T Consensus       216 -~~~~---~~~~~-~~~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         216 -EQVL---TYTVR-EQQLKLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             -HHHH---HHHhh-cccCCCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence             1111   11111 1111222222211    12235777889999 58999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.55  E-value=2.3e-15  Score=111.45  Aligned_cols=120  Identities=20%  Similarity=0.273  Sum_probs=78.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+....++.++||||+|++ +++++ |..|+...   ......  
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~---~~~~~~--  225 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV---ENSEIY--  225 (273)
T ss_pred             CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC---CHHHHH--
Confidence            579999999876432221111122345567999999888888899999999987 88888 66665321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        ...........         .......+.+++.+||+.+|++||++.+|+..|+++
T Consensus       226 --~~~~~~~~~~~---------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         226 --NYLIKGNRLKQ---------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             --HHHHcCCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              11111111000         011234688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.55  E-value=3.5e-15  Score=109.31  Aligned_cols=114  Identities=26%  Similarity=0.351  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......  ......|+..|++||+..+..++.++|+|++|++ +++++|..|+....      .....
T Consensus       139 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~  210 (256)
T cd08529         139 NVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN------QGALI  210 (256)
T ss_pred             CEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            578999999876533221  1223467888999999988888899999999987 89999998874221      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .. ........     +    +......+.+++.+||+.+|++||++.+|+++
T Consensus       211 ~~-~~~~~~~~-----~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         211 LK-IIRGVFPP-----V----SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HH-HHcCCCCC-----C----ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            11 11111111     1    11122468899999999999999999999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.55  E-value=2.8e-15  Score=110.06  Aligned_cols=116  Identities=26%  Similarity=0.342  Sum_probs=75.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....... .......++..|+|||.+.+..++.++|+|++|++ +++++ |+.|+...   .   ....
T Consensus       138 ~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~---~---~~~~  210 (256)
T cd05114         138 VVKVSDFGMTRYVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK---S---NYEV  210 (256)
T ss_pred             eEEECCCCCccccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC---C---HHHH
Confidence            479999998875432111 11112234567999999988888899999999987 89888 77665321   1   1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ..... ....  ...+       ......+.+++.+||+.+|++||++.+|++.|
T Consensus       211 ~~~i~-~~~~--~~~~-------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         211 VEMIS-RGFR--LYRP-------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHH-CCCC--CCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            11111 1111  0111       11124688999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.55  E-value=1.3e-15  Score=114.02  Aligned_cols=128  Identities=17%  Similarity=0.154  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......  ......++..|+|||.+.+ ..++.++|+||+||+ +++++|..||.....   ......
T Consensus       141 ~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~---~~~~~~  215 (288)
T cd07871         141 ELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV---KEELHL  215 (288)
T ss_pred             CEEECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            579999999875432111  1123467889999998865 457889999999987 899999988743211   111111


Q ss_pred             HHHHHhcC------------CcccccCccccc----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEG------------EALELMDPVLKQ----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~------------~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........            .......+....    ........++.+++.+||..||.+|||+.|++.|-
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp  286 (288)
T cd07871         216 IFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS  286 (288)
T ss_pred             HHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence            11100000            000000000000    00001123578999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.55  E-value=2.3e-15  Score=112.00  Aligned_cols=116  Identities=23%  Similarity=0.340  Sum_probs=74.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++.......  .......|+..|+|||.+.     ...++.++|+|++|++ +++++|..|+......  ..
T Consensus       159 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--~~  234 (282)
T cd06636         159 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--RA  234 (282)
T ss_pred             CEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH--hh
Confidence            47899999987542111  1122356788999999875     3457788999999987 8999999887422110  00


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .    .. ....     ..+...   .......+.+++.+||+.||.+||++.||++|-
T Consensus       235 ~----~~-~~~~-----~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~  280 (282)
T cd06636         235 L----FL-IPRN-----PPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHP  280 (282)
T ss_pred             h----hh-HhhC-----CCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence            0    00 0000     001110   111234688999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.55  E-value=1.2e-14  Score=110.35  Aligned_cols=115  Identities=20%  Similarity=0.150  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  ........|+..|+|||++.+..++.++|+||+|++ +++++|+.|+....      .....
T Consensus       134 ~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~------~~~~~  205 (321)
T cd05591         134 HCKLADFGMCKEGILN--GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN------EDDLF  205 (321)
T ss_pred             CEEEeecccceecccC--CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC------HHHHH
Confidence            5799999998753221  112234578999999999988889999999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-------CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-------SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-------t~~evl~~L~  135 (181)
                      . .......   ..       +.....++.+++.+||..||++|+       ++.+++.|..
T Consensus       206 ~-~i~~~~~---~~-------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~  256 (321)
T cd05591         206 E-SILHDDV---LY-------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF  256 (321)
T ss_pred             H-HHHcCCC---CC-------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence            1 1111111   00       111224678899999999999999       8999998854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.55  E-value=1.1e-15  Score=119.42  Aligned_cols=123  Identities=28%  Similarity=0.334  Sum_probs=81.9

Q ss_pred             CceeeceecceeecCCCCccccc-ccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTN-RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~-~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++.-.   ...... ...-+..|+|||.+....|+.++|||+|||+ ||+.+ |..|+...      ....
T Consensus       300 ~vKISDFGLs~~~~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~------~~~~  370 (474)
T KOG0194|consen  300 VVKISDFGLSRAGS---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM------KNYE  370 (474)
T ss_pred             eEEeCccccccCCc---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC------CHHH
Confidence            36999999987532   111111 1134678999999999999999999999997 89877 56665321      1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      ........+         .+...+......+..++..||..+|++||+|.+|.+.|+.+.....
T Consensus       371 v~~kI~~~~---------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  371 VKAKIVKNG---------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HHHHHHhcC---------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            111111111         1111122333467778889999999999999999999998766544

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.54  E-value=3e-15  Score=110.56  Aligned_cols=117  Identities=22%  Similarity=0.302  Sum_probs=74.1

Q ss_pred             CceeeceecceeecCCC-CcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQ-NEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...... .........++..|+|||.+.+..++.++|+|++|++ +++++|..|+...     ... ..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~-----~~~-~~  217 (266)
T cd06651         144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY-----EAM-AA  217 (266)
T ss_pred             CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc-----chH-HH
Confidence            57999999987543211 1111123457888999999988888899999999987 8999999887421     111 11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........     ..+.+    +......+..++ +||..+|++||+++||+.|-
T Consensus       218 ~~~~~~~~-----~~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp  262 (266)
T cd06651         218 IFKIATQP-----TNPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLRHP  262 (266)
T ss_pred             HHHHhcCC-----CCCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence            11111100     01111    111222345555 69999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.54  E-value=2.7e-14  Score=105.20  Aligned_cols=122  Identities=25%  Similarity=0.325  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++.........  .....++..|++||.+.+..++.++|+|++|++ +++++|..|+....    .......
T Consensus       144 ~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~  217 (267)
T cd08224         144 VVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLC  217 (267)
T ss_pred             cEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHH
Confidence            4789999998754322111  123467888999999988888899999999987 89999998863211    1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .. ...........        ......+.+++.+||..+|++||++.+|++.|+++.
T Consensus       218 ~~-~~~~~~~~~~~--------~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         218 KK-IEKCDYPPLPA--------DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             hh-hhcCCCCCCCh--------hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            11 11111101110        122335788999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.54  E-value=2.9e-15  Score=110.17  Aligned_cols=117  Identities=26%  Similarity=0.308  Sum_probs=75.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++........ ......++..|++||......++.++|+|++|++ +++++ |..|+....   .   ...
T Consensus       138 ~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~---~---~~~  210 (256)
T cd05113         138 CVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN---N---SET  210 (256)
T ss_pred             CEEECCCccceecCCCcee-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC---H---HHH
Confidence            5799999998754322111 1111234567999999987788899999999987 88887 777753211   1   111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ... ........         .+......+.+++.+||+.+|.+||++.+|+..|+
T Consensus       211 ~~~-~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         211 VEK-VSQGLRLY---------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHH-HhcCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            111 11111100         01112346889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.54  E-value=2.3e-15  Score=111.85  Aligned_cols=127  Identities=25%  Similarity=0.299  Sum_probs=80.4

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc-----
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH-----   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~-----   74 (181)
                      .+||+|||++........... .....++..|++||......++.++|+|++|++ +++++|..|+.........     
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~  226 (284)
T cd05038         147 LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA  226 (284)
T ss_pred             CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc
Confidence            579999999886542222111 111234556999999888888899999999987 8999998775332111100     


Q ss_pred             ---chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           75 ---SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                         ..............         ....+.....++.+++.+||+.+|++|||+.+|++.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         227 QGQMIVTRLLELLKEGE---------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cccccHHHHHHHHHcCC---------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence               00111111111110         0011112234688999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.54  E-value=1.1e-14  Score=110.69  Aligned_cols=115  Identities=21%  Similarity=0.196  Sum_probs=78.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  ........|+..|+|||.+.+..++.++|+||+||+ +++++|..||....      .... 
T Consensus       134 ~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~-  204 (320)
T cd05590         134 HCKLADFGMCKEGIFN--GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN------EDDL-  204 (320)
T ss_pred             cEEEeeCCCCeecCcC--CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHH-
Confidence            5799999998753211  111234578999999999988888999999999987 89999999874221      1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM------SSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~------~evl~~L~  135 (181)
                      ......... ..         +.....++.+++.+||+.||++|+++      .+++.|-.
T Consensus       205 ~~~i~~~~~-~~---------~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~  255 (320)
T cd05590         205 FEAILNDEV-VY---------PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF  255 (320)
T ss_pred             HHHHhcCCC-CC---------CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence            111111111 00         11122367889999999999999998      78887744

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.54  E-value=4.1e-15  Score=109.85  Aligned_cols=120  Identities=30%  Similarity=0.391  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||++........... ......+..|++||.+....++.++|+|++|++ +++++ |..|+....   ..   .
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~---~~---~  218 (268)
T cd05063         145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS---NH---E  218 (268)
T ss_pred             cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC---HH---H
Confidence            579999999876532211111 111122456999999988888899999999987 88887 888863211   11   1


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      . ........  ..  +     ........+.+++.+||+.+|++||++.+|++.|+++
T Consensus       219 ~-~~~i~~~~--~~--~-----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         219 V-MKAINDGF--RL--P-----APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             H-HHHHhcCC--CC--C-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1 11111110  00  0     0111224678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.54  E-value=1.3e-14  Score=110.08  Aligned_cols=114  Identities=23%  Similarity=0.210  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .......+|+..|+|||++.+..++.++||||+|++ +++++|..|+....   .   ... 
T Consensus       134 ~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~---~---~~~-  204 (316)
T cd05620         134 HIKIADFGMCKENVFG--DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD---E---DEL-  204 (316)
T ss_pred             CEEeCccCCCeecccC--CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---H---HHH-
Confidence            5799999998743211  112234578999999999998889999999999987 89999999874221   1   111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-HHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-SSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-~evl~~L  134 (181)
                      .......      .+..    +.....++.+++.+||+.||++|+++ .+++.|.
T Consensus       205 ~~~~~~~------~~~~----~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~  249 (316)
T cd05620         205 FESIRVD------TPHY----PRWITKESKDILEKLFERDPTRRLGVVGNIRGHP  249 (316)
T ss_pred             HHHHHhC------CCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence            1111111      0111    11122357889999999999999998 4777664

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.54  E-value=3.5e-15  Score=110.97  Aligned_cols=122  Identities=22%  Similarity=0.314  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+....++.++|+|++|++ +++++ |..|+....      ....
T Consensus       147 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~  220 (279)
T cd05057         147 HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP------AVEI  220 (279)
T ss_pred             eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC------HHHH
Confidence            479999999986543222211111223567999999887888899999999987 88887 887763221      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .. ........         ..+......+.+++.+||..+|..||++.+++..|.....
T Consensus       221 ~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         221 PD-LLEKGERL---------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HH-HHhCCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            11 11111110         0111122357889999999999999999999999988644

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.54  E-value=5.5e-15  Score=112.41  Aligned_cols=115  Identities=19%  Similarity=0.219  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......  ......|+..|+|||++.+..++.++||||+||+ +++++|..|+....   ....    
T Consensus       134 ~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~---~~~~----  204 (325)
T cd05594         134 HIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKL----  204 (325)
T ss_pred             CEEEecCCCCeecCCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC---HHHH----
Confidence            589999999875322111  1223578999999999988889999999999987 89999998874211   1111    


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ........ ..+         +.....++.+++.+||+.||++|+     ++.++++|..
T Consensus       205 ~~~i~~~~-~~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~  254 (325)
T cd05594         205 FELILMEE-IRF---------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF  254 (325)
T ss_pred             HHHHhcCC-CCC---------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence            11111111 011         111223678899999999999997     9999998854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.54  E-value=3e-15  Score=112.41  Aligned_cols=120  Identities=27%  Similarity=0.217  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......   ........+..|++||......++.++||||+|++ +++++ |..|+....      ....
T Consensus       157 ~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~------~~~~  227 (297)
T cd05089         157 ASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT------CAEL  227 (297)
T ss_pred             eEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHH
Confidence            4789999998632110   01111123456999999888888999999999987 88886 777763211      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ... .....     ....    +......+.+|+.+||+.+|.+||++.+|++.|.++...
T Consensus       228 ~~~-~~~~~-----~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         228 YEK-LPQGY-----RMEK----PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             HHH-HhcCC-----CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            111 11110     0001    111224678899999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.54  E-value=1.1e-14  Score=110.65  Aligned_cols=115  Identities=21%  Similarity=0.202  Sum_probs=78.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  ........|+..|+|||.+.+..++.++|+||+||+ +++++|..|+....   .....   
T Consensus       133 ~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---~~~~~---  204 (323)
T cd05595         133 HIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HERLF---  204 (323)
T ss_pred             CEEecccHHhccccCC--CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC---HHHHH---
Confidence            5799999998743211  111223578999999999988889999999999987 89999998874211   11111   


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      . ....... .+         +.....++.+++.+||+.||++|+     ++.++++|-.
T Consensus       205 ~-~~~~~~~-~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~  253 (323)
T cd05595         205 E-LILMEEI-RF---------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF  253 (323)
T ss_pred             H-HHhcCCC-CC---------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCC
Confidence            1 1111110 11         111234678899999999999998     8999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.54  E-value=1e-14  Score=110.69  Aligned_cols=115  Identities=21%  Similarity=0.159  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  .......+|+..|+|||++.+..++.++|+||+||+ +++++|..|+....      .... 
T Consensus       134 ~~kl~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~------~~~~-  204 (318)
T cd05570         134 HIKIADFGMCKEGILG--GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD------EDEL-  204 (318)
T ss_pred             cEEecccCCCeecCcC--CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC------HHHH-
Confidence            5799999998743211  111233568899999999998889999999999987 89999999874221      1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L~  135 (181)
                      ......... .     .    +......+.+++.+||+.||++||++     .+++.|-.
T Consensus       205 ~~~i~~~~~-~-----~----~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~  254 (318)
T cd05570         205 FQSILEDEV-R-----Y----PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPF  254 (318)
T ss_pred             HHHHHcCCC-C-----C----CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCC
Confidence            111111111 0     0    11122467899999999999999999     99988743

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=7.3e-15  Score=113.38  Aligned_cols=131  Identities=21%  Similarity=0.197  Sum_probs=81.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+||||+++........ .+..+-|.+|.+||.+.+.. |+..+|+||.||| .|+..|+..+....+.   .....
T Consensus       256 ~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv---eQl~k  331 (560)
T KOG0600|consen  256 VLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV---EQLHK  331 (560)
T ss_pred             CEEeccccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH---HHHHH
Confidence            58999999999764433222 23345689999999998754 9999999999998 7888888766432221   12222


Q ss_pred             HHHHHhcCCcc----------cccCcccccCC-----cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEAL----------ELMDPVLKQSC-----VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      +.+........          ..+.+...-..     ........++|+..+|..||.+|.||.+++.+=..
T Consensus       332 IfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF  403 (560)
T KOG0600|consen  332 IFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF  403 (560)
T ss_pred             HHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence            22211111100          11111111000     01112357889999999999999999999977544

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1.8e-14  Score=113.51  Aligned_cols=113  Identities=27%  Similarity=0.384  Sum_probs=79.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .|||+|||.+..+.      ...+++||+.|||||++..   +.|+.++||||+|+. .++...+.|..   .++...  
T Consensus       164 ~VKLaDFGSAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF---nMNAMS--  232 (948)
T KOG0577|consen  164 LVKLADFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF---NMNAMS--  232 (948)
T ss_pred             eeeeccccchhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc---CchHHH--
Confidence            47999999987642      2356899999999999863   669999999999986 77777766642   222222  


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ...... ..+     .|.+.   ...+...|..|+..||++-|.+|||..+++.|..
T Consensus       233 -ALYHIA-QNe-----sPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f  280 (948)
T KOG0577|consen  233 -ALYHIA-QNE-----SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF  280 (948)
T ss_pred             -HHHHHH-hcC-----CCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence             112211 111     12221   2355667889999999999999999999988753

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=8.2e-15  Score=109.47  Aligned_cols=119  Identities=22%  Similarity=0.190  Sum_probs=79.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +++|+|||++.......   ......|+..|++||.+.+..++.++|||++|++ +++++|..||....   ........
T Consensus       140 ~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~---~~~~~~~~  213 (285)
T cd05605         140 HIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK---EKVKREEV  213 (285)
T ss_pred             CEEEeeCCCceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc---hhhHHHHH
Confidence            57899999987643211   1123468889999999988888999999999987 89999999874321   11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~  136 (181)
                      ....... .     .    ..+......+.+|+.+||+.||++||     ++.+++.|..-
T Consensus       214 ~~~~~~~-~-----~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05605         214 ERRVKED-Q-----E----EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFF  264 (285)
T ss_pred             HHHhhhc-c-----c----ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCc
Confidence            1111100 0     0    11112234578899999999999999     89999888543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.53  E-value=1.9e-14  Score=109.41  Aligned_cols=115  Identities=23%  Similarity=0.175  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  ........|+..|+|||.+.+..++.++|+||+||+ +++++|..|+....      .....
T Consensus       139 ~~kL~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~------~~~~~  210 (324)
T cd05589         139 FVKIADFGLCKEGMGF--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD------EEEVF  210 (324)
T ss_pred             cEEeCcccCCccCCCC--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            5799999998643211  112234578999999999988888999999999987 89999999874221      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      .. ...... ..         +......+.+++.+||+.||.+||     ++.++++|..
T Consensus       211 ~~-i~~~~~-~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~  259 (324)
T cd05589         211 DS-IVNDEV-RY---------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPF  259 (324)
T ss_pred             HH-HHhCCC-CC---------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCC
Confidence            11 111111 00         111123578899999999999999     6888888753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.53  E-value=5e-15  Score=109.47  Aligned_cols=116  Identities=23%  Similarity=0.314  Sum_probs=78.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......|+..|++||.+.+..++.++|+|++|++ +++++|..|+...      ......
T Consensus       152 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~------~~~~~~  222 (269)
T cd08528         152 KVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST------NMLSLA  222 (269)
T ss_pred             cEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc------CHHHHH
Confidence            57999999987643221   2233467888999999988888899999999987 9999998876321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ..........    ..    .....+.+++.+||+.||++||++.||..++.
T Consensus       223 ~~-~~~~~~~~~~----~~----~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         223 TK-IVEAVYEPLP----EG----MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HH-HhhccCCcCC----cc----cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            11 1111111110    00    11246788999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.53  E-value=1.7e-14  Score=109.37  Aligned_cols=113  Identities=24%  Similarity=0.232  Sum_probs=76.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  ........|+..|+|||++.+..++.++|+||+||+ +++++|..|+....      .....
T Consensus       134 ~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~  205 (316)
T cd05619         134 HIKIADFGMCKENMLG--DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD------EEELF  205 (316)
T ss_pred             CEEEccCCcceECCCC--CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            5799999998753211  111234578999999999988889999999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMS-SVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~-evl~~  133 (181)
                       .......      +..    +.....++.+++.+||+.||++|+++. +++.|
T Consensus       206 -~~i~~~~------~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05619         206 -QSIRMDN------PCY----PRWLTREAKDILVKLFVREPERRLGVKGDIRQH  248 (316)
T ss_pred             -HHHHhCC------CCC----CccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence             1111110      101    111223578899999999999999997 77765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.53  E-value=5.3e-15  Score=108.68  Aligned_cols=116  Identities=28%  Similarity=0.319  Sum_probs=74.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++........ ......++..|++||.+.+..++.++|+|++|++ +++++ |..|+....   ..   ..
T Consensus       138 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~---~~---~~  210 (256)
T cd05059         138 VVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS---NS---EV  210 (256)
T ss_pred             cEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC---HH---HH
Confidence            4799999998754321111 1111123457999999988888999999999987 88888 666653211   11   11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ... .....     ..    ..+......+.+++.+||+.+|++||++.+|++.|
T Consensus       211 ~~~-~~~~~-----~~----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         211 VES-VSAGY-----RL----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHH-HHcCC-----cC----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            111 11110     00    11111234688999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.53  E-value=1.2e-14  Score=109.50  Aligned_cols=132  Identities=16%  Similarity=0.127  Sum_probs=77.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......  .......++..|+|||++.+. .++.++||||+||+ +++++|..||.....  .......
T Consensus       141 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~  216 (303)
T cd07869         141 ELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLER  216 (303)
T ss_pred             CEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHH
Confidence            47999999987542211  112234678899999988653 47788999999987 899999998753211  0001110


Q ss_pred             HHHHHhcCCcc--------cccCcc-cccCCc---H------HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEAL--------ELMDPV-LKQSCV---G------AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~--------~~~~~~-~~~~~~---~------~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...........        ....+. .....+   .      .....+.+++.+||+.||++|||+.|++.|-.-.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~  292 (303)
T cd07869         217 IFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS  292 (303)
T ss_pred             HHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence            00000000000        000000 000000   0      0113567899999999999999999999886543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=8.6e-15  Score=108.54  Aligned_cols=118  Identities=22%  Similarity=0.337  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++........  ......++..|++||.+.+..++.++|+|++|++ +++++|..|+....   .   ....
T Consensus       136 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~---~---~~~~  207 (274)
T cd06609         136 DVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH---P---MRVL  207 (274)
T ss_pred             CEEEcccccceeeccccc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc---h---HHHH
Confidence            478999999986643221  1223467788999999988888999999999987 89999998863221   1   1111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ............        .....+.+++.+||..+|++||++++|+.|-.-
T Consensus       208 ~~-~~~~~~~~~~~~--------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~  254 (274)
T cd06609         208 FL-IPKNNPPSLEGN--------KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFI  254 (274)
T ss_pred             HH-hhhcCCCCCccc--------ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhh
Confidence            11 111111111110        022357889999999999999999999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.52  E-value=5.9e-15  Score=108.12  Aligned_cols=117  Identities=25%  Similarity=0.328  Sum_probs=77.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......++..|++||.+.+..++.++|+|++|++ +++++|+.|+.......      ..
T Consensus       137 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~------~~  208 (256)
T cd06612         137 QAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR------AI  208 (256)
T ss_pred             cEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh------hh
Confidence            478999999876532221  1223457788999999988888899999999987 89999998864321110      00


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .. ..     ....+..  ..+......+.+++.+||+.+|++||++.+|+.|-
T Consensus       209 ~~-~~-----~~~~~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~  254 (256)
T cd06612         209 FM-IP-----NKPPPTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHP  254 (256)
T ss_pred             hh-hc-----cCCCCCC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCC
Confidence            00 00     0000000  11112234688899999999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.52  E-value=1.3e-14  Score=108.36  Aligned_cols=119  Identities=23%  Similarity=0.225  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++........   .....|+..|+|||.+.+..++.++|+||+|++ +++++|..|+...........   .
T Consensus       140 ~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~---~  213 (285)
T cd05630         140 HIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE---V  213 (285)
T ss_pred             CEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH---H
Confidence            478999999875432111   123468899999999988889999999999987 899999998743211110000   0


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~~  136 (181)
                      ......  ..    ...    .......+.+++..||+.||++|||     +.|++.|-.-
T Consensus       214 ~~~~~~--~~----~~~----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~  264 (285)
T cd05630         214 ERLVKE--VQ----EEY----SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLF  264 (285)
T ss_pred             Hhhhhh--hh----hhc----CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhh
Confidence            000000  00    001    1112235788999999999999999     8999987553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=1.2e-14  Score=108.89  Aligned_cols=113  Identities=21%  Similarity=0.161  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....|+..|+|||.+.+..++.++||||+||+ +++++|..|+...   .   .....
T Consensus       139 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~---~---~~~~~  207 (291)
T cd05612         139 HIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD---N---PFGIY  207 (291)
T ss_pred             CEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---C---HHHHH
Confidence            5799999998754221     123468899999999988888999999999987 8999999887421   1   11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~~  136 (181)
                       ........ .+         +......+.+++.+||+.||.+|++     +.+++.|.+-
T Consensus       208 -~~i~~~~~-~~---------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~  257 (291)
T cd05612         208 -EKILAGKL-EF---------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF  257 (291)
T ss_pred             -HHHHhCCc-CC---------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence             11111110 11         1111235788999999999999995     9999988654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.52  E-value=8.2e-15  Score=108.18  Aligned_cols=119  Identities=22%  Similarity=0.343  Sum_probs=75.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++.......  .......|+..|++||.+.   ...++.++|+||+|++ +++++|..|+........  . 
T Consensus       144 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--~-  218 (267)
T cd06646         144 DVKLADFGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--L-  218 (267)
T ss_pred             CEEECcCccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--h-
Confidence            47999999988653211  1122346788899999874   3346778999999987 899999887632111000  0 


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                          ......   ....+....  .......+.+++.+||..+|++||++.+|++||
T Consensus       219 ----~~~~~~---~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         219 ----FLMSKS---NFQPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             ----eeeecC---CCCCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence                000000   000011110  112234688999999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.52  E-value=8.4e-15  Score=107.44  Aligned_cols=115  Identities=22%  Similarity=0.331  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......++..|+|||...+..++.++|+|++|++ +++++|..|+...      ......
T Consensus       140 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~------~~~~~~  211 (257)
T cd08223         140 IIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK------DMNSLV  211 (257)
T ss_pred             cEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHH
Confidence            578999999886533221  2233467888999999988888899999999987 8999998876321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .... ......         .+......+.+++.+||+.+|++||++.+++.|-
T Consensus       212 ~~~~-~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~  255 (257)
T cd08223         212 YRII-EGKLPP---------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQP  255 (257)
T ss_pred             HHHH-hcCCCC---------CccccCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence            1111 111101         1112234688999999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.52  E-value=3.5e-15  Score=110.47  Aligned_cols=117  Identities=29%  Similarity=0.252  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.....   .........+..|++||++....++.++|+||+|++ +++++ |..|+...   .   ....
T Consensus       150 ~~kl~dfgl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~---~---~~~~  220 (270)
T cd05047         150 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM---T---CAEL  220 (270)
T ss_pred             eEEECCCCCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc---C---HHHH
Confidence            478999999853211   101111123456999999888888899999999987 88886 77776321   1   1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ... ........         .+......+.+++.+||+.+|.+||++.+++..|.++
T Consensus       221 ~~~-~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         221 YEK-LPQGYRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHH-HhCCCCCC---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            111 11110000         0111223578999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.52  E-value=5.4e-15  Score=108.46  Aligned_cols=117  Identities=32%  Similarity=0.347  Sum_probs=75.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........ .......++..|++||.+.+..++.++|+|++|++ +++++ |..|+...      .....
T Consensus       138 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~  210 (256)
T cd05112         138 VVKVSDFGMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR------SNSEV  210 (256)
T ss_pred             eEEECCCcceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC------CHHHH
Confidence            478999999875432211 11112234567999999988888889999999987 88887 77765321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ... .....  ....+.       .....+.+|+.+||+.+|++||++.+|+++|+
T Consensus       211 ~~~-~~~~~--~~~~~~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         211 VET-INAGF--RLYKPR-------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHH-HhCCC--CCCCCC-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            111 11110  111111       12246889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.52  E-value=5.1e-14  Score=103.34  Aligned_cols=119  Identities=29%  Similarity=0.374  Sum_probs=77.5

Q ss_pred             CceeeceecceeecCCCCc-ccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++........ .......++..|++||.+....++.++|+|++|++ +++++ |..|+...      ....
T Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~  208 (257)
T cd05040         135 KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL------SGSQ  208 (257)
T ss_pred             EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC------CHHH
Confidence            4799999998865332111 11112346678999999888888999999999987 89888 88776321      1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ...........  ...       +......+.+++.+||+.+|++||++.+|+..|.
T Consensus       209 ~~~~~~~~~~~--~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         209 ILKKIDKEGER--LER-------PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHhcCCc--CCC-------CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            11111111110  001       1112246888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.52  E-value=3.1e-15  Score=117.87  Aligned_cols=114  Identities=21%  Similarity=0.302  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehh-HHHHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~g-v~~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .|||+|+|||..+..    ......+||+-|||||... ..|+..+|||+|| |++||+++..|+.  ...+...++..+
T Consensus       184 ~VKIGDLGLAtl~r~----s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs--EC~n~AQIYKKV  256 (632)
T KOG0584|consen  184 EVKIGDLGLATLLRK----SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS--ECTNPAQIYKKV  256 (632)
T ss_pred             ceeecchhHHHHhhc----cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh--hhCCHHHHHHHH
Confidence            589999999987532    2223478999999999876 7799999999999 5699999998863  222222222111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                          -.+.....+...        .-.++..|+.+|+.. .+.|+|+.|+|.+-.
T Consensus       257 ----~SGiKP~sl~kV--------~dPevr~fIekCl~~-~~~R~sa~eLL~d~F  298 (632)
T KOG0584|consen  257 ----TSGIKPAALSKV--------KDPEVREFIEKCLAT-KSERLSAKELLKDPF  298 (632)
T ss_pred             ----HcCCCHHHhhcc--------CCHHHHHHHHHHhcC-chhccCHHHHhhChh
Confidence                111111111110        113678899999999 999999999998743

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.52  E-value=2.9e-15  Score=112.82  Aligned_cols=120  Identities=23%  Similarity=0.262  Sum_probs=84.1

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      +++||+|=.+++-+-....+......-.+..||++|.+....|+..+|+|+||++ ||+++ |+.|+.-.   +     -
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI---D-----P  504 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI---D-----P  504 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc---C-----H
Confidence            4689999888885543222222222345678999999999999999999999997 99987 45553111   0     0


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      +        +....+..+.+...+.++..++..+|.=||..+|++||++.|++.-|..
T Consensus       505 f--------Em~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  505 F--------EMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             H--------HHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            0        1112233334444455666789999999999999999999999988864

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.52  E-value=9.5e-15  Score=108.07  Aligned_cols=121  Identities=23%  Similarity=0.279  Sum_probs=79.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......... .....++..|++||.+....++.++|+||+|++ +++++ |..|+....   ....   
T Consensus       145 ~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~---~~~~---  217 (270)
T cd05056         145 CVKLGDFGLSRYLEDESYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK---NNDV---  217 (270)
T ss_pred             CeEEccCceeeeccccccee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC---HHHH---
Confidence            57999999987654321111 112234567999999887788899999999987 88775 887763221   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ... ........     ..    ......+.+++.+||..+|.+|||+.+++..|+++..
T Consensus       218 ~~~-~~~~~~~~-----~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         218 IGR-IENGERLP-----MP----PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHH-HHcCCcCC-----CC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            111 11111111     11    1122468889999999999999999999999988644

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.52  E-value=6.4e-15  Score=110.99  Aligned_cols=120  Identities=27%  Similarity=0.208  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....   ........++..|++||.+....++.++||||+|++ +++++ |..|+...   ...   ..
T Consensus       162 ~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~---~~~---~~  232 (303)
T cd05088         162 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM---TCA---EL  232 (303)
T ss_pred             cEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccC---ChH---HH
Confidence            579999999863211   001111123557999999887778899999999987 88987 77776321   111   11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ... .....     ..    ..+......+.+++.+||+.+|++||++.+++..|.++...
T Consensus       233 ~~~-~~~~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         233 YEK-LPQGY-----RL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             HHH-HhcCC-----cC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            111 11100     00    00111223578899999999999999999999998875443

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=2.4e-14  Score=109.81  Aligned_cols=121  Identities=21%  Similarity=0.231  Sum_probs=79.2

Q ss_pred             CceeeceecceeecCCC---------------------------CcccccccccCCCccCccccccCccCcccceeehhH
Q 041917            2 NPKISDFGMARIFGGNQ---------------------------NEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV   54 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~---------------------------~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv   54 (181)
                      .+||+|||++.......                           .........|+..|+|||.+.+..++.++||||+||
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  218 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGV  218 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecch
Confidence            57999999987643222                           001122356899999999999888999999999998


Q ss_pred             H-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-HHHHHH
Q 041917           55 L-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-MSSVVV  132 (181)
Q Consensus        55 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-~~evl~  132 (181)
                      + +++++|+.|+....      ....................       ......+.+++.+||. ||.+|++ +.+++.
T Consensus       219 il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~-------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         219 ILYEMLYGFPPFYSDT------LQETYNKIINWKESLRFPPD-------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             hhhhhccCCCCCCCCC------HHHHHHHHhccCCcccCCCC-------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence            7 89999999874321      11111111110000011000       0023467889999997 9999999 999999


Q ss_pred             Hhhc
Q 041917          133 MLAS  136 (181)
Q Consensus       133 ~L~~  136 (181)
                      |..-
T Consensus       285 hp~~  288 (350)
T cd05573         285 HPFF  288 (350)
T ss_pred             CCCc
Confidence            8643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.52  E-value=1.9e-14  Score=106.24  Aligned_cols=121  Identities=24%  Similarity=0.326  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++.........  .....|+..|++||.+....++.++|+|++|++ +++++|..|+...    ........
T Consensus       144 ~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~----~~~~~~~~  217 (267)
T cd08229         144 VVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD----KMNLYSLC  217 (267)
T ss_pred             CEEECcchhhhccccCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc----cchHHHHh
Confidence            4789999988754322211  223467888999999988888889999999987 8999999886321    11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      . .....     ..+...   .......+.+++.+||+.||++|||+.+|++.+...
T Consensus       218 ~-~~~~~-----~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         218 K-KIEQC-----DYPPLP---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             h-hhhcC-----CCCCCC---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            1 11000     001010   112334688899999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.52  E-value=1.2e-14  Score=107.24  Aligned_cols=119  Identities=26%  Similarity=0.401  Sum_probs=77.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||.+........ .......++..|++||......++.++|+|++|++ +++++ |..|+....   ..   ..
T Consensus       140 ~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~---~~---~~  212 (262)
T cd05071         140 VCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV---NR---EV  212 (262)
T ss_pred             cEEeccCCceeecccccc-ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---hH---HH
Confidence            478999999875432211 11112345667999999888888999999999987 89998 555553211   11   11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ..... .....         .........+.+++.+||+.+|++||++.++++.|+..
T Consensus       213 ~~~~~-~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         213 LDQVE-RGYRM---------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHh-cCCCC---------CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            11111 11000         01112234688999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.51  E-value=9.7e-15  Score=113.05  Aligned_cols=131  Identities=21%  Similarity=0.217  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++........ ......++..|+|||.+.+. .++.++||||+||+ +++++|+.||......   .....
T Consensus       141 ~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~  216 (372)
T cd07853         141 VLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI---QQLDL  216 (372)
T ss_pred             CEEeccccceeecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH---HHHHH
Confidence            5899999999764322111 12234578889999998764 47888999999987 8999999887432111   11110


Q ss_pred             HHHHHhcCC--------------cc-cccC-cccc--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGE--------------AL-ELMD-PVLK--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~--------------~~-~~~~-~~~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .........              +. .... +...  .........++.+++.+||+.||++|||+.|++.|..-
T Consensus       217 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  291 (372)
T cd07853         217 ITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL  291 (372)
T ss_pred             HHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence            000000000              00 0000 0000  00111123467899999999999999999999998643

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.51  E-value=8.4e-15  Score=108.80  Aligned_cols=116  Identities=26%  Similarity=0.422  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......  .......++..|++||.+.+..++.++|+|++|++ +++++|..|+.....   .....  
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~---~~~~~--  211 (277)
T cd06642         139 DVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP---MRVLF--  211 (277)
T ss_pred             CEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch---hhHHh--
Confidence            47899999987543211  11222457788999999988888899999999987 899999888632111   00000  


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                        ......     .+.+    .......+.+++.+||+.+|.+||++.+|+.|..
T Consensus       212 --~~~~~~-----~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  255 (277)
T cd06642         212 --LIPKNS-----PPTL----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF  255 (277)
T ss_pred             --hhhcCC-----CCCC----CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence              000000     1111    1122346788999999999999999999999754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.51  E-value=3.7e-14  Score=105.77  Aligned_cols=124  Identities=26%  Similarity=0.360  Sum_probs=80.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCC-----Ccc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD-----GHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~-----~~~   75 (181)
                      .++|+|||++......    ......|+..|++||.+.+..++.++|+|++||+ +++++|..|+.......     ...
T Consensus       142 ~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~  217 (284)
T cd06620         142 QIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMG  217 (284)
T ss_pred             cEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhH
Confidence            4789999988643211    1123468889999999888888899999999987 89999999875332210     011


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      +......... ...     +.+.   .......+.+++.+||+.||.+||++.||++++.-+.
T Consensus       218 ~~~~~~~~~~-~~~-----~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         218 ILDLLQQIVQ-EPP-----PRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             HHHHHHHHhh-ccC-----CCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            1111111111 000     0000   0112346788999999999999999999999865543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.51  E-value=1.4e-14  Score=106.58  Aligned_cols=118  Identities=29%  Similarity=0.402  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .++|+|||++........ .......++..|++||.+....++.++|+|++|++ +++++ |..|+...   ....... 
T Consensus       140 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~---~~~~~~~-  214 (260)
T cd05067         140 CCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM---TNPEVIQ-  214 (260)
T ss_pred             CEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC---ChHHHHH-
Confidence            478999999876532111 11122345668999999988888899999999987 88998 77776321   1111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                         ........         ..+.....++.+++.+||..+|++||++.+|+..|++
T Consensus       215 ---~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         215 ---NLERGYRM---------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             ---HHHcCCCC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence               11111000         0111122468899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.51  E-value=2.4e-14  Score=109.68  Aligned_cols=112  Identities=21%  Similarity=0.187  Sum_probs=78.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....     .....|+..|+|||++.+..++.++|+||+||+ +++++|..|+....   ..    ..
T Consensus       169 ~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~---~~----~~  236 (340)
T PTZ00426        169 FIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE---PL----LI  236 (340)
T ss_pred             CEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC---HH----HH
Confidence            5899999999764321     123578999999999988888899999999987 89999999874211   11    11


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ......... . +..        .....+.+++.+||+.||++|+     ++.++++|..
T Consensus       237 ~~~i~~~~~-~-~p~--------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~  286 (340)
T PTZ00426        237 YQKILEGII-Y-FPK--------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW  286 (340)
T ss_pred             HHHHhcCCC-C-CCC--------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence            111111111 1 111        1123577899999999999995     8999999854

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.51  E-value=2.9e-14  Score=108.40  Aligned_cols=113  Identities=22%  Similarity=0.239  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  ........|+..|+|||++.+..++.++|+||+||+ +++++|..|+....   ...+   .
T Consensus       139 ~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~---~~~~---~  210 (323)
T cd05616         139 HIKIADFGMCKENMWD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDEL---F  210 (323)
T ss_pred             cEEEccCCCceecCCC--CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC---HHHH---H
Confidence            5899999998753211  112234578999999999998889999999999987 89999999874221   1111   1


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~  133 (181)
                       ........ ..         +.....++.+++.+||+.||.+|+++     .+++.|
T Consensus       211 -~~i~~~~~-~~---------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         211 -QSIMEHNV-AY---------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             -HHHHhCCC-CC---------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence             11111111 11         11123467889999999999999985     677766

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.51  E-value=2.3e-14  Score=106.52  Aligned_cols=117  Identities=23%  Similarity=0.355  Sum_probs=79.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++........  ......++..|++||.+.+..++.++|+|++|++ +++++|..|+.....   ...   .
T Consensus       139 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~---~~~---~  210 (277)
T cd06640         139 DVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP---MRV---L  210 (277)
T ss_pred             CEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh---HhH---h
Confidence            478999999876532211  1223457788999999988888899999999987 899999887632111   000   0


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ..         ...............+.+++.+||+.+|++||++.+|+.|..-
T Consensus       211 ~-~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  256 (277)
T cd06640         211 F-LI---------PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI  256 (277)
T ss_pred             h-hh---------hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHh
Confidence            0 00         0001111222344568899999999999999999999988554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.51  E-value=6.3e-15  Score=108.96  Aligned_cols=119  Identities=26%  Similarity=0.239  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++|++|||.+....... ........++..|+|||.+.+..++.++||||+|++ +++++ |..|+....   .....  
T Consensus       145 ~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~---~~~~~--  218 (266)
T cd05064         145 VCKISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS---GQDVI--  218 (266)
T ss_pred             cEEECCCcccccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC---HHHHH--
Confidence            57899999865432111 111112234567999999988889999999999987 88765 877763221   11111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        .........         ..+......+.+++.+||+.+|.+||++.+|++.|...
T Consensus       219 --~~~~~~~~~---------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         219 --KAVEDGFRL---------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             --HHHHCCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence              111111110         01112234678899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.51  E-value=1.2e-14  Score=106.99  Aligned_cols=118  Identities=30%  Similarity=0.441  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........ .......++..|++||...+..++.++|+|++|++ +++++ |..|+....   .   ...
T Consensus       140 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~---~~~  212 (260)
T cd05069         140 VCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV---N---REV  212 (260)
T ss_pred             eEEECCCccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC---H---HHH
Confidence            479999999876432111 11112235667999999888888899999999987 89998 666653211   1   111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ..........         ..+......+.+++.+||+.||++||++.+|++.|++
T Consensus       213 -~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         213 -LEQVERGYRM---------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             -HHHHHcCCCC---------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence             1111111000         0111223468889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.51  E-value=3.3e-14  Score=108.89  Aligned_cols=128  Identities=20%  Similarity=0.151  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+ ..++.++||||+||+ +++++|..|+....   .......
T Consensus       156 ~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~  227 (343)
T cd07878         156 ELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND---YIDQLKR  227 (343)
T ss_pred             CEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC---HHHHHHH
Confidence            5799999999864321     223468889999999876 457889999999987 89999988874211   1111100


Q ss_pred             HHHHHhcCC-----------cccccCc--ccccC----CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGE-----------ALELMDP--VLKQS----CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~-----------~~~~~~~--~~~~~----~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .........           ....+..  .....    ........+.+++.+||..||.+|||+.|++.|-.-.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~  302 (343)
T cd07878         228 IMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS  302 (343)
T ss_pred             HHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence            000000000           0000000  00000    0001122467899999999999999999999986543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.51  E-value=5.9e-15  Score=110.03  Aligned_cols=127  Identities=20%  Similarity=0.291  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCc-ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCC--------
Q 041917            2 NPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK--------   71 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~--------   71 (181)
                      .+||+|||++......... .......++..|+|||.+.+..++.++||||+|++ +++++++.+.......        
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~  226 (284)
T cd05079         147 QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT  226 (284)
T ss_pred             CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccc
Confidence            4799999998755322211 11223456677999999888888899999999987 8998876543211000        


Q ss_pred             CCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           72 DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .................         ....+......+.+|+.+||+.+|++||++.+|++.|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         227 HGQMTVTRLVRVLEEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cccccHHHHHHHHHcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            00000000011111110         0011112334688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.51  E-value=2.3e-14  Score=115.04  Aligned_cols=134  Identities=20%  Similarity=0.191  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCC-CCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK-DGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~-~~~~~~~~   79 (181)
                      .+||+|||+++....... .......|+..|++||++.+..++.++||||+||+ +++++|..++...... ....+...
T Consensus       305 ~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~  383 (501)
T PHA03210        305 KIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI  383 (501)
T ss_pred             CEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence            579999999986532211 11223578999999999998889999999999987 8999886543221111 11111111


Q ss_pred             HHHHH-hcCCcc-------cccCcc-c---ccCCcH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLW-CEGEAL-------ELMDPV-L---KQSCVG-----AELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~-~~~~~~-------~~~~~~-~---~~~~~~-----~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..... ......       ..++.. +   ....+.     .....+.+++.+||++||++|||+.|++.|...
T Consensus       384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f  457 (501)
T PHA03210        384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF  457 (501)
T ss_pred             HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence            00000 000000       000000 0   000000     011246677889999999999999999998653

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.51  E-value=1.1e-14  Score=106.89  Aligned_cols=114  Identities=26%  Similarity=0.318  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......++..|++||.+....++.++|+|++|++ +++++|..|+....      .....
T Consensus       148 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~  219 (265)
T cd08217         148 NVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQLA  219 (265)
T ss_pred             CEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHHH
Confidence            579999999886533221  1223467888999999988888889999999987 89999998864221      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                       ........     +    ..+......+.+++.+||+.+|++||++.+|++|
T Consensus       220 -~~~~~~~~-----~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         220 -SKIKEGKF-----R----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             -HHHhcCCC-----C----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence             11111111     1    1112233468899999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.51  E-value=7.9e-15  Score=109.61  Aligned_cols=121  Identities=28%  Similarity=0.354  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||+|++ +++++ |..|+...      .....
T Consensus       157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~------~~~~~  230 (288)
T cd05061         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL------SNEQV  230 (288)
T ss_pred             cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            578999999875432211111112234667999999988888999999999987 88887 45554211      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .. ..........         +......+.+++.+||+.||++||++.++++.|++..
T Consensus       231 ~~-~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         231 LK-FVMDGGYLDQ---------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HH-HHHcCCCCCC---------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            11 1111111111         0111246889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.51  E-value=4.5e-14  Score=105.16  Aligned_cols=120  Identities=19%  Similarity=0.279  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||++.......  .......++..|++||.+.     ...++.++|+|++||+ +++++|..|+....      
T Consensus       141 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------  212 (282)
T cd06643         141 DIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN------  212 (282)
T ss_pred             CEEEccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC------
Confidence            57999999987543211  1122346788999999874     3446788999999987 89999988763211      


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ........ ..........+       ......+.+++.+||+.||.+||++.+|+.|....
T Consensus       213 ~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  266 (282)
T cd06643         213 PMRVLLKI-AKSEPPTLAQP-------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT  266 (282)
T ss_pred             HHHHHHHH-hhcCCCCCCCc-------cccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEe
Confidence            11111111 11111111111       11224688999999999999999999999887643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.51  E-value=1.1e-14  Score=106.93  Aligned_cols=115  Identities=31%  Similarity=0.330  Sum_probs=76.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......     ....+..|++||.+....++.++|+||+|++ +++++ |..|+...      .....
T Consensus       140 ~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~  208 (256)
T cd05039         140 VAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDV  208 (256)
T ss_pred             CEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC------CHHHH
Confidence            479999999876522111     1234567999999888888889999999987 88886 77765321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ...........         .+......+.+++.+||..+|++||++.+|+..|+++
T Consensus       209 -~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         209 -VPHVEKGYRME---------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             -HHHHhcCCCCC---------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence             11111110000         1111234688899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.51  E-value=6.3e-14  Score=106.76  Aligned_cols=119  Identities=19%  Similarity=0.239  Sum_probs=76.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc------cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM------EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~------~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~   74 (181)
                      ++||+|||++......... ......|+..|+|||++.      ...++.++||||+|++ +++++|..||....   . 
T Consensus       140 ~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~---~-  214 (330)
T cd05601         140 HIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT---S-  214 (330)
T ss_pred             CEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC---H-
Confidence            5899999999865332221 122346889999999986      3457788999999987 89999999874211   1 


Q ss_pred             chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           75 SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                        ...................       ......+.+++..||. +|++||++.+++.|-.
T Consensus       215 --~~~~~~i~~~~~~~~~~~~-------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~  265 (330)
T cd05601         215 --AKTYNNIMNFQRFLKFPED-------PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF  265 (330)
T ss_pred             --HHHHHHHHcCCCccCCCCC-------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence              1111111111111111110       1122357788899997 9999999999998854

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.50  E-value=3.6e-14  Score=107.93  Aligned_cols=114  Identities=23%  Similarity=0.222  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......  .....+|+..|+|||++.+..++.++|+||+||+ +++++|+.|+....   ....   .
T Consensus       139 ~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~---~  210 (324)
T cd05587         139 HIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDEL---F  210 (324)
T ss_pred             CEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHH---H
Confidence            579999999874321111  1223578999999999998888999999999987 89999998874221   1111   1


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L  134 (181)
                      . ...... ...         +.....++.+++.+||..||.+|++.     .+++.|.
T Consensus       211 ~-~i~~~~-~~~---------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp  258 (324)
T cd05587         211 Q-SIMEHN-VSY---------PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHA  258 (324)
T ss_pred             H-HHHcCC-CCC---------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence            1 111111 011         11122367889999999999999987     6777764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.50  E-value=5.7e-14  Score=104.68  Aligned_cols=118  Identities=22%  Similarity=0.336  Sum_probs=75.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++.......  .......|+..|+|||.+..     ..++.++|+|++|++ +++++|..|+.....     
T Consensus       162 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-----  234 (286)
T cd06638         162 GVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-----  234 (286)
T ss_pred             CEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-----
Confidence            47899999987653221  11223468889999998753     346788999999987 899999888642211     


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .... .. ...........+       ......+..++.+||+.||++||++.+|++|+.
T Consensus       235 ~~~~-~~-~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~  285 (286)
T cd06638         235 MRAL-FK-IPRNPPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF  285 (286)
T ss_pred             hHHH-hh-ccccCCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence            0000 00 000000011111       111235888999999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.50  E-value=1.6e-14  Score=109.07  Aligned_cols=127  Identities=24%  Similarity=0.329  Sum_probs=79.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++......    ......|+..|++||.+.+..++.++|+|++|++ +++++|..|+.....   .......
T Consensus       138 ~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~---~~~~~~~  210 (308)
T cd06615         138 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA---KELEAMF  210 (308)
T ss_pred             cEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch---hhHHHhh
Confidence            4789999988654211    1223567889999999888778899999999987 899999988642211   0110000


Q ss_pred             HHHHhcCCc---------------------------ccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEA---------------------------LELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .........                           ..-..+.+..   .....++.+++.+||..+|++||++.+|+.|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         211 GRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             cCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000000000                           0000000000   0123358899999999999999999999999


Q ss_pred             hhcCC
Q 041917          134 LASDT  138 (181)
Q Consensus       134 L~~~~  138 (181)
                      ..-..
T Consensus       288 ~~~~~  292 (308)
T cd06615         288 PFIKR  292 (308)
T ss_pred             hhhhh
Confidence            76543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.50  E-value=4.1e-14  Score=106.25  Aligned_cols=119  Identities=22%  Similarity=0.299  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.........  .....++..|++||.+.+..++.++|+|++|++ +++++|..||.....      ....
T Consensus       154 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~------~~~~  225 (296)
T cd06654         154 SVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRAL  225 (296)
T ss_pred             CEEECccccchhccccccc--cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH------HHhH
Confidence            5799999988754321111  122467888999999988888899999999987 899999998742211      0000


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ....... ...     +  ..+......+.+++.+||..+|+.||++.+|+.+-..
T Consensus       226 ~~~~~~~-~~~-----~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~  273 (296)
T cd06654         226 YLIATNG-TPE-----L--QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL  273 (296)
T ss_pred             HHHhcCC-CCC-----C--CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhh
Confidence            0111000 000     0  0011122357889999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.50  E-value=3e-14  Score=112.54  Aligned_cols=112  Identities=17%  Similarity=0.098  Sum_probs=82.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +++|+|||.++.....     ....+-+..|.|||+.....|+..+|+||+|++ ++|++|+.|+......      ...
T Consensus       454 ~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei  522 (612)
T KOG0603|consen  454 HLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEI  522 (612)
T ss_pred             cEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHH
Confidence            5899999999865432     223466788999999999999999999999987 8999999997543222      111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......+            .....-+....+|+.+||+.||.+|+++.++..|-+.
T Consensus       523 ~~~i~~~------------~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  523 HTRIQMP------------KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHhhcCC------------ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            1111111            1112334468899999999999999999999999776

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.50  E-value=1.5e-14  Score=106.80  Aligned_cols=116  Identities=24%  Similarity=0.334  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCC----cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQN----EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~----~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      .+||+|||+++.......    ........|+..|++||.+.+..++.++|+|++|++ +++++|..|+....      .
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~  217 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT------Q  217 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc------H
Confidence            579999999876532111    111123457888999999988888889999999987 89999998874211      0


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ...... ...     ...+.+    +......+.+++.+||+.||.+||++.+|++|
T Consensus       218 ~~~~~~-~~~-----~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         218 LQAIFK-IGE-----NASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHHHHH-Hhc-----cCCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            111111 001     111111    11223467889999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.50  E-value=1.1e-14  Score=106.87  Aligned_cols=114  Identities=24%  Similarity=0.317  Sum_probs=76.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++........  ......|+..|+|||++.+..++.++|+|++|++ +++++|..|+...      ......
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~------~~~~~~  209 (255)
T cd08219         138 KVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN------SWKNLI  209 (255)
T ss_pred             cEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC------CHHHHH
Confidence            478999999876532211  1223467888999999988888899999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .. ........ +        +......+.+++.+||+.||++||++.+|+..
T Consensus       210 ~~-~~~~~~~~-~--------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         210 LK-VCQGSYKP-L--------PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HH-HhcCCCCC-C--------CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            11 11111111 1        11122357889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.50  E-value=3e-14  Score=105.48  Aligned_cols=122  Identities=22%  Similarity=0.293  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++...............|+..|++||.+....  ++.++|+|++|++ +++++|..|+...     ... .
T Consensus       146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~-----~~~-~  219 (272)
T cd06629         146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE-----EAI-A  219 (272)
T ss_pred             eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc-----chH-H
Confidence            47899999987543222222223346788899999987644  7788999999987 8999998886311     111 1


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ....... ......+..    .........+.+++.+||..+|..||++.+|+.|.
T Consensus       220 ~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  270 (272)
T cd06629         220 AMFKLGN-KRSAPPIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQHP  270 (272)
T ss_pred             HHHHhhc-cccCCcCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence            1111111 111111111    11112234688899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.50  E-value=7e-14  Score=105.11  Aligned_cols=124  Identities=17%  Similarity=0.175  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......|+..|++||.+.+..++.++|+|++|++ +++++|..|+....      .....
T Consensus       155 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~~~~~  226 (297)
T cd06659         155 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS------PVQAM  226 (297)
T ss_pred             cEEEeechhHhhcccccc--cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            579999999865432211  1223568889999999988888899999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      . ....... ....      ........+.+++.+||+.+|++||++.+|++|-.-....+
T Consensus       227 ~-~~~~~~~-~~~~------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         227 K-RLRDSPP-PKLK------NAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             H-HHhccCC-CCcc------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence            1 1111100 0000      00111235778999999999999999999999865554443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.50  E-value=1.4e-13  Score=104.45  Aligned_cols=114  Identities=18%  Similarity=0.203  Sum_probs=75.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  .......+|+..|+|||.+.+..++.++|+||+||+ +++++|..|+...      ......
T Consensus       134 ~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~  205 (321)
T cd05603         134 HVVLTDFGLCKEGVEP--EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR------DVSQMY  205 (321)
T ss_pred             CEEEccCCCCccCCCC--CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC------CHHHHH
Confidence            5799999998743211  112234578999999999988889999999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHH----HHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMS----SVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~----evl~~L  134 (181)
                       ....... ..         .+......+.+++.+||+.||.+|+++.    ++++|.
T Consensus       206 -~~i~~~~-~~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~  252 (321)
T cd05603         206 -DNILHKP-LQ---------LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHV  252 (321)
T ss_pred             -HHHhcCC-CC---------CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence             1111111 01         1111234678899999999999999764    666554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.50  E-value=1.7e-14  Score=105.73  Aligned_cols=113  Identities=27%  Similarity=0.414  Sum_probs=76.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........   .....++..|++||.+.+..++.++|+|++|++ +++++|..++...      ......
T Consensus       140 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~------~~~~~~  210 (256)
T cd08220         140 VVKIGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA------NLPALV  210 (256)
T ss_pred             EEEEccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC------chHHHH
Confidence            368999999876532221   122467888999999988778889999999987 8999998886321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ..... .......         ......+..++.+||+.+|.+|||+.||+.|
T Consensus       211 ~~~~~-~~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         211 LKIMS-GTFAPIS---------DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHh-cCCCCCC---------CCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            11111 1111111         1123357889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.50  E-value=2.3e-14  Score=106.75  Aligned_cols=119  Identities=20%  Similarity=0.210  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......|+..|+|||.+.+..++.++|+||+|++ +++++|+.|+.......  .... .
T Consensus       135 ~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~-~  209 (280)
T cd05608         135 NVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKE-L  209 (280)
T ss_pred             CEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch--hHHH-H
Confidence            478999999876532211  1223568889999999998889999999999987 89999999874321110  0000 0


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ........ .         ..+......+.+++.+||+.||++||     ++.+++.|-.
T Consensus       210 ~~~~~~~~-~---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~  259 (280)
T cd05608         210 KQRILNDS-V---------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPL  259 (280)
T ss_pred             HHhhcccC-C---------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChh
Confidence            11100000 0         11112234678899999999999999     7889998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.50  E-value=1.4e-14  Score=107.11  Aligned_cols=120  Identities=23%  Similarity=0.325  Sum_probs=75.8

Q ss_pred             CceeeceecceeecCCCCcccccccc---cCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVV---GTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~---g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~   76 (181)
                      .+||+|||++................   .+..|++||.+....++.++|||++|++ +++++ |..|+...   .....
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~---~~~~~  220 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM---SNQDV  220 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC---CHHHH
Confidence            57899999987543222111111111   1346999999988888999999999987 88776 77775321   11111


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ..    .....  .....       +......+.+++..||+.+|.+||++.+|+..|++.
T Consensus       221 ~~----~i~~~--~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         221 IN----AIEQD--YRLPP-------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HH----HHHcC--CcCCC-------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11    11111  00000       111223577899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.50  E-value=1.9e-14  Score=105.52  Aligned_cols=115  Identities=28%  Similarity=0.429  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......++..|.+||.+.+..++.++|+|++|++ +++++|..++...      ......
T Consensus       139 ~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~  210 (256)
T cd08221         139 LIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT------NPLNLV  210 (256)
T ss_pred             CEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC------CHHHHH
Confidence            579999999876543221  2233567889999999988778889999999987 8999998886321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .... .......         ......++.+++.+||+.+|.+||++.++++++
T Consensus       211 ~~~~-~~~~~~~---------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         211 VKIV-QGNYTPV---------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHH-cCCCCCC---------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            1111 1111110         112234678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.49  E-value=7.4e-14  Score=113.59  Aligned_cols=119  Identities=18%  Similarity=0.129  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCC-Ccccc----c--ccccCCCccCcccc---ccCccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQ-NEANT----N--RVVGTYGYMAPEYA---MEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-~~~~~----~--~~~g~~~~~aPe~~---~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      +.||||||.+....... .....    .  ...-|+.|++||.+   .+...+.|+|||++||+ |.++....||...  
T Consensus       184 ~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s--  261 (738)
T KOG1989|consen  184 NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES--  261 (738)
T ss_pred             CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC--
Confidence            46999999886432111 10000    0  11347889999987   36668899999999998 8889999997321  


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                                       ....+++-...-.-.......+..||..||+.+|.+||++-||+.++..+..
T Consensus       262 -----------------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  262 -----------------GKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             -----------------cceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence                             1122333322222224556679999999999999999999999999876654

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.49  E-value=3.2e-14  Score=104.78  Aligned_cols=118  Identities=28%  Similarity=0.403  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|++||.+....++.++|+|++|++ +++++ |..|+...   ....... 
T Consensus       140 ~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~---~~~~~~~-  214 (260)
T cd05073         140 VCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM---SNPEVIR-  214 (260)
T ss_pred             cEEECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC---CHHHHHH-
Confidence            5799999998754322111 1112234567999999988888889999999987 88998 77765321   1111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                         ..........         ......++.+++.+||+.+|++||++.+|+..|++
T Consensus       215 ---~~~~~~~~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         215 ---ALERGYRMPR---------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             ---HHhCCCCCCC---------cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence               1111111010         11122468899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.49  E-value=3.8e-14  Score=107.70  Aligned_cols=114  Identities=17%  Similarity=0.165  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......  ......+|+..|+|||.+.+..++.++||||+||+ +++++|..|+...      ......
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~------~~~~~~  205 (323)
T cd05575         134 HVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------DTAEMY  205 (323)
T ss_pred             cEEEeccCCCcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC------CHHHHH
Confidence            57999999987432111  12234578999999999988889999999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH----HHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM----SSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~----~evl~~L  134 (181)
                      .. ...... . +.+        .....+.+++.+||+.||++||++    .+++.|.
T Consensus       206 ~~-i~~~~~-~-~~~--------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~  252 (323)
T cd05575         206 DN-ILNKPL-R-LKP--------NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHV  252 (323)
T ss_pred             HH-HHcCCC-C-CCC--------CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence            11 111110 1 111        113467889999999999999998    4777654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.49  E-value=2.8e-14  Score=105.08  Aligned_cols=121  Identities=25%  Similarity=0.431  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcc--cccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++..........  ......|+..|++||.+... .++.++|+|++|++ +++++|..|+......  ... 
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~-  216 (267)
T cd06610         140 SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVL-  216 (267)
T ss_pred             CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhH-
Confidence            47899999987654322221  12234678889999998766 67889999999987 8999999887422110  001 


Q ss_pred             HHHHHHHhcCCcccccCcccccCC-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSC-VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                         ...... .     .+.+.... .......+.+++.+||..||++||++.+|+.|-
T Consensus       217 ---~~~~~~-~-----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p  265 (267)
T cd06610         217 ---MLTLQN-D-----PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHK  265 (267)
T ss_pred             ---HHHhcC-C-----CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCC
Confidence               111111 0     01111000 112234678999999999999999999999873

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.49  E-value=4.1e-14  Score=119.15  Aligned_cols=112  Identities=22%  Similarity=0.280  Sum_probs=75.4

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +||+|||++.......   ......|++.|+|||++.+  ..++.++|||||||+ +++++|..||...     ......
T Consensus       181 VKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~-----~~~~ql  252 (1021)
T PTZ00266        181 AKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA-----NNFSQL  252 (1021)
T ss_pred             eEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC-----CcHHHH
Confidence            7999999997643211   1233478999999999864  347889999999987 8999999987421     111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ... .....  .+...        .....+.+|+..||..+|.+||++.|++.+
T Consensus       253 i~~-lk~~p--~lpi~--------~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        253 ISE-LKRGP--DLPIK--------GKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             HHH-HhcCC--CCCcC--------CCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            111 11110  00000        112468889999999999999999999965

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=6.2e-14  Score=103.63  Aligned_cols=115  Identities=20%  Similarity=0.230  Sum_probs=82.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.-.  .......++|||+.|+|||++....|+..+|.|.+||+ ++|+.|+.||..   +++..+.+.+
T Consensus       306 HIKitDFGLCKE~I--~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn---~dh~kLFeLI  380 (516)
T KOG0690|consen  306 HIKITDFGLCKEEI--KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN---KDHEKLFELI  380 (516)
T ss_pred             ceEeeecccchhcc--cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc---cchhHHHHHH
Confidence            78999999998532  23344567899999999999999999999999999987 999999999843   2222222222


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ..    .++          .++.....+...++...|.+||++|.     .+.||..|-.
T Consensus       381 l~----ed~----------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~F  426 (516)
T KOG0690|consen  381 LM----EDL----------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRF  426 (516)
T ss_pred             Hh----hhc----------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhh
Confidence            11    111          11222234677788899999999997     4778887743

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.49  E-value=7.1e-14  Score=105.01  Aligned_cols=118  Identities=22%  Similarity=0.289  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......++..|++||.+.+..++.++|+|++||+ +++++|..|+.....      ....
T Consensus       153 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~------~~~~  224 (296)
T cd06655         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP------LRAL  224 (296)
T ss_pred             CEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH
Confidence            578999998875432211  1123457788999999988888899999999987 899999988733211      0100


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...........       +......+.+++.+||..||++||++.+|+.|-.
T Consensus       225 ~~-~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~  271 (296)
T cd06655         225 YL-IATNGTPELQN-------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF  271 (296)
T ss_pred             HH-HHhcCCcccCC-------cccCCHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence            01 11010000000       1112235778999999999999999999998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.49  E-value=2.2e-14  Score=106.76  Aligned_cols=129  Identities=21%  Similarity=0.186  Sum_probs=75.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......  ......++..|+|||.+.+.. ++.++||||+|++ +++++|..|+.....  .......
T Consensus       137 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~--~~~~~~~  212 (284)
T cd07839         137 ELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKR  212 (284)
T ss_pred             cEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC--HHHHHHH
Confidence            579999999875432111  112235678899999886644 6788999999987 899999888532111  1111110


Q ss_pred             HHHHHhcCC------cccccC----ccccc-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGE------ALELMD----PVLKQ-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~------~~~~~~----~~~~~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .........      .....+    +....     ........++.+++.+||+.||.+|||+.+++.|.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~  282 (284)
T cd07839         213 IFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP  282 (284)
T ss_pred             HHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence            000000000      000000    00000     00111234678899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.49  E-value=1.7e-14  Score=105.42  Aligned_cols=117  Identities=26%  Similarity=0.269  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|++||.+....++.++|+|++|++ +++++ |..|+...      .....
T Consensus       131 ~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~------~~~~~  203 (250)
T cd05085         131 VLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM------TNQQA  203 (250)
T ss_pred             eEEECCCccceeccccccc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC------CHHHH
Confidence            4789999998753221111 1111233567999999988888889999999987 88887 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      . ..........         .+......+.+++.+||+.+|++||++.+|++.|.
T Consensus       204 ~-~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         204 R-EQVEKGYRMS---------CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             H-HHHHcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            1 1111111001         11112346888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.49  E-value=9.3e-14  Score=103.99  Aligned_cols=118  Identities=19%  Similarity=0.267  Sum_probs=75.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||++......  ........++..|++||.+.     ...++.++|+|++|++ |++++|..|+....      
T Consensus       148 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------  219 (292)
T cd06644         148 DIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------  219 (292)
T ss_pred             CEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc------
Confidence            4799999988653221  11122346788899999884     3446778999999987 89999988763211      


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ....... ..........       .+.....++.+++.+||..+|++||++.+|++|..
T Consensus       220 ~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  271 (292)
T cd06644         220 PMRVLLK-IAKSEPPTLS-------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF  271 (292)
T ss_pred             HHHHHHH-HhcCCCccCC-------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            1111111 1111110110       11122335788999999999999999999998754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.49  E-value=1.5e-14  Score=107.77  Aligned_cols=128  Identities=20%  Similarity=0.260  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|++||.+... .++.++|+|++|++ +++++|..++.....   ......
T Consensus       138 ~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~---~~~~~~  213 (288)
T cd07833         138 VLKLCDFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD---IDQLYL  213 (288)
T ss_pred             CEEEEeeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            5799999998765432221 12234677889999999877 78889999999987 899999877642211   000000


Q ss_pred             HHHHHhc-----------CC---cccccCcc----cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           80 TWKLWCE-----------GE---ALELMDPV----LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        80 ~~~~~~~-----------~~---~~~~~~~~----~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .......           ..   .....+..    .....+.....++.+++.+||..+|++||++.+|+.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         214 IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             HHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0000000           00   00000000    0001111224568899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.49  E-value=2.7e-14  Score=106.64  Aligned_cols=117  Identities=23%  Similarity=0.247  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........   .....|+..|++||.+.+..++.++|+|++|++ +++++|..|+....   ........
T Consensus       140 ~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~---~~~~~~~~  213 (285)
T cd05632         140 HIRISDLGLAVKIPEGES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK---EKVKREEV  213 (285)
T ss_pred             CEEEecCCcceecCCCCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH
Confidence            579999999875432111   123468899999999988888999999999987 89999998874221   11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L  134 (181)
                      ........      ...    .......+.+|+..||+.||++||+     +.+++.|-
T Consensus       214 ~~~~~~~~------~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~  262 (285)
T cd05632         214 DRRVLETE------EVY----SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHP  262 (285)
T ss_pred             HHhhhccc------ccc----CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcCh
Confidence            11111100      001    1112235788999999999999999     77888773

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.49  E-value=5.1e-14  Score=107.11  Aligned_cols=109  Identities=17%  Similarity=0.188  Sum_probs=73.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......  .......|+..|+|||++.+..++.++||||+||+ +++++|..|+....      .....
T Consensus       134 ~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~  205 (325)
T cd05602         134 HIVLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMY  205 (325)
T ss_pred             CEEEccCCCCcccccCC--CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC------HHHHH
Confidence            57999999987532211  12234578999999999998889999999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                      .... .... . +.+        .....+.+++.+||+.||.+|+++.+
T Consensus       206 ~~i~-~~~~-~-~~~--------~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         206 DNIL-NKPL-Q-LKP--------NITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             HHHH-hCCc-C-CCC--------CCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            1111 1110 0 111        11235788999999999999999873

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.49  E-value=8.8e-14  Score=101.60  Aligned_cols=126  Identities=17%  Similarity=0.127  Sum_probs=85.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++....   .....+.|-|+.|.|||++...+|+...|+||+||+ +-++.|..||.....   ..+..-.
T Consensus       202 ~lKLtDfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg---~aispgM  275 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---LAISPGM  275 (400)
T ss_pred             ceEecccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC---ccCChhH
Confidence            479999999986432   233345688999999999998889999999999988 677888888743222   1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ...+..+ ...++++     ...+-+....++++..|+.+|++|.|+.+++.|-+-...
T Consensus       276 k~rI~~g-qy~FP~p-----EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  276 KRRIRTG-QYEFPEP-----EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             HhHhhcc-CccCCCh-----hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence            1111111 1122222     223345567889999999999999999999999775433

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.48  E-value=8.8e-14  Score=102.35  Aligned_cols=110  Identities=20%  Similarity=0.224  Sum_probs=71.6

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +|++|||++.....      .....++..|++||++.+. .++.++|+||+|++ +++++|..++...     .......
T Consensus       147 ~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~-----~~~~~~~  215 (258)
T cd05078         147 IKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA-----LDSQKKL  215 (258)
T ss_pred             EEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh-----ccHHHHH
Confidence            58899998764321      1124577889999998764 47888999999987 8999985443111     0111110


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ...  .. ...         .+.....++.+++.+||+.||++|||+.+|++.|+
T Consensus       216 ~~~--~~-~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         216 QFY--ED-RHQ---------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHH--Hc-ccc---------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            000  00 001         11112246889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.48  E-value=5.6e-14  Score=108.04  Aligned_cols=128  Identities=21%  Similarity=0.115  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......++..|++||.+.+..++.++||||+|++ +++++|+.|+.....   .......
T Consensus       156 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~---~~~~~~~  229 (353)
T cd07850         156 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH---IDQWNKI  229 (353)
T ss_pred             CEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH---HHHHHHH
Confidence            57999999997643211   1223457788999999988889999999999987 899999988743211   0000000


Q ss_pred             H-------------------HHHhcCC------cccccCcc----cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 041917           81 W-------------------KLWCEGE------ALELMDPV----LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVV  131 (181)
Q Consensus        81 ~-------------------~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl  131 (181)
                      .                   .......      ........    ............+.+++.+||+.||++|||+.|++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL  309 (353)
T cd07850         230 IEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL  309 (353)
T ss_pred             HHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence            0                   0000000      00000000    00000112244578999999999999999999999


Q ss_pred             HHhh
Q 041917          132 VMLA  135 (181)
Q Consensus       132 ~~L~  135 (181)
                      .|-.
T Consensus       310 ~~~~  313 (353)
T cd07850         310 QHPY  313 (353)
T ss_pred             cChh
Confidence            8854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.48  E-value=1.8e-13  Score=101.26  Aligned_cols=122  Identities=16%  Similarity=0.249  Sum_probs=72.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-------CccCcccceeehhHH-HHHHhcCC-CCCCCcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-------GVFSIKSDVFSFGVL-LEIVSGKR-NSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-------~~~~~~~diws~gv~-~~~~~g~~-~~~~~~~~~   72 (181)
                      ++||+|||++................++..|++||++..       ..++.++||||+|++ ++++++.. |+...   .
T Consensus       137 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~---~  213 (268)
T cd05086         137 TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL---S  213 (268)
T ss_pred             cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC---C
Confidence            579999998764221111111223467788999998743       234678999999987 88887544 43211   1


Q ss_pred             CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           73 GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .   ......... .......++.+...+    ...+.+++..|| .+|++||++.+|++.|.
T Consensus       214 ~---~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         214 D---REVLNHVIK-DQQVKLFKPQLELPY----SERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             H---HHHHHHHHh-hcccccCCCccCCCC----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            1   111111111 111223333332222    235677888999 57999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.48  E-value=2.7e-14  Score=108.33  Aligned_cols=114  Identities=21%  Similarity=0.200  Sum_probs=75.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  ........|+..|++||.+.+..++.++|+|++|++ +++++|+.|+....      .....
T Consensus       136 ~~kL~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~------~~~~~  207 (318)
T cd05582         136 HIKLTDFGLSKESIDH--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD------RKETM  207 (318)
T ss_pred             cEEEeeccCCcccCCC--CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC------HHHHH
Confidence            5799999998754321  112234578999999999988888899999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L  134 (181)
                      .. ..... ..+         +......+.+++.+||+.||++||+     +.+++.|.
T Consensus       208 ~~-i~~~~-~~~---------p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~  255 (318)
T cd05582         208 TM-ILKAK-LGM---------PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHP  255 (318)
T ss_pred             HH-HHcCC-CCC---------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCC
Confidence            11 11111 011         1112235788999999999999999     55566553

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.48  E-value=1.1e-13  Score=103.77  Aligned_cols=120  Identities=19%  Similarity=0.234  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......|+..|+|||...+..++.++|+||+|++ +++++|..|+....   ....   .
T Consensus       156 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~---~~~~---~  227 (292)
T cd06658         156 RIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP---PLQA---M  227 (292)
T ss_pred             CEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHH---H
Confidence            579999999875432211  1223467889999999988888899999999987 89999998864211   1111   1


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ...     .+.+.....  ......+..++.+||..||++|||+.+|++|-...
T Consensus       228 ~~-~~~-----~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~  276 (292)
T cd06658         228 RR-IRD-----NLPPRVKDS--HKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLK  276 (292)
T ss_pred             HH-HHh-----cCCCccccc--cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhh
Confidence            11 100     011111110  01123577889999999999999999999985544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.48  E-value=2.8e-14  Score=105.47  Aligned_cols=117  Identities=25%  Similarity=0.341  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||++........  ......|+..|++||.+....  ++.++|+||+|++ +++++|..|+.....   .....
T Consensus       147 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~---~~~~~  221 (268)
T cd06624         147 VVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE---PQAAM  221 (268)
T ss_pred             eEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC---hhhhH
Confidence            478999999875432211  112235788899999986543  6788999999987 899999888632111   00000


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      +. ....  .    ..+    ..+.....++.+++.+||+.+|++|||+.+|+.|-
T Consensus       222 ~~-~~~~--~----~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  266 (268)
T cd06624         222 FK-VGMF--K----IHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP  266 (268)
T ss_pred             hh-hhhh--c----cCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence            00 0000  0    001    11122334688899999999999999999999874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.48  E-value=2.8e-14  Score=105.33  Aligned_cols=118  Identities=20%  Similarity=0.330  Sum_probs=74.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++......  ........|+..|+|||.+.   ...++.++|+||+||+ +++++|..|+.....  .... 
T Consensus       144 ~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~--~~~~-  218 (267)
T cd06645         144 HVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP--MRAL-  218 (267)
T ss_pred             CEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc--hhhH-
Confidence            4789999998754321  11123356888999999874   3457789999999987 899999887632111  0000 


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                         ... ......   .+.....  ......+.+++.+||+.+|++||++.+|++|
T Consensus       219 ---~~~-~~~~~~---~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         219 ---FLM-TKSNFQ---PPKLKDK--MKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             ---Hhh-hccCCC---CCccccc--CCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence               000 000000   0111000  0112357789999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.48  E-value=1.6e-13  Score=102.10  Aligned_cols=126  Identities=21%  Similarity=0.185  Sum_probs=76.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........   .....++..|++||.+.+..++.++|+|++|++ +++++|..++....   ........
T Consensus       145 ~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~---~~~~~~~~  218 (287)
T cd07838         145 QVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS---EADQLDKI  218 (287)
T ss_pred             CEEEeccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC---hHHHHHHH
Confidence            579999999876532211   122346778999999988888899999999987 89999876653211   11111101


Q ss_pred             HHHHhcCCccccc----------Ccccc---cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELM----------DPVLK---QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .............          .....   ..........+.+++.+||+.||++||++.+++.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         219 FDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             HHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence            0100000000000          00000   00111223467889999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.48  E-value=4.3e-14  Score=104.46  Aligned_cols=134  Identities=20%  Similarity=0.144  Sum_probs=84.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+|+.....  ....+..+-|.+|.|||.+.+.. |+..+|+||+||+ .+++.++..|+....   .+....
T Consensus       215 ~lKiaDFGLAR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE---~dQl~~  289 (419)
T KOG0663|consen  215 ILKIADFGLAREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE---IDQLDK  289 (419)
T ss_pred             cEEecccchhhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch---HHHHHH
Confidence            4799999999976432  22233456688999999998755 8999999999998 688888776643222   122222


Q ss_pred             HHHHHhcCC--ccccc---------------CcccccCCcHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGE--ALELM---------------DPVLKQSCVGA-ELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~--~~~~~---------------~~~~~~~~~~~-~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      +.....-..  +..-+               ...++..+... -...-.+|+...+..||++|.|+.|.++|=......
T Consensus       290 If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  290 IFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             HHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence            211111110  00000               00111111111 224567899999999999999999999987665433

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.48  E-value=4.2e-14  Score=100.67  Aligned_cols=122  Identities=16%  Similarity=0.159  Sum_probs=78.7

Q ss_pred             CceeeceecceeecC----CCC---cccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGG----NQN---EANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~----~~~---~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      .++|.|||.+....-    ..+   .+.......|..|.|||.+..   ...+.++||||+||. +.++.|..||.....
T Consensus       167 ~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~  246 (302)
T KOG2345|consen  167 LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ  246 (302)
T ss_pred             ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh
Confidence            568999998765421    111   111122345778999998863   446689999999987 899999999743221


Q ss_pred             CCCcchHHHHHHHHhcCCccccc-CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           71 KDGHSLLTYTWKLWCEGEALELM-DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .              ++.+.-.+ ...+.-.........+..++..|++.||.+||++.+++.+++..
T Consensus       247 ~--------------GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  247 Q--------------GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             c--------------CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            1              11111111 11111111112445788999999999999999999999999875

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.48  E-value=4.5e-14  Score=109.68  Aligned_cols=98  Identities=18%  Similarity=0.141  Sum_probs=69.2

Q ss_pred             ccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcH
Q 041917           25 RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVG  103 (181)
Q Consensus        25 ~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (181)
                      +.+||+-|+|||++.+..|+..+|.||+||| +|++.|..||.......      -.............++.       .
T Consensus       347 StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~------T~rkI~nwr~~l~fP~~-------~  413 (550)
T KOG0605|consen  347 STVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQE------TYRKIVNWRETLKFPEE-------V  413 (550)
T ss_pred             cccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhhhccCCCc-------C
Confidence            3689999999999999999999999999988 89999999985432211      11111111111222211       1


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCC---HHHHHHHhhc
Q 041917          104 AELLKYIHIGLLCVQEDPARRPS---MSSVVVMLAS  136 (181)
Q Consensus       104 ~~~~~~~~l~~~cl~~dp~~Rpt---~~evl~~L~~  136 (181)
                      ....+..+|+.+|+. ||++|..   +.||.+|...
T Consensus       414 ~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF  448 (550)
T KOG0605|consen  414 DLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFF  448 (550)
T ss_pred             cccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcc
Confidence            112578899999998 9999985   8899988643

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.48  E-value=2.4e-14  Score=104.98  Aligned_cols=114  Identities=30%  Similarity=0.371  Sum_probs=75.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.......     .....+..|++||.+.+..++.+.|+|++|++ +++++ |..|+...      .....
T Consensus       138 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~  206 (254)
T cd05083         138 VAKVSDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM------SLKEV  206 (254)
T ss_pred             cEEECCCccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC------CHHHH
Confidence            57999999987532111     11234567999999888888899999999987 88887 77775321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ........   +++      +......+.+++.+||+.+|+.||++.+|+..|+.
T Consensus       207 ~-~~~~~~~~---~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         207 K-ECVEKGYR---MEP------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             H-HHHhCCCC---CCC------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            1 11111110   110      11122467889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.48  E-value=9.4e-14  Score=102.55  Aligned_cols=109  Identities=25%  Similarity=0.356  Sum_probs=70.5

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccc-cCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      +|++|||++.....      .....++..|+|||.+. +..++.++|||++|++ ++++. |..|+...      .....
T Consensus       151 ~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~------~~~~~  218 (262)
T cd05077         151 IKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK------TLAEK  218 (262)
T ss_pred             eEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc------chhHH
Confidence            68999998864321      11235677899999886 4567889999999987 78874 55554211      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      . . ..... .....+         ...++.+|+.+||+.||.+||++.+|+.+|.
T Consensus       219 ~-~-~~~~~-~~~~~~---------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         219 E-R-FYEGQ-CMLVTP---------SCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             H-H-HHhcC-ccCCCC---------ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            0 1 11111 111111         1235788999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.48  E-value=8.4e-14  Score=102.68  Aligned_cols=118  Identities=25%  Similarity=0.285  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCC----cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQN----EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~----~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      .+||+|||++........    ........|+..|++||.+.+..++.++|+|++|++ +++++|..|+....     ..
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~  214 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD-----RL  214 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC-----hH
Confidence            478999999875421110    111123467888999999988888899999999987 89999998874211     01


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                       .............    +.+..    ....++.+++.+||+.+|.+||++.+|+.|
T Consensus       215 -~~~~~~~~~~~~~----~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         215 -AAMFYIGAHRGLM----PRLPD----SFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             -HHHHHhhhccCCC----CCCCC----CCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             0000101110011    11111    123457889999999999999999999876

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.47  E-value=3.3e-14  Score=107.21  Aligned_cols=115  Identities=25%  Similarity=0.341  Sum_probs=76.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++......      ....++..|++||++.   ...++.++|||++|++ |++++|..|+...      ...
T Consensus       153 ~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~------~~~  220 (307)
T cd06607         153 TVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAM  220 (307)
T ss_pred             CEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCc------cHH
Confidence            5799999998754221      1235777899999874   3457789999999987 8999998886321      111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...... .......     +.   .......+.+++.+||+.+|++||++.+|+.|..-.
T Consensus       221 ~~~~~~-~~~~~~~-----~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  271 (307)
T cd06607         221 SALYHI-AQNDSPT-----LS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL  271 (307)
T ss_pred             HHHHHH-hcCCCCC-----CC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence            111111 1111111     10   112334688999999999999999999999986544

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=1.2e-13  Score=101.44  Aligned_cols=118  Identities=19%  Similarity=0.286  Sum_probs=76.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC---ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG---VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~---~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++.......  .......++..|++||.+...   .++.++|+|++|++ +++++|..|+.....      .
T Consensus       139 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~------~  210 (262)
T cd06613         139 DVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP------M  210 (262)
T ss_pred             CEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH------H
Confidence            47899999987543211  112234677889999998766   78889999999987 899999988642111      0


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ..... ......   ....+  ........++.+++.+||..+|..|||+.+|+.|
T Consensus       211 ~~~~~-~~~~~~---~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         211 RALFL-ISKSNF---PPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHH-HHhccC---CCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            10011 111100   00001  1112234568899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.47  E-value=1.3e-13  Score=103.07  Aligned_cols=117  Identities=22%  Similarity=0.296  Sum_probs=74.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-----ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-----VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-----~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++........  ......|+..|++||.+...     .++.++|+||+|++ +++++|+.|+....     .
T Consensus       166 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~-----~  238 (291)
T cd06639         166 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH-----P  238 (291)
T ss_pred             CEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc-----H
Confidence            479999999875432111  11234678889999987543     25788999999987 89999988863211     0


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      . ...... ..........       +......+.+++.+||+.+|++||++.+++.|-
T Consensus       239 ~-~~~~~~-~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~  288 (291)
T cd06639         239 V-KTLFKI-PRNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP  288 (291)
T ss_pred             H-HHHHHH-hcCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence            0 111111 1111111111       111223588899999999999999999999873

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.47  E-value=7.7e-14  Score=102.91  Aligned_cols=121  Identities=21%  Similarity=0.301  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCc--ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||++.........  .......++..|++||.+.+..++.++|+|++|++ +++++|..|+.....   .....
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~  218 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH---SNHLA  218 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---cchHH
Confidence            3789999998765322111  11123467888999999888788899999999987 899999888642211   11111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ..........         ....+.....++.+++..||..+|.+||++.+++.|-
T Consensus       219 ~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~  265 (268)
T cd06630         219 LIFKIASATT---------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP  265 (268)
T ss_pred             HHHHHhccCC---------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence            1111100000         0112223334688899999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.47  E-value=1.5e-13  Score=102.27  Aligned_cols=117  Identities=20%  Similarity=0.293  Sum_probs=75.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||++.......   ......++..|++||.+.+    ..++.++|+|++|++ +++++|..|+....    ...
T Consensus       142 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~  214 (283)
T cd06617         142 QVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK----TPF  214 (283)
T ss_pred             CEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc----cCH
Confidence            57999999987543211   1122357788999998754    346788999999987 89999998863211    111


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ....... ..........        ....++.+++.+||..+|++||++.+|+.|-.
T Consensus       215 -~~~~~~~-~~~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~  263 (283)
T cd06617         215 -QQLKQVV-EEPSPQLPAE--------KFSPEFQDFVNKCLKKNYKERPNYPELLQHPF  263 (283)
T ss_pred             -HHHHHHH-hcCCCCCCcc--------ccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence             1111111 1111111111        12246888999999999999999999998744

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.47  E-value=6.2e-14  Score=103.25  Aligned_cols=120  Identities=24%  Similarity=0.347  Sum_probs=78.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.+........    ....++..|++||.+.+..++.++|+|++|++ +++++|..|+...... ........
T Consensus       139 ~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~  213 (265)
T cd06605         139 QIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELL  213 (265)
T ss_pred             CEEEeecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHH
Confidence            478999998865421111    11567788999999988888999999999987 8999999887432211 11122211


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..... ..     .+.+...   ....++.+++.+||..+|++|||+.+++.|-.
T Consensus       214 ~~~~~-~~-----~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~  259 (265)
T cd06605         214 QYIVN-EP-----PPRLPSG---KFSPDFQDFVNLCLIKDPRERPSYKELLEHPF  259 (265)
T ss_pred             HHHhc-CC-----CCCCChh---hcCHHHHHHHHHHcCCCchhCcCHHHHhhCch
Confidence            11111 11     0111100   13346888999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.47  E-value=5.4e-13  Score=103.68  Aligned_cols=98  Identities=18%  Similarity=0.188  Sum_probs=63.3

Q ss_pred             ccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcH
Q 041917           25 RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVG  103 (181)
Q Consensus        25 ~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (181)
                      ..+|+..|+|||++.+..++.++||||+||+ +++++|..||.....      ...................       .
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~-------~  273 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP------TETQLKVINWENTLHIPPQ-------V  273 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCH------HHHHHHHHccccccCCCCC-------C
Confidence            3578999999999988889999999999987 899999999743211      0111111110110111100       0


Q ss_pred             HHHHHHHHHHHh--hccCCCCCCCCHHHHHHHhh
Q 041917          104 AELLKYIHIGLL--CVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus       104 ~~~~~~~~l~~~--cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ....++.+++.+  |+..++..|+++.+|+.|-.
T Consensus       274 ~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~  307 (381)
T cd05626         274 KLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF  307 (381)
T ss_pred             CCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence            112356677766  55667777999999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.47  E-value=2.8e-14  Score=104.63  Aligned_cols=115  Identities=21%  Similarity=0.325  Sum_probs=77.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......|+..|++||...+..++.++|+|++|++ +++++|..|+...      ......
T Consensus       139 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~  210 (256)
T cd08218         139 TIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG------NMKNLV  210 (256)
T ss_pred             CEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC------CHHHHH
Confidence            478999999876432211  1223457788999999888888889999999987 8999998886321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .... ......         .+......+.+++.+||+.+|.+||++.+|+.|-
T Consensus       211 ~~~~-~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~  254 (256)
T cd08218         211 LKII-RGSYPP---------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKN  254 (256)
T ss_pred             HHHh-cCCCCC---------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCc
Confidence            1111 111100         1112234688899999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.47  E-value=2.2e-13  Score=105.46  Aligned_cols=121  Identities=19%  Similarity=0.191  Sum_probs=78.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC----ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG----VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~----~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||++........ .......|++.|+|||++...    .++.++|+||+||+ +++++|..||....      .
T Consensus       180 ~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~  252 (370)
T cd05596         180 HLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------L  252 (370)
T ss_pred             CEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC------H
Confidence            589999999876432211 112345789999999998643    37789999999987 89999999874211      1


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhhc
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPAR--RPSMSSVVVMLAS  136 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~evl~~L~~  136 (181)
                      .................+       ......++.+++.+||..+|++  |+++.+++.|..-
T Consensus       253 ~~~~~~i~~~~~~~~~~~-------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~  307 (370)
T cd05596         253 VGTYSKIMDHKNSLTFPD-------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFF  307 (370)
T ss_pred             HHHHHHHHcCCCcCCCCC-------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence            111111111111011111       0012346788999999998987  9999999998643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.46  E-value=6.4e-14  Score=102.00  Aligned_cols=112  Identities=22%  Similarity=0.214  Sum_probs=78.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||.++.+...     .-+.|||+-|+|||++....|+..+|.|++||+ +||+.|..||.....     +  ..
T Consensus       182 ~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~--~i  249 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----I--QI  249 (355)
T ss_pred             cEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----H--HH
Confidence            5899999999976321     345799999999999999999999999999987 999999999853321     1  11


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ...+....+.          +|.-...++.+|+.+.|+.|-.+|.     ...+|..|-+
T Consensus       250 Y~KI~~~~v~----------fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w  299 (355)
T KOG0616|consen  250 YEKILEGKVK----------FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW  299 (355)
T ss_pred             HHHHHhCccc----------CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence            2222222221          1112223577888899999988882     3445555543

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.46  E-value=2.3e-13  Score=101.69  Aligned_cols=126  Identities=21%  Similarity=0.208  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......    .....++..|++||.+....++.++|+|++|++ +++++|..|+...... ........
T Consensus       143 ~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~  217 (287)
T cd06621         143 QVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGPIELL  217 (287)
T ss_pred             eEEEeeccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-CCChHHHH
Confidence            47899999986542211    112356778999999988888999999999987 8999999887533211 11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       .......... +......  .......+.+++.+||+.+|.+|||+.||++|..-
T Consensus       218 -~~~~~~~~~~-~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~  269 (287)
T cd06621         218 -SYIVNMPNPE-LKDEPGN--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI  269 (287)
T ss_pred             -HHHhcCCchh-hccCCCC--CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence             1111111111 1100000  01123467899999999999999999999998664

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.46  E-value=7.2e-14  Score=103.82  Aligned_cols=127  Identities=17%  Similarity=0.132  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++........   ....++..|++||.+.. ..++.++|+||+||+ +++++|..|+....   .......
T Consensus       137 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~---~~~~~~~  210 (282)
T cd07831         137 ILKLADFGSCRGIYSKPPY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN---ELDQIAK  210 (282)
T ss_pred             CeEEEecccccccccCCCc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC---HHHHHHH
Confidence            5799999998765322221   22357788999997654 446788999999987 89999887763221   1111111


Q ss_pred             HHHHH-----------hcCCcccccCcc-ccc---CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLW-----------CEGEALELMDPV-LKQ---SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~-----------~~~~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .....           ..........+. ...   .........+.+++.+||+.+|++||++.+++.|-
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~  280 (282)
T cd07831         211 IHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP  280 (282)
T ss_pred             HHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence            11000           000000000000 000   00112245789999999999999999999999874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.46  E-value=8.1e-14  Score=105.19  Aligned_cols=131  Identities=18%  Similarity=0.164  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|+|||.+.+ ..++.++|+||+|++ +++++|+.||......   .....
T Consensus       142 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~---~~~~~  216 (309)
T cd07872         142 ELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE---DELHL  216 (309)
T ss_pred             CEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHH
Confidence            579999999875422111  1122357888999998865 457889999999987 8999999887432111   11111


Q ss_pred             HHHHHhcCCc------------ccccCccccc----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEA------------LELMDPVLKQ----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~------------~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ..........            ...-.+....    ........++.+++.+||+.||.+|||+.|++.|..-.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  290 (309)
T cd07872         217 IFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR  290 (309)
T ss_pred             HHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence            1110000000            0000000000    00011233578899999999999999999999986654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.46  E-value=2.2e-14  Score=106.03  Aligned_cols=120  Identities=27%  Similarity=0.345  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++.......... .....++..|++||.+.+..++.++|+|++|++ +++++ |..|+....   ......
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~---~~~~~~  220 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS---NQDVIK  220 (267)
T ss_pred             eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC---HHHHHH
Confidence            478999999886533221111 111223457999999988888999999999987 78776 887763211   111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          ......  ..       .........+.+++.+||+.+|.+||++.+|++.|+.+
T Consensus       221 ----~~~~~~--~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         221 ----AIEEGY--RL-------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ----HHhCCC--cC-------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence                111110  00       01111234678899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.46  E-value=3.2e-14  Score=104.67  Aligned_cols=118  Identities=30%  Similarity=0.399  Sum_probs=76.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++....... ........++..|++||.+.+..++.++|+|++|++ +++++ |+.|+...   ......  
T Consensus       141 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~---~~~~~~--  214 (261)
T cd05034         141 VCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM---TNREVL--  214 (261)
T ss_pred             CEEECccccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC---CHHHHH--
Confidence            47899999987653211 111112234567999999988888899999999987 89988 77775321   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       .. .... . ...   .    +......+.+++.+||..+|++||++.++++.|++
T Consensus       215 -~~-~~~~-~-~~~---~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         215 -EQ-VERG-Y-RMP---R----PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             -HH-HHcC-C-CCC---C----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence             11 1111 0 000   0    11112467889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.46  E-value=1.9e-14  Score=105.61  Aligned_cols=121  Identities=26%  Similarity=0.335  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .++|+|||.+....  ..........++..|+|||.+. ...++.++|+|++|++ +++++|..|+...   ........
T Consensus       136 ~~~l~Dfg~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~---~~~~~~~~  210 (260)
T PF00069_consen  136 EVKLIDFGSSVKLS--ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES---NSDDQLEI  210 (260)
T ss_dssp             EEEESSGTTTEEST--STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS---SHHHHHHH
T ss_pred             cccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cchhhhhh
Confidence            46899999987541  1122223456788899999988 7778899999999987 8999999887432   00011111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........    ..... .  ........+.+++..||+.||++||++.++++|-
T Consensus       211 ~~~~~~~~----~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~  258 (260)
T PF00069_consen  211 IEKILKRP----LPSSS-Q--QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHP  258 (260)
T ss_dssp             HHHHHHTH----HHHHT-T--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred             hhhccccc----ccccc-c--ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence            11111000    00000 0  0000015788999999999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.46  E-value=2.3e-13  Score=103.51  Aligned_cols=113  Identities=18%  Similarity=0.195  Sum_probs=75.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......  .......|+..|+|||.+.+..++.++||||+||+ +++++|..|+...      ......
T Consensus       134 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~------~~~~~~  205 (325)
T cd05604         134 HVVLTDFGLCKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR------DVAEMY  205 (325)
T ss_pred             CEEEeecCCcccCCCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC------CHHHHH
Confidence            57999999987432111  11234578999999999998889999999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHH----HHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMS----SVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~----evl~~  133 (181)
                      .. ......  .+.+        .....+.+++.+|++.+|.+||++.    +++.|
T Consensus       206 ~~-~~~~~~--~~~~--------~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h  251 (325)
T cd05604         206 DN-ILHKPL--VLRP--------GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH  251 (325)
T ss_pred             HH-HHcCCc--cCCC--------CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence            11 111111  1111        1223577899999999999999885    56655

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=2e-13  Score=96.71  Aligned_cols=114  Identities=18%  Similarity=0.165  Sum_probs=84.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.+...    ......+.|||.-|.+||.+.+..++..+|+|++|++ ++++.|..||...   .....    
T Consensus       162 ~lkiAdfGwsV~~----p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~---~~~et----  230 (281)
T KOG0580|consen  162 ELKIADFGWSVHA----PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ---SHSET----  230 (281)
T ss_pred             CeeccCCCceeec----CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh---hhHHH----
Confidence            4799999998653    2445567899999999999999999999999999998 9999999997422   11111    


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ...+...+.          .++..-..+..+++.+|+..+|.+|....||+.|.+-
T Consensus       231 YkrI~k~~~----------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI  276 (281)
T KOG0580|consen  231 YKRIRKVDL----------KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWI  276 (281)
T ss_pred             HHHHHHccc----------cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence            111111111          1112223368889999999999999999999999753

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.46  E-value=4.4e-14  Score=106.68  Aligned_cols=133  Identities=20%  Similarity=0.193  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch--
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL--   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~--   76 (181)
                      .+||+|||+++....... ........++..|+|||.+.+ ..++.++|+|++|++ +++++|..++...........  
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~  229 (316)
T cd07842         150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPF  229 (316)
T ss_pred             eEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchh
Confidence            479999999886532221 111223467888999998765 347788999999987 899999888753322210000  


Q ss_pred             ----HHHHHHHHhcC------------CcccccCcccccCCc---------H--HHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           77 ----LTYTWKLWCEG------------EALELMDPVLKQSCV---------G--AELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        77 ----~~~~~~~~~~~------------~~~~~~~~~~~~~~~---------~--~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                          ...........            ......+.......+         .  .....+.+++.+||+.||++|||+.|
T Consensus       230 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~e  309 (316)
T cd07842         230 QRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEE  309 (316)
T ss_pred             HHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence                00000000000            000000000000000         0  12345789999999999999999999


Q ss_pred             HHHHh
Q 041917          130 VVVML  134 (181)
Q Consensus       130 vl~~L  134 (181)
                      |+.|-
T Consensus       310 il~~~  314 (316)
T cd07842         310 ALEHP  314 (316)
T ss_pred             HhcCC
Confidence            99873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.46  E-value=1.3e-13  Score=103.49  Aligned_cols=119  Identities=23%  Similarity=0.326  Sum_probs=76.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc----cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV----FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~----~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      .+||+|||++.........   ....++..|++||.+....    ++.++|+||+|++ +++++|+.|+....  .   .
T Consensus       153 ~~kL~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~---~  224 (296)
T cd06618         153 NVKLCDFGISGRLVDSKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK--T---E  224 (296)
T ss_pred             CEEECccccchhccCCCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch--h---H
Confidence            5799999998754322111   1234677899999986543    6788999999987 89999998874211  0   0


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........ ..........       .....++.+++.+||+.||++||++.+++.|...
T Consensus       225 ~~~~~~~~-~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~  276 (296)
T cd06618         225 FEVLTKIL-QEEPPSLPPN-------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI  276 (296)
T ss_pred             HHHHHHHh-cCCCCCCCCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence            11111111 1111111000       0122468889999999999999999999988654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.46  E-value=8.7e-14  Score=102.88  Aligned_cols=122  Identities=20%  Similarity=0.229  Sum_probs=71.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-------CccCcccceeehhHH-HHHHh-cCCCCCCCcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-------GVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-------~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~   72 (181)
                      ++||+|||++................++..|+|||++..       ..++.++|+||+|++ +++++ |..|+....   
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~---  214 (269)
T cd05042         138 SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS---  214 (269)
T ss_pred             cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC---
Confidence            579999999864322111111122345667999998642       346788999999987 89888 555543211   


Q ss_pred             CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           73 GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .   ......... .....+..+.+...    ....+..++..|| .||++||++.+|++.|.
T Consensus       215 ~---~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         215 D---EQVLKQVVR-EQDIKLPKPQLDLK----YSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             H---HHHHHHHhh-ccCccCCCCccccc----CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            1   111111111 11112222222212    2234567888899 49999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.45  E-value=2.3e-14  Score=116.15  Aligned_cols=119  Identities=24%  Similarity=0.354  Sum_probs=80.9

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~~~~   78 (181)
                      +++|+|||+++.+..... ..+.....||.+|+|||.+....-...+||+++||+ +.+++| .+||+.....+.     
T Consensus       649 ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-----  723 (903)
T KOG1027|consen  649 RAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-----  723 (903)
T ss_pred             eEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-----
Confidence            689999999998765443 333456789999999999988777778999999998 666665 778743211110     


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                         ...........+.+      ...+  +..+|+.+|++.||..||+|.+|+.|.-.
T Consensus       724 ---NIl~~~~~L~~L~~------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlF  770 (903)
T KOG1027|consen  724 ---NILTGNYTLVHLEP------LPDC--EAKDLISRMLNPDPQLRPSATDVLNHPLF  770 (903)
T ss_pred             ---hhhcCccceeeecc------CchH--HHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence               00011111111111      1111  67889999999999999999999988543

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=6.1e-14  Score=106.89  Aligned_cols=116  Identities=19%  Similarity=0.218  Sum_probs=75.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....  .......+|+..|+|||.+.+. .++.++||||+||+ +++++|..|+...      .....
T Consensus       134 ~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~------~~~~~  205 (330)
T cd05586         134 HIALCDFGLSKANLTD--NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE------DTQQM  205 (330)
T ss_pred             CEEEecCCcCcCCCCC--CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC------CHHHH
Confidence            5799999998743211  1112345789999999998654 47889999999987 8999999987421      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC----CHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP----SMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp----t~~evl~~L~  135 (181)
                       ......... .+....        ....+.+++.+||+.||++||    ++.+++.|..
T Consensus       206 -~~~i~~~~~-~~~~~~--------~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~  255 (330)
T cd05586         206 -YRNIAFGKV-RFPKNV--------LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPF  255 (330)
T ss_pred             -HHHHHcCCC-CCCCcc--------CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcc
Confidence             111111111 111111        123567899999999999998    6888887754

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.45  E-value=1.1e-13  Score=101.40  Aligned_cols=115  Identities=23%  Similarity=0.298  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.......   ......|+..|++||.+.... ++.++|+|++|++ +++++|..|+....      ....
T Consensus       140 ~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~------~~~~  210 (258)
T cd06632         140 VVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE------GVAA  210 (258)
T ss_pred             CEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc------HHHH
Confidence            57999999987653322   122346788899999987666 7889999999987 89999998874321      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ............ +        +......+.+++.+||+.+|.+||++.+++.|-
T Consensus       211 ~~~~~~~~~~~~-~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~  256 (258)
T cd06632         211 VFKIGRSKELPP-I--------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHP  256 (258)
T ss_pred             HHHHHhcccCCC-c--------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence            111111011111 1        111224578899999999999999999999763

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.45  E-value=4.3e-14  Score=106.21  Aligned_cols=119  Identities=23%  Similarity=0.289  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.........  .....++..|++||.+.+..++.++|+|++|++ +++++|..|+.......  ...   
T Consensus       153 ~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~--~~~---  225 (297)
T cd06656         153 SVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--ALY---  225 (297)
T ss_pred             CEEECcCccceEccCCccC--cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch--hee---
Confidence            4799999998764322111  123467788999999988888899999999987 89999998874321100  000   


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       . .....     .+..  ..+......+.+++.+||..+|++||++.+|++|-.-
T Consensus       226 -~-~~~~~-----~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (297)
T cd06656         226 -L-IATNG-----TPEL--QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL  272 (297)
T ss_pred             -e-eccCC-----CCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchh
Confidence             0 00000     0000  0111222357789999999999999999999998543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.45  E-value=3.7e-14  Score=119.46  Aligned_cols=92  Identities=21%  Similarity=0.238  Sum_probs=61.7

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      ..|+..|+|||++.+..|+.++||||+||+ +|++++..++...     ......    ....    .+.+..     ..
T Consensus       175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~-----~~~~~~----~~~~----~~~~~~-----~~  236 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK-----SRTMSS----LRHR----VLPPQI-----LL  236 (793)
T ss_pred             cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH-----HHHHHH----HHHh----hcChhh-----hh
Confidence            357888999999998889999999999987 8998876553210     000000    0000    011100     11


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917          105 ELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .......++.+||+.+|.+||++.||++|..
T Consensus       237 ~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        237 NWPKEASFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             cCHHHHHHHHHhCCCChhhCcChHHHhhchh
Confidence            1234567888999999999999999998754

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.45  E-value=4.3e-14  Score=105.23  Aligned_cols=127  Identities=23%  Similarity=0.185  Sum_probs=74.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|+|||.+.+. .++.++|+|++|++ +++++|+.|+.....   ......
T Consensus       139 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~---~~~~~~  213 (285)
T cd07861         139 VIKLADFGLARAFGIPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE---IDQLFR  213 (285)
T ss_pred             cEEECcccceeecCCCcc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH---HHHHHH
Confidence            579999999875432111  11223567889999987654 46788999999987 899999887642111   000000


Q ss_pred             HHHHHhcC----------------CcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEG----------------EALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........                .........+. ........++.+++.+||..||++|||+.+|+.|-
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~  283 (285)
T cd07861         214 IFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP  283 (285)
T ss_pred             HHHHhCCCChhhhhcchhhHHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCC
Confidence            00000000                00000000000 00011234677899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.45  E-value=5.3e-14  Score=103.01  Aligned_cols=116  Identities=34%  Similarity=0.373  Sum_probs=74.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++........... ....++..|++||.+....++.++|+|++|++ +++++ |..|+..      ......
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~------~~~~~~  213 (258)
T smart00219      141 VVKISDFGLSRDLYDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG------MSNEEV  213 (258)
T ss_pred             eEEEcccCCceeccccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC------CCHHHH
Confidence            479999999876543211111 11235678999999877778899999999987 78887 5555421      111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .... .......         .+......+.+++.+||..||++|||+.++++.|
T Consensus       214 ~~~~-~~~~~~~---------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      214 LEYL-KKGYRLP---------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHH-hcCCCCC---------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            1111 1111110         0111234688899999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=4e-14  Score=104.63  Aligned_cols=117  Identities=23%  Similarity=0.326  Sum_probs=74.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++.......  .......|+..|+|||.+..     ..++.++|+|++|++ +++++|..|+....   .  
T Consensus       151 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~--  223 (275)
T cd06608         151 EVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH---P--  223 (275)
T ss_pred             eEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc---h--
Confidence            47899999987543221  11223467888999998753     336678999999987 89999988863211   0  


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                       ...... ......     +..  ..+......+.+++.+||..||++|||+.+|+.|-
T Consensus       224 -~~~~~~-~~~~~~-----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~  273 (275)
T cd06608         224 -MRALFK-IPRNPP-----PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP  273 (275)
T ss_pred             -HHHHHH-hhccCC-----CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence             011111 111100     001  11122334688999999999999999999999863

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.45  E-value=1.5e-13  Score=113.63  Aligned_cols=119  Identities=13%  Similarity=0.144  Sum_probs=77.4

Q ss_pred             eeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHH
Q 041917            4 KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWK   82 (181)
Q Consensus         4 ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~   82 (181)
                      ++.|||.++...............||..|+|||++.+..++.++|||++||+ +++++|..||...      ........
T Consensus       518 ~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~------~~~~~~~~  591 (669)
T cd05610         518 IGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDE------TPQQVFQN  591 (669)
T ss_pred             ccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHH
Confidence            4567777665432222222234689999999999998889999999999987 8999999887421      11111111


Q ss_pred             HHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           83 LWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ... ... .+  +....    .....+.+++..||..||.+||++.+++.|...
T Consensus       592 il~-~~~-~~--p~~~~----~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~  637 (669)
T cd05610         592 ILN-RDI-PW--PEGEE----KLSVNAQNAIEILLTMDPTKRAGLKELKQHPLF  637 (669)
T ss_pred             HHh-cCC-CC--Ccccc----cCCHHHHHHHHHHcccChhHCcCHHHHHhCHhh
Confidence            111 110 01  10001    122357788899999999999999999999664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.45  E-value=1.9e-14  Score=110.02  Aligned_cols=128  Identities=20%  Similarity=0.139  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......  .......++..|++||.+.. ..++.++|+|++|++ +++++|..|+....   .......
T Consensus       146 ~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~  220 (337)
T cd07858         146 DLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD---YVHQLKL  220 (337)
T ss_pred             CEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC---hHHHHHH
Confidence            47999999987643221  11223457888999998764 457889999999987 89999988764321   1000000


Q ss_pred             HHHHHhc-----------CCccc-------ccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCE-----------GEALE-------LMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~-----------~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .......           .....       ....... .........+.+++.+||+.+|++|||+.+|+.|-.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~  293 (337)
T cd07858         221 ITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY  293 (337)
T ss_pred             HHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence            0000000           00000       0000000 001122346789999999999999999999999933

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.45  E-value=1.7e-13  Score=101.53  Aligned_cols=114  Identities=17%  Similarity=0.220  Sum_probs=76.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||+++.....      ....++..|+|||++.+..++.++|+||+|++ +++++|..|+..... .......+.
T Consensus       148 ~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~  220 (267)
T PHA03390        148 RIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLL  220 (267)
T ss_pred             eEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHH
Confidence            5799999998764321      12357888999999988888899999999987 899999988752211 111111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-MSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-~~evl~~L  134 (181)
                      ...  .. ....         .......+.+++.+||+.+|.+|++ +.++++|-
T Consensus       221 ~~~--~~-~~~~---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~  263 (267)
T PHA03390        221 KRQ--QK-KLPF---------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHP  263 (267)
T ss_pred             Hhh--cc-cCCc---------ccccCHHHHHHHHHHhccChhhCCchHHHHhcCC
Confidence            111  00 0011         1123346888999999999999996 69999764

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.45  E-value=6.4e-14  Score=104.37  Aligned_cols=128  Identities=22%  Similarity=0.252  Sum_probs=74.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|++||.+.+ ..++.++||||+|++ +++++|..++.....   ......
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~---~~~~~~  212 (286)
T cd07846         138 VVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD---IDQLYH  212 (286)
T ss_pred             cEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch---HHHHHH
Confidence            479999999876433221  1223457788999998865 346788999999987 899999876632111   000000


Q ss_pred             HHHH-----------HhcCCcc-cccCccccc-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKL-----------WCEGEAL-ELMDPVLKQ-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~-----------~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ....           ....... ....+....     .........+.+++.+||..+|++||++.+|+.|-
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~  284 (286)
T cd07846         213 IIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE  284 (286)
T ss_pred             HHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence            0000           0000000 000000000     00112234688999999999999999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=8.4e-14  Score=107.31  Aligned_cols=131  Identities=17%  Similarity=0.198  Sum_probs=89.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC----cc-
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG----HS-   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~----~~-   75 (181)
                      ++||+|||=++....     +.+.-+.|..|.+||++.+..|+..+||||++|+ +|++||-..|....+...    .. 
T Consensus       392 ~vKIaDlGNACW~~k-----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi  466 (590)
T KOG1290|consen  392 RVKIADLGNACWVHK-----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI  466 (590)
T ss_pred             eEEEeeccchhhhhh-----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence            689999998886422     2233467889999999999999999999999998 999999887754333221    11 


Q ss_pred             --hHHHHH----HH-HhcCCcccccCcc-----------------c--ccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           76 --LLTYTW----KL-WCEGEALELMDPV-----------------L--KQSCVGAELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        76 --~~~~~~----~~-~~~~~~~~~~~~~-----------------~--~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                        +++...    .. .....-.++++..                 +  +-.++..+..+|.+|+.-||+.+|++||||.+
T Consensus       467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~  546 (590)
T KOG1290|consen  467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ  546 (590)
T ss_pred             HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence              111110    00 0111111222110                 0  01456677888999999999999999999999


Q ss_pred             HHHHhhcC
Q 041917          130 VVVMLASD  137 (181)
Q Consensus       130 vl~~L~~~  137 (181)
                      .++|.+-.
T Consensus       547 cl~hPwLn  554 (590)
T KOG1290|consen  547 CLKHPWLN  554 (590)
T ss_pred             HhcCcccc
Confidence            99987654

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.45  E-value=2e-13  Score=102.02  Aligned_cols=119  Identities=22%  Similarity=0.256  Sum_probs=78.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......|+..|++||...+..++.++|+|++|++ +++++|..|+...   .   .....
T Consensus       153 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~---~---~~~~~  224 (285)
T cd06648         153 RVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE---P---PLQAM  224 (285)
T ss_pred             cEEEcccccchhhccCCc--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC---C---HHHHH
Confidence            578999998765432211  1123467889999999988888899999999987 8999999886321   1   11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ......     +....  .......+.+++.+||+.+|++||++.+++.|-..
T Consensus       225 ~~-~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (285)
T cd06648         225 KR-IRDNLP-----PKLKN--LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFL  272 (285)
T ss_pred             HH-HHhcCC-----CCCcc--cccCCHHHHHHHHHHcccChhhCcCHHHHccCccc
Confidence            11 111110     11100  01122368899999999999999999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.44  E-value=2.2e-13  Score=103.60  Aligned_cols=113  Identities=20%  Similarity=0.208  Sum_probs=75.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  ........|+..|+|||++.+..++.++|+||+|++ +++++|..|+....      .....
T Consensus       139 ~ikL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~  210 (323)
T cd05615         139 HIKIADFGMCKEHMVD--GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELF  210 (323)
T ss_pred             CEEEeccccccccCCC--CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            5799999998753211  111233568999999999988888999999999987 89999998874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~  133 (181)
                      .. ...... ..         +.....++.+++.+||+.+|.+|++.     .+++.|
T Consensus       211 ~~-i~~~~~-~~---------p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         211 QS-IMEHNV-SY---------PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             HH-HHhCCC-CC---------CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence            11 111110 11         11122467889999999999999984     566666

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.44  E-value=5.6e-14  Score=106.52  Aligned_cols=117  Identities=25%  Similarity=0.301  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||++.....      .....|+..|++||.+.   ...++.++|+|++|++ +++++|..|+...      ...
T Consensus       163 ~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~------~~~  230 (317)
T cd06635         163 QVKLADFGSASIASP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAM  230 (317)
T ss_pred             CEEEecCCCccccCC------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc------cHH
Confidence            478999998764321      12245778899999874   3457789999999987 8999999886321      111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .......... ....        ........+.+++.+||+.+|.+||++.+|+.|+.....
T Consensus       231 ~~~~~~~~~~-~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         231 SALYHIAQNE-SPTL--------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HHHHHHHhcc-CCCC--------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence            1111111111 0000        011223357889999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.44  E-value=1.6e-14  Score=110.29  Aligned_cols=131  Identities=19%  Similarity=0.152  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||++.......... ......|+..|+|||.+.+ ..++.++|+||+|++ +++++|+.++....   ......
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~---~~~~~~  220 (336)
T cd07849         144 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD---YLHQLN  220 (336)
T ss_pred             CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHH
Confidence            57999999987643221111 1123467889999998754 457888999999987 89999998874211   000000


Q ss_pred             HHHHHHhcCC-----------ccccc---CcccccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           79 YTWKLWCEGE-----------ALELM---DPVLKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~-----------~~~~~---~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..........           ....+   .......   .......++.+++.+||+.||++|||+.+++.|-.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~  294 (336)
T cd07849         221 LILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY  294 (336)
T ss_pred             HHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            0000000000           00000   0000000   00111346789999999999999999999999943

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.44  E-value=7.4e-14  Score=105.44  Aligned_cols=116  Identities=27%  Similarity=0.328  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++......      ....++..|++||.+.   ...++.++||||+|++ +++++|..|+....   .   .
T Consensus       153 ~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~---~  220 (308)
T cd06634         153 LVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---A---M  220 (308)
T ss_pred             cEEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc---H---H
Confidence            4789999998754321      1235778899999874   3456788999999987 89999988863211   0   0


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ..... ..........        .......+.+++.+||+.+|++||++.+|+.|.....
T Consensus       221 ~~~~~-~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         221 SALYH-IAQNESPALQ--------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             HHHHH-HhhcCCCCcC--------cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            11111 1111110000        1122345788999999999999999999999977654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.44  E-value=2.8e-13  Score=98.97  Aligned_cols=119  Identities=24%  Similarity=0.334  Sum_probs=79.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.+................++..|.+||.......+.++|+|++|++ +++++|..|+....     ......
T Consensus       139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~  213 (260)
T cd06606         139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAAL  213 (260)
T ss_pred             CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHH
Confidence            578999999886543322111223467788999999988778899999999987 89999998874322     111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .........         ...+......+.+++.+||..+|.+||++.+++.|-
T Consensus       214 ~~~~~~~~~---------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~  258 (260)
T cd06606         214 YKIGSSGEP---------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHP  258 (260)
T ss_pred             HhccccCCC---------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence            111100011         111112235688899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.44  E-value=9.3e-14  Score=103.59  Aligned_cols=118  Identities=22%  Similarity=0.341  Sum_probs=76.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc------cCcccceeehhHH-HHHHhcCCCCCCCcCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV------FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~------~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~   74 (181)
                      .+||+|||++......    ......++..|++||.+.+..      ++.++|+|++||+ +++++|..|+....   ..
T Consensus       141 ~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~  213 (286)
T cd06622         141 QVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET---YA  213 (286)
T ss_pred             CEEEeecCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc---hh
Confidence            4799999998754211    112235777899999885433      4678999999987 89999998874321   11


Q ss_pred             chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           75 SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......... .....     +    ..+......+.+++.+||+.+|++||++.+++.|..-
T Consensus       214 ~~~~~~~~~-~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~  265 (286)
T cd06622         214 NIFAQLSAI-VDGDP-----P----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL  265 (286)
T ss_pred             hHHHHHHHH-hhcCC-----C----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhh
Confidence            111111111 11110     1    1122234467889999999999999999999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=1.1e-13  Score=102.75  Aligned_cols=118  Identities=25%  Similarity=0.341  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .++|+|||++.......  .......|+..|+|||.+.. ..++.++|+|++|++ +++++|..|+.....      ...
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~------~~~  210 (277)
T cd06917         139 NVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA------FRA  210 (277)
T ss_pred             CEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh------hhh
Confidence            47899999987654322  11223467888999998764 346789999999987 899999988742211      100


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ...     ....+.+...   ....++.+++.+||+.||++||++.+++.+-..
T Consensus       211 ~~-~~~-----~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~  258 (277)
T cd06917         211 MM-LIP-----KSKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKSKWI  258 (277)
T ss_pred             hh-ccc-----cCCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHh
Confidence            00 000     0001111111   123468889999999999999999999987544

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.44  E-value=2.4e-13  Score=103.17  Aligned_cols=117  Identities=20%  Similarity=0.242  Sum_probs=83.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++-+..   +.....++||++.|..||++.+..|. ..+|.|++|++ +.++.|.+||...      +....
T Consensus       191 NiKIADFGLSNly~---~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~------Dhk~l  261 (668)
T KOG0611|consen  191 NIKIADFGLSNLYA---DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR------DHKRL  261 (668)
T ss_pred             Ceeeeccchhhhhc---cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc------hHHHH
Confidence            57999999997652   33334578999999999999999987 56999999997 7889999998532      22222


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      +.. +..+...+...|           -...-|++.||..+|++|-|+.+|..|.+-.+.
T Consensus       262 vrQ-Is~GaYrEP~~P-----------SdA~gLIRwmLmVNP~RRATieDiAsHWWvNwg  309 (668)
T KOG0611|consen  262 VRQ-ISRGAYREPETP-----------SDASGLIRWMLMVNPERRATIEDIASHWWVNWG  309 (668)
T ss_pred             HHH-hhcccccCCCCC-----------chHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence            222 122222222222           135567788999999999999999999886544

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.44  E-value=3.3e-13  Score=100.28  Aligned_cols=128  Identities=19%  Similarity=0.181  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||.+........  ......++..|++||.+.+. .++.++|+|++|++ +++++|+.++...   ........
T Consensus       136 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~---~~~~~~~~  210 (283)
T cd05118         136 VLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGK---SEIDQLFK  210 (283)
T ss_pred             cEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHH
Confidence            579999999876543221  11223567789999998765 67889999999987 8999998776321   11111111


Q ss_pred             HHHHHhcCC---cc-----------cccCcc--cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGE---AL-----------ELMDPV--LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~---~~-----------~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .........   ..           ......  ...........++.+++.+||+.||.+||++.+++.|-
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~  281 (283)
T cd05118         211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP  281 (283)
T ss_pred             HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence            111000000   00           000000  00001112345688999999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.44  E-value=2.5e-13  Score=104.22  Aligned_cols=121  Identities=24%  Similarity=0.324  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccC----ccCcccceeehhHH-HHHHhcCCCCCCCcCC
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEG----VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK   71 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~----~~~~~~diws~gv~-~~~~~g~~~~~~~~~~   71 (181)
                      .+||+|||+++.+..+...     .......||.+|++||++...    ..+.++||||+||+ +..+.|+.||+.....
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            4799999999988654432     123456899999999998643    36789999999998 8999999998643221


Q ss_pred             CCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           72 DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .  .++.. .......++.-...|        .-..+..+|+++||++.-++|...-++..+
T Consensus       691 Q--dILqe-NTIlkAtEVqFP~KP--------vVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  691 Q--DILQE-NTILKATEVQFPPKP--------VVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             H--HHHhh-hchhcceeccCCCCC--------ccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence            1  11110 000011111111111        112357788999999999999888776654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.44  E-value=9.4e-14  Score=102.14  Aligned_cols=115  Identities=26%  Similarity=0.355  Sum_probs=77.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......  ......|+..|++||...+..++.++|+|++|++ +++++|..++..      .......
T Consensus       143 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~------~~~~~~~  214 (260)
T cd08222         143 LLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG------QNFLSVV  214 (260)
T ss_pred             CEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC------ccHHHHH
Confidence            368999999876533222  1223467888999999887778889999999987 899999887631      1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .. .....     .+..    +.....++.+++.+||..+|++||++.++++|-
T Consensus       215 ~~-~~~~~-----~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  258 (260)
T cd08222         215 LR-IVEGP-----TPSL----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNP  258 (260)
T ss_pred             HH-HHcCC-----CCCC----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCC
Confidence            11 11111     1111    123334688899999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.43  E-value=7.3e-14  Score=103.07  Aligned_cols=117  Identities=19%  Similarity=0.226  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....... ........|+..|++||.+.+..++.++|+|++|++ +++++|..|+...     ......
T Consensus       144 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~-----~~~~~~  218 (265)
T cd06652         144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF-----EAMAAI  218 (265)
T ss_pred             CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc-----chHHHH
Confidence            579999999875432111 111223457888999999988788899999999987 8999999886321     111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                       .......     ..+    ..+......+.+++.+||. +|+.||++++|++|.
T Consensus       219 -~~~~~~~-----~~~----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~  262 (265)
T cd06652         219 -FKIATQP-----TNP----VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT  262 (265)
T ss_pred             -HHHhcCC-----CCC----CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence             1111000     011    1122333467788889995 899999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.43  E-value=2.9e-13  Score=98.52  Aligned_cols=115  Identities=23%  Similarity=0.395  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||.+........   .....++..|++||.+....++.+.|+|++|++ +++++|..|+....      .....
T Consensus       136 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~  206 (253)
T cd05122         136 EVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP------PMKAL  206 (253)
T ss_pred             eEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc------hHHHH
Confidence            578999999876543221   223467888999999987778889999999987 89999998863221      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .... ..........       ......+.+++.+||+.||++|||+.+|+.|
T Consensus       207 ~~~~-~~~~~~~~~~-------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         207 FKIA-TNGPPGLRNP-------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHH-hcCCCCcCcc-------cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1111 1111111111       1113468889999999999999999999987

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.43  E-value=8.3e-14  Score=101.95  Aligned_cols=113  Identities=23%  Similarity=0.259  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++......    ......++..|++||.+.+..++.++|+|++|++ +++++|..|+...      ......
T Consensus       141 ~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~------~~~~~~  210 (256)
T cd08530         141 LVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR------SMQDLR  210 (256)
T ss_pred             cEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            4789999998765332    1112357788999999988888889999999987 8999999886321      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      . ........         ..+.....++.+++.+||+.+|++||++.++++|.
T Consensus       211 ~-~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p  254 (256)
T cd08530         211 Y-KVQRGKYP---------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP  254 (256)
T ss_pred             H-HHhcCCCC---------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence            1 11111111         11123345688999999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.43  E-value=7.9e-14  Score=105.21  Aligned_cols=136  Identities=18%  Similarity=0.164  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.........  .....++..|+|||.+.+ ..++.++|+|++|++ +++++|..|+....   .......
T Consensus       146 ~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~---~~~~~~~  220 (309)
T cd07845         146 CLKIADFGLARTYGLPAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS---EIEQLDL  220 (309)
T ss_pred             CEEECccceeeecCCccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            5799999998865322111  111234678999999865 447888999999987 89999988764221   1111111


Q ss_pred             HHHHHhcC--Ccc---------ccc---Cccccc--CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           80 TWKLWCEG--EAL---------ELM---DPVLKQ--SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        80 ~~~~~~~~--~~~---------~~~---~~~~~~--~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      ........  ...         ..+   ......  .........+.+++.+||+.||++|||+.+|+.|..-.....+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~  299 (309)
T cd07845         221 IIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP  299 (309)
T ss_pred             HHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence            11100000  000         000   000000  0001124467889999999999999999999999776544443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.43  E-value=3.2e-13  Score=100.46  Aligned_cols=128  Identities=20%  Similarity=0.175  Sum_probs=74.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH-
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT-   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~-   78 (181)
                      .+||+|||++.........   ....++..|++||.+.. ..++.++|+|++|++ +++++|..++.......  .... 
T Consensus       137 ~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~--~~~~~  211 (283)
T cd07830         137 VVKIADFGLAREIRSRPPY---TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID--QLYKI  211 (283)
T ss_pred             CEEEeecccceeccCCCCc---CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH--HHHHH
Confidence            5799999998765322221   22357788999998754 446788999999987 89999987764321100  0000 


Q ss_pred             -----------HHHHHHhcCCcccccCcccc---cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           79 -----------YTWKLWCEGEALELMDPVLK---QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        79 -----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                                 +.............+.....   ..........+.+++.+||+.+|++|||+.||+.+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~  281 (283)
T cd07830         212 CSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP  281 (283)
T ss_pred             HHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCC
Confidence                       00000000000000000000   000001134688999999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.42  E-value=6.7e-13  Score=102.85  Aligned_cols=121  Identities=20%  Similarity=0.223  Sum_probs=75.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc----cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV----FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~----~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||+++....... ......+|++.|+|||++....    ++.++||||+||+ +++++|..||...      ..
T Consensus       180 ~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~  252 (371)
T cd05622         180 HLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SL  252 (371)
T ss_pred             CEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC------CH
Confidence            589999999986532211 1123457899999999986532    7789999999987 8999999997421      11


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhhc
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPAR--RPSMSSVVVMLAS  136 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~evl~~L~~  136 (181)
                      ...............+.+.       ......+.+++..|+..++.+  |+++.+|+.|...
T Consensus       253 ~~~~~~i~~~~~~~~~~~~-------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~  307 (371)
T cd05622         253 VGTYSKIMNHKNSLTFPDD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF  307 (371)
T ss_pred             HHHHHHHHcCCCcccCCCc-------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence            1111111111111111111       112235778888999744433  7899999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.42  E-value=1.3e-13  Score=103.34  Aligned_cols=118  Identities=22%  Similarity=0.289  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......++..|++||.+....++.++|+|++|++ +++++|..|+..........     
T Consensus       153 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-----  225 (293)
T cd06647         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----  225 (293)
T ss_pred             CEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-----
Confidence            478999998875432211  1223457788999999888778899999999987 89999998874321110000     


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ......      .+..  .........+.+++.+||..+|++||++.+++.|-.
T Consensus       226 -~~~~~~------~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~  271 (293)
T cd06647         226 -LIATNG------TPEL--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPF  271 (293)
T ss_pred             -ehhcCC------CCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence             000000      0000  001112235778999999999999999999999843

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.42  E-value=2.6e-13  Score=99.59  Aligned_cols=110  Identities=25%  Similarity=0.343  Sum_probs=72.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC--ccCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG--VFSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~--~~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++.....      .....+...|++||.+...  .++.++|+||+|++ +++++| ..|+....   .... 
T Consensus       146 ~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~---~~~~-  215 (259)
T cd05037         146 FIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS---SSEK-  215 (259)
T ss_pred             eEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC---chhH-
Confidence            479999999875432      1123456679999998776  67889999999987 898885 44432211   0000 


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                         .........  ...+         ....+.+++.+||..+|.+||++.+|++.|.
T Consensus       216 ---~~~~~~~~~--~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         216 ---ERFYQDQHR--LPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             ---HHHHhcCCC--CCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence               011111110  0011         0146889999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.42  E-value=3.1e-13  Score=99.02  Aligned_cols=114  Identities=24%  Similarity=0.330  Sum_probs=76.5

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTW   81 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~   81 (181)
                      +||+|||.+........  ......|+..|+|||......++.++|+|++|++ +++++|..|+...      .......
T Consensus       141 ~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~  212 (257)
T cd08225         141 AKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN------NLHQLVL  212 (257)
T ss_pred             EEecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc------cHHHHHH
Confidence            58999998876532221  1122457888999999888788899999999987 8999998886321      1111111


Q ss_pred             HHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           82 KLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ... ..... .+.+        .....+.+++.+||..+|++|||+.+|+.|.
T Consensus       213 ~~~-~~~~~-~~~~--------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~  255 (257)
T cd08225         213 KIC-QGYFA-PISP--------NFSRDLRSLISQLFKVSPRDRPSITSILKRP  255 (257)
T ss_pred             HHh-cccCC-CCCC--------CCCHHHHHHHHHHhccChhhCcCHHHHhhCC
Confidence            111 11111 1111        1223588899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.42  E-value=5e-14  Score=105.94  Aligned_cols=131  Identities=16%  Similarity=0.171  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|++||.+.+. .++.++|+|++|++ +++++|..|+.....   ......
T Consensus       142 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~---~~~~~~  216 (301)
T cd07873         142 ELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV---EEQLHF  216 (301)
T ss_pred             cEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            579999999875322111  11223567889999987653 46788999999987 899999988743211   111111


Q ss_pred             HHHHHhcC---Cccccc---------CcccccCC----cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEG---EALELM---------DPVLKQSC----VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~---~~~~~~---------~~~~~~~~----~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ........   .....+         .+.....+    .......+.+++.+||+.||.+|||+.||+.|-...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~  290 (301)
T cd07873         217 IFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH  290 (301)
T ss_pred             HHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            10000000   000000         00000000    011123567899999999999999999999986543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.42  E-value=9.1e-14  Score=103.47  Aligned_cols=128  Identities=23%  Similarity=0.228  Sum_probs=76.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++........  ......++..|++||.+.+ ..++.++|+||+|++ +++++|..|+.....   ......
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~---~~~~~~  212 (286)
T cd07847         138 QIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD---VDQLYL  212 (286)
T ss_pred             cEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh---HHHHHH
Confidence            579999999986543221  1122356778999999865 447788999999987 899999888742211   111111


Q ss_pred             HHHHHhc-----------CCc-ccccCcccccCCc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCE-----------GEA-LELMDPVLKQSCV-----GAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~-----------~~~-~~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .......           ... .....+......+     ......+.+++.+||+.+|++||++.|++.|.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~  284 (286)
T cd07847         213 IRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP  284 (286)
T ss_pred             HHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence            0000000           000 0000000000000     01134578999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.42  E-value=9.4e-13  Score=102.01  Aligned_cols=121  Identities=17%  Similarity=0.182  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc----cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV----FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~----~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||++........ .......|+..|+|||++.+..    ++.++|+||+||+ +++++|..||....      .
T Consensus       180 ~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------~  252 (370)
T cd05621         180 HLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------L  252 (370)
T ss_pred             CEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------H
Confidence            589999999986532211 1223457999999999986533    6788999999987 89999999974221      1


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhhc
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPAR--RPSMSSVVVMLAS  136 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~evl~~L~~  136 (181)
                      ...............+...       ......+.+++..|+..++.+  |+++.|+++|..-
T Consensus       253 ~~~~~~i~~~~~~~~~p~~-------~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~  307 (370)
T cd05621         253 VGTYSKIMDHKNSLNFPED-------VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF  307 (370)
T ss_pred             HHHHHHHHhCCcccCCCCc-------ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCccc
Confidence            1111111111111111110       111234667788888755543  8999999999553

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.42  E-value=6.9e-14  Score=105.27  Aligned_cols=129  Identities=19%  Similarity=0.151  Sum_probs=74.6

Q ss_pred             CceeeceecceeecCCCCc--ccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++.........  .......++..|+|||.+.+.. ++.++|+||+|++ +++++|..++.....   ....
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~---~~~~  233 (310)
T cd07865         157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE---QHQL  233 (310)
T ss_pred             cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH---HHHH
Confidence            4799999998755322111  1112335677899999876543 6788999999987 899999877632211   1111


Q ss_pred             HHHHHHHhcCCcccc---------------cCcc---cccC-CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           78 TYTWKLWCEGEALEL---------------MDPV---LKQS-CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~---------------~~~~---~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ....... .......               ....   .... ........+.+++.+||..||.+|||+.++++|-
T Consensus       234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~  308 (310)
T cd07865         234 TLISQLC-GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD  308 (310)
T ss_pred             HHHHHHh-CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence            1111110 0000000               0000   0000 0001123467899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.42  E-value=4.9e-13  Score=99.37  Aligned_cols=109  Identities=23%  Similarity=0.313  Sum_probs=70.0

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHH-hcCCCCCCCcCCCCcchHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIV-SGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~-~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +|++|||++......      ....++..|++||.+.+ ..++.++|+|++|++ ++++ .|..|+.....   ......
T Consensus       163 ~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~  233 (274)
T cd05076         163 IKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP---SEKERF  233 (274)
T ss_pred             eeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh---HHHHHH
Confidence            688999987543211      11246678999998865 557889999999986 7875 56666532111   111110


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                          ....  .....+         ....+.+++.+||+.+|++||++.+|+++|.
T Consensus       234 ----~~~~--~~~~~~---------~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         234 ----YEKK--HRLPEP---------SCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ----HHhc--cCCCCC---------CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence                1100  011111         1135788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.42  E-value=7.7e-13  Score=99.96  Aligned_cols=130  Identities=17%  Similarity=0.182  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCC-----cccccccccCCCccCccccccC--ccCcccceeehhHH-HHHHhcCCCCCCCcCCCC
Q 041917            2 NPKISDFGMARIFGGNQN-----EANTNRVVGTYGYMAPEYAMEG--VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-----~~~~~~~~g~~~~~aPe~~~~~--~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~   73 (181)
                      .+||+|||.+........     ........++..|++||.+...  .++.++|+||+|++ +++++|..|+.....   
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~---  215 (314)
T cd08216         139 KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA---  215 (314)
T ss_pred             ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---
Confidence            478999998865432111     1111223566789999998653  47789999999987 899999988743211   


Q ss_pred             cchHHHHHHHHhc--------------CCccc----ccCcc----cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 041917           74 HSLLTYTWKLWCE--------------GEALE----LMDPV----LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVV  131 (181)
Q Consensus        74 ~~~~~~~~~~~~~--------------~~~~~----~~~~~----~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl  131 (181)
                        ...........              .....    ...+.    ............+.+++..||.+||++|||+.+++
T Consensus       216 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll  293 (314)
T cd08216         216 --TQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL  293 (314)
T ss_pred             --HHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence              11111100000              00000    00000    00111222344678899999999999999999999


Q ss_pred             HHhhc
Q 041917          132 VMLAS  136 (181)
Q Consensus       132 ~~L~~  136 (181)
                      .|..-
T Consensus       294 ~~p~~  298 (314)
T cd08216         294 NHSFF  298 (314)
T ss_pred             cCchH
Confidence            98654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.42  E-value=2.1e-13  Score=101.47  Aligned_cols=129  Identities=19%  Similarity=0.151  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++.......... .....++..|++||.+.+ ..++.++|+|++|++ +++++|..|+....   .......
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~---~~~~~~~  213 (287)
T cd07840         138 VLKLADFGLARPYTKRNSAD-YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST---ELEQLEK  213 (287)
T ss_pred             CEEEccccceeeccCCCccc-ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHH
Confidence            57999999987654322111 122345778999998764 346788999999987 89999988763211   1111111


Q ss_pred             HHHHHhcCCcccc-----------------cCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALEL-----------------MDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ............+                 ....+...........+.+++.+||+.+|++||++.+|+.+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~  285 (287)
T cd07840         214 IFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE  285 (287)
T ss_pred             HHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence            1111000000000                 000000000011245688999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.42  E-value=1.3e-13  Score=102.49  Aligned_cols=116  Identities=23%  Similarity=0.379  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++.......  .......++..|++||.+....++.++|+|++|++ +++++|..|+....      .....
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~------~~~~~  210 (277)
T cd06641         139 EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH------PMKVL  210 (277)
T ss_pred             CEEEeecccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc------hHHHH
Confidence            47899999987543211  11223467788999999887778889999999987 89999988763211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ......     +.+    ......++.+++.+||+.+|.+||++.+++.|..
T Consensus       211 ~~-~~~~~~-----~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~  255 (277)
T cd06641         211 FL-IPKNNP-----PTL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF  255 (277)
T ss_pred             HH-HhcCCC-----CCC----CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence            11 111111     111    1112345788999999999999999999999843

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=4e-13  Score=103.67  Aligned_cols=97  Identities=20%  Similarity=0.131  Sum_probs=64.4

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      .+|++.|+|||++....++.++||||+||+ +++++|..||....      ....................       ..
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~-------~~  265 (364)
T cd05599         199 TVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN------PQETYRKIINWKETLQFPDE-------VP  265 (364)
T ss_pred             cccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC------HHHHHHHHHcCCCccCCCCC-------CC
Confidence            468999999999988889999999999987 89999998874321      11111111111100111110       01


Q ss_pred             HHHHHHHHHHhhccCCCCCCCC---HHHHHHHhhc
Q 041917          105 ELLKYIHIGLLCVQEDPARRPS---MSSVVVMLAS  136 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~Rpt---~~evl~~L~~  136 (181)
                      ...++.+++.+|+. +|.+|++   +.+++.|...
T Consensus       266 ~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~  299 (364)
T cd05599         266 LSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF  299 (364)
T ss_pred             CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence            12357788888886 8999998   9999998643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=3.9e-13  Score=99.93  Aligned_cols=119  Identities=20%  Similarity=0.323  Sum_probs=75.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++......  ........++..|++||.+.     ...++.++|+|++|++ +++++|..|+....      
T Consensus       141 ~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~------  212 (280)
T cd06611         141 DVKLADFGVSAKNKST--LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN------  212 (280)
T ss_pred             CEEEccCccchhhccc--ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC------
Confidence            4789999987654221  11122346788899999874     3346778999999987 89999998863211      


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........ .....     +.+  ..+.....++.+++.+||+.+|.+||++.+|++|-.-
T Consensus       213 ~~~~~~~~-~~~~~-----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  265 (280)
T cd06611         213 PMRVLLKI-LKSEP-----PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV  265 (280)
T ss_pred             HHHHHHHH-hcCCC-----CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhh
Confidence            11111111 11100     000  0111223367889999999999999999999998553

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.41  E-value=2.1e-13  Score=104.70  Aligned_cols=135  Identities=22%  Similarity=0.256  Sum_probs=84.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cC-----cccceeehhHH-HHHHhcCCCCCC-CcCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FS-----IKSDVFSFGVL-LEIVSGKRNSGF-YLSKDG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~-----~~~diws~gv~-~~~~~g~~~~~~-~~~~~~   73 (181)
                      ++-|+|||++..+............+||.+|||||++.+.. +.     .+.|||++|.+ ||++++...... ..+...
T Consensus       354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yq  433 (534)
T KOG3653|consen  354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQ  433 (534)
T ss_pred             cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccc
Confidence            56699999999876555555555678999999999997643 22     35899999966 898876543311 000000


Q ss_pred             ---------cchHHHHHHHHhcCCcccccCcccccCCcH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           74 ---------HSLLTYTWKLWCEGEALELMDPVLKQSCVG-AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        74 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                               +...+..+......    ..+|.++..+.. .....+.+.+..||..|++.|.|+.-|.+++.++...
T Consensus       434 lpfe~evG~hPt~e~mq~~VV~k----K~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~  506 (534)
T KOG3653|consen  434 LPFEAEVGNHPTLEEMQELVVRK----KQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML  506 (534)
T ss_pred             CchhHHhcCCCCHHHHHHHHHhh----ccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence                     11111111111111    112222221111 2234577899999999999999999999999887554

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.41  E-value=2.5e-13  Score=102.29  Aligned_cols=130  Identities=18%  Similarity=0.175  Sum_probs=74.8

Q ss_pred             CceeeceecceeecCCCCcc---------cccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQNEA---------NTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~---------~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      ++||+|||++..........         ......++..|+|||.+.+. .++.++|+|++|++ +++++|..++.... 
T Consensus       153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~-  231 (311)
T cd07866         153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS-  231 (311)
T ss_pred             CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC-
Confidence            57999999987543221110         11223567789999987654 47788999999987 89999987763211 


Q ss_pred             CCCcchHHHHHHHHhcCC---------ccccc----CcccccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           71 KDGHSLLTYTWKLWCEGE---------ALELM----DPVLKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                        ................         .....    .......   ........+.+++.+||+.||++|||+.+++.|-
T Consensus       232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~  309 (311)
T cd07866         232 --DIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP  309 (311)
T ss_pred             --HHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence              1111111111100000         00000    0000000   0001124678999999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.41  E-value=2.4e-13  Score=101.20  Aligned_cols=127  Identities=20%  Similarity=0.174  Sum_probs=73.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|++||.+.+.. ++.++|+|++|++ +++++|+.|+.....  .......
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~  213 (284)
T cd07860         138 AIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE--IDQLFRI  213 (284)
T ss_pred             CEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH
Confidence            579999999875432111  112234677899999886644 5778999999987 899999988743211  0001000


Q ss_pred             HHHHHhcC----------------CcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEG----------------EALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      . ......                ........... ........++.+++.+||+.||++|||+++++.|-
T Consensus       214 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  282 (284)
T cd07860         214 F-RTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHP  282 (284)
T ss_pred             H-HHhCCCChhhhhhhhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCC
Confidence            0 000000                00000000000 00011123567899999999999999999999773

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.41  E-value=2e-13  Score=101.71  Aligned_cols=118  Identities=22%  Similarity=0.243  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.......    .....|+..|++||.+. +..++.++|+|++|++ +++++|..||.......   ... 
T Consensus       135 ~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~-  206 (279)
T cd05633         135 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHE-  206 (279)
T ss_pred             CEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC---HHH-
Confidence            47899999986542211    12246888999999886 3557889999999987 89999999874322111   111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~~  137 (181)
                      .......      ....    .+.....++.+++.+||+.||++|+     ++.++++|....
T Consensus       207 ~~~~~~~------~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~  259 (279)
T cd05633         207 IDRMTLT------VNVE----LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK  259 (279)
T ss_pred             HHHHhhc------CCcC----CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence            1111000      0111    1112234678899999999999999     699999986544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=4.6e-13  Score=103.99  Aligned_cols=116  Identities=19%  Similarity=0.206  Sum_probs=84.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      -+||.|||+++.+.   .....-++|||+-|.|||++..+..+..+|.|++|++ +|+++|..||....   .....+.+
T Consensus       558 y~KLVDFGFAKki~---~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d---pmktYn~I  631 (732)
T KOG0614|consen  558 YLKLVDFGFAKKIG---SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD---PMKTYNLI  631 (732)
T ss_pred             ceEEeehhhHHHhc---cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc---hHHHHHHH
Confidence            37999999999764   3334456899999999999999999999999999987 99999999985432   23333333


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~  135 (181)
                      .....   ...++..         ......+++++....+|..|..     +.+|.+|-+
T Consensus       632 LkGid---~i~~Pr~---------I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W  679 (732)
T KOG0614|consen  632 LKGID---KIEFPRR---------ITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW  679 (732)
T ss_pred             Hhhhh---hhhcccc---------cchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence            32222   2222222         1224677888888899999987     788888864

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.41  E-value=2e-13  Score=104.24  Aligned_cols=133  Identities=19%  Similarity=0.185  Sum_probs=79.3

Q ss_pred             CceeeceecceeecCCCCc--ccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+++........  .......|+..|++||.+.+ ..++.++|+|++|++ +++++|+.||.....   ....
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~---~~~~  221 (334)
T cd07855         145 ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY---VHQL  221 (334)
T ss_pred             cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh---HHHH
Confidence            4799999998765332211  11123467889999998765 457889999999987 899999888743211   0000


Q ss_pred             HHHHHHHhc-----------CCcccccCcc-cccC-----CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCE-----------GEALELMDPV-LKQS-----CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~-----------~~~~~~~~~~-~~~~-----~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .........           .......+.. ....     ........+.+++.+||+.+|++||++.+++.|....
T Consensus       222 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~  298 (334)
T cd07855         222 KLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA  298 (334)
T ss_pred             HHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence            000000000           0000000000 0000     0011245688999999999999999999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.41  E-value=3.7e-13  Score=99.09  Aligned_cols=118  Identities=19%  Similarity=0.231  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......++..|++||.+....++.++|+|++|++ +++++|..|+.....    ......
T Consensus       131 ~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~  203 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE----DPMEIY  203 (262)
T ss_pred             CEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC----CHHHHH
Confidence            57999999987653321   1223467888999999888788899999999987 899999988743321    111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~  135 (181)
                      ..........         ..+.....++.+++.+||+.+|++||+     +.|+++|-.
T Consensus       204 ~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~  254 (262)
T cd05572         204 NDILKGNGKL---------EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW  254 (262)
T ss_pred             HHHhccCCCC---------CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence            1111001100         111111346889999999999999999     888888644

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.41  E-value=3.3e-13  Score=99.23  Aligned_cols=118  Identities=27%  Similarity=0.430  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++.........  .....++..|++||.+....++.++|+|++|++ +++++|..|+.....   .......
T Consensus       138 ~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~---~~~~~~~  212 (264)
T cd06623         138 EVKIADFGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ---PSFFELM  212 (264)
T ss_pred             CEEEccCccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc---cCHHHHH
Confidence            4789999998765332221  123457788999999988888899999999987 899999988643221   1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .. ......... ..    .   .....+.+++..||+.+|+.||++.+++.+
T Consensus       213 ~~-~~~~~~~~~-~~----~---~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         213 QA-ICDGPPPSL-PA----E---EFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HH-HhcCCCCCC-Cc----c---cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            11 111111111 10    0   023468889999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.41  E-value=1.8e-13  Score=104.50  Aligned_cols=129  Identities=18%  Similarity=0.176  Sum_probs=76.4

Q ss_pred             CceeeceecceeecCCCCc---ccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNE---ANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~---~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      .+||+|||++.........   .......|+..|++||.+.+ ..++.++|+|++|++ +++++|+.++.......   .
T Consensus       145 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~---~  221 (337)
T cd07852         145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN---Q  221 (337)
T ss_pred             cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH---H
Confidence            5799999998765322211   11223467889999998764 446788999999987 89999998874321110   0


Q ss_pred             HHHHHHH-----------HhcCCcccccCcccc------cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           77 LTYTWKL-----------WCEGEALELMDPVLK------QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        77 ~~~~~~~-----------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .......           .........++....      .........++.+++.+||+.||++|||+.+++.|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         222 LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0000000           000000000000000      00001123468899999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.41  E-value=7.3e-13  Score=97.45  Aligned_cols=119  Identities=25%  Similarity=0.355  Sum_probs=75.8

Q ss_pred             CceeeceecceeecCCCCccc--ccccccCCCccCccccccCc---cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEAN--TNRVVGTYGYMAPEYAMEGV---FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~--~~~~~g~~~~~aPe~~~~~~---~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++...........  .....++..|++||.+....   +..++|+|++|++ +++++|..|+....   .. 
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~---~~-  212 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD---NE-  212 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc---ch-
Confidence            479999999876543222111  11245678899999987665   7788999999987 89999998874221   11 


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                       ...... ........     +...  ......+.+++.+||+.+|.+||++.+++.|
T Consensus       213 -~~~~~~-~~~~~~~~-----~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         213 -FQIMFH-VGAGHKPP-----IPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             -HHHHHH-HhcCCCCC-----CCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence             111111 11111111     1100  0113357789999999999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.41  E-value=3.9e-13  Score=100.64  Aligned_cols=127  Identities=24%  Similarity=0.214  Sum_probs=75.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|++||.+.+.. ++.++|+||+|++ +++++|..++.....   ......
T Consensus       144 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~---~~~~~~  218 (293)
T cd07843         144 ILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE---IDQLNK  218 (293)
T ss_pred             cEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHH
Confidence            479999999886543211  112235677899999886543 5788999999987 899999887643211   111110


Q ss_pred             HHHHHh-----------c------CCcccccCcccccCCcHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           80 TWKLWC-----------E------GEALELMDPVLKQSCVGA-ELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        80 ~~~~~~-----------~------~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ......           .      ..........+....+.. ....+.+++.+||+.+|++|||+.||+.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         219 IFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             HHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            000000           0      000000000001111111 23457889999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.40  E-value=1.1e-13  Score=101.09  Aligned_cols=114  Identities=25%  Similarity=0.377  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......  .......|+..|++||......++.++|+|++|++ +++++|..|+....      .....
T Consensus       141 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~  212 (258)
T cd08215         141 LVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELA  212 (258)
T ss_pred             cEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHH
Confidence            47899999987653322  12223467888999999888888899999999986 89999988763211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ... .......+         +......+.+++.+||..+|++||++.+|+.|
T Consensus       213 ~~~-~~~~~~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         213 LKI-LKGQYPPI---------PSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHH-hcCCCCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            111 11111111         11222467889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.40  E-value=9.7e-13  Score=101.61  Aligned_cols=42  Identities=33%  Similarity=0.477  Sum_probs=37.9

Q ss_pred             ccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCC
Q 041917           25 RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSG   66 (181)
Q Consensus        25 ~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~   66 (181)
                      ..+|+..|+|||++.+..++.++|+||+||+ +++++|..||.
T Consensus       195 ~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             cccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence            3579999999999988889999999999987 89999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.40  E-value=1.2e-13  Score=105.11  Aligned_cols=131  Identities=20%  Similarity=0.187  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCc-ccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .++|+|||++......... .......++..|++||.+.+. .++.++|+|++|++ +++++|..|+.....   .....
T Consensus       141 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~---~~~~~  217 (330)
T cd07834         141 DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY---IDQLN  217 (330)
T ss_pred             CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH---HHHHH
Confidence            5799999999865432210 112234678889999999877 68889999999987 899999888643211   00000


Q ss_pred             HHHHHHhc-----------CCcccccCcc-ccc-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           79 YTWKLWCE-----------GEALELMDPV-LKQ-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~-----------~~~~~~~~~~-~~~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........           ......+... ...     .........+.+++.+||+++|.+||++.+++.|..
T Consensus       218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  291 (330)
T cd07834         218 LIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY  291 (330)
T ss_pred             HHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence            00000000           0000000000 000     000112346788999999999999999999999843

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.40  E-value=2.7e-13  Score=110.64  Aligned_cols=118  Identities=21%  Similarity=0.283  Sum_probs=86.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .||++|||++.-+.  .+.....+..||+.|||||++..     ..|+.++|+||+|+. +++..|..|+....+...  
T Consensus       161 ~VKLvDFGvSaQld--sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--  236 (953)
T KOG0587|consen  161 EVKLVDFGVSAQLD--STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--  236 (953)
T ss_pred             cEEEeeeeeeeeee--cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh--
Confidence            58999999987653  34445567899999999999863     447889999999998 899999887642221110  


Q ss_pred             hHHHHHHHHhcCCccccc-CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELM-DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                                   ++.++ .|......+..+..+|.+++..||..|-++||++.++++|-..
T Consensus       237 -------------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi  285 (953)
T KOG0587|consen  237 -------------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI  285 (953)
T ss_pred             -------------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence                         01111 1222233456778899999999999999999999999988643

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.40  E-value=3.7e-13  Score=100.21  Aligned_cols=130  Identities=19%  Similarity=0.199  Sum_probs=75.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .++|+|||++........ .......++..|++||.+.+. .++.++|||++|++ +++++|..++....   .......
T Consensus       137 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~---~~~~~~~  212 (286)
T cd07832         137 VLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN---DIEQLAI  212 (286)
T ss_pred             cEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC---HHHHHHH
Confidence            478999999876532221 112234678889999988654 36788999999987 89999965543211   1111111


Q ss_pred             HHHHHhcCCc------cc------ccCcccc----cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEA------LE------LMDPVLK----QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~------~~------~~~~~~~----~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..........      ..      ...+...    ..........+.+++.+||..+|.+||++++++.|..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~  284 (286)
T cd07832         213 VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY  284 (286)
T ss_pred             HHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence            1110000000      00      0000000    0000112357889999999999999999999998853

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.39  E-value=1.2e-12  Score=101.56  Aligned_cols=97  Identities=18%  Similarity=0.119  Sum_probs=63.2

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      .+|+..|+|||++.+..++.++||||+||+ +++++|..||.....      ..................       ...
T Consensus       204 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~~~~-------~~~  270 (376)
T cd05598         204 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTP------AETQLKVINWETTLHIPS-------QAK  270 (376)
T ss_pred             cCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCH------HHHHHHHhccCccccCCC-------CCC
Confidence            578999999999998889999999999987 899999999743211      111011111000000000       011


Q ss_pred             HHHHHHHHHHhhccCCCCCCC---CHHHHHHHhhc
Q 041917          105 ELLKYIHIGLLCVQEDPARRP---SMSSVVVMLAS  136 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~Rp---t~~evl~~L~~  136 (181)
                      ...++.+++.+|+ .+|.+|+   ++.+++.|..-
T Consensus       271 ~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~  304 (376)
T cd05598         271 LSREASDLILRLC-CGAEDRLGKNGADEIKAHPFF  304 (376)
T ss_pred             CCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCc
Confidence            1234666777766 4999999   99999999543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.39  E-value=2.1e-13  Score=101.48  Aligned_cols=127  Identities=22%  Similarity=0.183  Sum_probs=73.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|++||.+.+. .++.++|+|++|++ +++++|..|+.....  .......
T Consensus       137 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~  212 (283)
T cd07835         137 ALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE--IDQLFRI  212 (283)
T ss_pred             cEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence            578999999875422111  11122457789999987654 46788999999987 899999887642211  0000000


Q ss_pred             HHHHHhcC------------C----cccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEG------------E----ALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~------------~----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .. .....            .    ......... ..........+.+++.+||+.||++|||+.+|+.|.
T Consensus       213 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~  281 (283)
T cd07835         213 FR-TLGTPDEDVWPGVTSLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP  281 (283)
T ss_pred             HH-HhCCCChHHhhhhhhchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCC
Confidence            00 00000            0    000000000 000111224678899999999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.39  E-value=8.8e-14  Score=106.95  Aligned_cols=123  Identities=20%  Similarity=0.227  Sum_probs=81.2

Q ss_pred             CceeeceecceeecCCC---CcccccccccCCCccCccccccC---cc-CcccceeehhHH-HHHHhcCCCCCCCcCCCC
Q 041917            2 NPKISDFGMARIFGGNQ---NEANTNRVVGTYGYMAPEYAMEG---VF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~---~~~~~~~~~g~~~~~aPe~~~~~---~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~   73 (181)
                      ++||+|||.+.......   .........||+.|+|||.+...   .+ +.+.|||++||. +.++.|+.||...     
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~-----  322 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD-----  322 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc-----
Confidence            68999999987652211   11122235899999999998762   23 377999999986 8899999998321     


Q ss_pred             cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           74 HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                       ..+..-.+ +....+ .++.       .......+.+|+.++|.+||+.|.+..+|..|++-...
T Consensus       323 -~~~~l~~K-Ivn~pL-~fP~-------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  323 -FELELFDK-IVNDPL-EFPE-------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             -hHHHHHHH-HhcCcc-cCCC-------cccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence             11111111 111111 1111       11233467889999999999999999999999875543

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.39  E-value=9.8e-13  Score=102.23  Aligned_cols=96  Identities=19%  Similarity=0.181  Sum_probs=61.6

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      .+|+..|+|||++.+..++.++||||+||+ +++++|..||.....      ..................       ...
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~~~~p~-------~~~  274 (382)
T cd05625         208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP------LETQMKVINWQTSLHIPP-------QAK  274 (382)
T ss_pred             cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCH------HHHHHHHHccCCCcCCCC-------ccc
Confidence            468999999999998889999999999987 899999999743211      111111111010001110       011


Q ss_pred             HHHHHHHHHHhhccCCCCCCCC---HHHHHHHhh
Q 041917          105 ELLKYIHIGLLCVQEDPARRPS---MSSVVVMLA  135 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~Rpt---~~evl~~L~  135 (181)
                      ...++.+++.+++ .+|++|++   +.+++.|-.
T Consensus       275 ~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~  307 (382)
T cd05625         275 LSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPF  307 (382)
T ss_pred             CCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCC
Confidence            1234666666655 58999997   999998854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=5e-12  Score=96.51  Aligned_cols=122  Identities=18%  Similarity=0.166  Sum_probs=72.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||++......... ......|+..|+|||++..     ..++.++|||++||+ +++++|+.|+...      .
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~------~  212 (331)
T cd05597         140 HIRLADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------S  212 (331)
T ss_pred             CEEEEECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC------C
Confidence            5799999998754322211 1122468999999999863     346788999999987 8999999987421      1


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccC--CCCCCCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE--DPARRPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~--dp~~Rpt~~evl~~L~~  136 (181)
                      ................+... .     ......+.+++.+|+..  ++..|+++.+++.|..-
T Consensus       213 ~~~~~~~i~~~~~~~~~~~~-~-----~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~  269 (331)
T cd05597         213 LVETYGKIMNHKEHFQFPPD-V-----TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF  269 (331)
T ss_pred             HHHHHHHHHcCCCcccCCCc-c-----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence            11111111111111111110 0     01223466677776644  44448899999999653

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.39  E-value=2.1e-13  Score=104.43  Aligned_cols=124  Identities=22%  Similarity=0.224  Sum_probs=74.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.....     .....++..|+|||.+.+ ..++.++|+||+|++ +++++|+.||...   ........
T Consensus       155 ~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~---~~~~~~~~  226 (342)
T cd07879         155 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK---DYLDQLTQ  226 (342)
T ss_pred             CEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHH
Confidence            5799999998753211     122356778999999866 457889999999987 8999999887431   11111110


Q ss_pred             HHHHH-----------hcCCcccccC--ccc-ccCC---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           80 TWKLW-----------CEGEALELMD--PVL-KQSC---VGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        80 ~~~~~-----------~~~~~~~~~~--~~~-~~~~---~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .....           ........+.  +.. ....   .......+.+++.+||+.||++||++.+|+.|
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         227 ILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             HHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00000           0000000000  000 0000   00122357899999999999999999999988

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.39  E-value=3.4e-13  Score=100.94  Aligned_cols=128  Identities=22%  Similarity=0.190  Sum_probs=73.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|+|||.+.+ ..++.++|+|++|++ +++++|..|+......  ..... 
T Consensus       149 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~-  223 (295)
T cd07837         149 LLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL--QQLLH-  223 (295)
T ss_pred             eEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH-
Confidence            479999999875422111  1112245778999998765 446889999999987 8999998876432110  00000 


Q ss_pred             HHHHHhcCCcccc------c----Cccccc----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALEL------M----DPVLKQ----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~------~----~~~~~~----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .............      .    .+....    ........++.+++.+||..||.+||++.|++.|-
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~  292 (295)
T cd07837         224 IFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP  292 (295)
T ss_pred             HHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence            0000000000000      0    000000    00011234578899999999999999999999873

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.38  E-value=1.1e-12  Score=98.89  Aligned_cols=119  Identities=19%  Similarity=0.161  Sum_probs=73.2

Q ss_pred             CceeeceecceeecCCCC-------------cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQN-------------EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-------------~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      ++||+|||+++.......             ........++..|++||.+.+..++.++|+|++|++ +++++|..|+..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            579999998863210000             000112356778999999888888999999999987 899999988742


Q ss_pred             CcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH---HHHHHHh
Q 041917           68 YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM---SSVVVML  134 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~---~evl~~L  134 (181)
                      .      ......... ..... .  .+....    .....+.+++.+||+.||++||++   .+++.|.
T Consensus       219 ~------~~~~~~~~~-~~~~~-~--~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~  274 (305)
T cd05609         219 D------TPEELFGQV-ISDDI-E--WPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR  274 (305)
T ss_pred             C------CHHHHHHHH-Hhccc-C--CCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence            1      111111111 11111 0  111110    122357889999999999999984   5555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.37  E-value=4.4e-13  Score=99.80  Aligned_cols=118  Identities=25%  Similarity=0.276  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++.......    .....|+..|++||.+... .++.++|+|++|++ +++++|..|+.........   . 
T Consensus       135 ~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~---~-  206 (278)
T cd05606         135 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---E-  206 (278)
T ss_pred             CEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH---H-
Confidence            57999999987542211    1234688899999998743 57888999999987 8999999887432111111   1 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~~  137 (181)
                      ........      ...+    +......+.+++.+||..+|..||     ++.++++|.+..
T Consensus       207 ~~~~~~~~------~~~~----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~  259 (278)
T cd05606         207 IDRMTLTM------AVEL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR  259 (278)
T ss_pred             HHHHhhcc------CCCC----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence            11111000      1111    111234688899999999999999     999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.37  E-value=1.5e-12  Score=97.08  Aligned_cols=119  Identities=24%  Similarity=0.315  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......++..|++||.+.+..++.++|+|++|++ +++++|..|+...     ... ...
T Consensus       154 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~-----~~~-~~~  225 (286)
T cd06614         154 SVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE-----PPL-RAL  225 (286)
T ss_pred             CEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC-----CHH-HHH
Confidence            478999998764322111  1123456778999999888888999999999987 8999998886321     111 111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ...........       .......+.+++.+||+.+|..||++.+|+.+..-
T Consensus       226 ~~-~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  273 (286)
T cd06614         226 FL-ITTKGIPPLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFL  273 (286)
T ss_pred             HH-HHhcCCCCCcc-------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHh
Confidence            11 11111111100       11122467889999999999999999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.37  E-value=3e-13  Score=101.17  Aligned_cols=129  Identities=16%  Similarity=0.144  Sum_probs=74.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......  ......++..|++||.+.+. .++.++|+||+|++ +++++|..|+......  ......
T Consensus       141 ~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~  216 (291)
T cd07870         141 ELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEK  216 (291)
T ss_pred             cEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHH
Confidence            479999999875422111  11223567889999998653 46788999999987 8999999887432110  000000


Q ss_pred             HHHHHhcC---------CcccccCcccccCC---------cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEG---------EALELMDPVLKQSC---------VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~---------~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........         ..............         .......+.+++.+|+..||++|||+.|++.|-
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~  289 (291)
T cd07870         217 IWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP  289 (291)
T ss_pred             HHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCC
Confidence            00000000         00000000000000         001124577899999999999999999998763

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.37  E-value=1.3e-12  Score=100.16  Aligned_cols=133  Identities=14%  Similarity=0.075  Sum_probs=75.5

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++.......... .....++..|+|||.+.. ..++.++||||+||+ +++++|+.|+......  .....
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~--~~~~~  230 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL--EQMQL  230 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            368999999876432111111 112246778999998654 457788999999987 8999999887422110  00000


Q ss_pred             HHHHH---------HhcCCcccccC-cccccCCc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKL---------WCEGEALELMD-PVLKQSCV-----GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~---------~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .....         .........+. .......+     .....++.+++.+||..||++|||+.+|+.|-.-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~  303 (342)
T cd07854         231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM  303 (342)
T ss_pred             HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcc
Confidence            00000         00000000000 00000000     0122457889999999999999999999988554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=2e-13  Score=103.24  Aligned_cols=95  Identities=17%  Similarity=0.133  Sum_probs=65.0

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      ..|+..|++||.+.+..++.++||||+|++ +++++|..|+.....   .   ....... .... ....       ...
T Consensus       192 ~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~---~---~~~~~~~-~~~~-~~~~-------~~~  256 (316)
T cd05574         192 FVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR---D---ETFSNIL-KKEV-TFPG-------SPP  256 (316)
T ss_pred             CcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch---H---HHHHHHh-cCCc-cCCC-------ccc
Confidence            467888999999988888899999999987 899999998742211   0   0001111 1100 0000       001


Q ss_pred             HHHHHHHHHHhhccCCCCCCCC----HHHHHHHhh
Q 041917          105 ELLKYIHIGLLCVQEDPARRPS----MSSVVVMLA  135 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~Rpt----~~evl~~L~  135 (181)
                      ....+.+++.+||..||++||+    +.+++.|-+
T Consensus       257 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~  291 (316)
T cd05574         257 VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF  291 (316)
T ss_pred             cCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCch
Confidence            2346889999999999999999    899988743

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.37  E-value=1.8e-12  Score=97.22  Aligned_cols=119  Identities=19%  Similarity=0.194  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +++|+|||++........  ......|+..|++||.+....++.++|+|++|++ +++++|..|+...   ..   ....
T Consensus       154 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~---~~---~~~~  225 (292)
T cd06657         154 RVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PP---LKAM  225 (292)
T ss_pred             CEEEcccccceecccccc--cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CH---HHHH
Confidence            478999998865432211  1223467888999999887778889999999987 8999998886321   11   1111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ... .....+..      .......+.+++.+||..+|.+||++.+|+.|-..
T Consensus       226 ~~-~~~-~~~~~~~~------~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~  273 (292)
T cd06657         226 KM-IRD-NLPPKLKN------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL  273 (292)
T ss_pred             HH-HHh-hCCcccCC------cccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHH
Confidence            11 100 00000000      01112356788999999999999999999997443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.37  E-value=1.1e-12  Score=106.45  Aligned_cols=128  Identities=17%  Similarity=0.162  Sum_probs=71.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC----------------------ccCcccceeehhHH-HHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG----------------------VFSIKSDVFSFGVL-LEI   58 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~----------------------~~~~~~diws~gv~-~~~   58 (181)
                      ++||+|||+++....... .......+++.|+|||.+...                      .+..++||||+||+ +++
T Consensus       294 ~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el  372 (566)
T PLN03225        294 SFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQM  372 (566)
T ss_pred             cEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHH
Confidence            589999999975432222 122346788999999965322                      23445699999987 888


Q ss_pred             HhcCCCCCCCcCCCCcchHHHHHHHHh-cCCcc---cccCccc----cc--CCcHHHHHHHHHHHHhhccCCCCCCCCHH
Q 041917           59 VSGKRNSGFYLSKDGHSLLTYTWKLWC-EGEAL---ELMDPVL----KQ--SCVGAELLKYIHIGLLCVQEDPARRPSMS  128 (181)
Q Consensus        59 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~----~~--~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~  128 (181)
                      +.+..+..       .....+...... .....   ..+.+..    ..  ..........++|+.+||+.||++|||+.
T Consensus       373 ~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~  445 (566)
T PLN03225        373 AFPNLRSD-------SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK  445 (566)
T ss_pred             HhCcCCCc-------hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence            87544321       111111100000 00000   0000000    00  00001112356899999999999999999


Q ss_pred             HHHHHhhcC
Q 041917          129 SVVVMLASD  137 (181)
Q Consensus       129 evl~~L~~~  137 (181)
                      |+++|-.-.
T Consensus       446 e~L~Hpff~  454 (566)
T PLN03225        446 AALAHPYFD  454 (566)
T ss_pred             HHhCCcCcC
Confidence            999996543

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.37  E-value=1.2e-12  Score=97.92  Aligned_cols=129  Identities=17%  Similarity=0.178  Sum_probs=73.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|+|||.+.+ ..++.++|+||+|++ +++++|..++.....  .......
T Consensus       141 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~  216 (291)
T cd07844         141 ELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD--VEDQLHK  216 (291)
T ss_pred             CEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHH
Confidence            579999999865321111  1112245778999998865 447888999999987 899999888642210  0001100


Q ss_pred             HHHHHhcCC------------ccc----cc-CcccccCCc-HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGE------------ALE----LM-DPVLKQSCV-GAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~------------~~~----~~-~~~~~~~~~-~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .........            ...    .. ...+..... ......+.+++.+||+.+|++||++.+++.|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~  289 (291)
T cd07844         217 IFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP  289 (291)
T ss_pred             HHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence            000000000            000    00 000000000 00114577899999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=1.5e-12  Score=101.02  Aligned_cols=97  Identities=18%  Similarity=0.097  Sum_probs=63.0

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      .+|+..|+|||++.+..++.++||||+||+ +++++|..||....   .   ...............+.+.       ..
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---~---~~~~~~i~~~~~~~~~p~~-------~~  274 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN---S---HETYRKIINWRETLYFPDD-------IH  274 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC---H---HHHHHHHHccCCccCCCCC-------CC
Confidence            468999999999988889999999999987 89999999874221   1   1111111111111111110       01


Q ss_pred             HHHHHHHHHHhhccCCCCCC---CCHHHHHHHhhc
Q 041917          105 ELLKYIHIGLLCVQEDPARR---PSMSSVVVMLAS  136 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~R---pt~~evl~~L~~  136 (181)
                      ...++.+++.+|+. +|.+|   +++.+++.|..-
T Consensus       275 ~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~  308 (377)
T cd05629         275 LSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFF  308 (377)
T ss_pred             CCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCc
Confidence            12357788889997 66665   599999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.36  E-value=3.1e-13  Score=103.59  Aligned_cols=118  Identities=24%  Similarity=0.222  Sum_probs=82.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +++|+|+|||..+......   ....||..|||||++.+..|+...|.|++||+ ++|+.|..||.....+...   +.+
T Consensus       325 hvRISDLGLAvei~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~---eEv  398 (591)
T KOG0986|consen  325 HVRISDLGLAVEIPEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR---EEV  398 (591)
T ss_pred             CeEeeccceEEecCCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH---HHH
Confidence            7899999999876543333   23489999999999999999999999999997 9999999997432221111   011


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L~  135 (181)
                      ......          -...++...+.+..+|....|.+||++|...     .+|.+|..
T Consensus       399 drr~~~----------~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hpf  448 (591)
T KOG0986|consen  399 DRRTLE----------DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPF  448 (591)
T ss_pred             HHHHhc----------chhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcc
Confidence            111100          0112334455678889999999999999855     47887753

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.36  E-value=5.2e-13  Score=102.36  Aligned_cols=128  Identities=21%  Similarity=0.193  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......     .....++..|++||.+.+ ..++.++|+|++|++ +++++|+.|+....   .......
T Consensus       156 ~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~---~~~~~~~  227 (343)
T cd07851         156 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD---HIDQLKR  227 (343)
T ss_pred             CEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHH
Confidence            4799999998754221     123456788999998765 356788999999987 89999998874221   1111110


Q ss_pred             HHHHHh-----------cCCcccccCccc---ccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWC-----------EGEALELMDPVL---KQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~-----------~~~~~~~~~~~~---~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......           .......+....   ...   ........+.+++.+||+.+|++|||+.+|+.|-.-.
T Consensus       228 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~  302 (343)
T cd07851         228 IMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA  302 (343)
T ss_pred             HHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence            000000           000000000000   000   0011245688999999999999999999999985443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.36  E-value=1.3e-12  Score=97.05  Aligned_cols=128  Identities=23%  Similarity=0.219  Sum_probs=75.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|+|||.+... .++.+.|+|++|++ +++++|..++....   .......
T Consensus       136 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~---~~~~~~~  210 (282)
T cd07829         136 VLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS---EIDQLFK  210 (282)
T ss_pred             CEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc---HHHHHHH
Confidence            579999999876532211  11123456779999998766 67889999999987 89999977763211   1111000


Q ss_pred             HHHHHhc---------CCc--ccccCccccc----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCE---------GEA--LELMDPVLKQ----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~---------~~~--~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .......         ...  ....-+....    .........+.+++.+||..+|++||++.+|+.|-
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p  280 (282)
T cd07829         211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP  280 (282)
T ss_pred             HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence            0000000         000  0000000000    00001134688999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.36  E-value=2.8e-13  Score=100.39  Aligned_cols=119  Identities=24%  Similarity=0.265  Sum_probs=74.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++..... .........++..|++||.+.+..++.++|||++|++ +++++ |..|+...   .....   
T Consensus       155 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~---~~~~~---  227 (275)
T cd05046         155 EVKVSLLSLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL---SDEEV---  227 (275)
T ss_pred             cEEEcccccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc---chHHH---
Confidence            4689999987643211 1111222345667999999887778889999999987 78887 55554211   11111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ........ ...   .    ......+.+++.+||+.+|++||++.+++.+|.+
T Consensus       228 ~~-~~~~~~~~-~~~---~----~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         228 LN-RLQAGKLE-LPV---P----EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             HH-HHHcCCcC-CCC---C----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence            11 11111111 100   1    1122368889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.36  E-value=1.3e-12  Score=96.76  Aligned_cols=116  Identities=22%  Similarity=0.238  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCC------------------cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcC
Q 041917            2 NPKISDFGMARIFGGNQN------------------EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK   62 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~------------------~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~   62 (181)
                      +++|+|||++........                  ........++..|++||......++.++|+|++|++ +++++|.
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~  219 (280)
T cd05581         140 HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK  219 (280)
T ss_pred             CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            578999999875532221                  112233467788999999887778889999999987 8999999


Q ss_pred             CCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH----HHHHHHh
Q 041917           63 RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM----SSVVVML  134 (181)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~----~evl~~L  134 (181)
                      .|+....     ....+ .. .... ....         +......+.+++.+||+.+|.+||++    .+++.|.
T Consensus       220 ~p~~~~~-----~~~~~-~~-~~~~-~~~~---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~  278 (280)
T cd05581         220 PPFRGSN-----EYLTF-QK-ILKL-EYSF---------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHP  278 (280)
T ss_pred             CCCCCcc-----HHHHH-HH-HHhc-CCCC---------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCC
Confidence            8874321     11111 11 1100 0001         11113457899999999999999999    8888764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.36  E-value=1.2e-12  Score=98.15  Aligned_cols=131  Identities=17%  Similarity=0.140  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......++..|++||.+.+ ..++.++|+|++|++ +++++|..++...   ........
T Consensus       140 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~---~~~~~~~~  214 (298)
T cd07841         140 VLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGD---SDIDQLGK  214 (298)
T ss_pred             CEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCC---ccHHHHHH
Confidence            579999999876533211  1122345678999998754 456788999999987 8999995554321   11111111


Q ss_pred             HHHHHhcC---------CcccccCccccc-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEG---------EALELMDPVLKQ-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~---------~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ........         ............     .........+.+++.+||+.||++|||+.||+.|-.-.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~  286 (298)
T cd07841         215 IFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS  286 (298)
T ss_pred             HHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence            11100000         000000000000     01112245688999999999999999999999985443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.36  E-value=9.6e-13  Score=99.63  Aligned_cols=114  Identities=25%  Similarity=0.322  Sum_probs=73.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++.....      .....|+..|++||.+.   ...++.++|+|++|++ +++++|..|+...   ..   .
T Consensus       159 ~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~---~~---~  226 (313)
T cd06633         159 QVKLADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---NA---M  226 (313)
T ss_pred             CEEEeecCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---Ch---H
Confidence            478999998764211      12346788899999974   3457788999999987 8999998886321   11   1


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........ .........        .....+.+++.+||+.+|.+||++.+++.|..-
T Consensus       227 ~~~~~~~~-~~~~~~~~~--------~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~  276 (313)
T cd06633         227 SALYHIAQ-NDSPTLQSN--------EWTDSFRGFVDYCLQKIPQERPASAELLRHDFV  276 (313)
T ss_pred             HHHHHHHh-cCCCCCCcc--------ccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence            11111111 111111111        112347789999999999999999999988554

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.36  E-value=3.2e-13  Score=101.40  Aligned_cols=128  Identities=19%  Similarity=0.199  Sum_probs=74.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........ .......++..|++||.+.+. .++.++|||++|++ +++++|+.++...   ........
T Consensus       154 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~---~~~~~~~~  229 (302)
T cd07864         154 QIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQAN---QELAQLEL  229 (302)
T ss_pred             cEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---ChHHHHHH
Confidence            579999999876532221 111122456789999987643 46788999999987 8999998776321   11111111


Q ss_pred             HHHHHhcCCccccc-----------Cc------ccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELM-----------DP------VLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~-----------~~------~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ............+.           +.      ..... .......+.+++.+||+.||.+||++.+|+.|-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~  300 (302)
T cd07864         230 ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSP  300 (302)
T ss_pred             HHHHhCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence            11111110000000           00      00000 001134688999999999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.36  E-value=4.5e-13  Score=100.36  Aligned_cols=129  Identities=21%  Similarity=0.193  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|++||.+.+ ..++.++|+|++|++ +++++|..|+.....   ......
T Consensus       141 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~---~~~~~~  215 (294)
T PLN00009        141 ALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE---IDELFK  215 (294)
T ss_pred             EEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            378999999875432211  1122356778999998865 346788999999987 899999888743211   111000


Q ss_pred             HHHHHhcCC--c-------cccc--CcccccC----CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGE--A-------LELM--DPVLKQS----CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~--~-------~~~~--~~~~~~~----~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .........  .       ....  .+.....    ........+.+++.+||+.+|++||++.+++.|-.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~  286 (294)
T PLN00009        216 IFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEY  286 (294)
T ss_pred             HHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence            000000000  0       0000  0000000    00112335788999999999999999999998743

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=2e-12  Score=95.04  Aligned_cols=114  Identities=19%  Similarity=0.143  Sum_probs=73.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++....      .....++..|++||.+.+..++.++|+|++|++ +++++|..|+...   ..   ... 
T Consensus       135 ~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~---~~---~~~-  201 (260)
T cd05611         135 HLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAE---TP---DAV-  201 (260)
T ss_pred             cEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCC---CH---HHH-
Confidence            578999998875322      123457788999999888778899999999987 8999999887321   11   111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH---HHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM---SSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~---~evl~~L  134 (181)
                      ......... .. ....    .......+.+++.+||+.+|++||++   .|++.|.
T Consensus       202 ~~~~~~~~~-~~-~~~~----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~  252 (260)
T cd05611         202 FDNILSRRI-NW-PEEV----KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHP  252 (260)
T ss_pred             HHHHHhccc-CC-CCcc----cccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcCh
Confidence            111111110 00 0000    11123468899999999999999966   4665553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=5.3e-13  Score=101.57  Aligned_cols=107  Identities=25%  Similarity=0.297  Sum_probs=77.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++...  .......++|||+-|+|||++...+|+..+|.|++||+ +|++.|+.||...   +...+...+
T Consensus       488 HiKi~DFGmcKEni--~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe---DE~elF~aI  562 (683)
T KOG0696|consen  488 HIKIADFGMCKENI--FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE---DEDELFQAI  562 (683)
T ss_pred             ceEeeecccccccc--cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHH
Confidence            78999999998532  33444567899999999999999999999999999997 8999999997432   222222111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM  127 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~  127 (181)
                          .+..          -.++...+.+..++....+...|.+|..+
T Consensus       563 ----~ehn----------vsyPKslSkEAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  563 ----MEHN----------VSYPKSLSKEAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             ----HHcc----------CcCcccccHHHHHHHHHHhhcCCccccCC
Confidence                1111          12233344578888899999999999765

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.35  E-value=2.4e-12  Score=98.21  Aligned_cols=121  Identities=17%  Similarity=0.176  Sum_probs=72.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||++........ .......|+..|+|||++.     ...++.++|+||+||+ +++++|+.||...      .
T Consensus       140 ~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~------~  212 (332)
T cd05623         140 HIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE------S  212 (332)
T ss_pred             CEEEeecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC------C
Confidence            579999999875432211 1122347899999999886     2457789999999987 8999999987421      1


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCC--CCCCCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED--PARRPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d--p~~Rpt~~evl~~L~  135 (181)
                      ....................      ......++.+++.+|+..+  +..|+++.++++|-.
T Consensus       213 ~~~~~~~i~~~~~~~~~p~~------~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~  268 (332)
T cd05623         213 LVETYGKIMNHKERFQFPAQ------VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF  268 (332)
T ss_pred             HHHHHHHHhCCCccccCCCc------cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence            11111111111110111100      0112345777888877544  344789999999943

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=1.3e-12  Score=97.22  Aligned_cols=113  Identities=21%  Similarity=0.306  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCC-CCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK-DGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~-~~~~~~~~   79 (181)
                      ++|++|||+++.-.  .+.....++|||+.|+|||++++..|+..+|.|++||+ ++|+.|+.||...... ...+...+
T Consensus       389 hikltdygmcke~l--~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedy  466 (593)
T KOG0695|consen  389 HIKLTDYGMCKEGL--GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDY  466 (593)
T ss_pred             ceeecccchhhcCC--CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHH
Confidence            68999999998533  33444567899999999999999999999999999998 8999999998654322 22333333


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS  126 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt  126 (181)
                      ....+.+..+ .+         +...+.....+++..|.+||+.|..
T Consensus       467 lfqvilekqi-ri---------prslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  467 LFQVILEKQI-RI---------PRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHHHHhhhcc-cc---------cceeehhhHHHHHHhhcCCcHHhcC
Confidence            3333332221 11         1222234567888899999999975

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.35  E-value=9.9e-13  Score=96.60  Aligned_cols=115  Identities=23%  Similarity=0.166  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++|+|||++.......   ......|+..|++||.+....++.++|+|++|++ +++++|..|+......   ..... 
T Consensus       138 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~-  210 (258)
T cd05578         138 HVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQI-  210 (258)
T ss_pred             CEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHH-
Confidence            57899999987543221   1223467788999999988778899999999987 8999999887432211   11111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH--HHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM--SSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~--~evl~~  133 (181)
                      ......  ...        ..+......+.+++.+||+.||.+||++  .|++.|
T Consensus       211 ~~~~~~--~~~--------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         211 RAKQET--ADV--------LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             HHHhcc--ccc--------cCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence            111110  000        1111122568899999999999999999  777654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.35  E-value=7.7e-13  Score=98.28  Aligned_cols=128  Identities=21%  Similarity=0.178  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...-.  ........+|.+|.|||++.+. .|+..+|+||+||+ .|+++++..|+...+   ......
T Consensus       158 ~lKlaDFGlAra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~  232 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFR  232 (323)
T ss_pred             cEeeeccchHHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHH
Confidence            5799999999854311  1112345788999999999876 58999999999998 799988776643322   222222


Q ss_pred             HHHHHhcCCcccccCc------c--cc-----cCCcHHH---HHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDP------V--LK-----QSCVGAE---LLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~------~--~~-----~~~~~~~---~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      +...........+..-      .  ..     .......   .....+++.+|++.+|.+|.|+...+.|-
T Consensus       233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~  303 (323)
T KOG0594|consen  233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP  303 (323)
T ss_pred             HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence            2222222211111110      0  00     0000000   13578899999999999999999999983

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.35  E-value=9e-13  Score=100.53  Aligned_cols=131  Identities=21%  Similarity=0.180  Sum_probs=76.7

Q ss_pred             CceeeceecceeecCCCCc--ccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++........  .......|+..|++||.+.+ ..++.++|+|++|++ +++++|..|+....   .....
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~---~~~~~  219 (332)
T cd07857         143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD---YVDQL  219 (332)
T ss_pred             CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC---HHHHH
Confidence            5799999999764322111  11223468889999998765 457889999999987 88998887763211   00010


Q ss_pred             HHHHHHHh-----------cCCcc-------cccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLWC-----------EGEAL-------ELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~-----------~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........           .....       ......+.. ........+.+++.+||+.||++|||+.+++.|-.-
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~  295 (332)
T cd07857         220 NQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL  295 (332)
T ss_pred             HHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence            00000000           00000       000000000 000113467889999999999999999999988543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.35  E-value=1.3e-12  Score=99.51  Aligned_cols=103  Identities=22%  Similarity=0.305  Sum_probs=63.9

Q ss_pred             ccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccC---------
Q 041917           27 VGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMD---------   94 (181)
Q Consensus        27 ~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   94 (181)
                      .++..|+|||++.+  ..++.++||||+||+ +++++|..|+.......  ..    ..... ......++         
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~----~~~~~-~~~~~~~~~~~~~~~~~  241 (327)
T cd08227         169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--ML----LEKLN-GTVPCLLDTTTIPAEEL  241 (327)
T ss_pred             cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HH----HHHhc-CCccccccccchhhhhc
Confidence            45667999999875  357889999999987 89999999874221100  00    00000 00000000         


Q ss_pred             -----------------------cc----cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           95 -----------------------PV----LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        95 -----------------------~~----~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                                             +.    ............+.+++.+||+.||++|||+.+|++|..-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f  310 (327)
T cd08227         242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  310 (327)
T ss_pred             ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence                                   00    0000111223468899999999999999999999988543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.35  E-value=2.1e-12  Score=96.61  Aligned_cols=112  Identities=21%  Similarity=0.217  Sum_probs=76.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....++..|++||.+.+..++.++|+|++|++ +++++|..|+....      . ...
T Consensus       139 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~-~~~  206 (290)
T cd05580         139 YIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN------P-IQI  206 (290)
T ss_pred             CEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------H-HHH
Confidence            4799999998765322     223467889999999887778889999999987 89999998864221      1 111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ......... .+     .    ......+.+++.+||..||.+|+     ++.+++.|..
T Consensus       207 ~~~~~~~~~-~~-----~----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~  256 (290)
T cd05580         207 YEKILEGKV-RF-----P----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW  256 (290)
T ss_pred             HHHHhcCCc-cC-----C----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence            111111111 11     1    11124678899999999999999     8889987754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.34  E-value=1.7e-12  Score=96.95  Aligned_cols=121  Identities=20%  Similarity=0.263  Sum_probs=75.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++....... .......|+..|++||.+.+..  .+.++|+|++|++ +++++|..|+......  .....
T Consensus       143 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~  219 (288)
T cd05583         143 HVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSE  219 (288)
T ss_pred             CEEEEECccccccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHH
Confidence            478999999875432211 1122346788999999986654  6788999999987 8999999887422111  11111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ........      +..    +......+.+++.+||+.||+.|||+.+|.+.|+.
T Consensus       220 ~-~~~~~~~~------~~~----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         220 I-SRRILKSK------PPF----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             H-HHHHHccC------CCC----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            1 11111110      001    11122357889999999999999998776655543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.34  E-value=1e-12  Score=97.62  Aligned_cols=118  Identities=25%  Similarity=0.265  Sum_probs=75.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......++..|++||.+.+..++.++|+|++|++ +++++|+.|+.......  . ....
T Consensus       133 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~-~~~~  206 (277)
T cd05577         133 NVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV--E-KEEL  206 (277)
T ss_pred             CEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc--c-HHHH
Confidence            47899999887543211   1122356778999999888778889999999987 89999998874322110  0 0000


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      .....     .. ..    ..+......+.+++.+||+.+|.+||     ++.+++.|..
T Consensus       207 ~~~~~-----~~-~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~  256 (277)
T cd05577         207 KRRTL-----EM-AV----EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPL  256 (277)
T ss_pred             Hhccc-----cc-cc----cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChh
Confidence            00000     00 00    01111234678899999999999999     7888887643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.34  E-value=6.1e-13  Score=111.61  Aligned_cols=122  Identities=21%  Similarity=0.245  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCC----------------cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCC
Q 041917            2 NPKISDFGMARIFGGNQN----------------EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRN   64 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~----------------~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~   64 (181)
                      .+||+|||+++.......                ........|+..|+|||.+.+..++.++||||+||+ +++++|..|
T Consensus       151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            578999999976521100                001123468999999999988889999999999987 899999988


Q ss_pred             CCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhcC
Q 041917           65 SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-SMSSVVVMLASD  137 (181)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-t~~evl~~L~~~  137 (181)
                      +....   .....   ..... ...... .+      .......+.+++.+||+.||++|+ ++.++++.|+..
T Consensus       231 F~~~~---~~ki~---~~~~i-~~P~~~-~p------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        231 YRRKK---GRKIS---YRDVI-LSPIEV-AP------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             CCCcc---hhhhh---hhhhc-cChhhc-cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            74311   11110   00000 000000 00      011123577899999999999996 556666666654

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.34  E-value=1.5e-12  Score=100.36  Aligned_cols=96  Identities=23%  Similarity=0.178  Sum_probs=61.4

Q ss_pred             cccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHH
Q 041917           26 VVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA  104 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (181)
                      .+|+..|+|||++.+..++.++|+||+||+ +++++|..||.....      ...............+. +.    .  .
T Consensus       196 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~------~~~~~~i~~~~~~~~~p-~~----~--~  262 (360)
T cd05627         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP------QETYRKVMNWKETLVFP-PE----V--P  262 (360)
T ss_pred             cCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH------HHHHHHHHcCCCceecC-CC----C--C
Confidence            478999999999998889999999999987 899999998743211      11111111101001111 10    0  0


Q ss_pred             HHHHHHHHHHhhccCCCCCCCC---HHHHHHHhh
Q 041917          105 ELLKYIHIGLLCVQEDPARRPS---MSSVVVMLA  135 (181)
Q Consensus       105 ~~~~~~~l~~~cl~~dp~~Rpt---~~evl~~L~  135 (181)
                      ...++.+++.+++ .||++|++   +.+++.|-.
T Consensus       263 ~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~  295 (360)
T cd05627         263 ISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPF  295 (360)
T ss_pred             CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCC
Confidence            1235666777766 49999984   789998854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=2.3e-12  Score=94.14  Aligned_cols=114  Identities=23%  Similarity=0.328  Sum_probs=76.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.........  .....++..|++||......++.++|+|++|++ +++++|..|+....      .....
T Consensus       137 ~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~------~~~~~  208 (254)
T cd06627         137 VVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN------PMAAL  208 (254)
T ss_pred             CEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc------HHHHH
Confidence            5799999999865432221  223467888999999877778889999999987 89999988764211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .... ...... +.        ......+.+++.+||..+|++||++.+++.+
T Consensus       209 ~~~~-~~~~~~-~~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         209 FRIV-QDDHPP-LP--------EGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             HHHh-ccCCCC-CC--------CCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            1111 111111 11        1112467889999999999999999999865

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.33  E-value=4.8e-13  Score=96.41  Aligned_cols=121  Identities=21%  Similarity=0.261  Sum_probs=79.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||||||.+-.+.   +....+.-.|...|||||.+..  ..|+.++|+||+|+. +|+.+|.-|+..+..     +.+
T Consensus       206 ~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfe  277 (361)
T KOG1006|consen  206 DVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFE  277 (361)
T ss_pred             CEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHH
Confidence            47999999986442   2222223468888999999863  458999999999986 899999988643211     111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. +....++...+..+    .........+..++..|+.+|..+||...+++++-.
T Consensus       278 ql-~~Vv~gdpp~l~~~----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~f  329 (361)
T KOG1006|consen  278 QL-CQVVIGDPPILLFD----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPF  329 (361)
T ss_pred             HH-HHHHcCCCCeecCc----ccccccCHHHHHHHHHHhhcccccCcchhhhhcCch
Confidence            11 11112222111111    112234557899999999999999999999987743

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.33  E-value=1.5e-11  Score=93.87  Aligned_cols=121  Identities=17%  Similarity=0.197  Sum_probs=73.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........ ......|+..|+|||.+.+     ..++.++|+||+|++ +++++|+.|+...      .
T Consensus       140 ~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~------~  212 (331)
T cd05624         140 HIRLADFGSCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE------S  212 (331)
T ss_pred             CEEEEeccceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC------C
Confidence            5799999999765322211 1123468999999998865     457788999999987 8999999987421      1


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPAR--RPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~evl~~L~  135 (181)
                      ................+. ...     .....++.+++.+|+..++++  |+++.+++.|..
T Consensus       213 ~~~~~~~i~~~~~~~~~p-~~~-----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~  268 (331)
T cd05624         213 LVETYGKIMNHEERFQFP-SHI-----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF  268 (331)
T ss_pred             HHHHHHHHHcCCCcccCC-Ccc-----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence            111111111111101111 100     112345778888888765544  568999998854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.32  E-value=8.2e-13  Score=100.81  Aligned_cols=133  Identities=21%  Similarity=0.186  Sum_probs=77.6

Q ss_pred             CceeeceecceeecCCC------------CcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQ------------NEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~------------~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      .+||+|||++.......            .........++..|++||.+.+. .++.++|+|++|++ +++++|..|+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            47899999987653111            00111123457789999998654 36788999999987 899999887643


Q ss_pred             CcCCCCcchHHHHHHHHhcCCccccc-----------Ccccc---cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           68 YLSKDGHSLLTYTWKLWCEGEALELM-----------DPVLK---QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ...   ..................+.           .....   ..........+.+++.+||+.+|++||++.+|+.|
T Consensus       237 ~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        237 ENE---IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             CCH---HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            211   11111111111000000000           00000   00011123467899999999999999999999998


Q ss_pred             hhcC
Q 041917          134 LASD  137 (181)
Q Consensus       134 L~~~  137 (181)
                      ....
T Consensus       314 ~~~~  317 (335)
T PTZ00024        314 EYFK  317 (335)
T ss_pred             cccC
Confidence            6654

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=7.5e-13  Score=97.66  Aligned_cols=117  Identities=21%  Similarity=0.217  Sum_probs=76.1

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .++|+|||+++....... ........++..|++||.+.+..++.++|+|++|++ +++++|..|+...      .....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~  217 (264)
T cd06653         144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY------EAMAA  217 (264)
T ss_pred             CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc------CHHHH
Confidence            478999999875432111 111123467888999999988778899999999987 8999999886321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........ .    .+    ..+.....++.+++.+||.. +..||++.+++.|.
T Consensus       218 ~~~~~~~~-~----~~----~~p~~~~~~~~~~i~~~l~~-~~~r~~~~~~~~~~  262 (264)
T cd06653         218 IFKIATQP-T----KP----MLPDGVSDACRDFLKQIFVE-EKRRPTAEFLLRHP  262 (264)
T ss_pred             HHHHHcCC-C----CC----CCCcccCHHHHHHHHHHhcC-cccCccHHHHhcCC
Confidence            11111111 0    11    11222334688899999994 79999999998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.32  E-value=2.7e-12  Score=98.49  Aligned_cols=128  Identities=16%  Similarity=0.116  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....     ......++..|+|||.+.+ ..++.++|+|++|++ +++++|+.|+......  ......
T Consensus       158 ~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~--~~~~~~  230 (345)
T cd07877         158 ELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLI  230 (345)
T ss_pred             CEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence            579999999875321     1123467888999998765 457788999999987 8999998886421110  000000


Q ss_pred             HHHHH----------hcCC-------cccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLW----------CEGE-------ALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .....          ....       .......... .........+.+++.+|++.||.+||++.+++.|-.-.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~  304 (345)
T cd07877         231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA  304 (345)
T ss_pred             HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence            00000          0000       0000000000 00001234578999999999999999999999986543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.31  E-value=5.6e-12  Score=96.03  Aligned_cols=102  Identities=21%  Similarity=0.328  Sum_probs=63.7

Q ss_pred             cCCCccCccccccC--ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCC----------------
Q 041917           28 GTYGYMAPEYAMEG--VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGE----------------   88 (181)
Q Consensus        28 g~~~~~aPe~~~~~--~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   88 (181)
                      ++..|++||.+.+.  .++.++|+|++|++ +++++|..|+......     ... ........                
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-----QML-LQKLKGPPYSPLDITTFPCEESRM  243 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-----HHH-HHHhcCCCCCCccccccchhhhhh
Confidence            45569999998763  46788999999987 8999999887432110     000 00000000                


Q ss_pred             ---------------cc-----cccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           89 ---------------AL-----ELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        89 ---------------~~-----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                                     ..     ......+...........+.+++.+||..||++|||+.|+++|..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~  310 (328)
T cd08226         244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF  310 (328)
T ss_pred             ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence                           00     000001111112334567899999999999999999999998854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.31  E-value=8.2e-13  Score=100.05  Aligned_cols=112  Identities=18%  Similarity=0.187  Sum_probs=76.9

Q ss_pred             cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccC
Q 041917           22 NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQS  100 (181)
Q Consensus        22 ~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (181)
                      ...+++||.-|+|||++.+...+.++|.|+||++ +||+.|..||-.   ........    +..... ..+++      
T Consensus       291 RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG---~~~~~Tl~----NIv~~~-l~Fp~------  356 (459)
T KOG0610|consen  291 RSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKG---SNNKETLR----NIVGQP-LKFPE------  356 (459)
T ss_pred             cccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCC---CCchhhHH----HHhcCC-CcCCC------
Confidence            3456899999999999999999999999999987 999999999732   22211111    111111 11111      


Q ss_pred             CcHHHHHHHHHHHHhhccCCCCCCCC----HHHHHHHh--hcCCCCCCCCCCCC
Q 041917          101 CVGAELLKYIHIGLLCVQEDPARRPS----MSSVVVML--ASDTITLPPPTQPA  148 (181)
Q Consensus       101 ~~~~~~~~~~~l~~~cl~~dp~~Rpt----~~evl~~L--~~~~~~~~~~~~~~  148 (181)
                       .......+.+|+++.|.+||++|..    +.||.+|-  +.+.+.+-....||
T Consensus       357 -~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP  409 (459)
T KOG0610|consen  357 -EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPP  409 (459)
T ss_pred             -CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCC
Confidence             1123346889999999999999999    99999995  45555543333333

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.31  E-value=3.2e-12  Score=107.57  Aligned_cols=117  Identities=25%  Similarity=0.406  Sum_probs=74.2

Q ss_pred             Cceeeceecceeec----------------CCCCcccccccccCCCccCccccccC---ccCcccceeehhHH-HHHHhc
Q 041917            2 NPKISDFGMARIFG----------------GNQNEANTNRVVGTYGYMAPEYAMEG---VFSIKSDVFSFGVL-LEIVSG   61 (181)
Q Consensus         2 ~~ki~dfgl~~~~~----------------~~~~~~~~~~~~g~~~~~aPe~~~~~---~~~~~~diws~gv~-~~~~~g   61 (181)
                      .|||+|||++....                ........++.+||..|+|||++.+.   .|+.|+|+||+|++ +||+. 
T Consensus       735 ~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y-  813 (1351)
T KOG1035|consen  735 SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY-  813 (1351)
T ss_pred             CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc-
Confidence            58999999997621                01112234567899999999998754   49999999999987 78864 


Q ss_pred             CCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           62 KRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                        ||..  .++-..+    ......+.+.   .+   ..........-.++++.+++.||.+||||.|+|..
T Consensus       814 --PF~T--sMERa~i----L~~LR~g~iP---~~---~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  814 --PFGT--SMERASI----LTNLRKGSIP---EP---ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             --cCCc--hHHHHHH----HHhcccCCCC---CC---cccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence              3321  1111111    1111122111   11   11222333456788899999999999999999864

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.31  E-value=1e-12  Score=96.47  Aligned_cols=117  Identities=21%  Similarity=0.239  Sum_probs=74.0

Q ss_pred             CceeeceecceeecCCCC------cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc
Q 041917            2 NPKISDFGMARIFGGNQN------EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~------~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~   74 (181)
                      .+||+|||++........      ........++..|++||......++.++|+|++|++ +++++|..|+....     
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----  205 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----  205 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----
Confidence            478999999875432211      011223457788999999888778889999999987 89999988863211     


Q ss_pred             chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH---HHHHHH
Q 041917           75 SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM---SSVVVM  133 (181)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~---~evl~~  133 (181)
                       ..... ....... ......     .  .....+..++.+||+.+|++|||+   .+++.|
T Consensus       206 -~~~~~-~~~~~~~-~~~~~~-----~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         206 -PEEIF-QNILNGK-IEWPED-----V--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             -HHHHH-HHHhcCC-cCCCcc-----c--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence             11111 1111111 111100     0  013467899999999999999999   555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.29  E-value=9.9e-12  Score=89.76  Aligned_cols=116  Identities=24%  Similarity=0.281  Sum_probs=75.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +++|+|||.+.......   ......+...|++||......++.++|+|++|++ +++++|..|+...  ......    
T Consensus       125 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~--~~~~~~----  195 (244)
T smart00220      125 HVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD--DQLLEL----  195 (244)
T ss_pred             cEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CcHHHH----
Confidence            57899999987654321   1223457778999999887778889999999986 8999998776321  111111    


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ......... ......      .....++.+++.+||..+|++||++.+++++
T Consensus       196 ~~~~~~~~~-~~~~~~------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      196 FKKIGKPKP-PFPPPE------WKISPEAKDLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             HHHHhccCC-CCcccc------ccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence            111111100 000000      0022368889999999999999999999975

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.29  E-value=6.4e-12  Score=91.71  Aligned_cols=113  Identities=24%  Similarity=0.274  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +++|+|||++........  ......++..|++||...+...+.++|+|++|++ +++++|..|+....   .   ....
T Consensus       131 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~---~---~~~~  202 (250)
T cd05123         131 HIKLTDFGLAKELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED---R---KEIY  202 (250)
T ss_pred             cEEEeecCcceecccCCC--cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---H---HHHH
Confidence            478999999876533221  1223467788999999988778889999999987 89999998873221   1   1111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH---HHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM---SSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~---~evl~~  133 (181)
                      ... ... ... +        +......+.+++.+||..||+.||++   .+++.|
T Consensus       203 ~~~-~~~-~~~-~--------~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~  247 (250)
T cd05123         203 EKI-LKD-PLR-F--------PEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH  247 (250)
T ss_pred             HHH-hcC-CCC-C--------CCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence            111 110 001 1        11113467889999999999999999   666665

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.29  E-value=2.2e-12  Score=98.37  Aligned_cols=127  Identities=22%  Similarity=0.255  Sum_probs=75.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++.....     ......++..|++||.+.+ ..++.++|+|++|++ +++++|..++.....   ......
T Consensus       146 ~~~l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~---~~~~~~  217 (328)
T cd07856         146 DLKICDFGLARIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH---VNQFSI  217 (328)
T ss_pred             CEEeCccccccccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            578999999874321     1122356778999998765 557889999999987 899999887643211   000000


Q ss_pred             HHHHH-----------hcCCcccccCcc-cccCCcH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLW-----------CEGEALELMDPV-LKQSCVG-----AELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~-----------~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .....           ........+... .....+.     .....+.+++.+||+.+|++||++.+|+.|-.-
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~  291 (328)
T cd07856         218 ITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL  291 (328)
T ss_pred             HHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence            00000           000000000000 0000010     123468899999999999999999999988543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.29  E-value=1.9e-12  Score=94.23  Aligned_cols=106  Identities=14%  Similarity=0.045  Sum_probs=69.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .++++|||.+......     .....++..|++||......++.++|+|++|++ +++++|..++......         
T Consensus       123 ~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------  188 (237)
T cd05576         123 HIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------  188 (237)
T ss_pred             CEEEecccchhccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------
Confidence            4689999987644221     112345667999999887778889999999987 8999998664211000         


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVM  133 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~  133 (181)
                         .....     .    ...+......+.+++.+||+.||++|+++     .+++.|
T Consensus       189 ---~~~~~-----~----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  234 (237)
T cd05576         189 ---INTHT-----T----LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH  234 (237)
T ss_pred             ---ccccc-----c----cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence               00000     0    01111223467889999999999999997     555544

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.29  E-value=2.3e-12  Score=95.90  Aligned_cols=127  Identities=23%  Similarity=0.257  Sum_probs=73.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......++..|++||.+.+. .++.++|+|++|++ +++++|..|+....   .......
T Consensus       138 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~---~~~~~~~  212 (284)
T cd07836         138 ELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN---NEDQLLK  212 (284)
T ss_pred             cEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---cHHHHHH
Confidence            578999999875422111  11223567789999987653 46788999999987 89999988764321   1111111


Q ss_pred             HHHHHhcCC--------cccccCcccc-------cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           80 TWKLWCEGE--------ALELMDPVLK-------QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        80 ~~~~~~~~~--------~~~~~~~~~~-------~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .........        ..........       ..........+.+++.+||+.||.+||++.+|+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         213 IFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             HHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            100000000        0000000000       00011123457889999999999999999999976

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.25  E-value=6e-12  Score=92.67  Aligned_cols=139  Identities=17%  Similarity=0.152  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCC-CCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCC---c-
Q 041917            2 NPKISDFGMARIFGGN-QNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG---H-   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~-~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~---~-   74 (181)
                      .|||+|||+++..... ........++-|++|.|||.+.+.. |+.+.|+|++||+ -|+++-...|.....+..   . 
T Consensus       174 ~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pf  253 (438)
T KOG0666|consen  174 RVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPF  253 (438)
T ss_pred             eeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCc
Confidence            5899999999976432 1111222346688999999998765 8888999999999 577766544432221111   0 


Q ss_pred             --chHHHHHHHHhcCCccccc------Cc-----ccc-cCCcHH-----------HHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           75 --SLLTYTWKLWCEGEALELM------DP-----VLK-QSCVGA-----------ELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        75 --~~~~~~~~~~~~~~~~~~~------~~-----~~~-~~~~~~-----------~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                        +.+.-+.+.........++      +-     ..+ ..+...           ......+|+.++|..||.+|.|+.+
T Consensus       254 q~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~q  333 (438)
T KOG0666|consen  254 QHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQ  333 (438)
T ss_pred             hHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHH
Confidence              0111111111111111111      00     000 000000           0113688999999999999999999


Q ss_pred             HHHHhhcCCCC
Q 041917          130 VVVMLASDTIT  140 (181)
Q Consensus       130 vl~~L~~~~~~  140 (181)
                      .++|.-...-.
T Consensus       334 Aleh~yF~~d~  344 (438)
T KOG0666|consen  334 ALEHPYFTEDP  344 (438)
T ss_pred             HhcccccccCC
Confidence            99987654333

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.24  E-value=4.2e-12  Score=100.18  Aligned_cols=115  Identities=23%  Similarity=0.249  Sum_probs=81.4

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      +++||+|||++-.+.   ......++||++.|.|||+..+..|. ..+|+|++|++ +.++.|.-||...      .+  
T Consensus       192 mnikIaDfgfS~~~~---~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~------~l--  260 (596)
T KOG0586|consen  192 MNIKIADFGFSTFFD---YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ------NL--  260 (596)
T ss_pred             cceeeeccccceeec---ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc------cc--
Confidence            368999999998764   22334567999999999999998876 66999999987 7889999887421      11  


Q ss_pred             HHHHHHhcCCcccccCcccccC--CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQS--CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                                 ..+-++.+.+.  .+.-...++-+++++++-.+|.+|+++.++.++-+..
T Consensus       261 -----------k~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n  310 (596)
T KOG0586|consen  261 -----------KELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRN  310 (596)
T ss_pred             -----------ccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccc
Confidence                       11111111111  1111123577888999999999999999999886543

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=7.9e-12  Score=95.60  Aligned_cols=131  Identities=22%  Similarity=0.258  Sum_probs=83.0

Q ss_pred             ceeeceecceeecCCCCc--ccccccccCCCccCccccccC----ccC--cccceeehhHH-HHHHhcCC----------
Q 041917            3 PKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAMEG----VFS--IKSDVFSFGVL-LEIVSGKR----------   63 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~~----~~~--~~~diws~gv~-~~~~~g~~----------   63 (181)
                      .-|+|+||+-......+.  ...+..+||..|||||++...    .|.  ..+|||+||.+ ||+.....          
T Consensus       355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~  434 (513)
T KOG2052|consen  355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL  434 (513)
T ss_pred             EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence            459999999765443222  223456899999999998532    232  44999999976 87754322          


Q ss_pred             CCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           64 NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVG-AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ||....+.+  .-.+.    ..+.-+.+.+.|.+...+.. .....+.++|+.||..+|..|.|+-.|.+.|.++..
T Consensus       435 Pyyd~Vp~D--Ps~ee----MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  435 PYYDVVPSD--PSFEE----MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CcccCCCCC--CCHHH----HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            222111111  11111    11222333444555444433 456678999999999999999999999999988764

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.22  E-value=1.5e-11  Score=91.88  Aligned_cols=119  Identities=21%  Similarity=0.245  Sum_probs=74.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC--ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG--VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~--~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||++....... ........|+..|++||.+...  .++.++|+|++|++ +++++|..|+.....  ......
T Consensus       143 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~  219 (290)
T cd05613         143 HVVLTDFGLSKEFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE--KNSQAE  219 (290)
T ss_pred             CEEEeeCccceeccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc--cccHHH
Confidence            57999999987543211 1112235678899999998653  35678999999987 899999988642111  111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVML  134 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L  134 (181)
                      ... ......      +.    .+......+.+++.+||+.||++||     ++.+++.|-
T Consensus       220 ~~~-~~~~~~------~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~  269 (290)
T cd05613         220 ISR-RILKSE------PP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHP  269 (290)
T ss_pred             HHH-HhhccC------CC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCc
Confidence            111 111100      00    1111223577899999999999997     788888773

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.22  E-value=2e-11  Score=93.64  Aligned_cols=128  Identities=20%  Similarity=0.145  Sum_probs=74.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......     .....++..|++||.+.+ ..++.++|+|++|++ +++++|..|+.....  .......
T Consensus       156 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~--~~~~~~~  228 (343)
T cd07880         156 ELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH--LDQLMEI  228 (343)
T ss_pred             CEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence            4799999998754211     123456788999998865 347788999999987 899999888642110  0000000


Q ss_pred             HH----------HHHhcCCcccccC---ccccc---CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TW----------KLWCEGEALELMD---PVLKQ---SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~----------~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..          ...........+.   .....   .........+.+++.+|++.||++|||+.+++.|-..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~  301 (343)
T cd07880         229 MKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF  301 (343)
T ss_pred             HHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccH
Confidence            00          0000000000000   00000   0001122357899999999999999999999987543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.16  E-value=5.4e-12  Score=98.44  Aligned_cols=131  Identities=17%  Similarity=0.110  Sum_probs=80.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||||||.|......   . .+.+.-+.+|.|||++.+..|+...|+||+||. |++.+|+..|+.....+...+....
T Consensus       575 iLKLCDfGSA~~~~en---e-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~  650 (752)
T KOG0670|consen  575 ILKLCDFGSASFASEN---E-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMEL  650 (752)
T ss_pred             eeeeccCccccccccc---c-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHh
Confidence            4799999998765321   1 112344678999999999999999999999985 8999998877543211110110000


Q ss_pred             H----------HHHhcCC----------------------cccccCcc------ccc--CCc---HHHHHHHHHHHHhhc
Q 041917           81 W----------KLWCEGE----------------------ALELMDPV------LKQ--SCV---GAELLKYIHIGLLCV  117 (181)
Q Consensus        81 ~----------~~~~~~~----------------------~~~~~~~~------~~~--~~~---~~~~~~~~~l~~~cl  117 (181)
                      .          ..+....                      +...+.|.      +..  ..+   ......+.+|+..|+
T Consensus       651 KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml  730 (752)
T KOG0670|consen  651 KGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKML  730 (752)
T ss_pred             cCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHh
Confidence            0          0000000                      00011110      000  011   233456889999999


Q ss_pred             cCCCCCCCCHHHHHHHhhc
Q 041917          118 QEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus       118 ~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..||++|.|..|.|.|..-
T Consensus       731 ~LdP~KRit~nqAL~HpFi  749 (752)
T KOG0670|consen  731 ILDPEKRITVNQALKHPFI  749 (752)
T ss_pred             ccChhhcCCHHHHhcCCcc
Confidence            9999999999999998643

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=1.3e-11  Score=89.53  Aligned_cols=140  Identities=21%  Similarity=0.221  Sum_probs=81.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH-
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT-   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~-   78 (181)
                      .+||||||+++....+...... ...-|-.|.|||.+.+.. |+..+||||.||+ -|++..+..|....+-....+.. 
T Consensus       194 vLKICDFGLARvee~d~~~hMT-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItd  272 (449)
T KOG0664|consen  194 ILKICDFGLARTWDQRDRLNMT-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIID  272 (449)
T ss_pred             eEEecccccccccchhhhhhhH-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHH
Confidence            3699999999865433222222 234466799999998754 8999999999998 56666555543221111111100 


Q ss_pred             -------HHHHHHhcCCcccccCcccc---------cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           79 -------YTWKLWCEGEALELMDPVLK---------QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        79 -------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                             ......+++.-..+++...+         ...+...-.+...++..++..||..|.+..+.+.|+.....++.
T Consensus       273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r  352 (449)
T KOG0664|consen  273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLR  352 (449)
T ss_pred             HhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccccee
Confidence                   01111222221122221111         11122333456778888999999999999999999876555543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.12  E-value=2.5e-11  Score=89.75  Aligned_cols=128  Identities=20%  Similarity=0.130  Sum_probs=80.7

Q ss_pred             ceeeceecceeecCCCCccc-----ccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCC
Q 041917            3 PKISDFGMARIFGGNQNEAN-----TNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK   71 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~-----~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~   71 (181)
                      +|||||.+........+...     ..+.+|+..|||||++.     ...|+.+.|.||+||+ +-|+.|..||...=+.
T Consensus       218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~  297 (463)
T KOG0607|consen  218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA  297 (463)
T ss_pred             eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence            79999998876543333221     23568999999999874     3458889999999988 6778899888432111


Q ss_pred             --------CCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           72 --------DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        72 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                              .....++...+.+.++. .++++.     .....+.+..+++...+.+|+.+|.++.+++.|.+-
T Consensus       298 dCGWdrGe~Cr~CQ~~LFesIQEGk-YeFPdk-----dWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~  364 (463)
T KOG0607|consen  298 DCGWDRGEVCRVCQNKLFESIQEGK-YEFPDK-----DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV  364 (463)
T ss_pred             cCCccCCCccHHHHHHHHHHHhccC-CcCChh-----hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence                    11112222222222111 122221     111223356778888899999999999999997653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.12  E-value=8.3e-12  Score=97.74  Aligned_cols=116  Identities=24%  Similarity=0.232  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||||||+++....   .....+..||+.|+|||+++.+.|+...|.||+||+ +--+.|.-||.-     ..++.+.+
T Consensus       705 QvKlCDFGfARiIgE---ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE-----dEdIndQI  776 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGE---KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE-----DEDINDQI  776 (888)
T ss_pred             ceeeccccceeecch---hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC-----ccchhHHh
Confidence            589999999998743   233456799999999999999999999999999987 666888877631     11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .    .   ..++-|.-   -..+...+.++++...|+.+-.+|-+..+-+.|.+
T Consensus       777 Q----N---AaFMyPp~---PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W  821 (888)
T KOG4236|consen  777 Q----N---AAFMYPPN---PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW  821 (888)
T ss_pred             h----c---cccccCCC---chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence            0    0   01111100   01122346789999999999999999999887754

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=4.7e-11  Score=85.79  Aligned_cols=133  Identities=17%  Similarity=0.136  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCCCccc--ccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEAN--TNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~--~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+++.+........  .+...-|.+|.+||.+.+ ..|+.+.|+|..||+ -++.++...+.....   ....
T Consensus       162 ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte---qqql  238 (376)
T KOG0669|consen  162 ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE---QQQL  238 (376)
T ss_pred             eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH---HHHH
Confidence            478999999986543222211  112244789999999876 458899999999998 577777654422111   1111


Q ss_pred             HHHHHHHh-----------cCCccccc--CcccccCC--------cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLWC-----------EGEALELM--DPVLKQSC--------VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~-----------~~~~~~~~--~~~~~~~~--------~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .++.....           .-.+...+  +|..++..        +...-.+..+++..++..||.+|+++.+++.|...
T Consensus       239 ~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F  318 (376)
T KOG0669|consen  239 HLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF  318 (376)
T ss_pred             HHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence            11111100           00000001  11000000        00111257889999999999999999999998765


Q ss_pred             C
Q 041917          137 D  137 (181)
Q Consensus       137 ~  137 (181)
                      .
T Consensus       319 ~  319 (376)
T KOG0669|consen  319 W  319 (376)
T ss_pred             h
Confidence            4

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.11  E-value=2.8e-11  Score=89.20  Aligned_cols=130  Identities=21%  Similarity=0.120  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcC----------
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS----------   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~----------   70 (181)
                      .+||.|||+++....   ....+....+..|.|||++.+..|...+||||+||+ -+++.|...|.+...          
T Consensus       156 ~lKi~dfg~ar~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~  232 (369)
T KOG0665|consen  156 TLKILDFGLARTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ  232 (369)
T ss_pred             heeeccchhhcccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence            479999999975321   123345677889999999999889999999999998 688888766542100          


Q ss_pred             --CCCcch--------HHHHHHHHh--cCCccccc-Cccccc--CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           71 --KDGHSL--------LTYTWKLWC--EGEALELM-DPVLKQ--SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        71 --~~~~~~--------~~~~~~~~~--~~~~~~~~-~~~~~~--~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                        ......        ..+......  .-.....+ |...+.  +........+.+++.+||-.+|++|.++.++|.|.
T Consensus       233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence              000000        000000000  00000000 111111  01112233467889999999999999999999995

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.07  E-value=2.8e-10  Score=89.68  Aligned_cols=134  Identities=16%  Similarity=0.237  Sum_probs=83.1

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCc-------cCcccceeehhHH-HHHHhcCCCCCCCcCCC
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-------FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD   72 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-------~~~~~diws~gv~-~~~~~g~~~~~~~~~~~   72 (181)
                      |.+||+|||+.................-...|.|||.++...       .+.+.||||+|++ .+++....|+.......
T Consensus        86 w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~  165 (484)
T KOG1023|consen   86 WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE  165 (484)
T ss_pred             EEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccC
Confidence            568999999987653211111111122345799999987632       3566999999988 78888888875432222


Q ss_pred             CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           73 GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ..  .+.... ... .....+.|.+....  ....++..++..||..+|..||++.+|-..+......
T Consensus       166 ~~--~eii~~-~~~-~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  166 DP--DEIILR-VKK-GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             Ch--HHHHHH-HHh-cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            22  111111 111 12233344433221  2223688999999999999999999999998876553

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.04  E-value=1.6e-10  Score=94.24  Aligned_cols=127  Identities=20%  Similarity=0.224  Sum_probs=81.2

Q ss_pred             CceeeceecceeecCCCCc--ccccccccCCCccCccccccCccCcc-cceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAMEGVFSIK-SDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~~~~~~~-~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||.+.........  .....++|+..|+|||++.+..|+.. +|||+.|++ ..|+.|+.|+-.........  
T Consensus       458 ~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--  535 (601)
T KOG0590|consen  458 ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--  535 (601)
T ss_pred             ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--
Confidence            5799999998865433222  34456789999999999999999866 999999987 67888888764332221111  


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                          ..............  ..............++.++|+.||.+|.|+.+|++.-+.
T Consensus       536 ----~~~~~~~~~~~~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~  588 (601)
T KOG0590|consen  536 ----KTNNYSDQRNIFEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWI  588 (601)
T ss_pred             ----hhhccccccccccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence                00000000000000  000111222356778899999999999999999976443

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.03  E-value=2.3e-10  Score=91.98  Aligned_cols=128  Identities=18%  Similarity=0.208  Sum_probs=78.8

Q ss_pred             eeeceecceeecCCCCcccccccccCCCccCccccc-cCccCcccceeehhHH-HHHHhcCCCCCCCcC-CCCcchHHHH
Q 041917            4 KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS-KDGHSLLTYT   80 (181)
Q Consensus         4 ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~-~~~~~~~~~~   80 (181)
                      ||+|||.|+.+..   .....++.||..|.+||... ++.|+..+|.|||||. ++.++|..||-.+.. +....+....
T Consensus       164 KLtDfG~Arel~d---~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~  240 (732)
T KOG4250|consen  164 KLTDFGAARELDD---NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHI  240 (732)
T ss_pred             eeecccccccCCC---CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhh
Confidence            8999999997643   33456789999999999988 5889999999999987 899999999844332 2222222221


Q ss_pred             HHHHhcCCcccccCcc----------cc--cCCcHHHHHHHHHHHHhhccCCCCCCC--CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPV----------LK--QSCVGAELLKYIHIGLLCVQEDPARRP--SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rp--t~~evl~~L~  135 (181)
                      ... ....+....++.          ++  ..........+-.++..+|.+++++|-  .+.+....+.
T Consensus       241 ~tk-kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~  308 (732)
T KOG4250|consen  241 ITK-KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVD  308 (732)
T ss_pred             hcc-CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHH
Confidence            111 111111111110          00  011223344566677778888888888  5544444433

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=4.3e-10  Score=94.60  Aligned_cols=119  Identities=21%  Similarity=0.229  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc----c-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM----E-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~----~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      |+||+|||.+-.+..+.. ......+||+-|++||++.    + +.|+..+|.||+||+ |+|+.|..||...      .
T Consensus       213 HikLADFGsClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------s  285 (1317)
T KOG0612|consen  213 HIKLADFGSCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------S  285 (1317)
T ss_pred             cEeeccchhHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------H
Confidence            789999999876643222 2234468999999999986    2 568899999999987 9999999998431      1


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS---MSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt---~~evl~~L~  135 (181)
                      ++.--.+.....+...+++.       ..-+.+..+|+.+.+. +|+.|..   +.++..|..
T Consensus       286 lveTY~KIm~hk~~l~FP~~-------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF  340 (1317)
T KOG0612|consen  286 LVETYGKIMNHKESLSFPDE-------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF  340 (1317)
T ss_pred             HHHHHHHHhchhhhcCCCcc-------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence            11111122222223333311       1123456677777664 6888888   999999965

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.96  E-value=2.8e-10  Score=79.55  Aligned_cols=64  Identities=30%  Similarity=0.427  Sum_probs=48.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc----cCccCcccceeehhHH-HHHHhcCCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFY   68 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~----~~~~~~~~diws~gv~-~~~~~g~~~~~~~   68 (181)
                      ++||||||.+-.+...   ...+--.|.-.|+|||.+.    +..|+.++||||+|+. .|+.+++.|+..+
T Consensus       187 qVKiCDFGIsG~L~dS---iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  187 QVKICDFGISGYLVDS---IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             cEEEcccccceeehhh---hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            6899999999766322   2122135777899999885    3469999999999985 8999999987543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.88  E-value=1e-09  Score=88.09  Aligned_cols=119  Identities=18%  Similarity=0.257  Sum_probs=75.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+|++|||.+....  ....+..++.|++.|||||+..   ...|...+|||+.|+. .++-.-..|. +.    .+...
T Consensus       150 DvklaDfgvsaqit--ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqppl-fd----lhpmr  222 (829)
T KOG0576|consen  150 DVKLADFGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPL-FD----LHPMR  222 (829)
T ss_pred             ceeecccCchhhhh--hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcc-cc----cchHH
Confidence            47999999876442  3445566789999999999863   4568899999999975 5554433332 11    01111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ...   ....   ..+++.. ......+...|..|++.|+-.+|++||++..++.|-
T Consensus       223 ~l~---LmTk---S~~qpp~-lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~  272 (829)
T KOG0576|consen  223 ALF---LMTK---SGFQPPT-LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHP  272 (829)
T ss_pred             HHH---Hhhc---cCCCCCc-ccCCccchHHHHHHHHHHhcCCCccCCChhhheece
Confidence            100   0111   1222211 122334455688899999999999999999987753

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.87  E-value=3.4e-09  Score=84.91  Aligned_cols=125  Identities=17%  Similarity=0.098  Sum_probs=68.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--------------------cC--cccceeehhHH-HHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--------------------FS--IKSDVFSFGVL-LEI   58 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--------------------~~--~~~diws~gv~-~~~   58 (181)
                      .+||+|||+++........ ......+++.|++||.+....                    |.  .+.|+||+||+ +++
T Consensus       347 ~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em  425 (507)
T PLN03224        347 QVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQM  425 (507)
T ss_pred             cEEEEeCcCccccccCCcc-CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHH
Confidence            5799999998754321111 111123467899999875321                    11  24699999987 888


Q ss_pred             HhcCC-CCCCCcCCC-----CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCC---CCCCCHHH
Q 041917           59 VSGKR-NSGFYLSKD-----GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP---ARRPSMSS  129 (181)
Q Consensus        59 ~~g~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp---~~Rpt~~e  129 (181)
                      +++.. ++.......     ....... +.......    .+    -..........++++.++|..++   .+|+|+.|
T Consensus       426 ~~~~l~p~~~~~~f~~~~~~~~~~~~~-~r~~~~~~----~~----~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e  496 (507)
T PLN03224        426 CVPELRPVANIRLFNTELRQYDNDLNR-WRMYKGQK----YD----FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQ  496 (507)
T ss_pred             HhCCCCCccchhhhhhHHhhccchHHH-HHhhcccC----CC----cccccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence            88764 332110000     0000000 00000000    00    00111223467888999998766   68999999


Q ss_pred             HHHHhhc
Q 041917          130 VVVMLAS  136 (181)
Q Consensus       130 vl~~L~~  136 (181)
                      ++.|..-
T Consensus       497 aL~Hp~f  503 (507)
T PLN03224        497 ALSHRFF  503 (507)
T ss_pred             HhCCCCc
Confidence            9999654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.87  E-value=1.9e-09  Score=76.67  Aligned_cols=128  Identities=14%  Similarity=0.149  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .++|+|+|++............   ..+..|--||.+.... |+...|+||+||+ ..++..+.||.......  ...-.
T Consensus       171 kLrlIDWGLAEFYHp~~eYnVR---VASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~--DQLVk  245 (338)
T KOG0668|consen  171 KLRLIDWGLAEFYHPGKEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVK  245 (338)
T ss_pred             eeeeeecchHhhcCCCceeeee---eehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH--HHHHH
Confidence            4689999999875443333322   4566778999887644 7889999999998 68888888875433222  11111


Q ss_pred             HHHHHhcCCccc-------ccCccc--------ccCC--------cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALE-------LMDPVL--------KQSC--------VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~-------~~~~~~--------~~~~--------~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      +....+..++..       -+++..        +..+        ......+.++++.+.|..|-++|+|+.|.+.|.
T Consensus       246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp  323 (338)
T KOG0668|consen  246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP  323 (338)
T ss_pred             HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence            111111100000       011111        1110        011135789999999999999999999999875

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.86  E-value=3.5e-09  Score=74.53  Aligned_cols=83  Identities=33%  Similarity=0.594  Sum_probs=63.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +++|+|||.+........  ......+...|++||..... .++.+.|+|++|++ +++                     
T Consensus       131 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------  187 (215)
T cd00180         131 KVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------  187 (215)
T ss_pred             cEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence            478999999876532211  12223567789999998776 67788999999987 555                     


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                                                 ..+.+++..|++.+|.+||++.+++.++
T Consensus       188 ---------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ---------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ---------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                       3678899999999999999999999764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.81  E-value=1.5e-09  Score=84.92  Aligned_cols=112  Identities=24%  Similarity=0.368  Sum_probs=67.7

Q ss_pred             CceeeceecceeecCCC----CcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQ----NEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~----~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~   75 (181)
                      ++||.|||+.-.+....    .....+...|+.+||+||.+.+..|+.++|||++|++ ++++.- ...+.        .
T Consensus       394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e--------r  465 (516)
T KOG1033|consen  394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE--------R  465 (516)
T ss_pred             hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH--------H
Confidence            37899999976543322    1122345689999999999999999999999999987 677651 11110        0


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      ...  ......+    .+.+.....     .+.-..|+..+++..|.+||++.++--
T Consensus       466 ~~t--~~d~r~g----~ip~~~~~d-----~p~e~~ll~~lls~~p~~RP~~~~~~~  511 (516)
T KOG1033|consen  466 IAT--LTDIRDG----IIPPEFLQD-----YPEEYTLLQQLLSPSPEERPSAIEVAL  511 (516)
T ss_pred             HHh--hhhhhcC----CCChHHhhc-----CcHHHHHHHHhcCCCcccCchHHHHhh
Confidence            000  0000111    111111111     123456788999999999996665443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.66  E-value=6.2e-09  Score=75.88  Aligned_cols=96  Identities=18%  Similarity=0.216  Sum_probs=68.1

Q ss_pred             ccCCCccCccccccCccC---cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCc
Q 041917           27 VGTYGYMAPEYAMEGVFS---IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV  102 (181)
Q Consensus        27 ~g~~~~~aPe~~~~~~~~---~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (181)
                      ...+.|++||.+..++-+   ..+|.|||+++ ||+.+...||.....++.-       .        .+.-..++..++
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg-------m--------kialeglrv~ip  411 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG-------M--------KIALEGLRVHIP  411 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh-------h--------hhhhccccccCC
Confidence            346789999998765533   56999999987 8999888887543322110       0        111123333445


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917          103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus       103 ~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      +.....+.++|.-|+..||.+||.+..|+-.|+..
T Consensus       412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            55556789999999999999999999999888764

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.58  E-value=5.8e-08  Score=78.17  Aligned_cols=47  Identities=28%  Similarity=0.377  Sum_probs=40.9

Q ss_pred             cccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917           24 NRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus        24 ~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      +..+||..|+|||++....|+..+|.|+.||+ ++|+.|+.||.....
T Consensus       829 hslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  829 HSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP  876 (1034)
T ss_pred             hhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC
Confidence            35689999999999999999999999999987 899999999854433

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.55  E-value=6e-08  Score=70.71  Aligned_cols=116  Identities=18%  Similarity=0.241  Sum_probs=66.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---C--ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---G--VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~--~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||||||+.+..+....     ..--...|.+||.+..   .  ......|+|.||++ +..++|+.|+....-+   .
T Consensus       161 rvKlcDFG~t~k~g~tV~-----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~---d  232 (378)
T KOG1345|consen  161 RVKLCDFGLTRKVGTTVK-----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM---D  232 (378)
T ss_pred             EEEeeecccccccCceeh-----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc---C
Confidence            589999999876432111     1122345778886542   2  24577999999987 7889999987532222   2


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVV  131 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl  131 (181)
                      -..+.+..+........++.. .     .....++++.++-+..++++|-...++.
T Consensus       233 ~~Y~~~~~w~~rk~~~~P~~F-~-----~fs~~a~r~Fkk~lt~~~~drcki~~~k  282 (378)
T KOG1345|consen  233 KPYWEWEQWLKRKNPALPKKF-N-----PFSEKALRLFKKSLTPRFKDRCKIWTAK  282 (378)
T ss_pred             chHHHHHHHhcccCccCchhh-c-----ccCHHHHHHHHHhcCCcccccchhHHHH
Confidence            223334444333222222111 0     1123466777788999999994444433

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.51  E-value=2.6e-07  Score=63.70  Aligned_cols=128  Identities=21%  Similarity=0.197  Sum_probs=73.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCC-CCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRN-SGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~-~~~~~~~~~~~~~~   78 (181)
                      ++|++|||+++...-  ...+.....-+.+|.+|.++.+.+ |+...|.||.||+ .|+.....| |+.   .+......
T Consensus       139 elkladfglarafgi--pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg---~dvddqlk  213 (292)
T KOG0662|consen  139 ELKLADFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG---NDVDDQLK  213 (292)
T ss_pred             cEEecccchhhhcCC--ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC---CcHHHHHH
Confidence            579999999986542  222233345688999999998766 7888999999998 566543333 321   11111111


Q ss_pred             HHHHHHhcC------CcccccCcccccCCcHHH-----HH----HHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           79 YTWKLWCEG------EALELMDPVLKQSCVGAE-----LL----KYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        79 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~-----~~----~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .+.......      .+..+.+-....-++...     .+    .=.+++...+.-+|.+|.++++.++|.
T Consensus       214 rif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp  284 (292)
T KOG0662|consen  214 RIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP  284 (292)
T ss_pred             HHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence            111111111      111122211111111111     11    125677888888999999999988874

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.38  E-value=6.3e-08  Score=81.58  Aligned_cols=111  Identities=18%  Similarity=0.183  Sum_probs=70.2

Q ss_pred             CceeeceecceeecCCC-C------------cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQ-N------------EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-~------------~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      ++|++|||+++...... .            .....+.+|++.|+|||++....|+..+|.|++|++ ++++.|+.||..
T Consensus       181 hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG  260 (1205)
T KOG0606|consen  181 HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  260 (1205)
T ss_pred             cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence            67999999987431110 0            011124689999999999999999999999999987 899999999754


Q ss_pred             CcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 041917           68 YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS  126 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt  126 (181)
                      ....+....  +    ..  +...+++..      .....+..+++...|+.+|..|.-
T Consensus       261 dtpeelfg~--v----is--d~i~wpE~d------ea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  261 DTPEELFGQ--V----IS--DDIEWPEED------EALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             CCHHHHHhh--h----hh--hhccccccC------cCCCHHHHHHHHHHHHhChHhhcc
Confidence            322111111  0    00  011122210      011125677778888889988873

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.33  E-value=5.3e-07  Score=69.00  Aligned_cols=111  Identities=18%  Similarity=0.155  Sum_probs=66.0

Q ss_pred             cccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH---------HHHHhcCC--cc--
Q 041917           26 VVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT---------WKLWCEGE--AL--   90 (181)
Q Consensus        26 ~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--~~--   90 (181)
                      ..||++|.|||++.... -+.++||||.|++ +.+++++.||... ..+...+.+..         ......+.  +.  
T Consensus       237 rAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a-~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~k  315 (418)
T KOG1167|consen  237 RAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKA-KDDADALAEIATIFGSAEMRKCAALPGRILLWQK  315 (418)
T ss_pred             cCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccC-ccccchHHHHHHHhChHHHHHHhhcCCceeeecc
Confidence            47999999999987655 4577999999988 8999998887421 11111111111         00000000  00  


Q ss_pred             ------------------cccCcc----cccC-CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           91 ------------------ELMDPV----LKQS-CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        91 ------------------~~~~~~----~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                                        +.+.+.    +... ........+++++.+|+..||.+|.|+++.|+|..-.
T Consensus       316 sn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  316 SNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             ccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence                              000000    0000 0111122578999999999999999999999987543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.18  E-value=5.3e-07  Score=72.25  Aligned_cols=97  Identities=24%  Similarity=0.299  Sum_probs=67.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++|+.|||+++.......      .||+..|||||++.  .....+|.|++|++ +++++|..||..       .+    
T Consensus       135 hi~~tdfglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~----  195 (612)
T KOG0603|consen  135 HIKLTDFGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DT----  195 (612)
T ss_pred             ccccCCchhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HH----
Confidence            578999999986422111      18999999999987  45678999999998 899999998742       11    


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM  127 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~  127 (181)
                      ...        ++.  .+...+...+....+++..++..+|..|.-.
T Consensus       196 ~~~--------Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  196 MKR--------ILK--AELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             HHH--------Hhh--hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            000        111  1112334445566777788888999999876

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.11  E-value=5.4e-07  Score=71.85  Aligned_cols=60  Identities=30%  Similarity=0.381  Sum_probs=45.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcc-cceeehhHH-HHHHhcCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIK-SDVFSFGVL-LEIVSGKRNS   65 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~-~diws~gv~-~~~~~g~~~~   65 (181)
                      -+||+|||.+...+.    .....+.||..|.|||++.+..|..+ .|||++|++ +.++....|+
T Consensus       708 ~~klidfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  708 FVKLIDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             eEEEeeccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence            379999999876432    12234689999999999999998755 999999997 6666665554

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.05  E-value=3.4e-06  Score=60.15  Aligned_cols=64  Identities=30%  Similarity=0.419  Sum_probs=47.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccc-ccCccCcccceeehhHH-HHHHhcCCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYA-MEGVFSIKSDVFSFGVL-LEIVSGKRNSG   66 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~-~~~~~~~~~diws~gv~-~~~~~g~~~~~   66 (181)
                      .++|+|||.+......... ......+...|++||.. ....++.++|+|++|++ +++++|+.||.
T Consensus       136 ~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      136 LVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             CEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            5789999998865433210 11234567789999988 55667779999999986 89999998873

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.91  E-value=5.4e-05  Score=56.41  Aligned_cols=128  Identities=24%  Similarity=0.232  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCcc----cccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEA----NTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~----~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~   73 (181)
                      .++++|||.++.........    ......|+..|++||.+..   ..+....|+|++|++ ++++.+..|+......  
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~--  217 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS--  217 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc--
Confidence            36899999988554322211    2345688999999999987   467788999999976 7888888874322110  


Q ss_pred             cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           74 HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ...... ......... ..................+.+++..|+..+|..|.+..+...+
T Consensus       218 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         218 SATSQT-LKIILELPT-PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccHHHH-HHHHHhcCC-cccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            001111 111111110 0000001100001222457788899999999999999988776

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.61  E-value=7e-05  Score=64.36  Aligned_cols=87  Identities=20%  Similarity=0.242  Sum_probs=52.5

Q ss_pred             CCccCccccccC----------c-cCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcchHHHHHHHHh-cCCcccccCc
Q 041917           30 YGYMAPEYAMEG----------V-FSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHSLLTYTWKLWC-EGEALELMDP   95 (181)
Q Consensus        30 ~~~~aPe~~~~~----------~-~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   95 (181)
                      .+|+|||.+...          . ...+.||+|+||+ .|++.. +.+|.         +.+....... .......++ 
T Consensus       191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~---------LSQL~aYr~~~~~~~e~~Le-  260 (1431)
T KOG1240|consen  191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT---------LSQLLAYRSGNADDPEQLLE-  260 (1431)
T ss_pred             eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc---------HHHHHhHhccCccCHHHHHH-
Confidence            479999987531          1 5577999999987 788765 44442         1111111111 011111111 


Q ss_pred             ccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           96 VLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        96 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      .+++       ..+..++..|++.||.+|.++.+.|+.
T Consensus       261 ~Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  261 KIED-------VSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             hCcC-------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence            1111       136678889999999999999999876

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.56  E-value=2.7e-05  Score=64.15  Aligned_cols=125  Identities=21%  Similarity=0.237  Sum_probs=77.1

Q ss_pred             CceeeceecceeecC-CCCccccccccc-CCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGG-NQNEANTNRVVG-TYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~-~~~~~~~~~~~g-~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+|++|||++..... ..........+| +..|+|||...+..+ ....|+|+.|++ ..+++|..|+............
T Consensus       163 ~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~  242 (601)
T KOG0590|consen  163 ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS  242 (601)
T ss_pred             cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee
Confidence            368999999986654 333333345678 999999999887544 466999999987 7788888886543333211110


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .      ....  .......    .........+++.+++..+|..|.+.+++...-....
T Consensus       243 ~------~~~~--~~~~~~~----~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  243 W------KSNK--GRFTQLP----WNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             e------cccc--cccccCc----cccCChhhhhcccccccCCchhccccccccccccccc
Confidence            0      0000  0000000    0011124667778888899999999998876655443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.31  E-value=0.00018  Score=53.83  Aligned_cols=97  Identities=13%  Similarity=0.165  Sum_probs=52.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc--------CccCcccceeehhHH-HHHHhcCCCCCCCcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--------~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~   72 (181)
                      .+.|+||+.....+  .....   ...+..|.+||....        ..++.+.|.|.+|++ +.+.++.-|+.......
T Consensus       183 ~v~Lg~F~~~~r~g--~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~  257 (288)
T PF14531_consen  183 GVFLGDFSSLVRAG--TRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEA  257 (288)
T ss_dssp             -EEE--GGGEEETT--EEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGS
T ss_pred             CEEEcChHHHeecC--ceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccc
Confidence            36788887654321  11111   123456889987643        246788999999986 88999988875332111


Q ss_pred             CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCC
Q 041917           73 GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARR  124 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R  124 (181)
                      ....                   ... .|. .....+..|+..+|+++|.+|
T Consensus       258 ~~~~-------------------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  258 DPEW-------------------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             TSGG-------------------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred             cccc-------------------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence            1100                   111 122 344467789999999999887

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.25  E-value=0.00099  Score=51.79  Aligned_cols=119  Identities=20%  Similarity=0.162  Sum_probs=67.6

Q ss_pred             CceeeceecceeecCCC----CcccccccccCCCccCccccccCc-----cC-cccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQ----NEANTNRVVGTYGYMAPEYAMEGV-----FS-IKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~----~~~~~~~~~g~~~~~aPe~~~~~~-----~~-~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      ++.|+|||.+---....    ......+..|....||||+....+     .+ .++|.|+.|.+ +|+.....||... +
T Consensus       383 ~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~r-G  461 (598)
T KOG4158|consen  383 QLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKR-G  461 (598)
T ss_pred             EEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCccccc-c
Confidence            35689999764221100    111122346777899999875321     22 67999999987 8988888887541 1


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      +.......     +.+..+.     .+...++    ..+.+++...++.||.+|++..-....|+
T Consensus       462 em~L~~r~-----Yqe~qLP-----alp~~vp----p~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  462 EMLLDTRT-----YQESQLP-----ALPSRVP----PVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             hheechhh-----hhhhhCC-----CCcccCC----hHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            11111111     1111111     1111222    24667778899999999998765444443

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.07  E-value=0.0024  Score=48.78  Aligned_cols=126  Identities=18%  Similarity=0.100  Sum_probs=75.2

Q ss_pred             Cceeeceecce--eecCCCCc--cc----ccccccCCCccCccccccCccCcccceeehhH-HHHHHhcCCCCCCCcCCC
Q 041917            2 NPKISDFGMAR--IFGGNQNE--AN----TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGKRNSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~--~~~~~~~~--~~----~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv-~~~~~~g~~~~~~~~~~~   72 (181)
                      .+.|.|||+++  ........  ..    ...+.||..|.++....+...+.+.|+||++- +.++..|..|+.......
T Consensus       165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~  244 (322)
T KOG1164|consen  165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD  244 (322)
T ss_pred             eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc
Confidence            46799999998  32211111  00    12345999999999988888899999999885 488888887764332211


Q ss_pred             CcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           73 GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .  .... ...... .   ....     .......++..++..+-..+...+|....+...|++...
T Consensus       245 ~--~~~~-~~~~~~-~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~  299 (322)
T KOG1164|consen  245 L--KSKF-EKDPRK-L---LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD  299 (322)
T ss_pred             h--HHHH-HHHhhh-h---cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence            1  1111 111000 0   0000     011112245555566666889999999999888766544

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.48  E-value=0.012  Score=44.90  Aligned_cols=68  Identities=21%  Similarity=0.276  Sum_probs=51.2

Q ss_pred             ceeeceecceeecCCCCccc-----ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            3 PKISDFGMARIFGGNQNEAN-----TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~-----~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      +.|+|||+++......+..+     ..+..||..||.-....+..-+.+-|.=++|-+ +.++.|..|+.....
T Consensus       168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             EEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence            56899999986543333222     234689999999988888888888999999954 888999999865433

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=95.44  E-value=0.018  Score=30.94  Aligned_cols=43  Identities=35%  Similarity=0.588  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCcccccccccCCCccccC-CCcccCcceecccCCC
Q 041917          139 ITLPPPTQPAFSVGRMVASSGPFFSSD-SKFCSINEITLSSVYP  181 (181)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  181 (181)
                      ..++.|++|+|.+++......++.... ....++|++|+|-+++
T Consensus         4 ~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~   47 (48)
T PF11883_consen    4 ATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEA   47 (48)
T ss_pred             ccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEec
Confidence            467889999999999877653332221 2689999999997754

; GO: 0004674 protein serine/threonine kinase activity

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=94.98  E-value=0.0083  Score=45.72  Aligned_cols=90  Identities=18%  Similarity=0.180  Sum_probs=50.8

Q ss_pred             ccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHH
Q 041917           27 VGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAE  105 (181)
Q Consensus        27 ~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (181)
                      .+-++|.+|+.-........+|||+||+. +++..+..-.....   .....   ....  ......+...+.       
T Consensus       243 ~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnse---S~~~~---ee~i--a~~i~~len~lq-------  307 (458)
T KOG1266|consen  243 TSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSE---SKVEV---EENI--ANVIIGLENGLQ-------  307 (458)
T ss_pred             ccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCc---ceeeh---hhhh--hhheeeccCccc-------
Confidence            34567788887666666788999999954 77765543211100   00000   0000  001111111111       


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917          106 LLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus       106 ~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                          ..++..|++-+|..||+|++++.|.-
T Consensus       308 ----r~~i~kcl~~eP~~rp~ar~llfHpl  333 (458)
T KOG1266|consen  308 ----RGSITKCLEGEPNGRPDARLLLFHPL  333 (458)
T ss_pred             ----cCcCcccccCCCCCCcchhhhhcCce
Confidence                23446799999999999999987753

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=93.39  E-value=0.089  Score=42.72  Aligned_cols=114  Identities=20%  Similarity=0.258  Sum_probs=62.8

Q ss_pred             ceeeceecceeecCCCC---cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            3 PKISDFGMARIFGGNQN---EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~---~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+++|||+...+....-   .......-|...|++||...+ .+....|++++|.+ ++...+.+......   ...   
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~---~~~---  334 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK---NSS---  334 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC---CCC---
Confidence            46788988776532211   011112245667999998754 35778999999965 77777765532110   000   


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                        |....        .-.+..++...-...+...+..+++.++..|+++..++.+
T Consensus       335 --W~~~r--------~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  335 --WSQLR--------QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             --ccccc--------cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence              00000        0001112221122234446778999999999999876644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=93.36  E-value=0.063  Score=46.84  Aligned_cols=96  Identities=19%  Similarity=0.187  Sum_probs=61.9

Q ss_pred             cccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCc
Q 041917           24 NRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV  102 (181)
Q Consensus        24 ~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (181)
                      +...|+.-|.+||...+......+|.|+.|+. ++.++|..|+.......  .     ..+.....+ .+..-      +
T Consensus       993 ~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~--~-----f~ni~~~~~-~~p~g------~ 1058 (1205)
T KOG0606|consen  993 HAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ--I-----FENILNRDI-PWPEG------P 1058 (1205)
T ss_pred             ccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh--h-----hhccccCCC-CCCCC------c
Confidence            34678999999999999888889999999976 89999988874322111  0     011111111 11111      1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH---HHHHH
Q 041917          103 GAELLKYIHIGLLCVQEDPARRPSMS---SVVVM  133 (181)
Q Consensus       103 ~~~~~~~~~l~~~cl~~dp~~Rpt~~---evl~~  133 (181)
                      .....+..+++...+..++.+|..+.   ++..|
T Consensus      1059 ~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~ 1092 (1205)
T KOG0606|consen 1059 EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGH 1092 (1205)
T ss_pred             cccChhhhhhhhhhhccCchhccCcccccccccC
Confidence            11223456677788889999999888   66555

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=92.14  E-value=0.038  Score=48.03  Aligned_cols=61  Identities=16%  Similarity=0.100  Sum_probs=45.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK   62 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~   62 (181)
                      .++|+|||.+--+..-.+.......+++-.+.++|...+..++..+|-|.++-+ .-|+.|+
T Consensus       839 ~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  839 GLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             ceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            478999999864433233334445677888999999999999999999998844 5556664

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=91.11  E-value=0.18  Score=42.07  Aligned_cols=92  Identities=22%  Similarity=0.246  Sum_probs=50.8

Q ss_pred             CCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHH
Q 041917           30 YGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLK  108 (181)
Q Consensus        30 ~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (181)
                      .-|.|||++.......++|++|+|++ +.+-.++.+.....  .+...... .....+...         ..+...-..+
T Consensus       173 ~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~--~~~~~~~~-~~~~~~~~~---------~~~s~~~p~e  240 (700)
T KOG2137|consen  173 LNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAAN--GGLLSYSF-SRNLLNAGA---------FGYSNNLPSE  240 (700)
T ss_pred             cccccchhhccccccccccceeeeeEEEEEecCCcchhhcc--CCcchhhh-hhccccccc---------ccccccCcHH
Confidence            46999999988778889999999986 54443444321110  00000000 000000000         0001112235


Q ss_pred             HHHHHHhhccCCCCCCCCHHHHHHH
Q 041917          109 YIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus       109 ~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      +.+-+.+.+..+..-||++.++...
T Consensus       241 l~~~l~k~l~~~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  241 LRESLKKLLNGDSAVRPTLDLLLSI  265 (700)
T ss_pred             HHHHHHHHhcCCcccCcchhhhhcc
Confidence            6777778999999999977766543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=89.84  E-value=0.3  Score=41.31  Aligned_cols=51  Identities=22%  Similarity=0.305  Sum_probs=33.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGV   54 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv   54 (181)
                      ++||+|||+++.....  ........+++.|.+||....... ....++|++|.
T Consensus       142 ~vkL~DFGls~~~~~~--~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         142 HIKLTDFGLSKVTLNR--ELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             CEEEEeCCCCccccCC--cccccccccCccccCccccccCCCCceeeeeeecCc
Confidence            5899999999865322  112234578888999987654332 23467788875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=89.05  E-value=0.25  Score=38.63  Aligned_cols=39  Identities=15%  Similarity=0.215  Sum_probs=26.3

Q ss_pred             CceeeceecceeecCCCCccc------ccccccCCCccCcccccc
Q 041917            2 NPKISDFGMARIFGGNQNEAN------TNRVVGTYGYMAPEYAME   40 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~------~~~~~g~~~~~aPe~~~~   40 (181)
                      ++||+|||+++..........      .....++..|.+||.+..
T Consensus       150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            579999999987643322211      134567888999998853

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=87.19  E-value=0.15  Score=37.53  Aligned_cols=66  Identities=18%  Similarity=0.194  Sum_probs=43.2

Q ss_pred             ceeeceecceeecCCCCccc-----ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCC
Q 041917            3 PKISDFGMARIFGGNQNEAN-----TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFY   68 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~-----~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~   68 (181)
                      +-++|||+++......+..+     .....||..|.+-....+..-+.+-|.=|+|.+ +.+..|..|+...
T Consensus       153 l~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl  224 (341)
T KOG1163|consen  153 LYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL  224 (341)
T ss_pred             EEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence            45899999987643332221     123578888877554444445677888999954 6777788887544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	181
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		9e-15
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-14
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		6e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-09
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-08
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-08
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-08
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-08
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		4e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		7e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		8e-07
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-06
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-06
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-06
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-06
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-06
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-06
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-06
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-06
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-06
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-06
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-06
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-06
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		6e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		1e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		2e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-05
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		3e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		4e-05
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		4e-05
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		4e-05
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-05
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-05
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-05
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-05
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-05
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-05
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-05
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-05
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		4e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		5e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		5e-05
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		5e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		5e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		5e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		5e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		5e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		5e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		5e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		5e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		5e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		6e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-05
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		6e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-05
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		6e-05
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		6e-05
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		6e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		6e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		6e-05
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-05
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-05
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-05
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		7e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		8e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		8e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		8e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		8e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		8e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		9e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		3e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-04
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		4e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		4e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		4e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		4e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		5e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		5e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		5e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		5e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		5e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		6e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		6e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		6e-04
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		7e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		7e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		7e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		7e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		7e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		8e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		8e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		8e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		8e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		8e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		8e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		9e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		9e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		9e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		9e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		9e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		9e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 5   ISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGKR 63
           + DFG+A++            V GT G++APEY   G  S K+DVF +GV LLE+++G+R
Sbjct: 183 VGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 64  NSGFYLSK----DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
              F L++    D   LL +   L  E +   L+D  L+ +    E+ + I + LLC Q 
Sbjct: 242 --AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 120 DPARRPSMSSVVVMLASDTIT 140
            P  RP MS VV ML  D + 
Sbjct: 300 SPMERPKMSEVVRMLEGDGLA 320

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 5   ISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGKR 63
           + DFG+A++            V G  G++APEY   G  S K+DVF +GV LLE+++G+R
Sbjct: 175 VGDFGLAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 64  NSGFYLSK----DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
              F L++    D   LL +   L  E +   L+D  L+ +    E+ + I + LLC Q 
Sbjct: 234 --AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 120 DPARRPSMSSVVVMLASDTIT 140
            P  RP MS VV ML  D + 
Sbjct: 292 SPMERPKMSEVVRMLEGDGLA 312

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 3   PKISDFGMARIFGGNQNEANTNRVV-GTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           PKI+DFG+++  G   ++ +   VV GT GY+ PEY ++G  + KSDV+SFGV+L E++ 
Sbjct: 178 PKITDFGISKK-GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
            +      L ++  +L  +  +    G+  +++DP L        L K+    + C+   
Sbjct: 237 ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS 296
Query: 121 PARRPSMSSVVVML 134
              RPSM  V+  L
Sbjct: 297 SEDRPSMGDVLWKL 310

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 3   PKISDFGMARIFGGNQNEANTNRVV-GTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           PKI+DFG+++  G    + +   VV GT GY+ PEY ++G  + KSDV+SFGV+L E++ 
Sbjct: 178 PKITDFGISKK-GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
            +      L ++  +L  +  +    G+  +++DP L        L K+    + C+   
Sbjct: 237 ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS 296
Query: 121 PARRPSMSSVVVML 134
              RPSM  V+  L
Sbjct: 297 SEDRPSMGDVLWKL 310

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           KISDFG+AR           +R+VGT  YMAPE A+ G  + KSD++SFG VLLEI++G
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           KISDFG+AR            R+VGT  YMAPE A+ G  + KSD++SFG VLLEI++G
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           KISDFG+AR            R+VGT  YMAPE A+ G  + KSD++SFG VLLEI++G
Sbjct: 167 KISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           KISDFG+AR           +R+VGT  Y APE A+ G  + KSD++SFG VLLEI++G
Sbjct: 164 KISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQP 282

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 145 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 203
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 204 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 247
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 248 EERPTFEYLQAFLEDYFTSTEPQYQP 273

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQPA 148
             RP+   +   L     +  P  QP 
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQPG 283

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQPA 148
             RP+   +   L     +  P  QP 
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQPG 283

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQPA 148
             RP+   +   L     +  P  QP 
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQPG 283

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 143 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 201
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 202 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 245
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 246 EERPTFEYLQAFLEDYFTSTEPQYQP 271

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQP 282

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQP 282

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQP 282

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 213 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 256
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 257 EERPTFEYLQAFLEDYFTSTEPQYQP 282

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL E+V+  
Sbjct: 145 KIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 203
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
           R    Y   +               E LE ++   +  C     +    + + C ++DP 
Sbjct: 204 RVP--YPGMNNR-------------EVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPE 248
Query: 123 RRPSMSSVVVMLASDTITLPPPTQPA 148
            RP+   +   L        P  QP 
Sbjct: 249 ERPTFEYLQSFLEDYFTATEPQYQPG 274

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+ R+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 321 KVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 379
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C ++DP
Sbjct: 380 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKDP 423
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQPA 148
             RP+   +   L     +  P  QP 
Sbjct: 424 EERPTFEYLQAFLEDYFTSTEPQXQPG 450

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 379 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 422
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 423 EERPTFEYLQAFLEDYFTSTEPQXQP 448

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 379 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 422
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQPA 148
             RP+   +   L     +  P  QP 
Sbjct: 423 EERPTFEYLQAFLEDYFTSTEPQXQPG 449

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 144 KVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 202
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 203 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 246
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 247 EERPTFEYLQAFLEDYFTSTEPQYQP 272

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 403 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 461
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 462 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 505
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQPA 148
             RP+   +   L     +  P  QP 
Sbjct: 506 EERPTFEYLQAFLEDYFTSTEPQXQPG 532

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 147 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 205
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 206 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 249
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 250 EERPTFEYLQAFLEDYFTSTEPQYQP 275

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 151 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 210 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 253
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 254 EERPTFEYLQAFLEDYFTSTEPQYQP 279

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 379 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 422
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 423 EERPTFEYLQAFLEDYFTSTEPQYQP 448

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K+ D G+ R F      A++  +VGT  YM+PE   E  ++ KSD++S G LL  ++  +
Sbjct: 176 KLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233
Query: 64  NSGFYLSKDGHSLLTYTWKLWCEGEALELMD-PVLKQSCVGAELLKYIHIGLLCVQEDPA 122
            S FY  K           L+   + +E  D P L       EL + ++   +C+  DP 
Sbjct: 234 -SPFYGDK---------MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN---MCINPDPE 280
Query: 123 RRPSMSSV 130
           +RP ++ V
Sbjct: 281 KRPDVTYV 288

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEIVSGKR 63
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL  ++ K 
Sbjct: 151 KVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
Query: 64  NSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP 121
              +   ++++    +   +++ C  E  E +  ++ Q                C +++P
Sbjct: 210 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----------------CWRKEP 253
Query: 122 ARRPSMSSVVVMLASDTITLPPPTQP 147
             RP+   +   L     +  P  QP
Sbjct: 254 EERPTFEYLQAFLEDYFTSTEPQYQP 279

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KI DFG+AR    N +            +MAPE   + ++S KSDV+S+GVLL EI S  
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLG 298
Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
           G    G  + +D  S L    ++     A E   P + Q            I L C   D
Sbjct: 299 GSPYPGVQMDEDFCSRLREGMRM----RAPEYSTPEIYQ------------IMLDCWHRD 342
Query: 121 PARRPSMSSVVVMLAS 136
           P  RP  + +V  L  
Sbjct: 343 PKERPRFAELVEKLGD 358

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 155 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 63  R 63
           R
Sbjct: 214 R 214

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 149 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  R 63
           R
Sbjct: 208 R 208

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 158 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 63  R 63
           R
Sbjct: 217 R 217

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 157 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 63  R 63
           R
Sbjct: 216 R 216

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 151 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 63  R 63
           R
Sbjct: 210 R 210

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 149 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  R 63
           R
Sbjct: 208 R 208

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 150 KIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 63  R 63
           R
Sbjct: 209 R 209

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 155 KIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 63  R 63
           R
Sbjct: 214 R 214

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 154 KIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 63  R 63
           R
Sbjct: 213 R 213

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 159 KIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 63  R 63
           R
Sbjct: 218 R 218

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 149 KIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  R 63
           R
Sbjct: 208 R 208

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 144 KIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 63  R 63
           R
Sbjct: 203 R 203

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 145 KIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 63  R 63
           R
Sbjct: 204 R 204

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + N            +MAPE   EG+++IKSDV+S+G+LL EI S
Sbjct: 212 KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR      +        G Y +MAPE     +FS  SDV+S+GVLL E+++G+
Sbjct: 156 KITDFGLAR----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 151 KIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 209
Query: 63  R 63
           R
Sbjct: 210 R 210

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+
Sbjct: 150 KIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG+AR+    ++   T R    +   + APE    G F+IKSDV+SFG+LL EIV+
Sbjct: 149 KIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
Query: 61  GKR 63
             R
Sbjct: 206 HGR 208

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV+  
Sbjct: 324 KIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 63  R 63
           R
Sbjct: 383 R 383

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G VL E+++G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 62  K 62
           +
Sbjct: 216 E 216

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G VL E+++G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 62  K 62
           +
Sbjct: 216 E 216

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G VL E+++G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 62  K 62
           +
Sbjct: 216 E 216

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G VL E+++G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 62  K 62
           +
Sbjct: 216 E 216

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G VL E+++G
Sbjct: 156 KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 62  K 62
           +
Sbjct: 216 E 216

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           N K+ DFG+ARI   N +E      VGT  YM+PE      ++ KSD++S G LL
Sbjct: 154 NVKLGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 175 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 232
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 233 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 277
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 278 PEDRPNFAIIL 288

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 240
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 241 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 285
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 286 PEDRPNFAIIL 296

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 241
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 242 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 286
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 287 PEDRPNFAIIL 297

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 240
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 241 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 285
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 286 PEDRPNFAIIL 296

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G VL E+++G
Sbjct: 173 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
Query: 62  K 62
           +
Sbjct: 233 E 233

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 241
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 242 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 286
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 287 PEDRPNFAIIL 297

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 255
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 256 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 300
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 301 PEDRPNFAIIL 311

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 255
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 256 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 300
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 301 PEDRPNFAIIL 311

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 200 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 257
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 258 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 302
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 303 PEDRPNFAIIL 313

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 255
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 256 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 300
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 301 PEDRPNFAIIL 311

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 190 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 247
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 248 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 292
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 293 PEDRPNFAIIL 303

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 210 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 267
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 268 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 312
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 313 PEDRPNFAIIL 323

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 190 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S  
Sbjct: 192 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 251
Query: 63  R--------NSGFY-LSKDGHSL 76
                    NS FY L KDG+ +
Sbjct: 252 LNPYPGILVNSKFYKLVKDGYQM 274

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S  
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 63  R--------NSGFY-LSKDGHSL 76
                    NS FY L KDG+ +
Sbjct: 258 LNPYPGILVNSKFYKLVKDGYQM 280

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S  
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
Query: 63  R--------NSGFY-LSKDGHSL 76
                    NS FY L KDG+ +
Sbjct: 264 LNPYPGILVNSKFYKLVKDGYQM 286

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S  
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
Query: 63  R--------NSGFY-LSKDGHSL 76
                    NS FY L KDG+ +
Sbjct: 264 LNPYPGILVNSKFYKLVKDGYQM 286

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 184 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 281
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 282 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 326
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 327 PEDRPNFAIIL 337

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 184 KIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S  
Sbjct: 206 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 265
Query: 63  R--------NSGFY-LSKDGHSL 76
                    NS FY L KDG+ +
Sbjct: 266 LNPYPGILVNSKFYKLVKDGYQM 288

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 238 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMAR              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 201 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 258
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 259 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 303
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 304 PEDRPNFAIIL 314

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE   + V++++SDV+S+G+LL EI S  
Sbjct: 200 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 259
Query: 63  R--------NSGFY-LSKDGHSL 76
                    NS FY L KDG+ +
Sbjct: 260 LNPYPGILVNSKFYKLVKDGYQM 282

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL 56
           N KISDFG+A +F  N  E   N++ GT  Y+APE      F  +  DV+S G++L
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 231 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S
Sbjct: 240 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E   S  SD+++ G ++ ++V
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLV 228
Query: 60  SG 61
           +G
Sbjct: 229 AG 230

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           KI+DFG+AR+   N+  A          + APE    G F+IKS+V+SFG+LL EIV+
Sbjct: 149 KIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           +ISD G+A  F   +  A+    VGT+GYMAPE   +GV +   +D FS G +L +++ G
Sbjct: 332 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCE 86
                 + +KD H +   T  +  E
Sbjct: 388 HSPFRQHKTKDKHEIDRMTLTMAVE 412

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           +ISD G+A  F   +  A+    VGT+GYMAPE   +GV +   +D FS G +L +++ G
Sbjct: 332 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCE 86
                 + +KD H +   T  +  E
Sbjct: 388 HSPFRQHKTKDKHEIDRMTLTMAVE 412

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           +ISD G+A  F   +  A+    VGT+GYMAPE   +GV +   +D FS G +L +++ G
Sbjct: 332 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCE 86
                 + +KD H +   T  +  E
Sbjct: 388 HSPFRQHKTKDKHEIDRMTLTMAVE 412

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR         NT        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EIVSG 61
           +ISD G+A  F   +  A+    VGT+GYMAPE   +GV +   +D FS G +L +++ G
Sbjct: 331 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCE 86
                 + +KD H +   T  +  E
Sbjct: 387 HSPFRQHKTKDKHEIDRMTLTMAVE 411

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           N K+ DFG+ARI   + + A T   VGT  YM+PE      ++ KSD++S G LL
Sbjct: 154 NVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 170 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 230 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPK 274
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 275 MRPTFLEIVNLLKDD 289

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 167 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 226
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 227 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPK 271
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 272 MRPTFLEIVNLLKDD 286

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGMA+              +    +M PE  MEG+F+ K+D +SFGVLL EI S  
Sbjct: 184 KIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-- 241
Query: 63  RNSGF--YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
              G+  Y SK    +L +         +   MDP   ++C G        I   C Q  
Sbjct: 242 --LGYMPYPSKSNQEVLEFV-------TSGGRMDP--PKNCPGP----VYRIMTQCWQHQ 286
Query: 121 PARRPSMSSVV 131
           P  RP+ + ++
Sbjct: 287 PEDRPNFAIIL 297

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 170 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 230 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPN 274
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 275 MRPTFLEIVNLLKDD 289

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 170 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNTFSIKSDVWAFGVLL 221

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           N K+ DFG+ARI   N + +     VGT  YM+PE      ++ KSD++S G LL
Sbjct: 154 NVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 147 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
Query: 60  SG 61
           +G
Sbjct: 207 AG 208

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRM 271

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 146 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
Query: 60  SG 61
           +G
Sbjct: 206 AG 207

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 144 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 203
Query: 60  SG 61
           +G
Sbjct: 204 AG 205

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
Query: 60  SG 61
           +G
Sbjct: 205 AG 206

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 149 KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 200

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLV 228
Query: 60  SG 61
           +G
Sbjct: 229 AG 230

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 151 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 210
Query: 60  SG 61
           +G
Sbjct: 211 AG 212

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 60  SG 61
           +G
Sbjct: 229 AG 230

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 152 KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 203

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 156 KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 207

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 172 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
Query: 60  SG 61
           +G
Sbjct: 232 AG 233

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 60  SG 61
           +G
Sbjct: 227 AG 228

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 60  SG 61
           +G
Sbjct: 227 AG 228

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 174 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 233
Query: 60  SG 61
           +G
Sbjct: 234 AG 235

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 170 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 60  SG 61
           +G
Sbjct: 230 AG 231

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 60  SG 61
           +G
Sbjct: 227 AG 228

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 149 KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 200

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 60  SG 61
           +G
Sbjct: 229 AG 230

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 60  SG 61
           +G
Sbjct: 229 AG 230

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 60  SG 61
           +G
Sbjct: 229 AG 230

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 170 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 60  SG 61
           +G
Sbjct: 230 AG 231

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 303 GSPYPGIPVEELFKLLKEGHRM 324

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 166 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 60  SG 61
           +G
Sbjct: 226 AG 227

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 60  SG 61
           +G
Sbjct: 227 AG 228

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 207

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 207

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 202

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 166 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 60  SG 61
           +G
Sbjct: 226 AG 227

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 202

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 155 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 206

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 202

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 207

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 202

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 204

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 1   MNPKISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           +N KISD G+ R ++  +  +   N ++    +MAPE  M G FSI SD++S+GV+L
Sbjct: 182 LNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVL 237

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 204

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 244 GSPYPGIPVEELFKLLKEGHRM 265

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 202

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 207

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 202

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 164 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 215

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 249 GSPYPGIPVEELFKLLKEGHRM 270

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 1   MNPKISDFGMAR-IFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           +N KISD G+ R ++  +  +   N ++    +MAPE  M G FSI SD++S+GV+L
Sbjct: 165 LNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVL 220

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 246 GSPYPGIPVEELFKLLKEGHRM 267

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 358 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 409

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 235 GSPYPGVPVEELFKLLKEGHRM 256

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 170 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 230 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPK 274
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 275 MRPTFLEIVNLLKDD 289

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 397 KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 448

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRM 271

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI+DFG+AR+  G++ E N +       +MA E      F+ +SDV+S+GV +
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 232

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL
Sbjct: 149 KVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLL 200

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 243 GSPYPGVPVEELFKLLKEGHRM 264

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 169 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 228
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 229 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPK 273
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 274 MRPTFLEIVNLLKDD 288

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 238
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 239 GSPYPGVPVEELFKLLKEGHRM 260

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRM 271

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K+SDFG+ +       EA++ +  G     + APE   E  FS KSDV+SFG+LL EI S
Sbjct: 148 KVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
Query: 61  GKR 63
             R
Sbjct: 201 FGR 203

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRM 271

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 171 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 230
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 231 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPN 275
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 276 MRPTFLEIVNLLKDD 290

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 170 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 230 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPN 274
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 275 MRPTFLEIVNLLKDD 289

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 242 GSPYPGVPVEELFKLLKEGHRM 263

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI+DFG+AR+  G++ E N +       +MA E      F+ +SDV+S+GV +
Sbjct: 157 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 209

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFGM R            + +    +MAPE   +GVF+  SD++SFGV+L EI S  
Sbjct: 170 KIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                 LS +         K   +G  L+  D   ++     +L++      +C Q +P 
Sbjct: 230 EQPYQGLSNE------QVLKFVMDGGYLDQPDNCPERV---TDLMR------MCWQFNPK 274
Query: 123 RRPSMSSVVVMLASD 137
            RP+   +V +L  D
Sbjct: 275 MRPTFLEIVNLLKDD 289

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 33/141 (23%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+ L E+ S  
Sbjct: 208 KICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 63  R--------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY + K+G  +L+       E    E+ D                 I 
Sbjct: 268 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 304
Query: 114 LLCVQEDPARRPSMSSVVVML 134
             C   DP +RP+   +V ++
Sbjct: 305 KTCWDADPLKRPTFKQIVQLI 325

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFGM R            + +    +M+PE   +GVF+  SDV+SFGV+L
Sbjct: 163 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 215

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 33/141 (23%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+ L E+ S  
Sbjct: 208 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 63  R--------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY + K+G  +L+       E    E+ D                 I 
Sbjct: 268 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 304
Query: 114 LLCVQEDPARRPSMSSVVVML 134
             C   DP +RP+   +V ++
Sbjct: 305 KTCWDADPLKRPTFKQIVQLI 325

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 33/141 (23%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+ L E+ S  
Sbjct: 203 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 262
Query: 63  R--------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY + K+G  +L+       E    E+ D                 I 
Sbjct: 263 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 299
Query: 114 LLCVQEDPARRPSMSSVVVML 134
             C   DP +RP+   +V ++
Sbjct: 300 KTCWDADPLKRPTFKQIVQLI 320

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFGM R            + +    +M+PE   +GVF+  SDV+SFGV+L
Sbjct: 172 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI  + 
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 291 GSPYPGVPVEELFKLLKEGHRM 312

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 33/141 (23%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+ L E+ S  
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 260
Query: 63  R--------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY + K+G  +L+       E    E+ D                 I 
Sbjct: 261 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 297
Query: 114 LLCVQEDPARRPSMSSVVVML 134
             C   DP +RP+   +V ++
Sbjct: 298 KTCWDADPLKRPTFKQIVQLI 318

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI--VS 60
           +I+DFG+AR          T        +MAPE   + V++ +SDV+SFGVL+ EI  + 
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 61  GKRNSG------FYLSKDGHSL 76
           G    G      F L K+GH +
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRM 278

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 241

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 4   KISDFGMARIF--GGNQNEANTNRV-VGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LE 57
           +I+DFG++     GG+       +  VGT  +MAPE  ME V  +  K+D++SFG+  +E
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIE 219
Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLK-----YIHI 112
           + +G   +  Y       +L  T         L+   P L+      E+LK     +  +
Sbjct: 220 LATG---AAPYHKYPPMKVLMLT---------LQNDPPSLETGVQDKEMLKKYGKSFRKM 267
Query: 113 GLLCVQEDPARRPSMSSVV 131
             LC+Q+DP +RP+ + ++
Sbjct: 268 ISLCLQKDPEKRPTAAELL 286

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 4   KISDFGMARIF--GGNQNEANTNRV-VGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LE 57
           +I+DFG++     GG+       +  VGT  +MAPE  ME V  +  K+D++SFG+  +E
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIE 214
Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLK-----YIHI 112
           + +G   +  Y       +L  T         L+   P L+      E+LK     +  +
Sbjct: 215 LATG---AAPYHKYPPMKVLMLT---------LQNDPPSLETGVQDKEMLKKYGKSFRKM 262
Query: 113 GLLCVQEDPARRPSMSSVV 131
             LC+Q+DP +RP+ + ++
Sbjct: 263 ISLCLQKDPEKRPTAAELL 281

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 33/141 (23%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+ L E+ S  
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244
Query: 63  R--------NSGFY-LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
                    +S FY + K+G  +L+       E    E+ D                 I 
Sbjct: 245 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 281
Query: 114 LLCVQEDPARRPSMSSVVVML 134
             C   DP +RP+   +V ++
Sbjct: 282 KTCWDADPLKRPTFKQIVQLI 302

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 201

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 217

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 211

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 208

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 213

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV 54
           KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 204

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	8e-60
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-54
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-43
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-38
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-28
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-17
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-15
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-14
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-14
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-14
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-13
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-13
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-13
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-13
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-13
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-12
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-12
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-12
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-12
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-12
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-12
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-12
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	8e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	9e-12
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-11
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-11
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-10
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-10
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-10
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-10
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-09
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-09
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	7e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	7e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	8e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	7e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  187 bits (477), Expect = 8e-60
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIV 59
              KISDFG+AR          T+R+VGT  YMAPE  + G  + KSD++SFGV LLEI+
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEII 228

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALE-LMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           +G         ++   LL    ++  E + +E  +D  +  +     +     +   C+ 
Sbjct: 229 TGLPAVDE--HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLH 285

Query: 119 EDPARRPSMSSVVVMLASDTIT 140
           E   +RP +  V  +L   T +
Sbjct: 286 EKKNKRPDIKKVQQLLQEMTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  175 bits (445), Expect = 1e-54
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 4/141 (2%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVS 60
              + DFG+A++         T  V GT G++APEY   G  S K+DVF +GV LLE+++
Sbjct: 172 EAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 230

Query: 61  GKRN--SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           G+R        + D   LL +   L  E +   L+D  L+ +    E+ + I + LLC Q
Sbjct: 231 GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 290

Query: 119 EDPARRPSMSSVVVMLASDTI 139
             P  RP MS VV ML  D +
Sbjct: 291 SSPMERPKMSEVVRMLEGDGL 311

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  144 bits (366), Expect = 5e-43
 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 3/136 (2%)

Query: 1   MNPKISDFGMARIF-GGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEI 58
             PKI+DFG+++     +Q   +T  V GT GY+ PEY ++G  + KSDV+SFGV L E+
Sbjct: 176 FVPKITDFGISKKGTELDQTHLST-VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           +  +      L ++  +L  +  +    G+  +++DP L        L K+    + C+ 
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294

Query: 119 EDPARRPSMSSVVVML 134
                RPSM  V+  L
Sbjct: 295 LSSEDRPSMGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  132 bits (335), Expect = 2e-38
 Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-----FSIKSDVFSFG-V 54
           +   I+DFG+A  F   ++  +T+  VGT  YMAPE     +       ++ D+++ G V
Sbjct: 168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227

Query: 55  LLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALEL--------MDPVLKQSCVGAEL 106
           L E+ S    +   + +    +L +  ++       ++          PVL+        
Sbjct: 228 LWELASRCTAADGPVDEY---MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAG 284

Query: 107 LK-YIHIGLLCVQEDPARRPSMSSVVVMLAS 136
           +         C   D   R S   V   +  
Sbjct: 285 MAMLCETIEECWDHDAEARLSAGCVGERITQ 315

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  107 bits (269), Expect = 1e-28
 Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 25/172 (14%)

Query: 1   MNPKISDFGMARIFGGN------QNEANTNRVVGTYGYMAPEYAMEGV-------FSIKS 47
               ISDFG++    GN      + +      VGT  YMAPE     V          + 
Sbjct: 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV 216

Query: 48  DVFSFG-VLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMD--------PVLK 98
           D+++ G +  EI     +     S   +  + +  ++       ++          P   
Sbjct: 217 DMYALGLIYWEIFMRCTDLFPGESVPEY-QMAFQTEVGNHPTFEDMQVLVSREKQRPKFP 275

Query: 99  QSCVGAELLKYIHIGLL--CVQEDPARRPSMSSVVVMLASDTITLPPPTQPA 148
           ++     L        +  C  +D   R +       +A   +        +
Sbjct: 276 EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVS 327

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 81.2 bits (201), Expect = 5e-19
 Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+ DFG++R+        ++    GT  +MAPE   +   + KSDV+SFGV+L E+ 
Sbjct: 176 YTVKVCDFGLSRLK--ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALEL---MDPVLKQSCVGAELLKYIHIGLLC 116
           + ++    +      +       +  + + LE+   ++P +      A +++       C
Sbjct: 234 TLQQ---PW---GNLNPAQVVAAVGFKCKRLEIPRNLNPQV------AAIIEG------C 275

Query: 117 VQEDPARRPSMSSVVVMLAS-DTITLPPPTQPAF 149
              +P +RPS ++++ +L       +PPP +   
Sbjct: 276 WTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSDL 309

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 80.0 bits (198), Expect = 9e-19
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 26/135 (19%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI+DFG+AR +      +      G Y +MAPE     +FS  SDV+S+GVLL E+++G+
Sbjct: 156 KITDFGLAREWHRTTKMSAA----GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALEL---MDPVLKQSCVGAELLKYIHIGLLCVQE 119
                +    G   L   + +     AL +              A+L++       C   
Sbjct: 212 V---PF---RGIDGLAVAYGVAMNKLALPIPSTCPEPF------AKLMED------CWNP 253

Query: 120 DPARRPSMSSVVVML 134
           DP  RPS ++++  L
Sbjct: 254 DPHSRPSFTNILDQL 268

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 78.9 bits (195), Expect = 3e-18
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 33/144 (22%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE---YAMEGVFSIKSDVFSFGVLL-EIV 59
           KI DFG+A             ++ G+  +MAPE         +S +SDV++FG++L E++
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219

Query: 60  SGK------RNSG---FYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYI 110
           +G+       N       + +   S      +  C      LM                 
Sbjct: 220 TGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM----------------- 262

Query: 111 HIGLLCVQEDPARRPSMSSVVVML 134
                C+++    RPS   ++  +
Sbjct: 263 ---AECLKKKRDERPSFPRILAEI 283

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 79.3 bits (196), Expect = 3e-18
 Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 43/152 (28%)

Query: 4   KISDFGMARIFGGNQNEANTNR------------VVGTYGYMAPEYAMEGVFSIKSDVFS 51
            ++DFG+AR+    + +    R            VVG   +MAPE      +  K DVFS
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFS 207

Query: 52  FGVLL-EIVSGK--------RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           FG++L EI+           R   F L+  G                   +D     +C 
Sbjct: 208 FGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF------------------LDRYCPPNC- 248

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                 +  I + C   DP +RPS   +   L
Sbjct: 249 ---PPSFFPITVRCCDLDPEKRPSFVKLEHWL 277

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 78.5 bits (194), Expect = 5e-18
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 31/142 (21%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE--YAMEGVFSIKSDVFSFGVLL-E 57
           +  K++DFG+++      +  + + ++G + +MAPE   A E  ++ K+D +SF ++L  
Sbjct: 166 VCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT 220

Query: 58  IVSGKRNSGFYLSKDGHSLL--TYTWKLWCEGEALEL---MDPVLKQSCVGAELLKYIHI 112
           I++G+     +   D +S     +   +  EG    +     P L        +++    
Sbjct: 221 ILTGEG---PF---DEYSYGKIKFINMIREEGLRPTIPEDCPPRL------RNVIE---- 264

Query: 113 GLLCVQEDPARRPSMSSVVVML 134
             LC   DP +RP  S +V  L
Sbjct: 265 --LCWSGDPKKRPHFSYIVKEL 284

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 78.1 bits (193), Expect = 7e-18
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 26/148 (17%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG A        + +     G+  +MAPE      +S K DVFS+G++L E+++ +
Sbjct: 146 KICDFGTACD-----IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALEL---MDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +    +  + G       W +   G    L   +   ++       L+        C  +
Sbjct: 201 K---PF-DEIGGPAFRIMWAV-HNGTRPPLIKNLPKPIE------SLMT------RCWSK 243

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQP 147
           DP++RPSM  +V ++       P   +P
Sbjct: 244 DPSQRPSMEEIVKIMTHLMRYFPGADEP 271

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 76.5 bits (189), Expect = 2e-17
 Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 34/142 (23%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG----VFSIKSDVFSFGVLL 56
           M  +IS   +   F        +   +    ++APE A++          +D++SF VLL
Sbjct: 150 MTARISMADVKFSF-------QSPGRMYAPAWVAPE-ALQKKPEDTNRRSADMWSFAVLL 201

Query: 57  -EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALEL---MDPVLKQSCVGAELLKYIHI 112
            E+V+ +     +      S +    K+  EG    +   + P +      ++L+K    
Sbjct: 202 WELVTREV---PF---ADLSNMEIGMKVALEGLRPTIPPGISPHV------SKLMK---- 245

Query: 113 GLLCVQEDPARRPSMSSVVVML 134
             +C+ EDPA+RP    +V +L
Sbjct: 246 --ICMNEDPAKRPKFDMIVPIL 265

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 38/149 (25%)

Query: 4   KISDFGMARIFGGNQNEANTNR---VVGTYGYMAPE---------YAMEGVFSIKSDVFS 51
            I+DFG+  I G  Q     ++     G   ++APE            +  FS  SDVF+
Sbjct: 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFA 228

Query: 52  FGVLL-EIVSGKR-----NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAE 105
            G +  E+ + +       +   + + G  +     ++    E  +++            
Sbjct: 229 LGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDIL------------ 276

Query: 106 LLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                   L C   +   RP+ + ++ ML
Sbjct: 277 --------LFCWAFEQEERPTFTKLMDML 297

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 72.8 bits (179), Expect = 6e-16
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 26/153 (16%)

Query: 4   KISDFGMARIFGGNQNEANT--NRVVGTYGYMAPE------YAMEGVFSIKSDVFSFGVL 55
            I+D G+A +   + N+ +   N  VGT  YMAPE               + D+++FG++
Sbjct: 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLV 212

Query: 56  L-EIVSGKRNSG--------FYLSKDGHSLLTYTWKLWC-EGEALELMDPVLKQSCVG-- 103
           L E+     ++G        FY             K+ C + +   + +       +   
Sbjct: 213 LWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL 272

Query: 104 AELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS 136
           A+L+K       C  ++P+ R +   +   L  
Sbjct: 273 AKLMKE------CWYQNPSARLTALRIKKTLTK 299

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 70.5 bits (173), Expect = 4e-15
 Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 48/176 (27%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI+DFG+A++   +++      VV   G     + APE   + +FS +SDV+SFGV+L E
Sbjct: 167 KIADFGLAKLLPLDKDYY----VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 222

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG---- 113
           +                   TY  K          M    +     + LL+ +  G    
Sbjct: 223 LF------------------TYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLP 264

Query: 114 -------------LLCVQEDPARRPSMSSVVVML---ASDTITLPPPTQPAFSVGR 153
                         LC    P  RPS S++   L    S +         A   G+
Sbjct: 265 APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGK 320

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 70.1 bits (172), Expect = 7e-15
 Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 16/148 (10%)

Query: 4   KISDFGMARIF--GGNQNEANTNRVVGTYGYMAPE------YAMEGVFSIKSDVFSFGVL 55
            I+D G+A  F    N+ +   N  VGT  YM PE              I +D++SFG++
Sbjct: 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241

Query: 56  L-EIVSGKRNSGFY----LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYI 110
           L E+     + G      L          +++   E   ++ + P         E L+ +
Sbjct: 242 LWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQM 301

Query: 111 HIGLL--CVQEDPARRPSMSSVVVMLAS 136
              L+  C   +PA R +   V   LA 
Sbjct: 302 -GKLMTECWAHNPASRLTALRVKKTLAK 328

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 47/157 (29%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFG+A+              V   G     + APE   E  F   SDV+SFGV L E
Sbjct: 174 KIGDFGLAKAVPEGHEYY----RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229

Query: 58  IVS-GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG--- 113
           +++    +            +                            L + +  G   
Sbjct: 230 LLTHCDSSQSPPTKFLELIGIAQ-------------------GQMTVLRLTELLERGERL 270

Query: 114 --------------LLCVQEDPARRPSMSSVVVMLAS 136
                           C + + + RP+  +++ +L +
Sbjct: 271 PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 67.7 bits (166), Expect = 5e-14
 Identities = 37/147 (25%), Positives = 48/147 (32%), Gaps = 46/147 (31%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-- 60
           KISDFGM+R        A+         + APE    G +S +SDV+SFG+LL E  S  
Sbjct: 253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG 312

Query: 61  -----GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELL 107
                   N         G  L               C      LM              
Sbjct: 313 ASPYPNLSNQQTREFVEKGGRLPCPEL----------CPDAVFRLM-------------- 348

Query: 108 KYIHIGLLCVQEDPARRPSMSSVVVML 134
                   C   +P +RPS S++   L
Sbjct: 349 ------EQCWAYEPGQRPSFSTIYQEL 369

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 67.5 bits (165), Expect = 6e-14
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 18/149 (12%)

Query: 4   KISDFGMARIFGGNQNEANT--NRVVGTYGYMAPEYAMEGV-------FSIKSDVFSFGV 54
            I+D G+A       +  +   N  VGT  YMAPE  ++            ++D+++ G+
Sbjct: 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGL 245

Query: 55  LL-EIVSGKRNSG----FYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKY 109
           +  EI       G    + L          + +   +    + + P +       E L+ 
Sbjct: 246 VFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRV 305

Query: 110 IHIGLL--CVQEDPARRPSMSSVVVMLAS 136
           +   ++  C   + A R +   +   L+ 
Sbjct: 306 M-AKIMRECWYANGAARLTALRIKKTLSQ 333

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 66.9 bits (164), Expect = 7e-14
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 27/145 (18%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFG+ +    ++        V         + APE  M+  F I SDV+SFGV L E
Sbjct: 166 KIGDFGLTKAIETDKEYY----TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 221

Query: 58  IVS-GKRNSGFYLSKDGHSLLTYTWKLWCE-------GEALELMDPVLKQSCVGAELLKY 109
           +++    +S            T+              G+ L         +C   E+  Y
Sbjct: 222 LLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPP-----NC-PDEV--Y 273

Query: 110 IHIGLLCVQEDPARRPSMSSVVVML 134
             +   C +  P+ R S  +++   
Sbjct: 274 -QLMRKCWEFQPSNRTSFQNLIEGF 297

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 65.8 bits (161), Expect = 2e-13
 Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 24/144 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFG+ ++   ++        V   G     + APE   E  FS+ SDV+SFGV+L E
Sbjct: 154 KIGDFGLTKVLPQDKEFF----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMD-------PVLKQSCVGAELLKYI 110
           + +    S    ++    +             +EL+        P     C   E+  Y 
Sbjct: 210 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP---DGC-PDEI--Y- 262

Query: 111 HIGLLCVQEDPARRPSMSSVVVML 134
            I   C   +  +RPS   + + +
Sbjct: 263 MIMTECWNNNVNQRPSFRDLALRV 286

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 65.9 bits (161), Expect = 2e-13
 Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 24/144 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFG+ ++   ++        V   G     + APE   E  FS+ SDV+SFGV+L E
Sbjct: 185 KIGDFGLTKVLPQDKEYY----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 240

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMD-------PVLKQSCVGAELLKYI 110
           + +    S    ++    +             +EL+        P     C   E+  Y 
Sbjct: 241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP---DGC-PDEI--Y- 293

Query: 111 HIGLLCVQEDPARRPSMSSVVVML 134
            I   C   +  +RPS   + + +
Sbjct: 294 MIMTECWNNNVNQRPSFRDLALRV 317

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 58/153 (37%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI+DFG+AR I   +  +  TN     +      +MAPE   + V++ +SDV+SFGVL+ 
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMW 296

Query: 57  EIVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           EI +       G            G  + K  +          C  E   +M        
Sbjct: 297 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN----------CTNELYMMM-------- 338

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                         C    P++RP+   +V  L
Sbjct: 339 ------------RDCWHAVPSQRPTFKQLVEDL 359

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 65.9 bits (161), Expect = 3e-13
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL EI +
Sbjct: 358 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 58/182 (31%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K+SDFG++R+   +     T     T G      + APE      F+  SDV+SFG+++ 
Sbjct: 187 KVSDFGLSRVLEDDPEATYT-----TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW 241

Query: 57  EIVS-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           E+++ G+R              N GF L               C     +LM        
Sbjct: 242 EVMTYGERPYWELSNHEVMKAINDGFRLPTPMD----------CPSAIYQLM-------- 283

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQPAFSVGRMVASSGPF 161
                       + C Q++ ARRP  + +V +L    I  P   +        V+   P 
Sbjct: 284 ------------MQCWQQERARRPKFADIVSIL-DKLIRAPDSLKTLADFDPRVSIRLPS 330

Query: 162 FS 163
            S
Sbjct: 331 TS 332

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 65.0 bits (159), Expect = 4e-13
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 58/153 (37%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI+DFG+AR I   +  +  TN     +      +MAPE   + V++ +SDV+SFGVL+ 
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMW 250

Query: 57  EIVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           EI +       G            G  + K  +          C  E   +M        
Sbjct: 251 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN----------CTNELYMMM-------- 292

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                         C    P++RP+   +V  L
Sbjct: 293 ------------RDCWHAVPSQRPTFKQLVEDL 313

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 65.0 bits (159), Expect = 4e-13
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 13/64 (20%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI DFG+AR I   +      N     +      +MAPE   + V++++SDV+S+G+LL 
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFDCVYTVQSDVWSYGILLW 257

Query: 57  EIVS 60
           EI S
Sbjct: 258 EIFS 261

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 64.6 bits (158), Expect = 4e-13
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 12/63 (19%)

Query: 4   KISDFGMARIFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           K++DFG++R+  G+   A+       +      + APE      FSIKSDV++FGVLL E
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWE 204

Query: 58  IVS 60
           I +
Sbjct: 205 IAT 207

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KI+DFG+AR+   N+  A      G      + APE    G F+IKSDV+SFG+LL EIV
Sbjct: 149 KIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 60  S 60
           +
Sbjct: 205 T 205

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 64.7 bits (158), Expect = 6e-13
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KI+DFG+AR+   N+  A      G      + APE    G F+IKSDV+SFG+LL EIV
Sbjct: 324 KIADFGLARVIEDNEYTARE----GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379

Query: 60  S 60
           +
Sbjct: 380 T 380

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 64.2 bits (157), Expect = 6e-13
 Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 58/162 (35%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFGM+R    +    +  RV G +      +M PE  M   F+ +SDV+SFGV+L E
Sbjct: 173 KIGDFGMSR----DVYSTDYYRV-GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE 227

Query: 58  IVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           I +          N         G  L +             C  E  ++M         
Sbjct: 228 IFTYGKQPWFQLSNTEVIECITQGRVLERPRV----------CPKEVYDVM--------- 268

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPP 144
                      L C Q +P +R ++  +  +L    +    P
Sbjct: 269 -----------LGCWQREPQQRLNIKEIYKIL--HALGKATP 297

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 64.6 bits (158), Expect = 7e-13
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 13/64 (20%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI DFG+AR I   +      N     +      +MAPE   EG+++IKSDV+S+G+LL 
Sbjct: 212 KICDFGLARDIMSDSNYVVRGNARLPVK------WMAPESLFEGIYTIKSDVWSYGILLW 265

Query: 57  EIVS 60
           EI S
Sbjct: 266 EIFS 269

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 44/169 (26%), Positives = 59/169 (34%), Gaps = 61/169 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGY-----MAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFGMAR    +   A+  R  G         M PE  MEG+F+ K+D +SFGVLL E
Sbjct: 183 KIGDFGMAR----DIYRASYYRK-GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237

Query: 58  IVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           I S        K N        SG  +    +          C G    +M         
Sbjct: 238 IFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKN----------CPGPVYRIM--------- 278

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML-----ASDTITLPPPTQ 146
                        C Q  P  RP+ + ++  +       D I    P +
Sbjct: 279 -----------TQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIE 316

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 64.2 bits (157), Expect = 8e-13
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 58/153 (37%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KISDFG++R ++  +     +      +      +MA E   + +++ +SDV+SFGVLL 
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVK------WMAIESLFDHIYTTQSDVWSFGVLLW 243

Query: 57  EIVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           EIV+       G           +G  + +  +          C  E   LM        
Sbjct: 244 EIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN----------CSEEMYRLM-------- 285

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                       L C +++P +RP  + +   L
Sbjct: 286 ------------LQCWKQEPDKRPVFADISKDL 306

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 64.3 bits (157), Expect = 8e-13
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 58/153 (37%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI+DFG+AR I   +  +  TN     +      +MAPE   + +++ +SDV+SFGVLL 
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLW 284

Query: 57  EIVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           EI +       G            G  + K  +          C  E   +M        
Sbjct: 285 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN----------CTNELYMMM-------- 326

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                         C    P++RP+   +V  L
Sbjct: 327 ------------RDCWHAVPSQRPTFKQLVEDL 347

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 63.8 bits (156), Expect = 1e-12
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 13/64 (20%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI DFG+AR I   +      N     +      +MAPE     V++ +SDV+S+G+ L 
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLW 238

Query: 57  EIVS 60
           E+ S
Sbjct: 239 ELFS 242

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 64.5 bits (157), Expect = 1e-12
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL E+ +
Sbjct: 403 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 63.8 bits (156), Expect = 1e-12
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KI DFG+ R    N +             + + APE      FS  SD + FGV L E+ 
Sbjct: 161 KIGDFGLMRALPQNDDHYVMQE--HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218

Query: 60  S 60
           +
Sbjct: 219 T 219

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL E+ +
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 63.4 bits (155), Expect = 1e-12
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFG++R    ++  ++     G+     +  PE  M   FS KSD+++FGVL+ EI 
Sbjct: 160 KVSDFGLSRYVLDDEYTSSV----GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215

Query: 60  S 60
           S
Sbjct: 216 S 216

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 40/187 (21%), Positives = 64/187 (34%), Gaps = 58/187 (31%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFG+ R+   +   A T R  G      + +PE      F+  SDV+S+G++L E++
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

Query: 60  S-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGA 104
           S G+R              + G+ L               C     +LM           
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----------CPAALYQLM----------- 283

Query: 105 ELLKYIHIGLLCVQEDPARRPSMSSVVVML-------ASDTITLPPPTQPAFSVGRMVAS 157
                    L C Q+D   RP    +V +L        S  I      +P+  +      
Sbjct: 284 ---------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNV 334

Query: 158 SGPFFSS 164
               F +
Sbjct: 335 DITTFRT 341

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 58/153 (37%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI+DFG++R I+  +  +A+ N     R      +M PE      ++ +SDV+++GV+L 
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLW 267

Query: 57  EIVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           EI S       G  +         G  L+   +          C  E   LM        
Sbjct: 268 EIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN----------CPLELYNLM-------- 309

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                        LC  + PA RPS  S+  +L
Sbjct: 310 ------------RLCWSKLPADRPSFCSIHRIL 330

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 63.4 bits (155), Expect = 1e-12
 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 12/67 (17%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI+DFG+A++ G  + E +        G     +MA E  +  +++ +SDV+S+GV + E
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEG-----GKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 211

Query: 58  IVS-GKR 63
           +++ G +
Sbjct: 212 LMTFGSK 218

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 13/64 (20%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KI DFG+AR I+         +     +      +MAPE   + V++I+SDV+SFGVLL 
Sbjct: 188 KICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLW 241

Query: 57  EIVS 60
           EI S
Sbjct: 242 EIFS 245

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 13/68 (19%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K+SDFG++R+   + + A T     T G      + APE      FS  SDV+SFGV++ 
Sbjct: 191 KVSDFGLSRVLEDDPDAAYT-----TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245

Query: 57  EIVS-GKR 63
           E+++ G+R
Sbjct: 246 EVLAYGER 253

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFGM R    +Q  ++T    GT     + +PE      +S KSDV+SFGVL+ E+ 
Sbjct: 144 KVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199

Query: 60  S 60
           S
Sbjct: 200 S 200

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 44/169 (26%), Positives = 58/169 (34%), Gaps = 61/169 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGY-----MAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFGMAR    +   A   R  G         M PE  MEG+F+ K+D +SFGVLL E
Sbjct: 224 KIGDFGMAR----DIYRAGYYRK-GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278

Query: 58  IVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           I S        K N        SG  +    +          C G    +M         
Sbjct: 279 IFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKN----------CPGPVYRIM--------- 319

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML-----ASDTITLPPPTQ 146
                        C Q  P  RP+ + ++  +       D I    P +
Sbjct: 320 -----------TQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIE 357

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           K+SDFGM R    +Q  ++     GT     + APE      +S KSDV++FG+L+ E+ 
Sbjct: 144 KVSDFGMTRYVLDDQYVSSV----GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199

Query: 60  S 60
           S
Sbjct: 200 S 200

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 10/60 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGY--MAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K+SDFG+ +       EA++ +  G       APE   E  FS KSDV+SFG+LL EI S
Sbjct: 329 KVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 13/68 (19%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KISDFG+++    ++N                  + APE      FS KSDV+SFGVL+ 
Sbjct: 157 KISDFGLSKALRADENYYKAQT-----HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 211

Query: 57  EIVS-GKR 63
           E  S G++
Sbjct: 212 EAFSYGQK 219

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 56/152 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KISD G+ R        A+  ++          +MAPE  M G FSI SD++S+GV+L E
Sbjct: 168 KISDLGLFR----EVYAADYYKL-LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE 222

Query: 58  IVS-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           + S G +               +   L               C      LM         
Sbjct: 223 VFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDD----------CPAWVYALM--------- 263

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                      + C  E P+RRP    +   L
Sbjct: 264 -----------IECWNEFPSRRPRFKDIHSRL 284

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 36/153 (23%), Positives = 51/153 (33%), Gaps = 56/153 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K++DFG+AR       +     V    G      +MA E      F+ KSDV+SFGVLL 
Sbjct: 168 KVADFGLARDM----YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 223

Query: 57  EIVS-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           E+++ G                  G  L +  +          C     E+M        
Sbjct: 224 ELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY----------CPDPLYEVM-------- 265

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                       L C       RPS S +V  +
Sbjct: 266 ------------LKCWHPKAEMRPSFSELVSRI 286

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 59/152 (38%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI+DFG++R     Q       V  T G     +MA E     V++  SDV+S+GVLL E
Sbjct: 182 KIADFGLSR----GQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233

Query: 58  IVS-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           IVS G                  G+ L K  +          C+ E  +LM         
Sbjct: 234 IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN----------CDDEVYDLM--------- 274

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                        C +E P  RPS + ++V L
Sbjct: 275 -----------RQCWREKPYERPSFAQILVSL 295

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 62.3 bits (152), Expect = 4e-12
 Identities = 38/152 (25%), Positives = 54/152 (35%), Gaps = 56/152 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFGM+R    +    +  RV G        +M PE  +   F+ +SDV+SFGV+L E
Sbjct: 198 KIGDFGMSR----DIYSTDYYRV-GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252

Query: 58  IVS-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           I + GK+                G  L +             C  E   +M         
Sbjct: 253 IFTYGKQPWYQLSNTEAIDCITQGRELERPRA----------CPPEVYAIM--------- 293

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                        C Q +P +R S+  V   L
Sbjct: 294 -----------RGCWQREPQQRHSIKDVHARL 314

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 61.7 bits (150), Expect = 7e-12
 Identities = 36/153 (23%), Positives = 52/153 (33%), Gaps = 56/153 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K++DFG+AR       +   + V    G      +MA E      F+ KSDV+SFGVLL 
Sbjct: 232 KVADFGLARDM----YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 287

Query: 57  EIVS-GKR--------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           E+++ G                  G  L +  +          C     E+M        
Sbjct: 288 ELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY----------CPDPLYEVM-------- 329

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                       L C       RPS S +V  +
Sbjct: 330 ------------LKCWHPKAEMRPSFSELVSRI 350

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 61.1 bits (149), Expect = 8e-12
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 10/60 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGY--MAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K+SDFG+ +       EA++ +  G       APE   E  FS KSDV+SFG+LL EI S
Sbjct: 157 KVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 61.2 bits (149), Expect = 8e-12
 Identities = 42/152 (27%), Positives = 56/152 (36%), Gaps = 56/152 (36%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGY-----MAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI DFGM R    +  E +  R  G  G      M+PE   +GVF+  SDV+SFGV+L E
Sbjct: 178 KIGDFGMTR----DIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 232

Query: 58  IVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCV 102
           I +       G  N         G  L K  +          C     ELM         
Sbjct: 233 IATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN----------CPDMLFELM--------- 273

Query: 103 GAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                       +C Q +P  RPS   ++  +
Sbjct: 274 -----------RMCWQYNPKMRPSFLEIISSI 294

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 61.1 bits (149), Expect = 9e-12
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 13/64 (20%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
            ++DFG+++ I+ G+            +      ++A E   + V++ KSDV++FGV + 
Sbjct: 187 CVADFGLSKKIYSGDYYRQGRIAKMPVK------WIAIESLADRVYTSKSDVWAFGVTMW 240

Query: 57  EIVS 60
           EI +
Sbjct: 241 EIAT 244

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 11/64 (17%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K++DFG+AR       +     V           + A E      F+ KSDV+SFGVLL 
Sbjct: 164 KVADFGLARDI----LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLW 219

Query: 57  EIVS 60
           E+++
Sbjct: 220 ELLT 223

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 58/153 (37%)

Query: 4   KISDFGMAR-IFGGNQNEANTN-----RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
            ++DFG++R I+ G+            +      ++A E   + ++++ SDV++FGV + 
Sbjct: 177 CVADFGLSRKIYSGDYYRQGCASKLPVK------WLALESLADNLYTVHSDVWAFGVTMW 230

Query: 57  EIVS-------GKRN--------SGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSC 101
           EI++       G  N         G  L +             C  E  +LM        
Sbjct: 231 EIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPE----------CMEEVYDLM-------- 272

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVVVML 134
                         C   DP +RPS + + + L
Sbjct: 273 ------------YQCWSADPKQRPSFTCLRMEL 293

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 61.1 bits (148), Expect = 1e-11
 Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 29/141 (20%)

Query: 1   MNPKISDFGMARIFGGNQNEANTN----------RVVGTYGYMAPEYAMEGVFSIKSDVF 50
              K+ DFG+      ++ E                VGT  YM+PE      +S K D+F
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIF 260

Query: 51  SFG-VLLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKY 109
           S G +L E+         Y        +          +       +  Q     +    
Sbjct: 261 SLGLILFEL--------LYSFSTQMERVR-IITDVRNLK----FPLLFTQKY--PQEHMM 305

Query: 110 IHIGLLCVQEDPARRPSMSSV 130
           +      +   P  RP  + +
Sbjct: 306 VQ---DMLSPSPTERPEATDI 323

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+ DFG+ARI   + + A T   VGT  YM+PE      ++ KSD++S G LL E+ +  
Sbjct: 156 KLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
               F       S      K+  EG+   +            EL + I      +     
Sbjct: 214 P--PF----TAFSQKELAGKI-REGKFRRIP------YRYSDELNEIIT---RMLNLKDY 257

Query: 123 RRPSMSSV 130
            RPS+  +
Sbjct: 258 HRPSVEEI 265

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 61.1 bits (148), Expect = 1e-11
 Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 37/143 (25%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS-G 61
           KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI S G
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 292

Query: 62  -------KRNSGFY-LSKDGHSLL--TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIH 111
                  K +  F    K+G  +    Y        E  + M                  
Sbjct: 293 ASPYPGVKIDEEFCRRLKEGTRMRAPDY-----TTPEMYQTM------------------ 329

Query: 112 IGLLCVQEDPARRPSMSSVVVML 134
             L C   +P++RP+ S +V  L
Sbjct: 330 --LDCWHGEPSQRPTFSELVEHL 350

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 14/64 (21%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           K+ DFG++R          +              +M+PE      F+  SDV+ F V + 
Sbjct: 153 KLGDFGLSRYIEDEDYYKAS-------VTRLPIKWMSPESINFRRFTTASDVWMFAVCMW 205

Query: 57  EIVS 60
           EI+S
Sbjct: 206 EILS 209

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 13/68 (19%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG------YMAPEYAMEGVFSIKSDVFSFGVLL- 56
           KISDFG+++  G + +                  + APE      FS +SDV+S+GV + 
Sbjct: 150 KISDFGLSKALGADDSYYTARS-----AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 204

Query: 57  EIVS-GKR 63
           E +S G++
Sbjct: 205 EALSYGQK 212

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K+ DFG++R     ++        G     +MAPE      F+  SDV+ FGV + EI+ 
Sbjct: 156 KLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 11/63 (17%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           KI+DFG+A++ G  + E +        G     +MA E  +  +++ +SDV+S+GV + E
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEG-----GKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 211

Query: 58  IVS 60
           +++
Sbjct: 212 LMT 214

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 60.3 bits (146), Expect = 3e-11
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGT---YGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           KISDFG+++  G + +               + APE      FS +SDV+S+GV + E +
Sbjct: 476 KISDFGLSKALGADDSYYTAR--SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533

Query: 60  S 60
           S
Sbjct: 534 S 534

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 19/128 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           ++ DFG+AR+       A     +GT  Y++PE      ++ KSD+++ G +L E+ + K
Sbjct: 165 QLGDFGIARVLNSTVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
               F       S+     K+   G       PV        +L   +       + +P 
Sbjct: 223 H--AFE----AGSMKNLVLKI-ISGS----FPPV--SLHYSYDLRSLVS---QLFKRNPR 266

Query: 123 RRPSMSSV 130
            RPS++S+
Sbjct: 267 DRPSVNSI 274

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 25/131 (19%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI DFG+       +N+    R  GT  YM+PE      +  + D+++ G++L E++
Sbjct: 159 KQVKIGDFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
                + F    +     T            +L D ++       +    +      + +
Sbjct: 216 HVCD-TAF----ETSKFFT------------DLRDGII-SDIFDKKEKTLLQ---KLLSK 254

Query: 120 DPARRPSMSSV 130
            P  RP+ S +
Sbjct: 255 KPEDRPNTSEI 265

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 11/63 (17%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYG-----YMAPEYAMEGVFSIKSDVFSFGVLL-E 57
           +++DFG+A +   +  +   +            +MA E    G ++ +SDV+S+GV + E
Sbjct: 155 QVADFGVADLLPPDDKQLLYSE-----AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE 209

Query: 58  IVS 60
           +++
Sbjct: 210 LMT 212

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 59.9 bits (145), Expect = 4e-11
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTY--GYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
           K+ DFG++R     ++        G     +MAPE      F+  SDV+ FGV + EI+ 
Sbjct: 531 KLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.1 bits (141), Expect = 9e-11
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 16/128 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+ D G+ R F      A++  +VGT  YM+PE   E  ++ KSD++S G LL E+ + +
Sbjct: 176 KLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
               FY  K     L    K+  + +      P L       EL + ++   +C+  DP 
Sbjct: 234 S--PFYGDKMNLYSLCK--KI-EQCDY-----PPLPSDHYSEELRQLVN---MCINPDPE 280

Query: 123 RRPSMSSV 130
           +RP ++ V
Sbjct: 281 KRPDVTYV 288

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 37/131 (28%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG+    G            G   YMAPE  ++G +   +DVFS G+ +LE+    
Sbjct: 197 KLGDFGLLVELG-TAGAGEV--QEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEVACN- 251

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELM-----DPVLKQ--SCVGAELLKYIHIGLL 115
                              +L   GE  + +      P      S     +L       +
Sbjct: 252 ------------------MELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLV------M 287

Query: 116 CVQEDPARRPS 126
            ++ DP  R +
Sbjct: 288 MLEPDPKLRAT 298

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 33/162 (20%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRV----------VGTYGYMAPEYAMEGVFSIKSDVF 50
              K+ DFG+      ++ E                VGT  YM+PE      +S K D+F
Sbjct: 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF 214

Query: 51  SFGVLL-EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKY 109
           S G++L E++       F            T       +      P+  Q          
Sbjct: 215 SLGLILFELL-----YPF----STQMERVRTLTDVRNLK----FPPLFTQKY--PCEYVM 259

Query: 110 IHIGLLCVQEDPARRPSMSSVVVMLASDTIT-LPPPTQPAFS 150
           +      +   P  RP   ++   + +     L  P +    
Sbjct: 260 VQ---DMLSPSPMERPEAINI---IENAVFEDLDFPGKTVLR 295

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 57.6 bits (139), Expect = 2e-10
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 8/61 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+ D G                + GT G+ APE    G  ++ +D+++ G  L  +    
Sbjct: 221 KLIDLGAVSRINS------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDL 273

Query: 63  R 63
            
Sbjct: 274 P 274

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 18/64 (28%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGY-----MAPEYAMEG-VFSIKSDVFSFGVLL- 56
           K+SD G++                          + PE        ++ +D +SFG  L 
Sbjct: 161 KLSDPGISITVLPKD-----------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLW 209

Query: 57  EIVS 60
           EI S
Sbjct: 210 EICS 213

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+A+          TN V+GT  Y +PE A        +D++S G++L E++ G+
Sbjct: 151 KIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

Query: 63  R 63
            
Sbjct: 210 P 210

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 55.7 bits (135), Expect = 6e-10
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSG 61
           K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G +L E+++G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

Query: 62  KR 63
           + 
Sbjct: 216 EP 217

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 4   KISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAMEGVFSI-------KSDVFSFGV 54
            ISDFG+ +     Q+    N N   GT G+ APE   E              D+FS G 
Sbjct: 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227

Query: 55  LLEIV 59
           +   +
Sbjct: 228 VFYYI 232

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
            + DFG+A      +        VGT  YMAPE   E   + ++D+++   +L E ++G 
Sbjct: 174 YLVDFGIASATTDEKLTQ-LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

Query: 63  R 63
            
Sbjct: 233 P 233

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 54.7 bits (131), Expect = 2e-09
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 17/138 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           +  KI D G A+     +        VGT  Y+APE   +  +++  D +SFG L  E +
Sbjct: 161 LIHKIIDLGYAKELDQGEL-CTE--FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 217

Query: 60  SGKR-------NSGFYLSKDGHSLLTYTWKLWCEGEA---LELMDPVLKQSCVGAELLKY 109
           +G R          ++      S           G       L  P      +  +L ++
Sbjct: 218 TGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERW 277

Query: 110 IHIGLLCVQEDPARRPSM 127
           +   L        +R + 
Sbjct: 278 LQCML---MWHQRQRGTD 292

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 4   KISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEY---AMEGVFSIKSDVFSFGVLLEIV 59
            ISDFG+ +     ++  +  + V GT G++APE      +   +   D+FS G +   V
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYV 222

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 53.0 bits (128), Expect = 6e-09
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 26/130 (20%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE----YAMEGVFSIKSDVFSFGV-LLEI 58
           K+ DFG++   G   ++   +   G   YMAPE       +  +S+KSD++S G+ ++E+
Sbjct: 150 KMCDFGIS---GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

Query: 59  VSGKRNSGFYLSKDGH--SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLC 116
              +    F     G     L        E  +     P L      AE + +      C
Sbjct: 207 AILR----FPYDSWGTPFQQLKQV----VEEPS-----PQLPADKFSAEFVDFTS---QC 250

Query: 117 VQEDPARRPS 126
           ++++   RP+
Sbjct: 251 LKKNSKERPT 260

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.7 bits (127), Expect = 7e-09
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 20/124 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIVSGK 62
           KI D G+A +     + A    V+GT  +MAPE   E       DV++FG  +LE+ + +
Sbjct: 172 KIGDLGLATLK--RASFAKA--VIGTPEFMAPEMYEEKY-DESVDVYAFGMCMLEMATSE 226

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                Y      + +   ++    G       P         E+ + I     C++++  
Sbjct: 227 YP---YSECQNAAQI---YRRVTSGVK-----PASFDKVAIPEVKEIIE---GCIRQNKD 272

Query: 123 RRPS 126
            R S
Sbjct: 273 ERYS 276

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 52.9 bits (127), Expect = 8e-09
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+ DFG++     +   AN+   VGT  YM+PE      +S++SD++S G+ L+E+  G+
Sbjct: 172 KLCDFGVSGQLIDSM--ANSF--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           N +I DFG++  F  ++        +GT  Y+APE  + G +  K DV+S GV+L I
Sbjct: 167 NIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 219

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           N KI DFG++  F  +         +GT  Y+APE  ++  ++ K DV+S GV++
Sbjct: 187 NIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
             KI DFG++ +F   +        +GT  Y+APE  +   +  K DV+S GV+L I
Sbjct: 177 LIKIVDFGLSAVFENQKK---MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFI 229

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFG++  F  N         +GT  Y+APE  + G +  K DV+S GV+L
Sbjct: 164 KIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVIL 212

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 31/143 (21%), Positives = 48/143 (33%), Gaps = 38/143 (26%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-----------YAMEGVFSIKSDVFSF 52
           K+ DFG+A     +      +  VGT  YM PE              +   S KSDV+S 
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225

Query: 53  GVLL-EIVSGK------RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAE 105
           G +L  +  GK       N    L           +    E +  +++    K       
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL----KC------ 275

Query: 106 LLKYIHIGLLCVQEDPARRPSMS 128
                     C++ DP +R S+ 
Sbjct: 276 ----------CLKRDPKQRISIP 288

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 38/143 (26%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-----------YAMEGVFSIKSDVFSF 52
           K+ DFG+A     +      +  VGT  YM PE              +   S KSDV+S 
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206

Query: 53  GVLL-EIVSGK------RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAE 105
           G +L  +  GK       N    L           +    E +  +++            
Sbjct: 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL------------ 254

Query: 106 LLKYIHIGLLCVQEDPARRPSMS 128
                     C++ DP +R S+ 
Sbjct: 255 --------KCCLKRDPKQRISIP 269

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 12/71 (16%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-----------YAMEGVFSIKSDVFSF 52
           K+ DFG+A     +      +  VG   YM PE              +   S KSDV+S 
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253

Query: 53  GVLL-EIVSGK 62
           G +L  +  GK
Sbjct: 254 GCILYYMTYGK 264

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K+  FG+A   G +   A     VGT  +MAPE      +    DV+  GV+L I
Sbjct: 173 KLGGFGVAIQLGESGLVAGG--RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 13/68 (19%)

Query: 2   NPKISDFGMARIF------------GGNQNEANTNRVVGTYGYMAPE-YAMEGVFSIKSD 48
           N KI DFG+A+                  +  N    +GT  Y+A E     G ++ K D
Sbjct: 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213

Query: 49  VFSFGVLL 56
           ++S G++ 
Sbjct: 214 MYSLGIIF 221

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 28/127 (22%), Positives = 43/127 (33%), Gaps = 31/127 (24%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFG-VLLEIVSG 61
           KI D G            +     G   ++A E   E      K+D+F+    ++     
Sbjct: 174 KIGDLGHVTRIS------SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227

Query: 62  KRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQ--SCVGAELLKYIHIGLLCVQE 119
           +      L ++G       W    +G       P + Q  S    ELLK      + +  
Sbjct: 228 EP-----LPRNGDQ-----WHEIRQGRL-----PRIPQVLSQEFTELLK------VMIHP 266

Query: 120 DPARRPS 126
           DP RRPS
Sbjct: 267 DPERRPS 273

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 49.5 bits (118), Expect = 1e-07
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL-EIVSG 61
           +ISD G+A  F   +     +  VGT+GYMAPE   +GV    S D FS G +L +++ G
Sbjct: 332 RISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

Query: 62  KRNSGFYLSK 71
              S F   K
Sbjct: 388 H--SPFRQHK 395

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFG-VLLEIVS 60
           KISDFG ++   G      T    GT  YMAPE   +G   +   +D++S G  ++E+ +
Sbjct: 163 KISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT 220

Query: 61  GKR 63
           GK 
Sbjct: 221 GKP 223

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 12/71 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE--------YAMEGVFSIKSDVFSF 52
              K++DFG AR    ++    +  + GT  Y+ P+           +  +    D++S 
Sbjct: 153 SVYKLTDFGAARELEDDEQ-FVS--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209

Query: 53  GVLL-EIVSGK 62
           GV      +G 
Sbjct: 210 GVTFYHAATGS 220

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KI DFG++  F  N         +GT  Y+APE  + G +  K DV+S GV+L I
Sbjct: 164 KIIDFGLSTCFQQNT---KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYI 214

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K++DFG+A    G Q         GT GY++PE   +  +    D+++ GV+L I
Sbjct: 153 KLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 12/71 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE--------YAMEGVFSIKSDVFSF 52
              K++DFG AR    ++    +  + GT  Y+ P+           +  +    D++S 
Sbjct: 153 SVYKLTDFGAARELEDDEQ-FVS--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209

Query: 53  GVLL-EIVSGK 62
           GV      +G 
Sbjct: 210 GVTFYHAATGS 220

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNR---VVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
            + DFG A     +    +      + GT  +MAPE  M      K D++S   ++L ++
Sbjct: 191 ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250

Query: 60  SGKR 63
           +G  
Sbjct: 251 NGCH 254

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
            I+DFG++++          +   GT GY+APE   +  +S   D +S GV+  I
Sbjct: 149 MITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYI 199

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           +ISD G+A      Q +       GT G+MAPE  +   +    D F+ GV L E+++ +
Sbjct: 329 RISDLGLAVELKAGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 19/139 (13%), Positives = 29/139 (20%), Gaps = 26/139 (18%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM--EGVFSIKSDVFSFGVLL-E 57
               + D       G                Y   E+       F+   + +  G+ +  
Sbjct: 231 GRLMLGDVSALWKVG-----TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285

Query: 58  IVSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHI 112
           +            G   S    SL          G    L D V         L+     
Sbjct: 286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK-------TLIG---- 334

Query: 113 GLLCVQEDPARRPSMSSVV 131
             L    D  RR      +
Sbjct: 335 RFLNF--DRRRRLLPLEAM 351

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 1   MNPKISDFGMARIFGGNQNEANT--NRVVGTYGYMAPE--YAMEGVFSIKSDVFSFGVLL 56
              K+ DFG+++ F    N          GT  ++APE        +  K D +S GVLL
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 47.7 bits (114), Expect = 4e-07
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KI DFG AR+   +     T     T  Y APE   +  +    D++S GV+L  
Sbjct: 149 KIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLNQNGYDESCDLWSLGVILYT 201

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
             KI DFG+A +F  ++   ++    GT  YMAPE   +   + K D++S GV++  
Sbjct: 165 PIKIIDFGLAELFKSDE---HSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYF 217

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
             K+ DFG+A  F   +        VGT  Y++P+  +EG++  + D +S GV++ +
Sbjct: 147 PLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYV 199

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KI+DFG+++I            V GT GY APE      +  + D++S G++  I
Sbjct: 191 KIADFGLSKIVEHQVL---MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYI 242

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 46.9 bits (112), Expect = 7e-07
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K++DFG+A     ++     +   GT GY++PE   +  +S   D+++ GV+L I
Sbjct: 171 KLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 222

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 9/65 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-----YAMEGVFSIKSDVFSFGV-LLE 57
           K+ DFG++   G   ++   +R  G   YMAPE        +  + I++DV+S G+ L+E
Sbjct: 165 KLCDFGIS---GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221

Query: 58  IVSGK 62
           + +G+
Sbjct: 222 LATGQ 226

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 46.9 bits (112), Expect = 7e-07
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE----YAMEGVFSIKSDVFSFGV-LLEI 58
           K+ DFG++   G   +     R  G   YMAPE     A    + ++SDV+S G+ L E+
Sbjct: 166 KLCDFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222

Query: 59  VSGK 62
            +G+
Sbjct: 223 ATGR 226

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           +ISD G+A      Q        VGT GYMAPE      ++   D ++ G LL E+++G+
Sbjct: 326 RISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           +I DFG A+          T     T  ++APE      +    D++S GVLL  
Sbjct: 160 RICDFGFAKQLRAENGLLMT--PCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K+ DFG+A              + GT  ++APE        +++D++S GV+  I
Sbjct: 159 KLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K++DFG+A     ++     +   GT GY++PE   +  +S   D+++ GV+L I
Sbjct: 148 KLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 199

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 7/68 (10%), Positives = 17/68 (25%), Gaps = 7/68 (10%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-----YAMEGVFSIKSDVFSFGVL 55
               ++ F      G +   +   R        A            + +   D ++ G+ 
Sbjct: 248 GGVFLTGFEHLVRDGASA-VSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306

Query: 56  L-EIVSGK 62
           +  I    
Sbjct: 307 IYWIWCAD 314

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFG+AR +   +         GT  ++APE       S  +D++S GV+ 
Sbjct: 229 KIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KI DFG+A              + GT  ++APE        +++D++S GV+  I
Sbjct: 158 KIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KI DFG+A     ++          T  + APE          +D+++ GVL  +
Sbjct: 191 KIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYV 242

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K+ DFG+A              + GT  ++APE        +++D++S GV+  I
Sbjct: 159 KLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K+ DFG+A              + GT  ++APE        +++D++S GV+  I
Sbjct: 152 KLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 203

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V+G 
Sbjct: 170 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL 56
           KI DFGM+R  G          ++GT  Y+APE       +  +D+++ G++ 
Sbjct: 174 KIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI-VSG 61
           K+ DFG+       Q   +     GT  + APE A        +D++S GVL  I +SG
Sbjct: 297 KLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           KI +FG AR         N   +     Y APE     V S  +D++S G L+ +
Sbjct: 144 KIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYV 195

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE---YAMEGVFSIKSDVFSFGVLLEI 58
           KI+DFG ++I G          + GT  Y+APE         ++   D +S GV+L I
Sbjct: 282 KITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 336

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 9/61 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE------YAMEGVFSIKSDVFSFGVLLE 57
           K++DFG +      +       V GT  Y+APE            +  + D++S GV++ 
Sbjct: 164 KLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

Query: 58  I 58
            
Sbjct: 221 T 221

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 9/61 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE------YAMEGVFSIKSDVFSFGVLLE 57
           ++SDFG +      +       + GT GY+APE            +  + D+++ GV+L 
Sbjct: 240 RLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296

Query: 58  I 58
            
Sbjct: 297 T 297

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 28/98 (28%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS------DVFSFGV 54
              K+ DFG A      +         GT  Y APE     V           +++S GV
Sbjct: 167 FTIKLIDFGSAAYL---ERGKLFYTFCGTIEYCAPE-----VLMGNPYRGPELEMWSLGV 218

Query: 55  LL--------------EIVSGKRNSGFYLSKDGHSLLT 78
            L              E V    +  + +SK+  SL++
Sbjct: 219 TLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVS 256

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE---YAMEGVFSIKSDVFSFGVLL 56
           KI+DFG ++I G          + GT  Y+APE         ++   D +S GV+L
Sbjct: 157 KITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K++DFG A+    N           T  Y+APE      +    D++S GV++ I
Sbjct: 171 KLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 221

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 11/62 (17%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIK------SDVFSFGV 54
            N KISDFG+A +F  N  E   N++ GT  Y+APE     +   +       DV+S G+
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-----LLKRREFHAEPVDVWSCGI 196

Query: 55  LL 56
           +L
Sbjct: 197 VL 198

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 11/62 (17%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIK------SDVFSFGV 54
            N KISDFG+A +F  N  E   N++ GT  Y+APE     +   +       DV+S G+
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-----LLKRREFHAEPVDVWSCGI 196

Query: 55  LL 56
           +L
Sbjct: 197 VL 198

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE--YAMEGVFS-IKSDVFSFGVLL 56
            + KI+DFG++  F G+    +    VGT  +MAPE       +FS    DV++ GV L
Sbjct: 174 GHIKIADFGVSNEFKGSDALLSN--TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 8/74 (10%), Positives = 19/74 (25%), Gaps = 18/74 (24%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEY-----------AMEGVFSIKSDV 49
               ++ F      G             + G+  PE                + +   D 
Sbjct: 243 GGVFLTGFEHLVRDG------ARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDA 296

Query: 50  FSFGVLL-EIVSGK 62
           ++ G+++  I    
Sbjct: 297 WALGLVIYWIWCAD 310

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLLEI 58
           K++DFG A+    +    +      T  Y+APE      +    D++S GV++ I
Sbjct: 204 KLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 255

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR---VVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           MN KI+DFG+A      Q +    +   + GT  Y++PE A      ++SDV+S G +  
Sbjct: 149 MNIKIADFGLA-----TQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFY 203

Query: 57  EIVSGK 62
            ++ G+
Sbjct: 204 TLLIGR 209

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 17/70 (24%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-------IKSDVFSFG 53
              K+SDFG +      +         GTY +M PE      FS        K D++S G
Sbjct: 189 GRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPE-----FFSNESSYNGAKVDIWSLG 239

Query: 54  VLL-EIVSGK 62
           + L  +    
Sbjct: 240 ICLYVMFYNV 249

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K++DFG+A      Q + NT   VGT  +MAPE   +  +  K+D++S G+  +E+  G+
Sbjct: 159 KLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 10/65 (15%)

Query: 4   KISDFGMARIFGGNQNEANTNR-----VVGTYGYMAPE-----YAMEGVFSIKSDVFSFG 53
           KI DF +      N + +  +        G+  YMAPE          ++  + D++S G
Sbjct: 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213

Query: 54  VLLEI 58
           V+L I
Sbjct: 214 VILYI 218

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 34/187 (18%), Positives = 58/187 (31%), Gaps = 51/187 (27%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR----------VVGTYGYMAPE-YAMEGVFSI--KS 47
              K+ DFG A       + + + +             T  Y  PE   +   F I  K 
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234

Query: 48  DVFSFGVLL-EIVSGKRNSGFYLSKDGHSLL-----TYTWKLWCEGEALELMDPVLKQSC 101
           D+++ G +L  +   +    F    +  + L      Y+              P   Q  
Sbjct: 235 DIWALGCILYLLCFRQ--HPF----EDGAKLRIVNGKYSIP------------PHDTQYT 276

Query: 102 VGAELLKYIHIGLLCVQEDPARRPSMSSVV----VMLASDTITLPPPTQPAFS----VGR 153
           V   L++        +Q +P  R S++ VV     + A+  +    P           G 
Sbjct: 277 VFHSLIRA------MLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGS 330

Query: 154 MVASSGP 160
              S GP
Sbjct: 331 ATLSRGP 337

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 17/69 (24%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKS--------DVFSFGVL 55
            I+DF +A +      +  T  + GT  YMAPE     +FS +         D +S GV 
Sbjct: 155 HITDFNIAAMLPRE-TQITT--MAGTKPYMAPE-----MFSSRKGAGYSFAVDWWSLGVT 206

Query: 56  L-EIVSGKR 63
             E++ G+R
Sbjct: 207 AYELLRGRR 215

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 45/167 (26%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVV-------GTYGYMAPE------YAMEGVFSIKS 47
             P + D G       +   +     +        T  Y APE      + +      ++
Sbjct: 171 GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE---RT 227

Query: 48  DVFSFGVLL-EIVSGKRNSGF-YLSKDGHSLL-----TYTWKLWCEGEALELMDPVLKQS 100
           DV+S G +L  ++ G+    +  + + G S+        +                L Q 
Sbjct: 228 DVWSLGCVLYAMMFGE--GPYDMVFQKGDSVALAVQNQLSIPQSPR------HSSALWQ- 278

Query: 101 CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQP 147
                LL         +  DP +RP +  ++  L +  +  P P Q 
Sbjct: 279 -----LLNS------MMTVDPHQRPHIPLLLSQLEA--LQPPAPGQH 312

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 8/60 (13%), Positives = 17/60 (28%), Gaps = 1/60 (1%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
            + D G +                 T G+   E      ++ + D F     +  ++ G 
Sbjct: 223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)

Query: 4   KISDFGMARIFGGNQNEAN---TNRVVGTYGYMAPE 36
           K++DFG+AR F   +N      TNRVV T  Y  PE
Sbjct: 164 KLADFGLARAFSLAKNSQPNRYTNRVV-TLWYRPPE 198

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K++DFG+A        + NT  V+GT  +MAPE   E  ++  +D++S G+  +E+  GK
Sbjct: 165 KLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 29/97 (29%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIK------SDVFSFGV 54
              K+ DFG   +              GT  Y  PE                + V+S G+
Sbjct: 187 GELKLIDFGSGALLKDT----VYTDFDGTRVYSPPE-----WIRYHRYHGRSAAVWSLGI 237

Query: 55  LL--------------EIVSGKRNSGFYLSKDGHSLL 77
           LL              EI+ G+      +S +   L+
Sbjct: 238 LLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLI 274

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K++DFG        Q++ +T  +VGT  +MAPE      +  K D++S G+  +E++ G+
Sbjct: 156 KLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 34/105 (32%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS------IKSDVFSFGV 54
           MN KI+DFG +  F         +   G   Y APE     +F        + DV+S GV
Sbjct: 151 MNIKIADFGFSNEFTVGGKL---DAFCGAPPYAAPE-----LFQGKKYDGPEVDVWSLGV 202

Query: 55  LL--------------------EIVSGKRNSGFYLSKDGHSLLTY 79
           +L                     ++ GK    FY+S D  +LL  
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKR 247

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR---VVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           +  KI DFG+A      + E +  R   + GT  Y+APE   +   S + DV+S G ++ 
Sbjct: 178 LEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 232

Query: 57  EIVSGK 62
            ++ GK
Sbjct: 233 TLLVGK 238

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR---VVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
           +  KI DFG+A      + E +  R   + GT  Y+APE   +   S + DV+S G ++ 
Sbjct: 152 LEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 206

Query: 57  EIVSGK 62
            ++ GK
Sbjct: 207 TLLVGK 212

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR---VVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL- 56
              KI+DFG +         A ++R   + GT  Y+ PE     +   K D++S GVL  
Sbjct: 146 GELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198

Query: 57  EIVSGK 62
           E + GK
Sbjct: 199 EFLVGK 204

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV-LLEIVSGK 62
           K+SDFG       +  +  +  +VGT  +MAPE     +++ + D++S G+ ++E+V G+
Sbjct: 181 KLSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 38.7 bits (90), Expect = 4e-04
 Identities = 22/160 (13%), Positives = 42/160 (26%), Gaps = 37/160 (23%)

Query: 4   KISDFGMARIFGGNQNEANT-----NRVVGTYGYMAPEYAMEGV--FSIKSDVFSFG--- 53
            +S          +              V    +++PE   + +  +  KSD++S G   
Sbjct: 168 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 227

Query: 54  -----------------VLLEIVSGK------RNSGFYLSKDGHSLLTYTWKLWCEGEAL 90
                            +LLE ++G        ++            +       +    
Sbjct: 228 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT 287

Query: 91  ELMDPVLKQSCVGAELLKY----IHIGLLCVQEDPARRPS 126
               P    S        +     H    C+Q +P  RPS
Sbjct: 288 STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 29/94 (30%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIK------SDVFSFGVLL- 56
           K+ DFG   +              GT  Y  PE       S        + V+S G+LL 
Sbjct: 180 KLIDFGSGALLHDE----PYTDFDGTRVYSPPE-----WISRHQYHALPATVWSLGILLY 230

Query: 57  -------------EIVSGKRNSGFYLSKDGHSLL 77
                        EI+  + +   ++S D  +L+
Sbjct: 231 DMVCGDIPFERDQEILEAELHFPAHVSPDCCALI 264

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEY---AMEGVFSIKSDVFSFG-VLLEIV 59
           K+ DFG A+      +E +   +   + Y APE    A E  ++   D++S G V  E++
Sbjct: 182 KLCDFGSAKKL--IPSEPSVAYICSRF-YRAPELMLGATE--YTPSIDLWSIGCVFGELI 236

Query: 60  SGK 62
            GK
Sbjct: 237 LGK 239

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE 36
           K+ DFG+AR F G      ++ VV T  Y AP+
Sbjct: 148 KLGDFGLARAF-GIPVNTFSSEVV-TLWYRAPD 178

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 37.9 bits (89), Expect = 9e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPE 36
           K+++FG+AR F G      +  VV T  Y  P+
Sbjct: 141 KLANFGLARAF-GIPVRCYSAEVV-TLWYRPPD 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.9
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.9
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.9
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.88
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.87
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.86
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.85
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.84
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.84
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.83
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.83
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.83
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.81
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.79
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.78
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.77
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.77
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.76
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.75
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.75
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.75
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.74
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.74
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.74
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.74
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.74
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.74
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.73
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.73
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.72
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.72
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.71
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.71
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.71
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.71
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.71
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.71
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.71
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.71
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.71
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.7
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.7
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.7
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.7
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.7
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.7
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.7
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.7
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.7
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.69
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.69
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.69
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.69
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.69
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.69
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.69
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.68
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.68
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.68
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.68
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.68
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.68
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.68
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.68
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.68
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.68
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.67
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.67
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.67
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.67
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.67
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.67
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.67
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.67
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.67
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.67
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.67
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.67
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.67
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.67
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.67
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.67
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.66
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.66
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.66
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.66
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.66
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.66
3niz_A	311	Rhodanese family protein; structural genomics, str	99.66
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.66
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.66
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.65
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.65
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.65
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.65
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.65
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.65
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.65
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.65
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.65
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.65
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.65
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.65
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.65
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.65
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.65
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.65
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.64
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.64
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.64
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.64
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.64
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.64
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.64
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.64
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.64
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.64
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.64
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.64
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.64
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.64
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.63
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.63
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.63
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.63
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.63
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.63
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.63
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.63
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.63
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.63
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.63
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.63
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.63
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.63
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.63
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.63
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.63
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.63
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.62
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.62
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.62
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.62
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.62
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.62
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.62
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.62
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.62
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.62
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.62
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.62
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.62
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.62
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.62
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.61
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.61
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.61
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.61
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.61
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.61
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.61
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.61
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.61
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.61
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.61
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.61
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.61
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.61
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.61
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.61
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.61
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.61
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.61
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.61
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.61
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.61
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.61
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.61
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.6
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.6
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.6
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.6
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.6
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.6
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.6
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.6
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.6
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.6
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.6
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.6
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.6
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.6
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.59
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.59
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.59
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.59
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.59
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.59
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.59
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.59
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.59
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.59
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.58
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.58
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.58
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.58
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.58
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.58
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.58
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.58
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.58
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.58
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.58
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.58
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.58
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.58
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.58
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.57
3bhy_A	283	Death-associated protein kinase 3; death associate	99.57
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.57
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.57
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.57
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.57
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.56
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.56
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.56
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.56
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.56
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.56
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.56
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.56
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.56
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.55
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.55
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.54
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.54
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.53
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.53
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.52
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.51
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.51
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.51
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.46
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.34
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.25
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.06
3uqc_A	286	Probable conserved transmembrane protein; structur	98.72
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.68
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	96.99

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.90  E-value=1.2e-25  Score=168.45  Aligned_cols=121  Identities=28%  Similarity=0.355  Sum_probs=86.3

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      +++||+|||+++..............+||+.|+|||++.+..|+.++|||||||+ ||+++ |..||...   .   ...
T Consensus       182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~---~---~~~  255 (308)
T 4gt4_A          182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY---S---NQD  255 (308)
T ss_dssp             GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC---C---HHH
T ss_pred             CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC---C---HHH
Confidence            3689999999986543222222344678999999999999999999999999987 89998 77786432   1   111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ..........         .+..+..++.+|+.+||+.||++||||.||+++|+..
T Consensus       256 ~~-~~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          256 VV-EMIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HH-HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HH-HHHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            11 1122221111         1222334688999999999999999999999999865

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.90  E-value=1e-25  Score=171.54  Aligned_cols=122  Identities=29%  Similarity=0.373  Sum_probs=87.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+|+..............+||+.|+|||++.+..|+.++|||||||+ ||+++ |..||....  ....+   
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~--~~~~~---  297 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--IDEEF---  297 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC--CSHHH---
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC--HHHHH---
Confidence            689999999987654444444455688999999999999999999999999987 89997 788874321  11111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                       ......+....         .+.....++.+++.+||+.||++|||+.||++||+++.
T Consensus       298 -~~~i~~g~~~~---------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          298 -CRRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             -HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -HHHHHcCCCCC---------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence             11122211111         11222346889999999999999999999999998653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=1.4e-24  Score=162.36  Aligned_cols=129  Identities=22%  Similarity=0.320  Sum_probs=83.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+|+..............+||+.|+|||++.+   ..|+.++|||||||+ ||+++|+.||...   ....  
T Consensus       170 ~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~---~~~~--  244 (307)
T 3omv_A          170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI---NNRD--  244 (307)
T ss_dssp             EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC---CCHH--
T ss_pred             cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC---ChHH--
Confidence            689999999986543323333345689999999999864   358899999999987 9999999997422   1111  


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                       ...........    .+.+. ..+..+..++.+|+.+||+.||++|||+.||+.+|+.+...+
T Consensus       245 -~~~~~~~~~~~----~p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          245 -QIIFMVGRGYA----SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             -HHHHHHHTTCC----CCCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             -HHHHHHhcCCC----CCCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence             11111111111    11110 112223346889999999999999999999999998775543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.90  E-value=2e-25  Score=168.67  Aligned_cols=123  Identities=28%  Similarity=0.273  Sum_probs=80.0

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      +++||+|||+++...............||+.|+|||++.+..|+.++|||||||+ ||+++ |+.||...   .   ...
T Consensus       195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~---~---~~~  268 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL---S---NTE  268 (329)
T ss_dssp             TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS---C---HHH
T ss_pred             CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC---C---HHH
Confidence            4689999999986543333323344679999999999999999999999999987 89998 78887422   1   111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .... ...+...         ..+..+..++.+|+.+||+.||++|||+.||+++|+.+..
T Consensus       269 ~~~~-i~~g~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          269 AIDC-ITQGREL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHHH-HHHTCCC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHH-HHcCCCC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            1111 1111111         1112233468899999999999999999999999998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.88  E-value=7.7e-25  Score=163.41  Aligned_cols=123  Identities=24%  Similarity=0.268  Sum_probs=86.8

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      +++||+|||+++...............||+.|+|||++.+..|+.++|||||||+ ||+++ |+.||...   .   ..+
T Consensus       165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~---~---~~~  238 (299)
T 4asz_A          165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL---S---NNE  238 (299)
T ss_dssp             GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS---C---HHH
T ss_pred             CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC---C---HHH
Confidence            3689999999986533222222334568999999999999999999999999987 89998 78887432   1   111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ... ....+....         .+.....++.+|+.+||+.||++|||+.||+..|+++..
T Consensus       239 ~~~-~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          239 VIE-CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             HHH-HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHH-HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            111 112221111         112233468899999999999999999999999987643

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.87  E-value=3.6e-23  Score=156.24  Aligned_cols=124  Identities=18%  Similarity=0.139  Sum_probs=84.2

Q ss_pred             CceeeceecceeecCCCC---cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQN---EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~---~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++.......   ......++||+.|+|||++.+..|+.++||||+||+ +++++|+.||....   ...+.
T Consensus       189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~---~~~~~  265 (336)
T 4g3f_A          189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF---RGPLC  265 (336)
T ss_dssp             CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC---CSCCH
T ss_pred             EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC---HHHHH
Confidence            589999999987643221   112234689999999999999999999999999987 89999999985322   11221


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ..+   .......    .    ..+......+.+|+.+||+.||++|||+.||+++|.....
T Consensus       266 ~~i---~~~~~~~----~----~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          266 LKI---ASEPPPI----R----EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             HHH---HHSCCGG----G----GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHH---HcCCCCc----h----hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            111   1111000    0    1112223468889999999999999999999999876543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.87  E-value=8e-23  Score=152.95  Aligned_cols=134  Identities=21%  Similarity=0.235  Sum_probs=85.5

Q ss_pred             CCceeeceecceeecCCCCcc--cccccccCCCccCccccccC------ccCcccceeehhHH-HHHHhcCCCCCCCcCC
Q 041917            1 MNPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEG------VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK   71 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~------~~~~~~diws~gv~-~~~~~g~~~~~~~~~~   71 (181)
                      +++||+|||+++.........  .....+||+.|+|||++.+.      .++.++|||||||+ ||+++|..++......
T Consensus       145 ~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~  224 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence            468999999998764433221  22345799999999998653      46788999999987 9999998765432111


Q ss_pred             C--------CcchHHHHHHHHhcCCcccccCcccccCC-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           72 D--------GHSLLTYTWKLWCEGEALELMDPVLKQSC-VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        72 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .        ...............    .+++.++... .......+.+|+.+||+.||++||||.||++.|+++.
T Consensus       225 ~~p~~~~~~~~~~~~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          225 QLPYYDLVPSDPSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccchhcccccchHHHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            1        011111222222222    1222222221 2245567889999999999999999999999998764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.86  E-value=2.7e-22  Score=148.92  Aligned_cols=116  Identities=21%  Similarity=0.309  Sum_probs=80.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+|+....    ....+.+||+.|+|||++.+ .|+.++||||+||+ +++++|+.||...     ..... .
T Consensus       170 ~vKl~DFGla~~~~~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-----~~~~~-~  238 (290)
T 3fpq_A          170 SVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-----QNAAQ-I  238 (290)
T ss_dssp             CEEECCTTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-----SSHHH-H
T ss_pred             CEEEEeCcCCEeCCC----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CcHHH-H
Confidence            589999999975322    22345689999999998865 59999999999987 9999999997421     11111 1


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ...........    ....    ....++.+|+.+||+.||++|||+.|+++|-+-
T Consensus       239 ~~~i~~~~~~~----~~~~----~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~  286 (290)
T 3fpq_A          239 YRRVTSGVKPA----SFDK----VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             HHHHTTTCCCG----GGGG----CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHcCCCCC----CCCc----cCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            11221111111    1111    112357889999999999999999999998653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.85  E-value=5.1e-22  Score=150.46  Aligned_cols=119  Identities=19%  Similarity=0.197  Sum_probs=84.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .....+.+||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       208 ~vKl~DFGla~~~~~~--~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~  279 (346)
T 4fih_A          208 RVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAM  279 (346)
T ss_dssp             CEEECCCTTCEECCSS--SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHH
T ss_pred             CEEEecCcCceecCCC--CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHH
Confidence            6899999999875432  222345789999999999999999999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ........ +      ........++.+|+.+||..||++|||+.|+++|-+-
T Consensus       280 ~~-i~~~~~~~-~------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~  327 (346)
T 4fih_A          280 KM-IRDNLPPR-L------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL  327 (346)
T ss_dssp             HH-HHHSSCCC-C------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             HH-HHcCCCCC-C------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            11 11111100 0      0111223468899999999999999999999998654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.84  E-value=1.4e-21  Score=151.45  Aligned_cols=119  Identities=22%  Similarity=0.243  Sum_probs=84.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+|+.....  .....+.+||+.|||||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       285 ~vKl~DFGla~~~~~~--~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~  356 (423)
T 4fie_A          285 RVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAM  356 (423)
T ss_dssp             CEEECCCTTCEECCSS--CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHH
T ss_pred             CEEEecCccceECCCC--CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHH
Confidence            6899999999875432  223345789999999999999999999999999987 9999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ... .....     +.+.  .......++.+|+.+||..||++|||+.|+++|-+-
T Consensus       357 ~~i-~~~~~-----~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~  404 (423)
T 4fie_A          357 KMI-RDNLP-----PRLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL  404 (423)
T ss_dssp             HHH-HHSCC-----CCCS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             HHH-HcCCC-----CCCc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHh
Confidence            111 11111     0010  011122468899999999999999999999998554

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.84  E-value=5.6e-21  Score=143.66  Aligned_cols=138  Identities=28%  Similarity=0.446  Sum_probs=105.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++...............|+..|+|||.+.+..++.++|||++|++ +++++|+.|+.............+.
T Consensus       177 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~  256 (321)
T 2qkw_B          177 VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA  256 (321)
T ss_dssp             CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHT
T ss_pred             CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHh
Confidence            589999999986432222222233468899999999988889999999999987 8999999998655444444454444


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ............+++.+...........+.+++.+||+.||++|||+.||+++|+.+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            44444455555666666666777888899999999999999999999999999987643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.83  E-value=3.7e-22  Score=151.40  Aligned_cols=115  Identities=21%  Similarity=0.308  Sum_probs=82.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....  ........+||+.|+|||++.+..|+.++||||+||+ +++++|+.||...      ......
T Consensus       163 ~vKl~DFGla~~~~~--~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~  234 (350)
T 4b9d_A          163 TVQLGDFGIARVLNS--TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLV  234 (350)
T ss_dssp             CEEECSTTEESCCCH--HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHH
T ss_pred             CEEEcccccceeecC--CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHH
Confidence            689999999986421  1122345689999999999999999999999999987 8999999998431      222222


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ..... .....     +.    .....++.+|+.+||+.||++|||+.|+++|-
T Consensus       235 ~~i~~-~~~~~-----~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp  278 (350)
T 4b9d_A          235 LKIIS-GSFPP-----VS----LHYSYDLRSLVSQLFKRNPRDRPSVNSILEKG  278 (350)
T ss_dssp             HHHHH-TCCCC-----CC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred             HHHHc-CCCCC-----CC----ccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            22221 11111     11    11234688999999999999999999999873

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.83  E-value=1.1e-21  Score=146.55  Aligned_cols=112  Identities=21%  Similarity=0.247  Sum_probs=81.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+|+............+++||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~  243 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG------NEGLIF  243 (311)
T ss_dssp             CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            689999999997654434444556799999999999999999999999999987 8999999998421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSV  130 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev  130 (181)
                      .. ...... .+.+         ....++.+|+.+||..||++|||+.|+
T Consensus       244 ~~-i~~~~~-~~p~---------~~s~~~~dli~~lL~~dp~~R~t~~e~  282 (311)
T 4aw0_A          244 AK-IIKLEY-DFPE---------KFFPKARDLVEKLLVLDATKRLGCEEM  282 (311)
T ss_dssp             HH-HHHTCC-CCCT---------TCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred             HH-HHcCCC-CCCc---------ccCHHHHHHHHHHccCCHhHCcChHHH
Confidence            11 111111 1111         122467889999999999999999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.83  E-value=4.7e-21  Score=141.18  Aligned_cols=115  Identities=20%  Similarity=0.166  Sum_probs=73.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+|+....   .....+.+||+.|+|||++.+..| +.++||||+||+ +++++|+.||...      .....
T Consensus       150 ~vkl~DFGla~~~~~---~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~------~~~~~  220 (275)
T 3hyh_A          150 NVKIADFGLSNIMTD---GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE------SIPVL  220 (275)
T ss_dssp             CEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHH
T ss_pred             CEEEeecCCCeecCC---CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC------CHHHH
Confidence            689999999986432   222345689999999999988876 478999999987 8999999997421      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ....... .+     ..    ....++.+|+.+||+.||++|||+.|+++|-+-
T Consensus       221 ~~-~i~~~~~-~~-----p~----~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~  266 (275)
T 3hyh_A          221 FK-NISNGVY-TL-----PK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF  266 (275)
T ss_dssp             HH-HHHHTCC-CC-----CT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred             HH-HHHcCCC-CC-----CC----CCCHHHHHHHHHHccCChhHCcCHHHHHcCccc
Confidence            11 1111111 11     11    122467889999999999999999999998543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.81  E-value=1.2e-20  Score=140.84  Aligned_cols=116  Identities=20%  Similarity=0.201  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+|+.....  .....+.+||+.|+|||++.+..|+.++||||+||+ +++++|+.||...      ......
T Consensus       164 ~vKl~DFGla~~~~~~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~  235 (304)
T 3ubd_A          164 HIKLTDFGLSKESIDH--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK------DRKETM  235 (304)
T ss_dssp             CEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEecccccceeccCC--CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc------CHHHHH
Confidence            5899999999864322  122345789999999999999999999999999987 8999999998421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L~~  136 (181)
                      .... .... .+         +.....++.+|+.+||+.||++|||+     .|+++|-+-
T Consensus       236 ~~i~-~~~~-~~---------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f  285 (304)
T 3ubd_A          236 TMIL-KAKL-GM---------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF  285 (304)
T ss_dssp             HHHH-HCCC-CC---------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred             HHHH-cCCC-CC---------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence            1111 1111 11         11123468899999999999999984     789987543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.79  E-value=8.1e-20  Score=137.48  Aligned_cols=137  Identities=36%  Similarity=0.561  Sum_probs=99.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCc--CCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYL--SKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~--~~~~~~~~~   78 (181)
                      ++||+|||+++....... .......|+..|+|||.+.+..++.++||||+|++ +++++|..|+....  .........
T Consensus       172 ~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  250 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD  250 (326)
T ss_dssp             CEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred             CEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence            689999999986543222 22233568999999999988889999999999987 89999999974221  112222333


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      +..............+..+...........+.+++.+||+.||++|||+.||+++|+....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            3333333334444555556666777888899999999999999999999999999997543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.78  E-value=7.6e-21  Score=141.90  Aligned_cols=117  Identities=21%  Similarity=0.238  Sum_probs=70.7

Q ss_pred             CceeeceecceeecCCCCc----------ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQNE----------ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~----------~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      ++||+|||+++........          ....+.+||+.|+|||++.+..|+.++||||+||+ +++++   ||...  
T Consensus       156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--  230 (299)
T 4g31_A          156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--  230 (299)
T ss_dssp             CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--
T ss_pred             cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--
Confidence            5899999999865432111          11234689999999999999999999999999987 88874   44210  


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                         ...... ..........    +     ..........+|+.+||+.||++|||+.|+++|-.-
T Consensus       231 ---~~~~~~-~~~~~~~~~p----~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~  283 (299)
T 4g31_A          231 ---MERVRT-LTDVRNLKFP----P-----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF  283 (299)
T ss_dssp             ---HHHHHH-HHHHHTTCCC----H-----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             ---cHHHHH-HHHHhcCCCC----C-----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence               000010 1111111110    1     111223356789999999999999999999997543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.77  E-value=1.4e-19  Score=136.26  Aligned_cols=133  Identities=21%  Similarity=0.223  Sum_probs=87.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||+++...............|+..|+|||++.+     ..++.++||||+|++ +++++|+.||..........
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~  248 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP  248 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence            689999999987654333333344578999999999876     346678899999987 89999999875433222111


Q ss_pred             hHH---------HHHHHHhcCCcccccCcccccC-CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           76 LLT---------YTWKLWCEGEALELMDPVLKQS-CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        76 ~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ...         ...........    .+.+... .......++.+|+.+||+.||++|||+.||++.|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          249 FEEEIGQHPSLEDMQEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhhccCCchhhhhhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            111         11111111111    1111111 12244566899999999999999999999999998764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.77  E-value=1.8e-19  Score=139.30  Aligned_cols=133  Identities=17%  Similarity=0.129  Sum_probs=82.6

Q ss_pred             CceeeceecceeecCCC--CcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQ--NEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~--~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++......  ......+.+||+.|+|||++.+.. |+.++||||+||+ +++++|+.||...   ......
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~---~~~~~l  272 (398)
T 4b99_A          196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK---NYVHQL  272 (398)
T ss_dssp             CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS---SHHHHH
T ss_pred             CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC---CHHHHH
Confidence            58999999998653221  122234578999999999988754 6889999999987 8999999998432   111122


Q ss_pred             HHHHHHHhcCCcccc--------------cCcccccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCEGEALEL--------------MDPVLKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~--------------~~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ..+............              +.+.....   .......++.+|+.+||..||++|||+.|+++|-.-.
T Consensus       273 ~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  349 (398)
T 4b99_A          273 QLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA  349 (398)
T ss_dssp             HHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGT
T ss_pred             HHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhC
Confidence            211111111100000              00000000   0011134678999999999999999999999996653

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.76  E-value=6.8e-19  Score=130.67  Aligned_cols=132  Identities=12%  Similarity=0.060  Sum_probs=88.4

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........     .......|+..|+|||.+.+..++.++||||+|++ +++++|..|+..........
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  228 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  228 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence            3899999999876433221     11234578999999999998889999999999987 89999999985432222111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      ................     +..    ....++.+++.+||+.||++||++.+|++.|+++.....
T Consensus       229 ~~~~~~~~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          229 KYERIGEKKQSTPLRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             HHHHHHHHHHHSCHHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhhccCccHHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence            1111111111111100     011    112368899999999999999999999999988755443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.75  E-value=6.1e-19  Score=134.80  Aligned_cols=65  Identities=26%  Similarity=0.341  Sum_probs=48.6

Q ss_pred             CceeeceecceeecCCCC--------------------------cccccccccCCCccCccccccC-ccCcccceeehhH
Q 041917            2 NPKISDFGMARIFGGNQN--------------------------EANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGV   54 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~--------------------------~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv   54 (181)
                      ++||+|||+|+.......                          .......+||+.|+|||++.+. .|+.++||||+||
T Consensus       156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            479999999986432111                          0112345799999999999775 4888999999999


Q ss_pred             H-HHHHhcCCCCC
Q 041917           55 L-LEIVSGKRNSG   66 (181)
Q Consensus        55 ~-~~~~~g~~~~~   66 (181)
                      + +++++|+.||.
T Consensus       236 il~ell~G~~Pf~  248 (361)
T 4f9c_A          236 IFLSLLSGRYPFY  248 (361)
T ss_dssp             HHHHHHHTCSSSS
T ss_pred             HHHHHHHCCCCCC
Confidence            7 89999999974

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.75  E-value=5.6e-19  Score=142.36  Aligned_cols=119  Identities=18%  Similarity=0.130  Sum_probs=83.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.+...   ......+||+.|+|||++.+..|+.++||||+||+ ++|++|..||...      ......
T Consensus       295 ~vKl~DFG~a~~~~~~---~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~------~~~~~~  365 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE------NDDETL  365 (573)
T ss_dssp             CEEECCCSSCEECCTT---SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHH
T ss_pred             CEEEeeccceeEccCC---CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHH
Confidence            5799999999876432   22345689999999999999999999999999987 8999999997432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ...... .+..+.     ......++.+|+.+||..||.+|||+.|+++|-+-
T Consensus       366 ~~-i~~~~~-~~~~~~-----~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~  414 (573)
T 3uto_A          366 RN-VKSCDW-NMDDSA-----FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL  414 (573)
T ss_dssp             HH-HHTTCC-CCCSGG-----GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             HH-HHhCCC-CCCccc-----ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCc
Confidence            11 111111 111111     11123467899999999999999999999998653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.75  E-value=2.2e-18  Score=127.79  Aligned_cols=131  Identities=14%  Similarity=0.078  Sum_probs=89.3

Q ss_pred             CceeeceecceeecCCCCcc-----cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEA-----NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-----~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++.........     ......|+..|+|||.+.+..++.++||||+|++ +++++|+.|+..........
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 3uzp_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence            58999999998754332211     1234578999999999998889999999999987 89999999986543333222


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      ..............     +.+...+    ...+.+++.+||+.||++||++.+|++.|+++....
T Consensus       226 ~~~~~~~~~~~~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          226 KYERISEKKMSTPI-----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHHHHHHHSCH-----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hhhhhcccccCCch-----HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            22222211111110     0011111    235888999999999999999999999998765543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.74  E-value=2.5e-19  Score=137.43  Aligned_cols=121  Identities=28%  Similarity=0.322  Sum_probs=83.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||++.+..++.++||||+|++ +++++ |..|+...   ....+.. 
T Consensus       241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~---~~~~~~~-  316 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI---PVEELFK-  316 (370)
T ss_dssp             CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC---CGGGHHH-
T ss_pred             CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHH-
Confidence            589999999986543322222233456788999999998889999999999987 89998 87776432   1111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                         ........         ..+......+.+++.+||+.||.+||++.||+++|+.+.
T Consensus       317 ---~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          317 ---LLKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             ---HHHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HHhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence               11111111         111122346888999999999999999999999998753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.74  E-value=1.2e-18  Score=131.21  Aligned_cols=122  Identities=25%  Similarity=0.347  Sum_probs=81.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............|+..|+|||++.+..+ +.++||||+|++ +++++|..||......   . ...
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~-~~~  218 (323)
T 3tki_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---C-QEY  218 (323)
T ss_dssp             CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---S-HHH
T ss_pred             CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---H-HHH
Confidence            579999999986532222222334678999999999987765 678999999987 8999999997432211   1 111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .  .......  ...+      .......+.+|+.+||+.||++|||+.||++|.+-.
T Consensus       219 ~--~~~~~~~--~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~  266 (323)
T 3tki_A          219 S--DWKEKKT--YLNP------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN  266 (323)
T ss_dssp             H--HHHTTCT--TSTT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             H--HHhcccc--cCCc------cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhc
Confidence            1  1111110  0111      011123578899999999999999999999987654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.74  E-value=4.1e-18  Score=126.26  Aligned_cols=130  Identities=14%  Similarity=0.082  Sum_probs=88.8

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........     .......|+..|+|||.+.+..++.++||||+|++ +++++|..||..........
T Consensus       146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 4hgt_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence            5899999999875433221     11234578999999999998889999999999987 89999999986543333333


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ..............     +.....+    ...+.+++.+||+.||++||++.+|++.|+++...
T Consensus       226 ~~~~~~~~~~~~~~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          226 KYERISEKKMSTPI-----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHHHHHHHHHSCH-----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhcccccchh-----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence            22222111111110     0000111    23688999999999999999999999999876543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.74  E-value=1.1e-19  Score=136.83  Aligned_cols=123  Identities=20%  Similarity=0.267  Sum_probs=82.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............|+..|+|||.+.+..++.++||||+|++ +++++ |..|+....   .......
T Consensus       153 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---~~~~~~~  229 (325)
T 3kex_A          153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR---LAEVPDL  229 (325)
T ss_dssp             CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC---TTHHHHH
T ss_pred             eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC---HHHHHHH
Confidence            589999999986543333323334567789999999988889999999999987 89999 888874321   1111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                          .........  +       ......+.+++.+||+.||.+||++.+|+++|+.+...
T Consensus       230 ----~~~~~~~~~--~-------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          230 ----LEKGERLAQ--P-------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             ----HHTTCBCCC--C-------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             ----HHcCCCCCC--C-------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                111111111  1       01112477899999999999999999999999987654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.74  E-value=7.3e-19  Score=131.70  Aligned_cols=126  Identities=25%  Similarity=0.320  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  ........|+..|+|||.+.+..++.++||||+|++ +++++|..||....      .....
T Consensus       177 ~~kL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~------~~~~~  248 (309)
T 3p86_A          177 TVKVCDFGLSRLKAST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN------PAQVV  248 (309)
T ss_dssp             CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC------HHHHH
T ss_pred             cEEECCCCCCcccccc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            5899999999754321  111234578999999999998889999999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPP  144 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~~~  144 (181)
                      ...........         .+.....++.+|+.+||+.||++|||+.+|++.|+.+.....++
T Consensus       249 ~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          249 AAVGFKCKRLE---------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             HHHHHSCCCCC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             HHHHhcCCCCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence            11111111111         11122246889999999999999999999999999876654433

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.73  E-value=5.3e-18  Score=126.49  Aligned_cols=133  Identities=30%  Similarity=0.415  Sum_probs=90.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++...............|+..|+|||.+.+ .++.++|||++|++ +++++|..|+......  .......
T Consensus       171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~  247 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIK  247 (307)
T ss_dssp             CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS--SBTTHHH
T ss_pred             cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch--HHHHHHH
Confidence            589999999986543322222334578999999998765 47889999999987 8999999887543222  1122221


Q ss_pred             HHHHh-cCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           81 WKLWC-EGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        81 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ..... ...+...+++.+ ...+......+.+++.+||+.||.+||++.+|+++|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            11111 111222222222 2345566778999999999999999999999999998764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.73  E-value=2.3e-19  Score=135.36  Aligned_cols=122  Identities=22%  Similarity=0.361  Sum_probs=82.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+....   ...+...
T Consensus       155 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---~~~~~~~  231 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP---ASEISSI  231 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC---GGGHHHH
T ss_pred             CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC---HHHHHHH
Confidence            579999999986643333222333456778999999998889999999999987 89999 888874321   1111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                          .......         ..+......+..++.+||+.||++||++.+|+++|+.+..
T Consensus       232 ----~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          232 ----LEKGERL---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             ----HHTTCCC---------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             ----HHcCCCC---------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                1111100         1111223468889999999999999999999999987644

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.72  E-value=3.1e-18  Score=127.25  Aligned_cols=130  Identities=23%  Similarity=0.293  Sum_probs=84.4

Q ss_pred             CceeeceecceeecCCCCcc--cccccccCCCccCccccccC------ccCcccceeehhHH-HHHHhc----------C
Q 041917            2 NPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEG------VFSIKSDVFSFGVL-LEIVSG----------K   62 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~------~~~~~~diws~gv~-~~~~~g----------~   62 (181)
                      ++||+|||+++.........  ......|+..|+|||.+.+.      .++.++||||+|++ +++++|          .
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~  230 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK  230 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence            58999999998654332221  12234789999999998765      45578999999987 899999          5


Q ss_pred             CCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccc-cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           63 RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLK-QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .|+....... ... ............    .+.+. ..........+.+|+.+||+.||++|||+.+|++.|+++
T Consensus       231 ~pf~~~~~~~-~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          231 PPFYDVVPND-PSF-EDMRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CTTTTTSCSS-CCH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccccCCCC-cch-hhhhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            5543221111 111 111121111111    11111 112334566799999999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.72  E-value=2.2e-18  Score=131.12  Aligned_cols=121  Identities=29%  Similarity=0.354  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............|+..|+|||++.+..++.++||||+|++ +++++ |..|+....   ...   .
T Consensus       231 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---~~~---~  304 (359)
T 3vhe_A          231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK---IDE---E  304 (359)
T ss_dssp             CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC---CSH---H
T ss_pred             cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc---hhH---H
Confidence            589999999986543333333344567888999999988889999999999987 89998 888864321   111   1


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .............         +.....++.+++.+||+.||.+|||+.||+++|+.+
T Consensus       305 ~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          305 FCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             HHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            1111111111111         111223688999999999999999999999999865

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.71  E-value=7e-18  Score=133.48  Aligned_cols=127  Identities=13%  Similarity=0.117  Sum_probs=85.7

Q ss_pred             CceeeceecceeecCCCCcc-----cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEA-----NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-----~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++.........     ......|+..|++||.+.+..++.++|||++|++ +++++|..||..........
T Consensus       144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~  223 (483)
T 3sv0_A          144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ  223 (483)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH
T ss_pred             eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH
Confidence            58999999998764332211     1224678999999999999889999999999987 89999999985432221111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ............    .+.. +...    ...++.+|+..||+.||++||++.+|++.|+++
T Consensus       224 ~~~~i~~~~~~~----~~~~-l~~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          224 KYEKISEKKVAT----SIEA-LCRG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHHHHHHHS----CHHH-HHTT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhhccccc----cHHH-HhcC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            111111111111    1110 0011    123688999999999999999999999988754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.71  E-value=3.6e-18  Score=130.52  Aligned_cols=135  Identities=12%  Similarity=0.057  Sum_probs=88.1

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||+++........     .......|+..|+|||.+.+..++.++||||+|++ +++++|..||....  ....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~--~~~~  269 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL--KDPK  269 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT--TCHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc--cCHH
Confidence            5899999999865322111     11123469999999999998889999999999987 89999999975321  1111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      ......... ...+..++++.+..   .....++.+++..||+.||++||++.+|++.|+++.....
T Consensus       270 ~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          270 YVRDSKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             HHHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            111111111 11122222221111   1112468889999999999999999999999987655443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.71  E-value=7.5e-19  Score=135.64  Aligned_cols=121  Identities=21%  Similarity=0.289  Sum_probs=77.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----------CccCcccceeehhHH-HHHHhcCCCCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYL   69 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----------~~~~~~~diws~gv~-~~~~~g~~~~~~~~   69 (181)
                      .+||+|||+++..............+|++.|+|||++.+           ..++.++||||+||+ +++++|..||....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            589999999986543222222334579999999999865           357889999999987 89999999874221


Q ss_pred             CCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           70 SKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                           ................         ..+......+.+|+.+||+.||++||++.||++|..-
T Consensus       272 -----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  324 (390)
T 2zmd_A          272 -----NQISKLHAIIDPNHEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  324 (390)
T ss_dssp             -----CHHHHHHHHHCTTSCC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             -----HHHHHHHHHhCccccC---------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence                 1111111111111100         1111112367889999999999999999999988653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.71  E-value=1.6e-17  Score=124.61  Aligned_cols=134  Identities=14%  Similarity=0.135  Sum_probs=87.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc--------cCccCcccceeehhHH-HHHHhcCCCCCCCcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM--------EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~--------~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~   72 (181)
                      .+||+|||+++.......   .....|+..|+|||++.        +..++.++||||+|++ +++++|..||.......
T Consensus       154 ~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  230 (319)
T 4euu_A          154 VYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (319)
T ss_dssp             EEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred             eEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence            379999999987543222   22357899999999886        4668899999999987 89999999874322211


Q ss_pred             CcchHHHHHHHHhcCC--cccccC-----------c-ccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           73 GHSLLTYTWKLWCEGE--ALELMD-----------P-VLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~--~~~~~~-----------~-~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                        ..............  ....+.           . .............+.+++.+||+.||++|||+.|+++|..+..
T Consensus       231 --~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          231 --RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             --GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             --hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence              11111111111110  000000           0 0111234556667889999999999999999999999998765


Q ss_pred             CC
Q 041917          139 IT  140 (181)
Q Consensus       139 ~~  140 (181)
                      ..
T Consensus       309 ~~  310 (319)
T 4euu_A          309 HR  310 (319)
T ss_dssp             C-
T ss_pred             hc
Confidence            44

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.71  E-value=4.9e-18  Score=137.82  Aligned_cols=117  Identities=24%  Similarity=0.231  Sum_probs=82.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+|+.....    ...+.+||+.|+|||++.. ..|+.++|+||+||+ ++|++|..||......   .....
T Consensus       330 ~vKL~DFGlA~~~~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~---~~~~i  402 (689)
T 3v5w_A          330 HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEI  402 (689)
T ss_dssp             CEEECCCTTCEECSSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC---CHHHH
T ss_pred             CEEecccceeeecCCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHH
Confidence            6899999999875332    2345689999999999964 579999999999987 8999999998532221   12111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~~  136 (181)
                      ...... ... .+         +.....++.+|+.+||..||.+|++     +.||+.|-.-
T Consensus       403 ~~~i~~-~~~-~~---------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF  453 (689)
T 3v5w_A          403 DRMTLT-MAV-EL---------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  453 (689)
T ss_dssp             HHHHHH-CCC-CC---------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred             HHhhcC-CCC-CC---------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence            111111 111 11         1112346889999999999999998     7999998653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.71  E-value=8.3e-19  Score=134.97  Aligned_cols=123  Identities=27%  Similarity=0.304  Sum_probs=84.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~------~~~~~  302 (382)
T 3tt0_A          229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEEL  302 (382)
T ss_dssp             CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHH
T ss_pred             cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            589999999986543222222233456788999999998889999999999987 89998 87776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      . ...........         +.....++.+|+.+||+.||++|||+.||+++|+.+...
T Consensus       303 ~-~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          303 F-KLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             H-HHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H-HHHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            1 11111111111         111224688999999999999999999999999877543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.71  E-value=3.5e-19  Score=136.45  Aligned_cols=122  Identities=29%  Similarity=0.283  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............|+..|+|||.+.+..++.++||||+||+ +++++ |..|+...      .....
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~------~~~~~  295 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK------SNQEV  295 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHH
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            489999999975422222222233467889999999988889999999999987 89997 87776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ... .........         +......+.+|+.+||+.||++||++.+|+++|+....
T Consensus       296 ~~~-i~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          296 LEF-VTSGGRMDP---------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HHH-HHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHH-HHcCCCCCC---------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            111 111111111         11122358899999999999999999999999987654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.71  E-value=7.5e-18  Score=127.80  Aligned_cols=121  Identities=21%  Similarity=0.278  Sum_probs=75.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----------CccCcccceeehhHH-HHHHhcCCCCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYL   69 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----------~~~~~~~diws~gv~-~~~~~g~~~~~~~~   69 (181)
                      .+||+|||+++...............|+..|+|||++.+           ..++.++||||+|++ +++++|..||....
T Consensus       145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  224 (343)
T 3dbq_A          145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  224 (343)
T ss_dssp             EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence            479999999986543322222334579999999999864           567889999999987 89999999874211


Q ss_pred             CCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           70 SKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                           .............         .....+......+.+|+.+||+.||++|||+.||++|..-
T Consensus       225 -----~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~  277 (343)
T 3dbq_A          225 -----NQISKLHAIIDPN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  277 (343)
T ss_dssp             -----SHHHHHHHHHCTT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             -----hHHHHHHHHhcCC---------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence                 1111111111111         1111111112357889999999999999999999998653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.70  E-value=1.4e-17  Score=126.37  Aligned_cols=132  Identities=16%  Similarity=0.129  Sum_probs=85.7

Q ss_pred             CceeeceecceeecCCCC-----cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQN-----EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-----~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++.......     ........|+..|+|||++.+..++.++||||+|++ +++++|..||....  ....
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~  268 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL--KDPV  268 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT--TCHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc--cccH
Confidence            689999999986532111     111134578999999999998889999999999987 89999999974211  1111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ........... .....+......   .....++.+++.+||+.||++||++.+|++.|++...
T Consensus       269 ~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          269 AVQTAKTNLLD-ELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHHHHHH-TTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHHHHHhhcc-cccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            11111111111 111111000000   0122368899999999999999999999999998754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.70  E-value=1.6e-17  Score=128.67  Aligned_cols=123  Identities=17%  Similarity=0.129  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc-chHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH-SLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~-~~~~~   79 (181)
                      .+||+|||+++.....   ......+|+..|+|||++.+..++.++||||+||+ +++++|..||......... .....
T Consensus       202 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  278 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR  278 (400)
T ss_dssp             CEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH
T ss_pred             cEEEEecccccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH
Confidence            5899999999864321   12234578999999999988889999999999987 8999999998543222111 11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .    ..... ....+.     ......++.+|+.+||+.||++|||+.||+.|..-.
T Consensus       279 i----~~~~~-~~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          279 I----RMGQY-EFPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             H----HHTCC-CCCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             H----HcCcc-cCCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            1    11111 111110     011224688999999999999999999999996543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.70  E-value=4.6e-19  Score=136.18  Aligned_cols=121  Identities=29%  Similarity=0.295  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+....++.++||||+|++ +++++ |..|+....      ....
T Consensus       251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~------~~~~  324 (377)
T 3cbl_A          251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS------NQQT  324 (377)
T ss_dssp             CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC------HHHH
T ss_pred             cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHH
Confidence            589999999986432111111111234667999999988889999999999987 89998 777764321      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                       ..........         ..+.....++.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       325 -~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          325 -REFVEKGGRL---------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             -HHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -HHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence             1111111111         111122346888999999999999999999999998753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.70  E-value=1.4e-17  Score=123.97  Aligned_cols=119  Identities=22%  Similarity=0.305  Sum_probs=82.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......|+..|+|||.+.+..++.++||||+|++ +++++|..||...      ......
T Consensus       154 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~  225 (297)
T 3fxz_A          154 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRAL  225 (297)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHH
T ss_pred             CEEEeeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            589999999886543222  2334578999999999998889999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......... ...       .+......+.+++.+||+.||++|||+.|+++|..-
T Consensus       226 ~~~~~~~~~-~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~  273 (297)
T 3fxz_A          226 YLIATNGTP-ELQ-------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL  273 (297)
T ss_dssp             HHHHHHCSC-CCS-------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             HHHHhCCCC-CCC-------CccccCHHHHHHHHHHccCChhHCcCHHHHhhChhh
Confidence            111111110 110       111222457889999999999999999999998654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.70  E-value=1.2e-17  Score=123.69  Aligned_cols=127  Identities=19%  Similarity=0.289  Sum_probs=76.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++...............|+..|+|||.+.   ...++.++||||+|++ +++++|..|+.....     . 
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~-  231 (289)
T 3og7_A          158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----R-  231 (289)
T ss_dssp             EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----H-
T ss_pred             CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-----H-
Confidence            47999999987543222222223457899999999986   5567889999999987 899999998743211     1 


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ...............+.. .    .......+.+++.+||+.||.+||++.+|++.|+.+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          232 DQIIEMVGRGSLSPDLSK-V----RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHHTSCCCCTTS-S----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHhcccccCcchhh-c----cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            111111111111111111 1    11223468899999999999999999999999998754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.70  E-value=2e-17  Score=124.72  Aligned_cols=127  Identities=14%  Similarity=0.100  Sum_probs=84.4

Q ss_pred             CceeeceecceeecCCCCcc-----cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEA-----NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-----~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++.........     ......|+..|+|||++.+..++.++||||+|++ +++++|..||.....   ..
T Consensus       148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~---~~  224 (330)
T 2izr_A          148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA---DT  224 (330)
T ss_dssp             SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---SS
T ss_pred             eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc---cc
Confidence            38999999998654322211     1234679999999999999889999999999987 899999999854321   12


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ......... .... ......+....     .++.+++..||+.||.+||++.+|++.|+++.
T Consensus       225 ~~~~~~~i~-~~~~-~~~~~~~~~~~-----p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          225 LKERYQKIG-DTKR-ATPIEVLCENF-----PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HHHHHHHHH-HHHH-HSCHHHHTTTC-----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-hhhc-cCCHHHHhccC-----hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            211111110 0000 00000011111     16889999999999999999999999887543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.70  E-value=8.1e-18  Score=126.95  Aligned_cols=134  Identities=19%  Similarity=0.157  Sum_probs=83.9

Q ss_pred             CceeeceecceeecCCCC------cccccccccCCCccCcccccc-------CccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQN------EANTNRVVGTYGYMAPEYAME-------GVFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~------~~~~~~~~g~~~~~aPe~~~~-------~~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      ++||+|||+++.......      ........|+..|+|||++.+       ..++.++||||+|++ +++++|..|+..
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            589999999986542211      111224578999999999876       456678999999987 899999777533


Q ss_pred             CcCCCCcc-h----------HHHHHHHHhcCCcccccCcccccC--CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           68 YLSKDGHS-L----------LTYTWKLWCEGEALELMDPVLKQS--CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        68 ~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ........ .          .............    .+.+...  ........+.+|+.+||+.||++|||+.||++.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L  313 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM  313 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence            22211110 0          0000111111111    1111111  1223556789999999999999999999999999


Q ss_pred             hcCCC
Q 041917          135 ASDTI  139 (181)
Q Consensus       135 ~~~~~  139 (181)
                      +++..
T Consensus       314 ~~ll~  318 (336)
T 3g2f_A          314 AELMM  318 (336)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=9e-19  Score=132.68  Aligned_cols=125  Identities=29%  Similarity=0.350  Sum_probs=83.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++................|+..|+|||.+.+..++.++||||+|++ +++++ |..|+.....  ....   
T Consensus       210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~---  284 (344)
T 1rjb_A          210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV--DANF---  284 (344)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC--SHHH---
T ss_pred             cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc--HHHH---
Confidence            579999999986543333222334467788999999988889999999999987 89997 8888643211  1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                       ..........         ..+.....++.+|+.+||+.||.+||++.+|+++|+.+....
T Consensus       285 -~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          285 -YKLIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             -HHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             -HHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence             1111111100         111112346888999999999999999999999999876543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.70  E-value=1.8e-18  Score=129.31  Aligned_cols=121  Identities=26%  Similarity=0.353  Sum_probs=83.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+....   ...+.. 
T Consensus       188 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---~~~~~~-  263 (314)
T 2ivs_A          188 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP---PERLFN-  263 (314)
T ss_dssp             EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC---GGGHHH-
T ss_pred             CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHH-
Confidence            579999999986543333222233456778999999988889999999999987 89998 888764321   111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                         .........         .+......+.+++.+||+.||++||++.+|+++|+.+.
T Consensus       264 ---~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          264 ---LLKTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             ---HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HhhcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence               111111111         11122346889999999999999999999999998753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.69  E-value=1.5e-18  Score=130.99  Aligned_cols=123  Identities=22%  Similarity=0.351  Sum_probs=77.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   ....+...
T Consensus       155 ~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~---~~~~~~~~  231 (327)
T 3lzb_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSI  231 (327)
T ss_dssp             EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC---CGGGHHHH
T ss_pred             CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHH
Confidence            579999999986543322222223456778999999998889999999999987 89998 88887432   11111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                          .......         ..+......+.+++.+||+.||.+||++.||++.|+.+...
T Consensus       232 ----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          232 ----LEKGERL---------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             ----HHTTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             ----HHcCCCC---------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence                1111111         11111223688899999999999999999999999987543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=1.8e-17  Score=124.94  Aligned_cols=132  Identities=23%  Similarity=0.283  Sum_probs=82.5

Q ss_pred             CceeeceecceeecCCCCcc--cccccccCCCccCccccccCccCcc------cceeehhHH-HHHHhcCC---------
Q 041917            2 NPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEGVFSIK------SDVFSFGVL-LEIVSGKR---------   63 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~~~~~~------~diws~gv~-~~~~~g~~---------   63 (181)
                      ++||+|||+++.........  ......|+..|+|||.+.+..+...      +||||+|++ +++++|..         
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~  259 (337)
T 3mdy_A          180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ  259 (337)
T ss_dssp             CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence            58999999997653322211  1124578999999999987665554      899999987 89999943         


Q ss_pred             -CCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccC-CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           64 -NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQS-CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        64 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                       |+......  ...............    ..+..... .......++.+|+.+||+.||++|||+.+|+++|+.+..
T Consensus       260 ~p~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          260 LPYHDLVPS--DPSYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             CTTTTTSCS--SCCHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccHhhhcCC--CCchhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence             33221111  111111111111111    11111111 123556678999999999999999999999999987654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.69  E-value=4.1e-17  Score=120.54  Aligned_cols=118  Identities=23%  Similarity=0.382  Sum_probs=80.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc--cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM--EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~--~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++....     ......|+..|+|||.+.  ...++.++||||+|++ +++++|..|+....    .....
T Consensus       167 ~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~  237 (287)
T 4f0f_A          167 CAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS----YGKIK  237 (287)
T ss_dssp             CEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC----CCHHH
T ss_pred             eEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc----ccHHH
Confidence            389999999874321     123457899999999984  4557889999999987 89999999874321    11111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ....... ...    .+...    ......+.+++.+||+.||++|||+.+|++.|+++
T Consensus       238 ~~~~~~~-~~~----~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          238 FINMIRE-EGL----RPTIP----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHH-SCC----CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHhc-cCC----CCCCC----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            1111111 111    11111    12234688999999999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.69  E-value=9.7e-18  Score=125.39  Aligned_cols=122  Identities=29%  Similarity=0.362  Sum_probs=83.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............|+..|+|||.+.+..++.++||||+|++ +++++ |..|+.....  ...    
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~----  259 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEE----  259 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC--SHH----
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch--hHH----
Confidence            579999999986543333333334567888999999988889999999999987 89998 8877642211  111    


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .............         +......+.+++.+||+.||.+|||+.+|+++|+++.
T Consensus       260 ~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          260 FCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             HHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhccCccCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1111111111111         1112236888999999999999999999999998753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.69  E-value=1.8e-17  Score=121.40  Aligned_cols=117  Identities=27%  Similarity=0.380  Sum_probs=75.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......    .....|+..|+|||.+.+..++.++||||+|++ +++++|..|+....      .....
T Consensus       154 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~  223 (271)
T 3dtc_A          154 ILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID------GLAVA  223 (271)
T ss_dssp             CEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC------HHHHH
T ss_pred             ceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            47999999997543221    123468889999999988889999999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...... ...    .    ..+......+.+++.+||+.||++|||+.||+++|+.+
T Consensus       224 ~~~~~~-~~~----~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          224 YGVAMN-KLA----L----PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHTS-CCC----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HhhhcC-CCC----C----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            111111 111    0    11112234688999999999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.69  E-value=6.6e-17  Score=123.53  Aligned_cols=132  Identities=19%  Similarity=0.143  Sum_probs=83.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+..++.++||||+|++ +++++|..||...............
T Consensus       176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  250 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  250 (373)
T ss_dssp             EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence            5799999999864321     223478899999999998889999999999987 8999999987533221111111110


Q ss_pred             HHHHh-cCCc--------------------ccccCc--------c--cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           81 WKLWC-EGEA--------------------LELMDP--------V--LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        81 ~~~~~-~~~~--------------------~~~~~~--------~--~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                      ..... -+..                    ...+..        .  .....+.....++.+|+.+||+.||++|||+.|
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence            00000 0000                    000000        0  001234556678899999999999999999999


Q ss_pred             HHHHhhcCC
Q 041917          130 VVVMLASDT  138 (181)
Q Consensus       130 vl~~L~~~~  138 (181)
                      |++|..-..
T Consensus       331 ll~hp~f~~  339 (373)
T 1q8y_A          331 LVNHPWLKD  339 (373)
T ss_dssp             HHTCGGGTT
T ss_pred             HhhChhhhc
Confidence            999876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.69  E-value=3.7e-18  Score=134.09  Aligned_cols=127  Identities=25%  Similarity=0.337  Sum_probs=81.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...... ........++..|+|||.+....++.++||||+|++ +++++ |..|+...      .....
T Consensus       318 ~~kl~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~------~~~~~  390 (452)
T 1fmk_A          318 VCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------VNREV  390 (452)
T ss_dssp             CEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHH
T ss_pred             CEEECCCccceecCCCc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            58999999998653221 111122346778999999988889999999999987 89998 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPT  145 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~~~~  145 (181)
                      ... ......         ...+......+.+|+.+||+.||++|||+.+|++.|+.+.....+..
T Consensus       391 ~~~-i~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~  446 (452)
T 1fmk_A          391 LDQ-VERGYR---------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY  446 (452)
T ss_dssp             HHH-HHTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCC
T ss_pred             HHH-HHcCCC---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCccc
Confidence            111 111110         11112223468899999999999999999999999999876554443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.68  E-value=3e-17  Score=126.25  Aligned_cols=129  Identities=15%  Similarity=0.092  Sum_probs=85.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+..++.++||||+||+ +++++|..||...............
T Consensus       234 ~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~  308 (397)
T 1wak_A          234 KVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI  308 (397)
T ss_dssp             CEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHH
T ss_pred             ceEecccccccccccc-----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHH
Confidence            6899999999864321     223478999999999998889999999999987 8999999998543322211111111


Q ss_pred             ---HHHHhcC---------CcccccCcc-------------------cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           81 ---WKLWCEG---------EALELMDPV-------------------LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        81 ---~~~~~~~---------~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                         .......         .....+...                   -....+......+.+|+.+||+.||++|||+.|
T Consensus       309 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  388 (397)
T 1wak_A          309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE  388 (397)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred             HHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence               1100000         000000000                   001234556678899999999999999999999


Q ss_pred             HHHHhh
Q 041917          130 VVVMLA  135 (181)
Q Consensus       130 vl~~L~  135 (181)
                      |++|-.
T Consensus       389 ~l~hp~  394 (397)
T 1wak_A          389 CLRHPW  394 (397)
T ss_dssp             HHTSGG
T ss_pred             HhhCcc
Confidence            998854

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.68  E-value=2.1e-18  Score=130.42  Aligned_cols=124  Identities=24%  Similarity=0.268  Sum_probs=83.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~------~~~~~  285 (343)
T 1luf_A          212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM------AHEEV  285 (343)
T ss_dssp             CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS------CHHHH
T ss_pred             eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC------ChHHH
Confidence            589999999875432221122233467888999999988889999999999987 89998 88776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                       ............         +......+.+++.+||+.||++||++.+|+++|+++....
T Consensus       286 -~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          286 -IYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             -HHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             -HHHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence             111122211111         1112246888999999999999999999999999986543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.68  E-value=7.3e-18  Score=131.63  Aligned_cols=59  Identities=22%  Similarity=0.327  Sum_probs=49.2

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCC
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSG   66 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~   66 (181)
                      +||+|||+++....     ......|+..|+|||++.+..++.++||||+||+ +++++|..||.
T Consensus       241 vkL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~  300 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP  300 (429)
T ss_dssp             EEECCCTTCEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eEEeecccceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence            89999999975321     1223578999999999999889999999999987 89999988874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.68  E-value=5.5e-18  Score=133.08  Aligned_cols=116  Identities=26%  Similarity=0.265  Sum_probs=80.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....     .....++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   ....+...
T Consensus       327 ~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~---~~~~~~~~  398 (450)
T 1k9a_A          327 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI---PLKDVVPR  398 (450)
T ss_dssp             CEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS---CTTTHHHH
T ss_pred             CEEEeeCCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---CHHHHHHH
Confidence            5899999999854221     112356788999999998889999999999987 89998 88887432   11222211


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                          ...+..         ...+......+.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus       399 ----i~~~~~---------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          399 ----VEKGYK---------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             ----HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----HHcCCC---------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                111111         1111222346889999999999999999999999998753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.68  E-value=3.2e-18  Score=127.85  Aligned_cols=122  Identities=26%  Similarity=0.396  Sum_probs=82.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+.....  ....   
T Consensus       183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~---  257 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--DSKF---  257 (313)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS--SHHH---
T ss_pred             CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc--hhHH---
Confidence            479999999986543333222333456778999999988889999999999987 89998 8777642211  1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                       ....... .....        +......+.+++.+||+.||.+|||+.+|+++|++..
T Consensus       258 -~~~~~~~-~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          258 -YKMIKEG-FRMLS--------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             -HHHHHHT-CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -HHHhccC-CCCCC--------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence             1111111 00000        1112246888999999999999999999999998754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.68  E-value=2.6e-18  Score=129.39  Aligned_cols=121  Identities=17%  Similarity=0.155  Sum_probs=66.8

Q ss_pred             CceeeceecceeecCCCCcc----------cccccccCCCccCcccc---ccCccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEA----------NTNRVVGTYGYMAPEYA---MEGVFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~----------~~~~~~g~~~~~aPe~~---~~~~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      ++||+|||+++.........          ......|+..|+|||++   .+..++.++||||+|++ +++++|..|+..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            58999999998653321111          11134688999999998   45667889999999987 899999998742


Q ss_pred             CcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           68 YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      ....   ..        ...... ...   ...    ....+.+|+.+||+.||.+||++.||+++|+.+....
T Consensus       256 ~~~~---~~--------~~~~~~-~~~---~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          256 GAKL---RI--------VNGKYS-IPP---HDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             ---------------------CC-CCT---TCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hhHH---Hh--------hcCccc-CCc---ccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            1110   00        000000 000   001    1124778999999999999999999999998876543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.68  E-value=4.7e-18  Score=127.03  Aligned_cols=124  Identities=27%  Similarity=0.412  Sum_probs=82.1

Q ss_pred             CceeeceecceeecCCCCcc------------cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEA------------NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFY   68 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~------------~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~   68 (181)
                      ++||+|||+++.........            ......|+..|+|||.+.+..++.++||||+|++ +++++|..++...
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            58999999998653221110            1114578999999999999889999999999987 8999998876543


Q ss_pred             cCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           69 LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ........... ......             ..+......+.+++.+||+.||++|||+.+|++.|+.+..
T Consensus       226 ~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          226 LPRTMDFGLNV-RGFLDR-------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             SCBCTTSSBCH-HHHHHH-------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHhhhh-hccccc-------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            22211110000 000000             0011111257889999999999999999999999987654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.68  E-value=2.3e-18  Score=129.33  Aligned_cols=123  Identities=20%  Similarity=0.301  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   ....... 
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~---~~~~~~~-  250 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI---ENAEIYN-  250 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC---CGGGHHH-
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc---ChHHHHH-
Confidence            589999999986533222222223356778999999988889999999999987 89999 77776422   1111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                        ... .......         +......+.+++.+||+.||++|||+.+|++.|+++...
T Consensus       251 --~~~-~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          251 --YLI-GGNRLKQ---------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             --HHH-TTCCCCC---------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --HHh-cCCCCCC---------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence              111 1111111         111224688999999999999999999999999877554

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.68  E-value=4e-17  Score=123.06  Aligned_cols=120  Identities=16%  Similarity=0.188  Sum_probs=79.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......   .....|+..|+|||.+.+..++.++|||++|++ +++++|..|+....      .....
T Consensus       172 ~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~  242 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED------NQETY  242 (327)
T ss_dssp             CEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHH
T ss_pred             cEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHH
Confidence            579999999986532211   233578999999999998889999999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .... .... .....     ........+.+++.+||+.||++|||+.++++|..-.
T Consensus       243 ~~i~-~~~~-~~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~  292 (327)
T 3lm5_A          243 LNIS-QVNV-DYSEE-----TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ  292 (327)
T ss_dssp             HHHH-HTCC-CCCTT-----TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGC
T ss_pred             HHHH-hccc-ccCch-----hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhc
Confidence            1111 1100 11111     1111224578899999999999999999999996654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.68  E-value=2.4e-17  Score=125.38  Aligned_cols=135  Identities=11%  Similarity=0.066  Sum_probs=87.1

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........     .......|+..|+|||.+.+..++.++||||+|++ +++++|..||...... ...
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~  277 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN-TED  277 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-HHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC-HHH
Confidence            5899999999765321111     11123478999999999998889999999999987 8999999987432211 111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      +... ...... ....+.......   .....++.+|+.+||+.||++||++.+|++.|+++.....
T Consensus       278 ~~~~-~~~~~~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          278 IMKQ-KQKFVD-KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHH-HHHHHH-SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHH-HHhccC-Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            1111 111111 111122111100   0112468889999999999999999999999987755443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.67  E-value=7.9e-17  Score=121.21  Aligned_cols=121  Identities=21%  Similarity=0.249  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......  ......|+..|+|||++.+..++.++||||+|++ +++++|..|+...      ......
T Consensus       179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~------~~~~~~  250 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD------SPVQAM  250 (321)
T ss_dssp             CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHH
T ss_pred             cEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            589999999986543221  2234578999999999988889999999999987 8999999987422      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .. ......     +.+.  ........+.+++.+||+.||++|||+.+|++|..-..
T Consensus       251 ~~-~~~~~~-----~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  300 (321)
T 2c30_A          251 KR-LRDSPP-----PKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ  300 (321)
T ss_dssp             HH-HHHSSC-----CCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred             HH-HhcCCC-----CCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence            11 111111     1000  01112235788999999999999999999999876543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.67  E-value=6.6e-18  Score=134.11  Aligned_cols=121  Identities=26%  Similarity=0.308  Sum_probs=83.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...... ........++..|+|||++....++.++||||+|++ +++++ |..|+...   ....+...
T Consensus       356 ~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~---~~~~~~~~  431 (495)
T 1opk_A          356 LVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYEL  431 (495)
T ss_dssp             CEEECCTTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC---CGGGHHHH
T ss_pred             cEEEeecccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC---CHHHHHHH
Confidence            58999999998653221 111222345678999999988889999999999987 89998 77776432   11122111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                          ....         .+...+......+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus       432 ----~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          432 ----LEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             ----HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             ----HHcC---------CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence                1111         1111122223468899999999999999999999999998754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.67  E-value=3.4e-18  Score=134.40  Aligned_cols=122  Identities=27%  Similarity=0.369  Sum_probs=83.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++..... .........++..|+|||++....++.++||||+|++ +++++ |..|+...   ....+.  
T Consensus       322 ~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~---~~~~~~--  395 (454)
T 1qcf_A          322 VCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM---SNPEVI--  395 (454)
T ss_dssp             CEEECSTTGGGGBCCH-HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC---CHHHHH--
T ss_pred             cEEEeeCCCceEcCCC-ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC---CHHHHH--
Confidence            5899999999864321 1111122345678999999988889999999999987 89998 88886421   111111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                       .. ......  .       ..+.....++.+|+.+||+.||++|||+.+|+..|+.+...
T Consensus       396 -~~-i~~~~~--~-------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          396 -RA-LERGYR--M-------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             -HH-HHHTCC--C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             -HH-HHcCCC--C-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence             11 111110  1       11112234688999999999999999999999999988654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.67  E-value=2.8e-18  Score=129.39  Aligned_cols=121  Identities=28%  Similarity=0.391  Sum_probs=81.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+....   ....   
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---~~~~---  275 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL---VNSK---  275 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC---SSHH---
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc---hhHH---
Confidence            479999999986543322222233456778999999988889999999999987 89998 777763221   1111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ..........  ...       +......+.+++.+||+.||.+|||+.+|+++|++.
T Consensus       276 ~~~~~~~~~~--~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          276 FYKLVKDGYQ--MAQ-------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HHHHHHHTCC--CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCC--CCC-------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            1111111110  000       111124688899999999999999999999999865

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.67  E-value=5.9e-18  Score=126.75  Aligned_cols=113  Identities=21%  Similarity=0.332  Sum_probs=75.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   ......|+..|+|||++.+ .++.++||||+|++ +++++|..++....          .
T Consensus       195 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~  260 (311)
T 3p1a_A          195 RCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------G  260 (311)
T ss_dssp             CEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------H
T ss_pred             CEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------H
Confidence            58999999987653221   1223468999999998875 68899999999987 89999977653210          0


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........    ..+..    ......++.+++.+||+.||++|||+.||++|..-
T Consensus       261 ~~~~~~~~----~~~~~----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~  308 (311)
T 3p1a_A          261 WQQLRQGY----LPPEF----TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL  308 (311)
T ss_dssp             HHHHTTTC----CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHHhccC----CCccc----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccc
Confidence            11111111    11111    11123468899999999999999999999988653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.67  E-value=8.8e-17  Score=120.17  Aligned_cols=121  Identities=26%  Similarity=0.395  Sum_probs=78.5

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTW   81 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~   81 (181)
                      +||+|||++......     .....|+..|+|||.+.+..++.++||||+|++ +++++|+.|+.....    .......
T Consensus       145 ~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~  215 (307)
T 2eva_A          145 LKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG----PAFRIMW  215 (307)
T ss_dssp             EEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS----SHHHHHH
T ss_pred             EEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc----cHHHHHH
Confidence            699999998754221     123468999999999998889999999999987 899999998743211    1111111


Q ss_pred             HHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           82 KLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      ... ......     ....    ....+.+++.+||+.||++|||+.+|+++|+.+.....
T Consensus       216 ~~~-~~~~~~-----~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          216 AVH-NGTRPP-----LIKN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HHH-TTCCCC-----CBTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HHh-cCCCCC-----cccc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            111 111111     1111    12357889999999999999999999999988765443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.67  E-value=5.3e-17  Score=122.67  Aligned_cols=132  Identities=21%  Similarity=0.237  Sum_probs=84.1

Q ss_pred             CceeeceecceeecCCCCcc--cccccccCCCccCccccccC------ccCcccceeehhHH-HHHHhc----------C
Q 041917            2 NPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEG------VFSIKSDVFSFGVL-LEIVSG----------K   62 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~------~~~~~~diws~gv~-~~~~~g----------~   62 (181)
                      ++||+|||+++.........  ......|+..|+|||.+.+.      .++.++||||+|++ +++++|          .
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            58999999998764332211  12345789999999998765      23467999999987 899998          4


Q ss_pred             CCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccC-CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           63 RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQS-CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .|+...... .... ...........    ..+.+... ........+.+|+.+||+.||++|||+.+|+++|+++..
T Consensus       265 ~p~~~~~~~-~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          265 LPYYDLVPS-DPSV-EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CTTTTTSCS-SCCH-HHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccccCcC-cccH-HHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            444221111 1111 11122222111    11212111 123455678899999999999999999999999987643

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.67  E-value=1.2e-17  Score=124.73  Aligned_cols=130  Identities=20%  Similarity=0.160  Sum_probs=82.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   ......|+..|+|||++.+..++.++||||+|++ +++++|..||....   ........
T Consensus       158 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i  231 (308)
T 3g33_A          158 TVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS---EADQLGKI  231 (308)
T ss_dssp             CEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS---HHHHHHHH
T ss_pred             CEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH
Confidence            58999999997543221   2234578999999999988889999999999987 89999998874321   11111111


Q ss_pred             HHHHhcCCcccccC------ccccc--C-----CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMD------PVLKQ--S-----CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~------~~~~~--~-----~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...........+..      .....  .     ........+.+|+.+||+.||++|||+.|+++|-.-.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~  301 (308)
T 3g33_A          232 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH  301 (308)
T ss_dssp             HHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC-
T ss_pred             HHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcccc
Confidence            11111110000000      00000  0     0011234678899999999999999999999986543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.67  E-value=4e-18  Score=128.49  Aligned_cols=123  Identities=28%  Similarity=0.324  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      ....
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~------~~~~  262 (325)
T 3kul_A          189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM------TNRD  262 (325)
T ss_dssp             CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS------CHHH
T ss_pred             CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC------CHHH
Confidence            58999999998754322211 1222345678999999988889999999999987 88998 88886322      1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      .... .......         ..+......+.+|+.+||+.||++||++.+|++.|+.+...
T Consensus       263 ~~~~-~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          263 VISS-VEEGYRL---------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHH-HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHH-HHcCCCC---------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            1111 1111100         11112234688999999999999999999999999987543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.67  E-value=4e-18  Score=128.76  Aligned_cols=122  Identities=27%  Similarity=0.299  Sum_probs=83.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~  268 (334)
T 2pvf_A          195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------PVEEL  268 (334)
T ss_dssp             CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHH
T ss_pred             CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC------CHHHH
Confidence            589999999986543322222233456778999999988889999999999987 89998 87776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .. .........         .+......+.+++.+||+.||.+||++.+|+++|+.+..
T Consensus       269 ~~-~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          269 FK-LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HH-HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-HHhcCCCCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            11 111111111         111122468889999999999999999999999987644

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.67  E-value=2.7e-17  Score=126.71  Aligned_cols=131  Identities=18%  Similarity=0.154  Sum_probs=78.7

Q ss_pred             CceeeceecceeecCCC-------------------CcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHh
Q 041917            2 NPKISDFGMARIFGGNQ-------------------NEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVS   60 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-------------------~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~   60 (181)
                      ++||+|||+++......                   ........+||..|+|||++.+ ..++.++||||+||+ +++++
T Consensus       147 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  226 (388)
T 3oz6_A          147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC  226 (388)
T ss_dssp             CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh
Confidence            58999999998653210                   0111234579999999999876 568899999999987 89999


Q ss_pred             cCCCCCCCcCCCCcchHHHHHHHHhcCCcccc-----------c----------CcccccCCc------------HHHHH
Q 041917           61 GKRNSGFYLSKDGHSLLTYTWKLWCEGEALEL-----------M----------DPVLKQSCV------------GAELL  107 (181)
Q Consensus        61 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----------~~~~~~~~~------------~~~~~  107 (181)
                      |..||....   ...................+           +          .......++            .....
T Consensus       227 g~~pf~~~~---~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (388)
T 3oz6_A          227 GKPIFPGSS---TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE  303 (388)
T ss_dssp             SSCSCCCSS---HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCH
T ss_pred             CCCCCCCCC---HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCH
Confidence            998874321   11111111111100000000           0          000000000            01134


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917          108 KYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus       108 ~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ++.+|+.+||..||++|||+.|+++|..
T Consensus       304 ~~~dll~~~L~~dP~~R~t~~e~l~Hp~  331 (388)
T 3oz6_A          304 EALDLLDKLLQFNPNKRISANDALKHPF  331 (388)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSTT
T ss_pred             HHHHHHHHhhccCcccCCCHHHHhCCHH
Confidence            6889999999999999999999999954

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.67  E-value=2.1e-17  Score=124.43  Aligned_cols=131  Identities=25%  Similarity=0.264  Sum_probs=84.0

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCC--------
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK--------   71 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~--------   71 (181)
                      ++||+|||+++......... ......|+..|+|||.+.+..++.++|||++|++ +++++|..|+......        
T Consensus       165 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  244 (327)
T 3lxl_A          165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE  244 (327)
T ss_dssp             EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC--
T ss_pred             CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc
Confidence            57999999998764332221 1223457778999999988888999999999987 8999998886421110        


Q ss_pred             CCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           72 DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      ................         .....+......+.+|+.+||+.||++|||+.+|+++|+.+....
T Consensus       245 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          245 RDVPALSRLLELLEEG---------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             --CCHHHHHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             cccccHHHHHHHhhcc---------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            0000001111111111         111112223346889999999999999999999999999886654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.67  E-value=2.7e-19  Score=132.85  Aligned_cols=129  Identities=22%  Similarity=0.256  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCc-ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcC---------
Q 041917            2 NPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS---------   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~---------   70 (181)
                      ++||+|||+++........ .......++..|+|||.+.+..++.++||||+|++ +++++|..|+.....         
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~  231 (295)
T 3ugc_A          152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND  231 (295)
T ss_dssp             EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTT
T ss_pred             eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCc
Confidence            5799999999865432221 11222346677999999988889999999999987 899999887642110         


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ..................         ....+.....++.+++.+||+.||++|||+.||++.|+.+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          232 KQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             CCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHhccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            000000001111111111         111122233468899999999999999999999999987644

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.67  E-value=1.7e-17  Score=127.07  Aligned_cols=121  Identities=10%  Similarity=-0.073  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++....     ......++..|+|||++.+  ..++.++||||+||+ +++++|+.||...........  
T Consensus       232 ~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~--  304 (371)
T 3q60_A          232 RLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW--  304 (371)
T ss_dssp             CEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCC--
T ss_pred             CEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccch--
Confidence            589999999986421     1112355689999999987  678999999999987 899999999854322111000  


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                            ........................+.+|+.+||+.||++|||+.++++|..
T Consensus       305 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  355 (371)
T 3q60_A          305 ------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE  355 (371)
T ss_dssp             ------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred             ------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHH
Confidence                  000000000000111111122346888999999999999999999997743

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.67  E-value=1e-16  Score=121.08  Aligned_cols=116  Identities=21%  Similarity=0.234  Sum_probs=81.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....   ......+|++.|+|||.+.+..+. .++||||+||+ +++++|..||...      .....
T Consensus       152 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~  222 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ------NLKEL  222 (328)
T ss_dssp             CEEECSTTCCGGGSSS---CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHH
T ss_pred             CEEEeeccCceecCCC---CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC------CHHHH
Confidence            5899999998754322   223446899999999999887765 78999999987 8999999997421      12222


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...... ... ..         +.....++.+++.+||..||.+|||+.|+++|..-.
T Consensus       223 ~~~i~~-~~~-~~---------p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~  269 (328)
T 3fe3_A          223 RERVLR-GKY-RI---------PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWIN  269 (328)
T ss_dssp             HHHHHH-CCC-CC---------CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTT
T ss_pred             HHHHHh-CCC-CC---------CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhc
Confidence            222111 111 11         111223678899999999999999999999986543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.67  E-value=2e-17  Score=125.36  Aligned_cols=115  Identities=17%  Similarity=0.192  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++......   ......+|++.|+|||.+.+..+ +.++||||+|++ +++++|..||.......       
T Consensus       146 ~~kl~DFG~s~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-------  215 (336)
T 3h4j_B          146 NVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-------  215 (336)
T ss_dssp             CEEECCSSCTBTTTTS---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-------
T ss_pred             CEEEEEeccceeccCC---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-------
Confidence            5899999999754322   22234579999999999988776 578999999987 89999999974321110       


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                               ....+... ....+......+.+++.+||..||.+|||+.||++|.+-
T Consensus       216 ---------~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~  262 (336)
T 3h4j_B          216 ---------LFKKVNSC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF  262 (336)
T ss_dssp             ---------CBCCCCSS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred             ---------HHHHHHcC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence                     00001000 001111223467889999999999999999999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.66  E-value=1.6e-17  Score=126.10  Aligned_cols=123  Identities=17%  Similarity=0.147  Sum_probs=83.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......  .....+|+..|+|||++.+..++.++||||+|++ +++++|..||.....   ...... 
T Consensus       158 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~-  231 (342)
T 2qr7_A          158 SIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD---DTPEEI-  231 (342)
T ss_dssp             GEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT---SCHHHH-
T ss_pred             eEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc---CCHHHH-
Confidence            389999999986543221  2234578999999999988788999999999987 899999999753211   111111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......... ....     ........++.+|+.+||..||++||++.+|++|..-
T Consensus       232 ~~~i~~~~~-~~~~-----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~  281 (342)
T 2qr7_A          232 LARIGSGKF-SLSG-----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI  281 (342)
T ss_dssp             HHHHHHCCC-CCCS-----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             HHHHccCCc-ccCc-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence            112222111 1110     1111223468889999999999999999999998653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.66  E-value=4.8e-17  Score=128.18  Aligned_cols=128  Identities=21%  Similarity=0.090  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....   ......+|+..|+|||++.+..|+.++||||+||+ +++++|+.||....   ........
T Consensus       202 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~---~~~~~~~i  275 (464)
T 3ttj_A          202 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD---YIDQWNKV  275 (464)
T ss_dssp             CEEECCCCCC-----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHH
T ss_pred             CEEEEEEEeeeecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH
Confidence            5899999999865321   12234688999999999999899999999999987 89999999874321   11111111


Q ss_pred             HHHHhcCC------c-------------------ccccCccc-cc--CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WKLWCEGE------A-------------------LELMDPVL-KQ--SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~~~~~~~------~-------------------~~~~~~~~-~~--~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      ........      .                   ...+...+ ..  ........++.+|+.+||..||++|||+.|+++
T Consensus       276 ~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11100000      0                   00000000 00  001112456899999999999999999999999


Q ss_pred             Hhh
Q 041917          133 MLA  135 (181)
Q Consensus       133 ~L~  135 (181)
                      |..
T Consensus       356 Hp~  358 (464)
T 3ttj_A          356 HPY  358 (464)
T ss_dssp             STT
T ss_pred             Chh
Confidence            864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.66  E-value=6.7e-17  Score=124.30  Aligned_cols=60  Identities=23%  Similarity=0.398  Sum_probs=50.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSG   66 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~   66 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+..++.++||||+||+ +++++|..||.
T Consensus       199 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  259 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS  259 (382)
T ss_dssp             CEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            5899999999865321     223578899999999998889999999999987 89999998874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.66  E-value=7.3e-18  Score=126.11  Aligned_cols=122  Identities=23%  Similarity=0.286  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   ....... 
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~---~~~~~~~-  260 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV---QNHEMYD-  260 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC---CGGGHHH-
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC---CHHHHHH-
Confidence            589999999976533222122223456778999999988889999999999987 89999 66665322   1111111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                        . .........         +......+.+++.+||+.||.+||++.+|+.+|+.+..
T Consensus       261 --~-~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          261 --Y-LLHGHRLKQ---------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             --H-HHTTCCCCC---------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --H-HHcCCCCCC---------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence              1 111111111         11122468899999999999999999999999987644

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.66  E-value=1.1e-16  Score=125.41  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=81.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++||||+||+ +++++|..||...   .   .....
T Consensus       151 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~---~---~~~~~  222 (444)
T 3soa_A          151 AVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE---D---QHRLY  222 (444)
T ss_dssp             CEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS---S---HHHHH
T ss_pred             cEEEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc---c---HHHHH
Confidence            47999999997653322  12234679999999999998889999999999987 8999999987421   1   11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...... ....+..     .....++.+|+.+||+.||++|||+.|+++|..
T Consensus       223 ~~-i~~~~~-~~~~~~~-----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~  270 (444)
T 3soa_A          223 QQ-IKAGAY-DFPSPEW-----DTVTPEAKDLINKMLTINPSKRITAAEALKHPW  270 (444)
T ss_dssp             HH-HHHTCC-CCCTTTT-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred             HH-HHhCCC-CCCcccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence            11 111111 1111111     111246889999999999999999999999854

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.66  E-value=5.3e-17  Score=121.60  Aligned_cols=130  Identities=22%  Similarity=0.204  Sum_probs=81.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......|+..|+|||++.+ ..++.++||||+|++ +++++|..||.....   ......
T Consensus       157 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~  231 (311)
T 3niz_A          157 ALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD---DDQLPK  231 (311)
T ss_dssp             CEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST---TTHHHH
T ss_pred             CEEEccCcCceecCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh---HHHHHH
Confidence            589999999986532211  1223468999999999876 457899999999987 899999988754322   122222


Q ss_pred             HHHHHhcCCccccc----------------CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELM----------------DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ............+.                ..............++.+|+.+||+.||++|||+.|+++|-.-
T Consensus       232 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  304 (311)
T 3niz_A          232 IFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF  304 (311)
T ss_dssp             HHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             HHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence            22211111110000                0000000011122467899999999999999999999998654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.66  E-value=2e-17  Score=124.71  Aligned_cols=128  Identities=20%  Similarity=0.138  Sum_probs=67.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....  .......+|+..|+|||.+.+..++.++||||+|++ +++++|..||...............
T Consensus       147 ~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~  224 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPD--NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI  224 (325)
T ss_dssp             EEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH
T ss_pred             cEEEeccccceecCCC--CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH
Confidence            5899999999864322  122234578999999999998889999999999987 8999999998543221111111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......... ....     ........++.+|+.+||+.||++|||+.||++|.+-.
T Consensus       225 ~~~i~~~~~-~~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~  275 (325)
T 3kn6_A          225 MKKIKKGDF-SFEG-----EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ  275 (325)
T ss_dssp             HHHHTTTCC-CCCS-----HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred             HHHHHcCCC-CCCc-----ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence            111211111 0100     00011234688999999999999999999999886643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.66  E-value=7.7e-18  Score=126.38  Aligned_cols=122  Identities=26%  Similarity=0.341  Sum_probs=82.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~  249 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL------SNEQV  249 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS------CHHHH
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC------CHHHH
Confidence            589999999875432222222223456788999999988889999999999987 89998 66665321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                       ............         +......+.+++.+||+.||.+|||+.+|+++|++...
T Consensus       250 -~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          250 -LRFVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             -HHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             -HHHHHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence             111111111111         11122358889999999999999999999999998744

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.65  E-value=1.1e-17  Score=135.95  Aligned_cols=122  Identities=23%  Similarity=0.300  Sum_probs=79.6

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......++..|+|||++....++.++||||+|++ +++++ |..|+...   ....+. 
T Consensus       474 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~---~~~~~~-  549 (613)
T 2ozo_A          474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM---KGPEVM-  549 (613)
T ss_dssp             EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC---CSHHHH-
T ss_pred             cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---CHHHHH-
Confidence            58999999998653222111 1112345678999999988889999999999987 89997 88887432   111111 


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                         .........         ..+.....++.+|+.+||+.||++||++.+|++.|+....
T Consensus       550 ---~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          550 ---AFIEQGKRM---------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             ---HHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ---HHHHcCCCC---------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence               111111111         1112233468899999999999999999999999987543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.65  E-value=1.2e-17  Score=122.21  Aligned_cols=121  Identities=28%  Similarity=0.355  Sum_probs=81.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......... ......++..|+|||.+.+..++.++||||+|++ +++++ |..|+....      ....
T Consensus       142 ~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~  214 (268)
T 3sxs_A          142 CVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT------NSEV  214 (268)
T ss_dssp             CEEECCTTCEEECCTTCEE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC------HHHH
T ss_pred             CEEEccCccceecchhhhh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC------hHHH
Confidence            5899999999865332211 1222345667999999988889999999999987 89998 887763211      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .... .....  ...+       ......+.+++.+||+.||++|||+.+|+++|+.+..
T Consensus       215 ~~~~-~~~~~--~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          215 VLKV-SQGHR--LYRP-------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHH-HTTCC--CCCC-------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHH-HcCCC--CCCC-------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            1111 11111  1111       1112368889999999999999999999999998754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.65  E-value=1e-16  Score=118.06  Aligned_cols=117  Identities=19%  Similarity=0.258  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......   .....|+..|+|||.+.+..++.++|||++|++ +++++|..++..        .... 
T Consensus       160 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--------~~~~-  227 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--------TSKF-  227 (284)
T ss_dssp             EEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH--------HHHH-
T ss_pred             CEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh--------HHHH-
Confidence            579999999986543221   223468899999999988888999999999987 899998876421        0000 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLP  142 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~  142 (181)
                      .........        ....    ...+.+++.+||+.||++||++.||+++|+.+.....
T Consensus       228 ~~~~~~~~~--------~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          228 FTDLRDGII--------SDIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             HHHHHTTCC--------CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             HHHhhcccc--------cccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            111111111        1111    2357789999999999999999999999998766533

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.65  E-value=4.1e-17  Score=126.06  Aligned_cols=129  Identities=18%  Similarity=0.177  Sum_probs=80.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......   .....|+..|+|||.+.+. .++.++||||+||+ +++++|..||....   .......
T Consensus       180 ~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~l~~  253 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES---GIDQLVE  253 (394)
T ss_dssp             EEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             cEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            479999999987533222   2345788999999998764 48899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCCc-------ccccC---cccc-----cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEA-------LELMD---PVLK-----QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~-------~~~~~---~~~~-----~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..........       .....   +...     .........++.+|+.+||..||++|||+.|++.|-.-
T Consensus       254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  325 (394)
T 4e7w_A          254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF  325 (394)
T ss_dssp             HHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhh
Confidence            1111000000       00000   0000     00111123468899999999999999999999999543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.65  E-value=1.1e-16  Score=120.76  Aligned_cols=120  Identities=18%  Similarity=0.143  Sum_probs=81.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......   .....|+..|+|||++.+..++.++||||+|++ +++++|..|+...      ......
T Consensus       156 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~  226 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETL  226 (326)
T ss_dssp             CEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHH
T ss_pred             CEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC------CHHHHH
Confidence            589999999986532221   233578999999999988889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ...... ... ...    .......+.+|+.+||..||++|||+.|+++|..-.
T Consensus       227 ~~-~~~~~~-~~~-~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  276 (326)
T 2y0a_A          227 AN-VSAVNY-EFE-DEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  276 (326)
T ss_dssp             HH-HHHTCC-CCC-HHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred             HH-HHhcCC-CcC-ccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence            11 111110 010 000    011123578899999999999999999999986643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.65  E-value=4e-17  Score=124.36  Aligned_cols=126  Identities=21%  Similarity=0.212  Sum_probs=79.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+..++.++||||+||+ +++++|..||.....   .......
T Consensus       200 ~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~~  271 (360)
T 3llt_A          200 GIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH---MEHLAMM  271 (360)
T ss_dssp             CEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHH
T ss_pred             CEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH---HHHHHHH
Confidence            5799999999863221     224578999999999999899999999999987 899999998743211   1111111


Q ss_pred             HHHHhc-----------CCcccccC-cccccCCc--------------------HHHHHHHHHHHHhhccCCCCCCCCHH
Q 041917           81 WKLWCE-----------GEALELMD-PVLKQSCV--------------------GAELLKYIHIGLLCVQEDPARRPSMS  128 (181)
Q Consensus        81 ~~~~~~-----------~~~~~~~~-~~~~~~~~--------------------~~~~~~~~~l~~~cl~~dp~~Rpt~~  128 (181)
                      ......           ......+. ......++                    ......+.+|+.+||+.||++|||+.
T Consensus       272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~  351 (360)
T 3llt_A          272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA  351 (360)
T ss_dssp             HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence            110000           00000000 00000000                    00014577999999999999999999


Q ss_pred             HHHHHhh
Q 041917          129 SVVVMLA  135 (181)
Q Consensus       129 evl~~L~  135 (181)
                      ||++|-.
T Consensus       352 elL~hp~  358 (360)
T 3llt_A          352 ELLKHKF  358 (360)
T ss_dssp             HHTTSGG
T ss_pred             HHhcCcc
Confidence            9998753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.65  E-value=6e-18  Score=127.39  Aligned_cols=122  Identities=29%  Similarity=0.301  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............|+..|+|||.+.+..++.++|||++|++ +++++ |..|+...      .....
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~  254 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK------SNQEV  254 (327)
T ss_dssp             CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHH
T ss_pred             eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc------CHHHH
Confidence            489999999875432222222233467888999999988889999999999987 89998 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .. ..........         +......+.+++.+||+.||.+||++.+|+++|+....
T Consensus       255 ~~-~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          255 LE-FVTSGGRMDP---------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HH-HHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-HHhcCCCCCC---------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            11 1111111111         11122368889999999999999999999999987644

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.65  E-value=9.8e-18  Score=134.26  Aligned_cols=125  Identities=26%  Similarity=0.346  Sum_probs=84.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++..... .........++..|+|||.+....++.++||||+|++ +++++ |..|+...      .....
T Consensus       401 ~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~------~~~~~  473 (535)
T 2h8h_A          401 VCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------VNREV  473 (535)
T ss_dssp             CEEECCTTSTTTCCCH-HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC------CHHHH
T ss_pred             cEEEcccccceecCCC-ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence            5899999999754321 1111122345678999999988889999999999987 89998 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPP  143 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~~  143 (181)
                      ... ......         ...+......+.+|+.+||+.||++|||+.+|++.|+.+.....+
T Consensus       474 ~~~-i~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          474 LDQ-VERGYR---------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             HHH-HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             HHH-HHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence            111 111111         011112234688999999999999999999999999998665443

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.65  E-value=2e-16  Score=119.84  Aligned_cols=116  Identities=19%  Similarity=0.154  Sum_probs=81.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....  ........+|++.|+|||++.+..++.++|+||+|++ +++++|..||...      ......
T Consensus       143 ~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~  214 (337)
T 1o6l_A          143 HIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLF  214 (337)
T ss_dssp             CEEECCCTTCBCSCC--TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEeeccchhhccc--CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC------CHHHHH
Confidence            589999999975322  1122345689999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~  136 (181)
                      .. ...... .+         +.....++.+++.+||+.||++||     ++.||++|..-
T Consensus       215 ~~-i~~~~~-~~---------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f  264 (337)
T 1o6l_A          215 EL-ILMEEI-RF---------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             HH-HHHCCC-CC---------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             HH-HHcCCC-CC---------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence            11 111111 11         111224688899999999999999     99999998653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.65  E-value=1e-16  Score=117.63  Aligned_cols=122  Identities=25%  Similarity=0.342  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++................|+..|+|||.+.+..+ +.++|||++|++ +++++|..|+.....   ... ..
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~-~~  218 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQ-EY  218 (276)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT---TSH-HH
T ss_pred             CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch---HHH-HH
Confidence            579999999876432222222234578899999999987665 678999999987 899999998743211   111 11


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        ........  ...+      .......+.+++.+||+.||++|||+.||++|..-.
T Consensus       219 --~~~~~~~~--~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~  266 (276)
T 2yex_A          219 --SDWKEKKT--YLNP------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN  266 (276)
T ss_dssp             --HHHHTTCT--TSTT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             --HHhhhccc--ccCc------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcccc
Confidence              11111100  0000      011123578899999999999999999999986543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.65  E-value=1e-17  Score=123.59  Aligned_cols=119  Identities=24%  Similarity=0.295  Sum_probs=71.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....... .......++..|+|||.+....++.++||||+|++ +++++ |..|+....   .......
T Consensus       154 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~---~~~~~~~  229 (281)
T 1mp8_A          154 CVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK---NNDVIGR  229 (281)
T ss_dssp             EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC---GGGHHHH
T ss_pred             CEEECccccccccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC---HHHHHHH
Confidence            479999999986532211 11222356678999999988889999999999987 88886 777764321   1111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          ........         .+......+.+++.+||+.||++||++.+|+++|+++
T Consensus       230 ----i~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          230 ----IENGERLP---------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             ----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HHcCCCCC---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                11111111         1112234688899999999999999999999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.65  E-value=1.3e-16  Score=121.93  Aligned_cols=118  Identities=18%  Similarity=0.198  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......|++.|+|||++.+..++.++||||+||+ +++++|..||...   .   .....
T Consensus       169 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~---~---~~~~~  239 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE---D---QHRLY  239 (362)
T ss_dssp             CEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS---S---HHHHH
T ss_pred             CEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC---C---HHHHH
Confidence            48999999997653221   2234579999999999998889999999999987 8999999987421   1   11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...... ....+..     .....++.+|+.+||+.||++||++.|+++|..
T Consensus       240 ~~-i~~~~~-~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  287 (362)
T 2bdw_A          240 AQ-IKAGAY-DYPSPEW-----DTVTPEAKSLIDSMLTVNPKKRITADQALKVPW  287 (362)
T ss_dssp             HH-HHHTCC-CCCTTGG-----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred             HH-HHhCCC-CCCcccc-----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            11 111111 1111110     111246788999999999999999999998854

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=1.4e-17  Score=127.91  Aligned_cols=124  Identities=27%  Similarity=0.338  Sum_probs=74.0

Q ss_pred             CceeeceecceeecCCCCc--ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcC-CCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGK-RNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~-~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++........  .......++..|+|||.+.+..++.++||||+|++ +++++|. .|+...   ......
T Consensus       230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~---~~~~~~  306 (373)
T 3c1x_A          230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV---NTFDIT  306 (373)
T ss_dssp             CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS---CSSCHH
T ss_pred             CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC---CHHHHH
Confidence            5899999999854322111  11123356778999999988889999999999987 8999954 444221   122222


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      ...    .....  ...+       ......+.+++.+||+.||++||++.+|+++|+.+....
T Consensus       307 ~~~----~~~~~--~~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          307 VYL----LQGRR--LLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             HHH----HTTCC--CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHH----HcCCC--CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            111    11111  1111       112236888999999999999999999999999875543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.65  E-value=2.7e-16  Score=119.00  Aligned_cols=121  Identities=17%  Similarity=0.070  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCC--cccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~--~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      .+||+|||+++.......  ........|+..|+|||.+.+  ..++.++||||+|++ +++++|..|+....      .
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~  281 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN------D  281 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------H
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------h
Confidence            689999999986532111  112234578999999999865  568889999999987 89999999874221      1


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .............  ...+..     ......+.+|+.+||+.||++||++.++++|..
T Consensus       282 ~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~  333 (345)
T 3hko_A          282 ADTISQVLNKKLC--FENPNY-----NVLSPLARDLLSNLLNRNVDERFDAMRALQHPW  333 (345)
T ss_dssp             HHHHHHHHHCCCC--TTSGGG-----GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred             HHHHHHHHhcccc--cCCccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence            1111222211111  111110     112246888999999999999999999999854

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.65  E-value=1.1e-16  Score=122.30  Aligned_cols=119  Identities=15%  Similarity=0.116  Sum_probs=81.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   .....+|++.|+|||++.+..++.++|+||+|++ +++++|..||...      ......
T Consensus       157 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~------~~~~~~  227 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETL  227 (361)
T ss_dssp             CEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHH
T ss_pred             CEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            58999999998654321   2234579999999999988889999999999987 8999999987431      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ....... . +.+...    ......+.+|+.+||..||++|||+.|+++|.+-
T Consensus       228 ~-~i~~~~~-~-~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  276 (361)
T 2yab_A          228 A-NITAVSY-D-FDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI  276 (361)
T ss_dssp             H-HHHTTCC-C-CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred             H-HHHhcCC-C-CCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCc
Confidence            1 1111110 0 011000    1112357889999999999999999999988654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.65  E-value=1.2e-16  Score=123.41  Aligned_cols=132  Identities=14%  Similarity=0.125  Sum_probs=86.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc--------CccCcccceeehhHH-HHHHhcCCCCCCCcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--------~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~   72 (181)
                      .+||+|||+++.....   .......|+..|+|||++..        ..++.++||||+|++ +++++|..||.......
T Consensus       154 ~~kL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~  230 (396)
T 4eut_A          154 VYKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (396)
T ss_dssp             EEEECCGGGCEECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT
T ss_pred             eEEEecCCCceEccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc
Confidence            3799999999865322   22234578999999998864        457789999999987 99999999875332211


Q ss_pred             CcchHHHHHHHHhcCCccccc---C-----------c-ccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           73 GHSLLTYTWKLWCEGEALELM---D-----------P-VLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~---~-----------~-~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .  ........... .....+   .           . .............+.+++.+||+.||++||++.|+++.++.+
T Consensus       231 ~--~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          231 R--NKEVMYKIITG-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             T--CHHHHHHHHHS-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             c--hHHHHHHHhcC-CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            1  11111222111 111100   0           0 001123355666788999999999999999999999998765


Q ss_pred             CC
Q 041917          138 TI  139 (181)
Q Consensus       138 ~~  139 (181)
                      ..
T Consensus       308 l~  309 (396)
T 4eut_A          308 LH  309 (396)
T ss_dssp             HT
T ss_pred             hh
Confidence            44

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=8.7e-18  Score=124.67  Aligned_cols=125  Identities=25%  Similarity=0.273  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCC--CcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQ--NEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~--~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++......  .........++..|++||.+.+..++.++||||+|++ +++++|..|+...  ........
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~--~~~~~~~~  239 (298)
T 3pls_A          162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH--IDPFDLTH  239 (298)
T ss_dssp             CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT--SCGGGHHH
T ss_pred             cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc--CCHHHHHH
Confidence            58999999997543211  1111223466788999999998889999999999987 8999977665321  11111111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      .    ........         .+......+.+++.+||+.||.+|||+.+|++.|+++...+
T Consensus       240 ~----~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          240 F----LAQGRRLP---------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             H----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             H----hhcCCCCC---------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            1    11111100         01112236889999999999999999999999998765543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.64  E-value=8.2e-17  Score=124.46  Aligned_cols=123  Identities=20%  Similarity=0.275  Sum_probs=82.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC--cchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG--HSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~--~~~~~   78 (181)
                      ++||+|||+++....  ........+||+.|+|||++.+..++.++|+||+||+ +++++|..||........  .....
T Consensus       191 ~ikL~DFGla~~~~~--~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~  268 (396)
T 4dc2_A          191 HIKLTDYGMCKEGLR--PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  268 (396)
T ss_dssp             CEEECCCTTCBCCCC--TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHH
T ss_pred             CEEEeecceeeeccc--CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHH
Confidence            589999999975322  1222345689999999999999999999999999987 899999999853221111  11111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM------SSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~------~evl~~L~~  136 (181)
                      ........... .+         +.....++.+|+.+||+.||++||++      .||+.|..-
T Consensus       269 ~~~~~i~~~~~-~~---------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff  322 (396)
T 4dc2_A          269 YLFQVILEKQI-RI---------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  322 (396)
T ss_dssp             HHHHHHHHCCC-CC---------CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred             HHHHHHhcccc-CC---------CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence            12222221111 11         11123468899999999999999995      789988653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.64  E-value=1.3e-17  Score=123.01  Aligned_cols=119  Identities=24%  Similarity=0.303  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....... .......++..|+|||.+.+..++.++||||+|++ +++++ |..|+....   .......
T Consensus       151 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~---~~~~~~~  226 (281)
T 3cc6_A          151 CVKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE---NKDVIGV  226 (281)
T ss_dssp             EEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC---GGGHHHH
T ss_pred             cEEeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC---hHHHHHH
Confidence            479999999876432211 11222356778999999988888999999999987 89998 888874221   1112111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .    ........         +......+.+++.+||+.||++||++.+|+++|+++
T Consensus       227 ~----~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          227 L----EKGDRLPK---------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             H----HHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H----hcCCCCCC---------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            1    11111110         111123588899999999999999999999999865

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.64  E-value=1.3e-17  Score=128.10  Aligned_cols=122  Identities=25%  Similarity=0.294  Sum_probs=71.4

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   .   ...
T Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~---~---~~~  258 (373)
T 2qol_A          185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM---S---NQD  258 (373)
T ss_dssp             CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC---C---HHH
T ss_pred             CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC---C---HHH
Confidence            58999999998654322111 1112245678999999988889999999999987 88887 88886322   1   111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .. .......         ....+......+.+++.+||+.||++||++.+|++.|+.+..
T Consensus       259 ~~-~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          259 VI-KAVDEGY---------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             HH-HHHHTTE---------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-HHHHcCC---------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            11 1111110         001111223468899999999999999999999999987643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.64  E-value=1.4e-16  Score=119.25  Aligned_cols=122  Identities=21%  Similarity=0.281  Sum_probs=74.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-----------CccCcccceeehhHH-HHHHhcCCCCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-----------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYL   69 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-----------~~~~~~~diws~gv~-~~~~~g~~~~~~~~   69 (181)
                      .+||+|||+++...............|+..|+|||.+.+           ..++.++||||+|++ +++++|..|+....
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            479999999986543222222234578999999999865           357789999999987 89999999874221


Q ss_pred             CCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           70 SKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                           ............. .        ....+......+.+++.+||+.||++||++.||++|..-.
T Consensus       244 -----~~~~~~~~~~~~~-~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          244 -----NQISKLHAIIDPN-H--------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             -----SHHHHHHHHHCTT-S--------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             -----HHHHHHHHHHhcc-c--------ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence                 1111111111111 1        0011111123678899999999999999999999986543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.64  E-value=2e-16  Score=122.53  Aligned_cols=138  Identities=19%  Similarity=0.204  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCC----C-
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD----G-   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~----~-   73 (181)
                      .+||+|||+++....... .......+|+..|+|||++.+. .++.++||||+||+ +++++|..||.......    . 
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~  249 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY  249 (405)
T ss_dssp             CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred             cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence            589999999986532211 1222346789999999998874 48899999999987 89999999885322110    0 


Q ss_pred             -cchHHHHHHHHhcCCcccc--cC-------------cccccCCcH---------HHHHHHHHHHHhhccCCCCCCCCHH
Q 041917           74 -HSLLTYTWKLWCEGEALEL--MD-------------PVLKQSCVG---------AELLKYIHIGLLCVQEDPARRPSMS  128 (181)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~--~~-------------~~~~~~~~~---------~~~~~~~~l~~~cl~~dp~~Rpt~~  128 (181)
                       ..................+  +.             .........         .....+.+|+.+||..||++|||+.
T Consensus       250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~  329 (405)
T 3rgf_A          250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE  329 (405)
T ss_dssp             CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred             hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence             0111111111110000000  00             000000000         0023578899999999999999999


Q ss_pred             HHHHHhhcCCC
Q 041917          129 SVVVMLASDTI  139 (181)
Q Consensus       129 evl~~L~~~~~  139 (181)
                      |+++|-.-...
T Consensus       330 e~L~hp~f~~~  340 (405)
T 3rgf_A          330 QAMQDPYFLED  340 (405)
T ss_dssp             HHHTSGGGTSS
T ss_pred             HHhcChhhccC
Confidence            99999876543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.64  E-value=1.1e-17  Score=136.28  Aligned_cols=120  Identities=28%  Similarity=0.335  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCc-ccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++........ .......++..|+|||++....++.++||||+|++ +++++ |..|+....      ...
T Consensus       507 ~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~  580 (635)
T 4fl3_A          507 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSE  580 (635)
T ss_dssp             EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHH
T ss_pred             CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHH
Confidence            5799999999865432221 11222356778999999988889999999999987 89998 888874321      111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      . ..........         ..+.....++.+|+..||+.||++||++.+|++.|++.
T Consensus       581 ~-~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          581 V-TAMLEKGERM---------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             H-HHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             H-HHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            1 1111111111         11122334688999999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.64  E-value=1.9e-16  Score=121.56  Aligned_cols=118  Identities=20%  Similarity=0.130  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......   .....|+..|+|||++....++.++||||+||+ +++++|..||....      .....
T Consensus       227 ~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~  297 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN------DAETL  297 (373)
T ss_dssp             EEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHH
T ss_pred             cEEEEeCCCceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            589999999987543221   223468999999999988888999999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ...... .. .......     .....++.+|+.+||+.||++|||+.|+++|..
T Consensus       298 ~~i~~~-~~-~~~~~~~-----~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~  345 (373)
T 2x4f_A          298 NNILAC-RW-DLEDEEF-----QDISEEAKEFISKLLIKEKSWRISASEALKHPW  345 (373)
T ss_dssp             HHHHHT-CC-CSCSGGG-----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             HHHHhc-cC-CCChhhh-----ccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence            111111 10 1111100     112246889999999999999999999999754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=1.8e-17  Score=122.65  Aligned_cols=122  Identities=24%  Similarity=0.304  Sum_probs=83.1

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++.......... .....++..|+|||.+.+..++.++||||+|++ +++++ |..|+....   ..... 
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---~~~~~-  223 (287)
T 1u59_A          148 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK---GPEVM-  223 (287)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC---THHHH-
T ss_pred             CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC---HHHHH-
Confidence            479999999987643222111 122356788999999988888999999999987 89998 888874321   11111 


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                         ..........         .+......+.+++.+||+.||++||++.+|+++|+++..
T Consensus       224 ---~~i~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          224 ---AFIEQGKRME---------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             ---HHHHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HHHhcCCcCC---------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence               1111111111         111223468899999999999999999999999987644

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.64  E-value=1e-16  Score=124.77  Aligned_cols=128  Identities=19%  Similarity=0.136  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......   .....|+..|+|||++.+. .++.++||||+||+ +++++|+.||....   .......
T Consensus       195 ~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~---~~~~l~~  268 (420)
T 1j1b_A          195 VLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS---GVDQLVE  268 (420)
T ss_dssp             EEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             eEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            379999999986532221   2335789999999998764 68899999999987 89999998874321   1111111


Q ss_pred             HHHHHh----------cCCcccccCccccc-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWC----------EGEALELMDPVLKQ-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~----------~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ......          .......--+.+..     ........++.+|+.+||..||++|||+.|++.|..
T Consensus       269 i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~  339 (420)
T 1j1b_A          269 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  339 (420)
T ss_dssp             HHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence            111100          00000000000000     011112346889999999999999999999998854

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.64  E-value=1.6e-16  Score=121.50  Aligned_cols=121  Identities=21%  Similarity=0.175  Sum_probs=72.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcc-cceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIK-SDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~-~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....   ........|+..|+|||++.+..+..+ +||||+|++ +++++|+.||.....  .......
T Consensus       156 ~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~  230 (361)
T 3uc3_A          156 RLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE--PRDYRKT  230 (361)
T ss_dssp             CEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC------CCCHHHH
T ss_pred             eEEEeecCccccccc---cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc--HHHHHHH
Confidence            489999999874321   112234578999999999988777655 899999987 899999999753221  1122222


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........ . .....       ......+.+|+.+||+.||++|||+.|+++|..-
T Consensus       231 ~~~~~~~~-~-~~~~~-------~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f  278 (361)
T 3uc3_A          231 IQRILSVK-Y-SIPDD-------IRISPECCHLISRIFVADPATRISIPEIKTHSWF  278 (361)
T ss_dssp             HHHHHTTC-C-CCCTT-------SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred             HHHHhcCC-C-CCCCc-------CCCCHHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence            22111111 0 11110       0112367889999999999999999999998653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.64  E-value=3.1e-16  Score=116.50  Aligned_cols=117  Identities=22%  Similarity=0.213  Sum_probs=78.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc---cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV---FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~---~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++.......  ......|+..|+|||.+.+..   ++.++||||+|++ +++++|..||...      ...
T Consensus       175 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------~~~  246 (298)
T 2zv2_A          175 HIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE------RIM  246 (298)
T ss_dssp             CEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS------SHH
T ss_pred             CEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc------cHH
Confidence            589999999986543221  123457899999999987654   3677999999987 8999999987421      111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..... ...... .....       ......+.+++.+||+.||++||++.||++|..
T Consensus       247 ~~~~~-~~~~~~-~~~~~-------~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          247 CLHSK-IKSQAL-EFPDQ-------PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHH-HHHCCC-CCCSS-------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             HHHHH-HhcccC-CCCCc-------cccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence            11111 111111 11110       011235888999999999999999999998753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.64  E-value=7.8e-17  Score=119.45  Aligned_cols=132  Identities=18%  Similarity=0.132  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++......  .......|+..|+|||.+.+.. ++.++||||+|++ +++++|..|+...  .........
T Consensus       139 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~--~~~~~~~~~  214 (292)
T 3o0g_A          139 ELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG--NDVDDQLKR  214 (292)
T ss_dssp             CEEECCCTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC--SSHHHHHHH
T ss_pred             CEEEeecccceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC--CCHHHHHHH
Confidence            58999999998653221  1223357889999999987765 7899999999987 8999888885321  111111111


Q ss_pred             HHHHHhcCCccccc--C-------------cccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELM--D-------------PVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ............+.  .             ..............+.+|+.+||+.||++|||+.|+++|-.-.
T Consensus       215 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  287 (292)
T 3o0g_A          215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccc
Confidence            11111111000000  0             0000001112234678999999999999999999999986543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.64  E-value=1.4e-16  Score=122.83  Aligned_cols=119  Identities=18%  Similarity=0.168  Sum_probs=81.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......   .....|+..|+|||++.+..++.++||||+||+ +++++|..||...      ......
T Consensus       189 ~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~------~~~~~~  259 (387)
T 1kob_A          189 SVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLETL  259 (387)
T ss_dssp             CEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHH
T ss_pred             ceEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC------CHHHHH
Confidence            489999999987543221   223478999999999998889999999999987 8999999987431      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .... .... .. ...    .......++.+|+.+||+.||++|||+.|+++|..-
T Consensus       260 ~~i~-~~~~-~~-~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  308 (387)
T 1kob_A          260 QNVK-RCDW-EF-DED----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL  308 (387)
T ss_dssp             HHHH-HCCC-CC-CSS----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred             HHHH-hCCC-CC-Ccc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence            1111 1110 01 111    111123468899999999999999999999998654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.63  E-value=4e-17  Score=122.88  Aligned_cols=130  Identities=12%  Similarity=0.092  Sum_probs=81.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......   .....|+..|+|||.+.+ ..++.++||||+|++ +++++|..|+.....  .......
T Consensus       169 ~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~--~~~~l~~  243 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVR  243 (330)
T ss_dssp             EEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS--HHHHHHH
T ss_pred             EEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCc--hHHHHHH
Confidence            579999999986543222   223468889999999876 568899999999987 899999998732211  1111110


Q ss_pred             HHHHHh---------cCCc--------------ccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWC---------EGEA--------------LELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~---------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......         ....              ..................++.+|+.+||+.||++|||+.|+++|..-
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  323 (330)
T 3nsz_A          244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF  323 (330)
T ss_dssp             HHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccH
Confidence            000000         0000              00000001111111234568899999999999999999999998654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.63  E-value=2.7e-17  Score=126.31  Aligned_cols=106  Identities=11%  Similarity=0.023  Sum_probs=74.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-----------ccCcccceeehhHH-HHHHhcCCCCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-----------VFSIKSDVFSFGVL-LEIVSGKRNSGFYL   69 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-----------~~~~~~diws~gv~-~~~~~g~~~~~~~~   69 (181)
                      ++||+|||+++...     ......+| ..|+|||++.+.           .++.++||||+||+ +++++|..||....
T Consensus       244 ~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~  317 (377)
T 3byv_A          244 GVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDA  317 (377)
T ss_dssp             CEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             CEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccc
Confidence            58999999998532     12234567 899999999877           78999999999987 89999999874321


Q ss_pred             CCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           70 SKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ....               ...... .. ..    ...++.+|+.+||+.||++|||+.|+++|.
T Consensus       318 ~~~~---------------~~~~~~-~~-~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp  361 (377)
T 3byv_A          318 ALGG---------------SEWIFR-SC-KN----IPQPVRALLEGFLRYPKEDRLLPLQAMETP  361 (377)
T ss_dssp             --CC---------------SGGGGS-SC-CC----CCHHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred             cccc---------------hhhhhh-hc-cC----CCHHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence            1110               000111 00 11    123688899999999999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.63  E-value=1.1e-16  Score=121.06  Aligned_cols=109  Identities=20%  Similarity=0.200  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......   .....|+..|+|||++.+..+ +.++||||+|++ +++++|..||......        
T Consensus       168 ~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------  236 (335)
T 3dls_A          168 TIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------  236 (335)
T ss_dssp             CEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------
T ss_pred             cEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------
Confidence            589999999986543222   234578999999999988776 678999999987 8999999997431110        


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                               .......      +.....++.+|+.+||+.||++|||+.+|++|..-
T Consensus       237 ---------~~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~  278 (335)
T 3dls_A          237 ---------VEAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV  278 (335)
T ss_dssp             ---------TTTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTT
T ss_pred             ---------HhhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence                     0000000      00112368899999999999999999999999664

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.63  E-value=3.9e-16  Score=116.86  Aligned_cols=131  Identities=24%  Similarity=0.253  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCC---CcccccccccCCCccCcccccc---------CccCcccceeehhHH-HHHHhcCCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQ---NEANTNRVVGTYGYMAPEYAME---------GVFSIKSDVFSFGVL-LEIVSGKRNSGFY   68 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~---~~~~~~~~~g~~~~~aPe~~~~---------~~~~~~~diws~gv~-~~~~~g~~~~~~~   68 (181)
                      .+||+|||+++......   .........|+..|+|||.+..         ..++.++||||+|++ +++++|..|+...
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            57999999986542111   1111223458889999999864         346788999999987 8999999887421


Q ss_pred             cCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCCCCCCC
Q 041917           69 LSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPPPTQP  147 (181)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~~~~~~  147 (181)
                            ........ .............        ...++.+++.+||..||++|||+.+|++.|+++.........|
T Consensus       247 ------~~~~~~~~-~~~~~~~~~~~~~--------~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~  310 (319)
T 2y4i_B          247 ------PAEAIIWQ-MGTGMKPNLSQIG--------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHP  310 (319)
T ss_dssp             ------CHHHHHHH-HHTTCCCCCCCSS--------CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----------
T ss_pred             ------CHHHHHHH-hccCCCCCCCcCC--------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCC
Confidence                  11111111 1111111111111        1124788999999999999999999999999987765444333

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.63  E-value=2.4e-16  Score=119.99  Aligned_cols=118  Identities=21%  Similarity=0.177  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++||||+||+ +++++|..||....    .   . .
T Consensus       171 ~vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~---~-~  240 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----E---R-L  240 (351)
T ss_dssp             CEEECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----H---H-H
T ss_pred             cEEEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----H---H-H
Confidence            48999999998654321  12234578999999999998889999999999987 89999999874311    1   1 1


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..........  ..+....    ....++.+|+.+||+.||++|||+.|+++|..
T Consensus       241 ~~~i~~~~~~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~  289 (351)
T 3c0i_A          241 FEGIIKGKYK--MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNHPW  289 (351)
T ss_dssp             HHHHHHTCCC--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             HHHHHcCCCC--CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence            1111111110  0110000    11236788999999999999999999998753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.63  E-value=2.8e-17  Score=121.78  Aligned_cols=121  Identities=28%  Similarity=0.322  Sum_probs=80.9

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++.......... .....++..|+|||.+.+..++.++||||+|++ +++++ |..|+....      ...
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~  228 (291)
T 1xbb_A          155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSE  228 (291)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHH
T ss_pred             cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC------HHH
Confidence            479999999986543322211 122345678999999988888899999999987 89998 888864321      111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      . ...........         .+......+.+++.+||+.||++||++.+|++.|+++.
T Consensus       229 ~-~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          229 V-TAMLEKGERMG---------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             H-HHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             H-HHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1 11111111111         11122346889999999999999999999999998753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.63  E-value=1e-16  Score=121.96  Aligned_cols=121  Identities=21%  Similarity=0.251  Sum_probs=74.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....   .......|+..|+|||++.+..++.++||||+||+ +++++|..|+....   ..   ...
T Consensus       189 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~---~~~  259 (349)
T 2w4o_A          189 PLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER---GD---QFM  259 (349)
T ss_dssp             CEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT---CH---HHH
T ss_pred             CEEEccCccccccCcc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc---cc---HHH
Confidence            5799999999864321   11234578999999999998889999999999987 89999999874211   11   111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......... ....+.     ......++.+|+.+||+.||++|||+.|+++|..-.
T Consensus       260 ~~~i~~~~~-~~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  310 (349)
T 2w4o_A          260 FRRILNCEY-YFISPW-----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT  310 (349)
T ss_dssp             HHHHHTTCC-CCCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTT
T ss_pred             HHHHHhCCC-ccCCch-----hhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence            111111111 111111     111224688999999999999999999999986654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.63  E-value=1.3e-16  Score=117.90  Aligned_cols=115  Identities=20%  Similarity=0.194  Sum_probs=77.0

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      +||+|||++.....      .....|+..|+|||.+.+ ..++.++||||+|++ +++++|..++...     .......
T Consensus       160 ~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~-----~~~~~~~  228 (289)
T 4fvq_A          160 IKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-----LDSQRKL  228 (289)
T ss_dssp             EEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT-----SCHHHHH
T ss_pred             eeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc-----cchHHHH
Confidence            89999998864311      122457888999999987 668899999999987 8999976554221     1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      .......   ..... .        ..++.+++.+||+.||++|||+.+|+++|+++...
T Consensus       229 ~~~~~~~---~~~~~-~--------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          229 QFYEDRH---QLPAP-K--------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             HHHHTTC---CCCCC-S--------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             HHhhccC---CCCCC-C--------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            1111111   11111 1        12478899999999999999999999999998664

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.2e-16  Score=120.35  Aligned_cols=119  Identities=19%  Similarity=0.149  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......|++.|+|||++.+..++.++||||+|++ +++++|..||...      ......
T Consensus       142 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~  212 (321)
T 1tki_A          142 TIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE------TNQQII  212 (321)
T ss_dssp             CEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHH
T ss_pred             CEEEEECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC------CHHHHH
Confidence            57999999998653221   2234578999999999988888999999999987 8999999987431      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..... ... .. ......    ....++.+++.+||..||++|||+.|+++|..-
T Consensus       213 ~~i~~-~~~-~~-~~~~~~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~  261 (321)
T 1tki_A          213 ENIMN-AEY-TF-DEEAFK----EISIEAMDFVDRLLVKERKSRMTASEALQHPWL  261 (321)
T ss_dssp             HHHHH-TCC-CC-CHHHHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred             HHHHc-CCC-CC-Chhhhc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcChhh
Confidence            11111 111 00 000000    112368899999999999999999999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.63  E-value=1.1e-17  Score=122.70  Aligned_cols=120  Identities=30%  Similarity=0.308  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...... ........++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       144 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~------~~~~~  216 (269)
T 4hcu_A          144 VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEV  216 (269)
T ss_dssp             CEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHH
T ss_pred             CEEeccccccccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC------CHHHH
Confidence            57999999997543211 111122345677999999988889999999999987 89998 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ... .....  ....       +......+.+++.+||+.||++||++.+++++|+++.
T Consensus       217 ~~~-~~~~~--~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          217 VED-ISTGF--RLYK-------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             HHH-HHTTC--CCCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHH-HhcCc--cCCC-------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            111 11110  0011       1111246888999999999999999999999998753

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.63  E-value=2e-16  Score=124.05  Aligned_cols=117  Identities=18%  Similarity=0.156  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....  ........+|+..|+|||++.+..++.++||||+|++ +++++|..||...      ......
T Consensus       287 ~~kl~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~  358 (446)
T 4ejn_A          287 HIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLF  358 (446)
T ss_dssp             CEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEccCCCceeccC--CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC------CHHHHH
Confidence            589999999875322  1222334689999999999998889999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~~  137 (181)
                      ..... ... .+.         .....++.+|+.+||+.||++||     ++.|+++|..-.
T Consensus       359 ~~i~~-~~~-~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~  409 (446)
T 4ejn_A          359 ELILM-EEI-RFP---------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA  409 (446)
T ss_dssp             HHHHH-CCC-CCC---------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             HHHHh-CCC-CCC---------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence            11111 111 111         11224688999999999999999     999999986543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.63  E-value=2.1e-16  Score=117.97  Aligned_cols=123  Identities=23%  Similarity=0.310  Sum_probs=74.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........  ......|+..|+|||.+.+..++.++|||++|++ +++++|..|+...    ........
T Consensus       174 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~----~~~~~~~~  247 (310)
T 2wqm_A          174 VVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD----KMNLYSLC  247 (310)
T ss_dssp             CEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCHHHHH
T ss_pred             CEEEEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc----chhHHHHH
Confidence            579999999875432211  1223468889999999988889999999999987 8999999887421    11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      . ............    .    ....++.+++.+||+.||.+||++.+|+++|+++..
T Consensus       248 ~-~~~~~~~~~~~~----~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          248 K-KIEQCDYPPLPS----D----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             H-HHHTTCSCCCCT----T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H-HhhcccCCCCcc----c----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            1 111111111110    1    112368889999999999999999999999987643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.63  E-value=1.3e-16  Score=122.64  Aligned_cols=128  Identities=16%  Similarity=0.115  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......   .....|+..|+|||.+.+.. ++.++||||+||+ +++++|..||....   .......
T Consensus       180 ~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~  253 (383)
T 3eb0_A          180 TLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET---SIDQLVR  253 (383)
T ss_dssp             EEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             cEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCC---hHHHHHH
Confidence            479999999986533222   22347889999999987654 8899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcC----------Cccc-----ccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEG----------EALE-----LMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~----------~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........          ....     ..........+......+.+|+.+||+.||++|||+.|+++|-.
T Consensus       254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (383)
T 3eb0_A          254 IIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF  324 (383)
T ss_dssp             HHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHH
Confidence            11110000          0000     00000011111223346889999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.63  E-value=2e-16  Score=119.83  Aligned_cols=126  Identities=19%  Similarity=0.205  Sum_probs=81.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+..++.++||||+|++ +++++|..||.....   .......
T Consensus       180 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~~~~  251 (355)
T 2eu9_A          180 SIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN---REHLVMM  251 (355)
T ss_dssp             CEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHH
T ss_pred             cEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH
Confidence            5799999999763221     223578999999999998889999999999987 899999998743211   1111111


Q ss_pred             HHHHhcCCccccc------------------------------Ccc-cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           81 WKLWCEGEALELM------------------------------DPV-LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        81 ~~~~~~~~~~~~~------------------------------~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                      ..... .....+.                              .+. ...........++.+|+.+||+.||++|||+.|
T Consensus       252 ~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          252 EKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence            11110 0000000                              000 000112234557889999999999999999999


Q ss_pred             HHHHhhc
Q 041917          130 VVVMLAS  136 (181)
Q Consensus       130 vl~~L~~  136 (181)
                      |++|-.-
T Consensus       331 ~l~hp~f  337 (355)
T 2eu9_A          331 ALLHPFF  337 (355)
T ss_dssp             HTTSGGG
T ss_pred             HhcChhh
Confidence            9988554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.63  E-value=4.1e-16  Score=114.92  Aligned_cols=118  Identities=17%  Similarity=0.193  Sum_probs=80.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......|+..|+|||.+.+..++.++||||+|++ +++++|..|+...      ......
T Consensus       146 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------~~~~~~  216 (284)
T 3kk8_A          146 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE------DQHRLY  216 (284)
T ss_dssp             CEEECCCTTCEECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             cEEEeeceeeEEcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC------chhHHH
Confidence            48999999997653221   1233578999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ..... .....+..     .....++.+++.+||+.||++|||+.|+++|..
T Consensus       217 ~~-~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  264 (284)
T 3kk8_A          217 AQ-IKAGA-YDYPSPEW-----DTVTPEAKSLIDSMLTVNPKKRITADQALKVPW  264 (284)
T ss_dssp             HH-HHHTC-CCCCTTTT-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred             HH-HHhcc-ccCCchhh-----cccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence            11 11111 11111110     111235788999999999999999999999854

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.63  E-value=2.2e-16  Score=118.86  Aligned_cols=125  Identities=21%  Similarity=0.191  Sum_probs=81.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+..++.++||||+|++ +++++|..|+.....   .......
T Consensus       175 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~~~~  246 (339)
T 1z57_A          175 DIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS---KEHLAMM  246 (339)
T ss_dssp             CEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH---HHHHHHH
T ss_pred             CceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh---HHHHHHH
Confidence            4799999999763221     223578999999999998889999999999987 899999998753211   1111111


Q ss_pred             HHHHhcCCcccc------------------------------cCccc-ccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 041917           81 WKLWCEGEALEL------------------------------MDPVL-KQSCVGAELLKYIHIGLLCVQEDPARRPSMSS  129 (181)
Q Consensus        81 ~~~~~~~~~~~~------------------------------~~~~~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e  129 (181)
                      ..... .....+                              ..+.. ...........+.+|+.+||+.||++|||+.|
T Consensus       247 ~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          247 ERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            11110 000000                              00000 00112344567899999999999999999999


Q ss_pred             HHHHhh
Q 041917          130 VVVMLA  135 (181)
Q Consensus       130 vl~~L~  135 (181)
                      |++|-.
T Consensus       326 ll~hp~  331 (339)
T 1z57_A          326 ALKHPF  331 (339)
T ss_dssp             HTTSGG
T ss_pred             HhcCHH
Confidence            998843

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=3.5e-16  Score=118.77  Aligned_cols=132  Identities=18%  Similarity=0.153  Sum_probs=81.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++......  .......|+..|+|||.+.+. .++.++||||+|++ +++++|..++...   ........
T Consensus       150 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~---~~~~~~~~  224 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD---SDLDQLTR  224 (346)
T ss_dssp             CEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHH
T ss_pred             CEEEEecccceeccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC---CHHHHHHH
Confidence            58999999997543221  122345789999999998654 47889999999987 8999988776321   11111111


Q ss_pred             HHHHHhcCCccccc------Cccc---ccCCc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELM------DPVL---KQSCV-----GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~------~~~~---~~~~~-----~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ............+.      +...   ....+     ......+.+|+.+||+.||++|||+.|+++|..-..
T Consensus       225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          225 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             HHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence            11111111100000      0000   00001     112346889999999999999999999999976543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=4.6e-17  Score=123.04  Aligned_cols=122  Identities=25%  Similarity=0.317  Sum_probs=75.9

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......++..|+|||.+.+..++.++||||+|++ +++++ |..|+....      ...
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~  258 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS------NHE  258 (333)
T ss_dssp             CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHH
T ss_pred             cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC------HHH
Confidence            58999999998653322111 1122345678999999988889999999999987 88898 888863211      111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      . ...........         .+......+.+++.+||+.||++||++.+|+++|+++..
T Consensus       259 ~-~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          259 V-MKAINDGFRLP---------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             H-HHHHHTTCCCC---------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             H-HHHHHCCCcCC---------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            1 11111111100         011122468889999999999999999999999987644

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.62  E-value=4.4e-17  Score=119.93  Aligned_cols=116  Identities=27%  Similarity=0.252  Sum_probs=75.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||++......     .....++..|+|||.+.+..++.++|||++|++ +++++ |..|+....   .....  
T Consensus       155 ~~~l~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~---~~~~~--  224 (278)
T 1byg_A          155 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---LKDVV--  224 (278)
T ss_dssp             CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC---GGGHH--
T ss_pred             cEEEeecccccccccc-----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC---HHHHH--
Confidence            5799999998754321     112356788999999988888999999999987 89998 887764321   11111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                        ........     .    ..+......+.+++.+||+.||++||++.+|++.|+++.
T Consensus       225 --~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          225 --PRVEKGYK-----M----DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             --HHHTTTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HHHhcCCC-----C----CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence              11111110     1    111122346888999999999999999999999998753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.62  E-value=1.3e-16  Score=118.07  Aligned_cols=130  Identities=22%  Similarity=0.248  Sum_probs=77.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++......  .......|+..|+|||++.+. .++.++||||+|++ +++++|..||....   .......
T Consensus       138 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~  212 (288)
T 1ob3_A          138 ELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS---EADQLMR  212 (288)
T ss_dssp             CEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CEEEeECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            58999999987543211  112234689999999998764 47899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCCcccc--------cCcccc-------cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALEL--------MDPVLK-------QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~--------~~~~~~-------~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ............+        .++...       .........++.+++.+||+.||++|||+.|+++|..-
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  284 (288)
T 1ob3_A          213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (288)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence            1111111000000        000000       00111123467899999999999999999999988643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.62  E-value=1.5e-17  Score=123.53  Aligned_cols=124  Identities=27%  Similarity=0.323  Sum_probs=80.5

Q ss_pred             CceeeceecceeecCCCC--cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~--~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++.......  ........++..|+|||.+.+..++.++|+||+|++ +++++|..++...  ........
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~  243 (298)
T 3f66_A          166 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFDITV  243 (298)
T ss_dssp             CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--SCTTTHHH
T ss_pred             CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc--CCHHHHHH
Confidence            589999999976532211  111223456778999999988889999999999987 8999966554221  11122211


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      .   .. .... . ..+   ..    ....+.+++.+||+.||++||++.+|++.|+.+...
T Consensus       244 ~---~~-~~~~-~-~~~---~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          244 Y---LL-QGRR-L-LQP---EY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             H---HH-TTCC-C-CCC---TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             H---Hh-cCCC-C-CCC---cc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            1   11 1110 0 001   11    123588899999999999999999999999876544

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.62  E-value=3.6e-18  Score=128.30  Aligned_cols=130  Identities=22%  Similarity=0.235  Sum_probs=82.8

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCC------CC
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK------DG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~------~~   73 (181)
                      .+||+|||+++......... ......++..|+|||.+.+..++.++|||++|++ +++++|..|+......      ..
T Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  251 (318)
T 3lxp_A          172 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA  251 (318)
T ss_dssp             CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred             CEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccc
Confidence            58999999998764332211 1223457778999999988888999999999987 8999998886421100      00


Q ss_pred             cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           74 HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .......       .....+........+......+.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus       252 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          252 QGQMTVL-------RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             CHHHHHH-------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHH-------HHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            0000000       000011111111112223346889999999999999999999999998764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.62  E-value=3.4e-16  Score=115.68  Aligned_cols=116  Identities=26%  Similarity=0.287  Sum_probs=73.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......|+..|+|||.+. ..++.++||||+|++ +++++|..|+...      ......
T Consensus       165 ~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~------~~~~~~  234 (285)
T 3is5_A          165 PIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT------SLEEVQ  234 (285)
T ss_dssp             CEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEEeeecceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            47999999997643221   123357889999999875 457889999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..............    ..    ...++.+++.+||+.||++|||+.||++|-.
T Consensus       235 ~~~~~~~~~~~~~~----~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  281 (285)
T 3is5_A          235 QKATYKEPNYAVEC----RP----LTPQAVDLLKQMLTKDPERRPSAAQVLHHEW  281 (285)
T ss_dssp             HHHHHCCCCCCC------CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred             hhhccCCccccccc----Cc----CCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence            11111111100000    00    1235788999999999999999999998754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.62  E-value=1.2e-16  Score=120.43  Aligned_cols=131  Identities=18%  Similarity=0.128  Sum_probs=76.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.......  ......|+..|+|||++.+.. ++.++||||+||+ +++++|..||....   .......
T Consensus       175 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~  249 (329)
T 3gbz_A          175 VLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS---EIDQLFK  249 (329)
T ss_dssp             EEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             eEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC---HHHHHHH
Confidence            389999999976532211  123346789999999987644 7899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCCccccc----------------CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELM----------------DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ............+.                ...+..........++.+|+.+||+.||++|||+.|+++|-.-.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  323 (329)
T 3gbz_A          250 IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS  323 (329)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccC
Confidence            11111100000000                00000000011234678999999999999999999999987654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.62  E-value=1.8e-16  Score=120.57  Aligned_cols=130  Identities=15%  Similarity=0.122  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......   .....|+..|+|||++.+.. ++.++||||+|++ +++++|..||....   .......
T Consensus       170 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~---~~~~~~~  243 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN---SAGQLHE  243 (360)
T ss_dssp             EEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             cEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC---hHHHHHH
Confidence            579999999986543222   22346889999999986654 7899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCC------------cccccCc-c-----cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGE------------ALELMDP-V-----LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~------------~~~~~~~-~-----~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .........            ....... .     ...........++.+|+.+||+.||++|||+.||++|..-.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  319 (360)
T 3e3p_A          244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD  319 (360)
T ss_dssp             HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGG
T ss_pred             HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccc
Confidence            111100000            0000000 0     00011111345789999999999999999999999986543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.62  E-value=1.5e-17  Score=122.62  Aligned_cols=119  Identities=26%  Similarity=0.282  Sum_probs=79.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...... ........++..|+|||.+.+..++.++|||++|++ +++++ |..|+....      ....
T Consensus       158 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~------~~~~  230 (283)
T 3gen_A          158 VVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT------NSET  230 (283)
T ss_dssp             CEEECSTTGGGGBCCHH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHH
T ss_pred             CEEEccccccccccccc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC------hhHH
Confidence            58999999997543211 111122345677999999988889999999999987 89998 888864221      1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ...... . ...       +......+.+++.+||+.||.+|||+.+|+++|+.+
T Consensus       231 ~~-~~~~~~-~-~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          231 AE-HIAQGL-R-LYR-------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             HH-HHHTTC-C-CCC-------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH-HHhccc-C-CCC-------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            11 111111 0 001       111123688899999999999999999999999865

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.62  E-value=3.2e-16  Score=115.38  Aligned_cols=114  Identities=21%  Similarity=0.231  Sum_probs=76.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++.....    .......|+..|+|||.+.+..++.++|||++|++ +++++|..|+...      ......
T Consensus       147 ~~~l~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~  216 (279)
T 3fdn_A          147 ELKIADFGWSVHAPS----SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------TYQETY  216 (279)
T ss_dssp             CEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHH
T ss_pred             CEEEEeccccccCCc----ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC------cHHHHH
Confidence            579999998864322    11233578999999999988888899999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ...... ..         +......+.+++.+||+.||++|||+.||++|..-
T Consensus       217 ~~-~~~~~~-~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~  261 (279)
T 3fdn_A          217 KR-ISRVEF-TF---------PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI  261 (279)
T ss_dssp             HH-HHHTCC-CC---------CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHH
T ss_pred             HH-HHhCCC-CC---------CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccc
Confidence            11 111110 11         11112357889999999999999999999999654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.62  E-value=1.9e-16  Score=117.65  Aligned_cols=127  Identities=22%  Similarity=0.300  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCCCc-ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCc--------CC
Q 041917            2 NPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYL--------SK   71 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~--------~~   71 (181)
                      ++||+|||+++........ .......|+..|+|||.+.+..++.++||||+|++ +++++|..|+....        ..
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  243 (302)
T 4e5w_A          164 QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT  243 (302)
T ss_dssp             EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred             CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCc
Confidence            4799999999876433221 12233467778999999988888999999999987 89999987642210        00


Q ss_pred             CCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           72 DGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .................         ....+......+.+++.+||+.||.+|||+.+|++.|+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          244 HGQMTVTRLVNTLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             CGGGHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            01111111111111111         1111222234688999999999999999999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.62  E-value=7.5e-17  Score=120.73  Aligned_cols=126  Identities=17%  Similarity=0.168  Sum_probs=80.9

Q ss_pred             CceeeceecceeecCCCCc-------ccccccccCCCccCccccccCc---cCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQNE-------ANTNRVVGTYGYMAPEYAMEGV---FSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-------~~~~~~~g~~~~~aPe~~~~~~---~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      .+||+|||++.........       .......|+..|+|||.+....   ++.++|||++|++ +++++|..|+.....
T Consensus       172 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  251 (317)
T 2buj_A          172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ  251 (317)
T ss_dssp             CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH
T ss_pred             CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc
Confidence            5799999988753211110       0012235788999999987543   6789999999987 899999988732111


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                      .. ......    ....  .....       .......+.+++.+||+.||.+||++.+|+++|+.+....
T Consensus       252 ~~-~~~~~~----~~~~--~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          252 KG-DSVALA----VQNQ--LSIPQ-------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             TT-SCHHHH----HHCC----CCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred             cc-chhhHH----hhcc--CCCCc-------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence            11 111110    0100  00000       1112246889999999999999999999999999986543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.62  E-value=5.8e-16  Score=114.59  Aligned_cols=116  Identities=21%  Similarity=0.291  Sum_probs=77.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++......    ......|+..|+|||.+.+ .++.++||||+|++ +++++|..|+...     .......
T Consensus       170 ~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~  239 (290)
T 1t4h_A          170 SVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-----QNAAQIY  239 (290)
T ss_dssp             CEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-----SSHHHHH
T ss_pred             CEEEeeCCCccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCc-----CcHHHHH
Confidence            5799999998653221    1223578999999998764 58899999999987 8999999887421     1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ..........    ....    ....++.+++.+||+.||.+|||+.+|++|..-
T Consensus       240 -~~~~~~~~~~----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f  286 (290)
T 1t4h_A          240 -RRVTSGVKPA----SFDK----VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             -HHHTTTCCCG----GGGG----CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             -HHHhccCCcc----ccCC----CCCHHHHHHHHHHccCChhhCCCHHHHhhCccc
Confidence             1111111111    1111    112358899999999999999999999998653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.62  E-value=2.7e-16  Score=116.26  Aligned_cols=123  Identities=24%  Similarity=0.270  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......++..|+|||.+.+..++.++|||++|++ +++++ |..|+...      ....
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~  232 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL------NGSQ  232 (291)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHH
T ss_pred             CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC------CHHH
Confidence            47999999998654332211 1223456778999999988888999999999987 89998 88886422      1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .............         .+......+.+++.+||+.||++||++.+|+++|++...
T Consensus       233 ~~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          233 ILHKIDKEGERLP---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             HHHHHHTSCCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHccCCCCC---------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            1111111111100         111123468899999999999999999999999998754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.62  E-value=4.1e-17  Score=122.87  Aligned_cols=120  Identities=26%  Similarity=0.229  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....   ........++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       180 ~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~------~~~~~  250 (327)
T 1fvr_A          180 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM------TCAEL  250 (327)
T ss_dssp             CEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHH
T ss_pred             eEEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC------cHHHH
Confidence            579999999874221   111122356778999999988888999999999987 89997 88886321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                       .........     .    ..+......+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus       251 -~~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          251 -YEKLPQGYR-----L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             -HHHGGGTCC-----C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             -HHHhhcCCC-----C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence             111111100     0    11112224688999999999999999999999999876554

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.61  E-value=8.7e-17  Score=125.19  Aligned_cols=120  Identities=23%  Similarity=0.255  Sum_probs=74.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+++.....   ......+|+..|+|||++.+   ..++.++||||+|++ +++++|..||.....  ...+.
T Consensus       280 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~  354 (419)
T 3i6u_A          280 LIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSLK  354 (419)
T ss_dssp             CEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS--SCCHH
T ss_pred             eEEEeecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc--hHHHH
Confidence            4899999999865321   12234578999999999853   557789999999987 899999999753221  11111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..    ...... ... +...    ......+.+++.+||+.||++||++.|+++|.+-
T Consensus       355 ~~----i~~~~~-~~~-~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  403 (419)
T 3i6u_A          355 DQ----ITSGKY-NFI-PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL  403 (419)
T ss_dssp             HH----HHTTCC-CCC-HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HH----HhcCCC-CCC-chhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCCccc
Confidence            11    111110 111 0000    0112368899999999999999999999998654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.61  E-value=1.6e-16  Score=124.14  Aligned_cols=123  Identities=26%  Similarity=0.292  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCCCcc--cccccccCCCccCcccccc-------CccCcccceeehhHH-HHHHh-cCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAME-------GVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~-------~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~   70 (181)
                      ++||+|||+++.........  ......|+..|+|||++.+       ..++.++||||+||+ +++++ |..|+.....
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            58999999998764322111  1234578999999999865       557889999999987 89998 7777632111


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                          ...    ......  ...  +............++.+++.+||+.||++|||+.+|++|..-
T Consensus       246 ----~~~----~i~~~~--~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f  299 (434)
T 2rio_A          246 ----RES----NIIRGI--FSL--DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF  299 (434)
T ss_dssp             ----HHH----HHHHTC--CCC--CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             ----hHH----HHhcCC--CCc--ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence                000    011111  000  011111233455678999999999999999999999987543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.61  E-value=1.9e-16  Score=118.84  Aligned_cols=130  Identities=22%  Similarity=0.216  Sum_probs=80.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.......  ......|+..|+|||++.+. .++.++||||+||+ +++++|..||....   .......
T Consensus       146 ~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~  220 (317)
T 2pmi_A          146 QLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN---DEEQLKL  220 (317)
T ss_dssp             CEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHH
Confidence            589999999986532211  12234789999999998764 57899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCC--ccccc------Cccc------------ccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGE--ALELM------DPVL------------KQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~--~~~~~------~~~~------------~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .........  ....+      .+..            ..........++.+|+.+||+.||++|||+.|+++|-.-
T Consensus       221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f  297 (317)
T 2pmi_A          221 IFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF  297 (317)
T ss_dssp             HHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             HHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhh
Confidence            111111000  00000      0000            000001122468899999999999999999999998554

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.61  E-value=5.9e-17  Score=119.69  Aligned_cols=119  Identities=26%  Similarity=0.322  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........ .......++..|+|||.+.+..++.++||||+|++ +++++ |..|+...   ........
T Consensus       149 ~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~---~~~~~~~~  224 (288)
T 3kfa_A          149 LVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYEL  224 (288)
T ss_dssp             CEEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC---CGGGHHHH
T ss_pred             CEEEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---CHHHHHHH
Confidence            579999999976532221 22223456778999999988889999999999987 89998 77776322   11111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          .......         ..+......+.+++.+||+.||++||++.+|++.|+..
T Consensus       225 ----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          225 ----LEKDYRM---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             ----HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HhccCCC---------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence                1111000         11111224688999999999999999999999998765

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.61  E-value=2.6e-16  Score=116.25  Aligned_cols=117  Identities=19%  Similarity=0.292  Sum_probs=69.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccc----ccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYA----MEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~----~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||+++.......   .....|+..|+|||.+    ....++.++||||+|++ +++++|..|+....    .. 
T Consensus       148 ~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~-  219 (290)
T 3fme_A          148 QVKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----TP-  219 (290)
T ss_dssp             CEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS----CH-
T ss_pred             CEEEeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC----ch-
Confidence            579999999976532211   2234688999999996    45567889999999987 89999998874211    11 


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........... .......        ....++.+++.+||+.||++|||+.||++|..
T Consensus       220 ~~~~~~~~~~~-~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~  269 (290)
T 3fme_A          220 FQQLKQVVEEP-SPQLPAD--------KFSAEFVDFTSQCLKKNSKERPTYPELMQHPF  269 (290)
T ss_dssp             HHHHHHHHHSC-CCCCCTT--------TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred             HHHHHHHhccC-CCCcccc--------cCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence            11111111111 1111111        11236889999999999999999999998754

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.61  E-value=1.1e-15  Score=114.34  Aligned_cols=125  Identities=16%  Similarity=0.141  Sum_probs=73.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++....... ........|+..|+|||.+.+..++.++|||++|++ +++++|..|+....      .. ..
T Consensus       172 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~-~~  243 (309)
T 2h34_A          172 FAYLVDFGIASATTDEK-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ------LS-VM  243 (309)
T ss_dssp             CEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH------HH-HH
T ss_pred             CEEEecCccCccccccc-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch------HH-HH
Confidence            57999999987543221 111223468889999999988888999999999987 89999998874311      11 11


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhcCCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-SMSSVVVMLASDTITL  141 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-t~~evl~~L~~~~~~~  141 (181)
                      ........ .. . ...    .......+.+++.+||+.||++|| ++.++++.|++.....
T Consensus       244 ~~~~~~~~-~~-~-~~~----~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          244 GAHINQAI-PR-P-STV----RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             HHHHHSCC-CC-G-GGT----STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             HHHhccCC-CC-c-ccc----CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            11111111 00 0 001    111123578899999999999999 9999999999875543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.61  E-value=1.4e-16  Score=121.54  Aligned_cols=116  Identities=21%  Similarity=0.167  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....  ........+|++.|+|||++.+..++.++|+||+||+ +++++|..||...      ......
T Consensus       162 ~ikL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~  233 (353)
T 3txo_A          162 HCKLADFGMCKEGIC--NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE------NEDDLF  233 (353)
T ss_dssp             CEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEccccceeeccc--CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC------CHHHHH
Confidence            589999999975321  1222345689999999999988889999999999987 8999999997432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM------SSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~------~evl~~L~~  136 (181)
                      .... .... ..         +......+.+++.+||..||++||++      .+|++|..-
T Consensus       234 ~~i~-~~~~-~~---------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f  284 (353)
T 3txo_A          234 EAIL-NDEV-VY---------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF  284 (353)
T ss_dssp             HHHH-HCCC-CC---------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGG
T ss_pred             HHHH-cCCC-CC---------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcc
Confidence            1111 1111 11         11122357889999999999999999      889988653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.61  E-value=8.2e-16  Score=121.47  Aligned_cols=114  Identities=22%  Similarity=0.288  Sum_probs=79.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....   ......+|++.|+|||++.+..+ +.++||||+|++ +++++|..||...   .   ....
T Consensus       154 ~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~---~---~~~~  224 (476)
T 2y94_A          154 NAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD---H---VPTL  224 (476)
T ss_dssp             CEEECCCSSCEECCTT---CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS---S---SHHH
T ss_pred             CeEEEeccchhhcccc---ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC---C---HHHH
Confidence            5899999999865322   12234579999999999988765 578999999987 8999999987421   1   1111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ... ..... ...         +.....++.+++.+||..||++|||+.||++|..
T Consensus       225 ~~~-i~~~~-~~~---------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~  269 (476)
T 2y94_A          225 FKK-ICDGI-FYT---------PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEW  269 (476)
T ss_dssp             HHH-HHTTC-CCC---------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             HHH-HhcCC-cCC---------CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHH
Confidence            111 11111 111         1111236788999999999999999999998743

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.61  E-value=3.6e-16  Score=118.94  Aligned_cols=115  Identities=26%  Similarity=0.314  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++....      .....|+..|+|||++.   ...++.++||||+|++ +++++|..|+...      ...
T Consensus       192 ~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~------~~~  259 (348)
T 1u5q_A          192 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAM  259 (348)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHH
T ss_pred             CEEEeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChH
Confidence            579999999875421      12357899999999984   4568889999999987 8999999887422      111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......... .......    .    .....+.+++.+||+.||++|||+.+|++|..-.
T Consensus       260 ~~~~~~~~~-~~~~~~~----~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          260 SALYHIAQN-ESPALQS----G----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             HHHHHHHHS-CCCCCCC----T----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHHhc-CCCCCCC----C----CCCHHHHHHHHHHcccChhhCcCHHHHhhChhhh
Confidence            111111111 1111111    1    1123578899999999999999999999987654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.61  E-value=4.4e-17  Score=122.46  Aligned_cols=116  Identities=21%  Similarity=0.273  Sum_probs=76.5

Q ss_pred             CceeeceecceeecCCCCc----------ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQNE----------ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~----------~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      .+||+|||+++........          .......|+..|+|||.+.+..++.++||||+|++ +++++|..++.    
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~----  277 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM----  277 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH----
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh----
Confidence            5899999999876432211          11233578999999999998889999999999987 89998765421    


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                          ..... .........     +    .........+.+++.+||+.||++|||+.||++|..
T Consensus       278 ----~~~~~-~~~~~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~  328 (332)
T 3qd2_B          278 ----ERVRI-ITDVRNLKF-----P----LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI  328 (332)
T ss_dssp             ----HHHHH-HHHHHTTCC-----C----HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred             ----HHHHH-HHHhhccCC-----C----cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchh
Confidence                00000 111111100     0    111223346788999999999999999999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.61  E-value=8.5e-16  Score=115.55  Aligned_cols=113  Identities=22%  Similarity=0.192  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....     .....+|++.|+|||++.+..++.++|+||+|++ +++++|..||...      ......
T Consensus       144 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~  212 (318)
T 1fot_A          144 HIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS------NTMKTY  212 (318)
T ss_dssp             CEEECCCSSCEECSS-----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHH
T ss_pred             CEEEeecCcceecCC-----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            589999999986432     1234579999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~  136 (181)
                      ..... ... .+         +.....++.+++.+||..||++||     ++.+|+.|-.-
T Consensus       213 ~~i~~-~~~-~~---------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f  262 (318)
T 1fot_A          213 EKILN-AEL-RF---------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF  262 (318)
T ss_dssp             HHHHH-CCC-CC---------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             HHHHh-CCC-CC---------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccc
Confidence            11111 111 11         111223688899999999999999     99999988654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.61  E-value=2.8e-16  Score=119.46  Aligned_cols=123  Identities=20%  Similarity=0.269  Sum_probs=81.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc--chHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH--SLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~--~~~~   78 (181)
                      ++||+|||+++.....  .......+|++.|+|||++.+..++.++|+||+||+ +++++|..||.........  ....
T Consensus       148 ~~kL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  225 (345)
T 3a8x_A          148 HIKLTDYGMCKEGLRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  225 (345)
T ss_dssp             CEEECCGGGCBCSCCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHH
T ss_pred             CEEEEeccccccccCC--CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHH
Confidence            5899999999753221  122345689999999999998889999999999987 8999999998532111110  1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM------SSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~------~evl~~L~~  136 (181)
                      ........... .+         +.....++.+++.+||+.||++||++      .+++.|-.-
T Consensus       226 ~~~~~i~~~~~-~~---------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f  279 (345)
T 3a8x_A          226 YLFQVILEKQI-RI---------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  279 (345)
T ss_dssp             HHHHHHHHCCC-CC---------CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred             HHHHHHHcCCC-CC---------CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence            11111111111 11         11123468889999999999999996      789988653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.61  E-value=3.9e-16  Score=121.99  Aligned_cols=120  Identities=24%  Similarity=0.272  Sum_probs=74.0

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++....... ........|+..|+|||++.+   ..++.++||||+||+ +++++ |..|+...    ...
T Consensus       161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~----~~~  236 (432)
T 3p23_A          161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS----LQR  236 (432)
T ss_dssp             CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST----TTH
T ss_pred             eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh----hHH
Confidence            478999999986542211 122334679999999999873   456678999999987 89999 77776321    111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .   ..... .........      ........+.+|+.+||+.||++|||+.+|++|..
T Consensus       237 ~---~~~~~-~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~  286 (432)
T 3p23_A          237 Q---ANILL-GACSLDCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF  286 (432)
T ss_dssp             H---HHHHT-TCCCCTTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTT
T ss_pred             H---HHHHh-ccCCccccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcc
Confidence            1   01111 110111111      11233445788999999999999999999998754

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.61  E-value=5.9e-16  Score=118.61  Aligned_cols=129  Identities=19%  Similarity=0.110  Sum_probs=73.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....   .......|+..|+|||++.+..++.++||||+||+ +++++|..||.....   .......
T Consensus       165 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i  238 (371)
T 2xrw_A          165 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWNKV  238 (371)
T ss_dssp             CEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHH
T ss_pred             CEEEEEeecccccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH
Confidence            5899999999764321   11233578999999999998889999999999987 899999988743211   0000000


Q ss_pred             HH-------------------HHhcCCcc------cccCccc-c--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WK-------------------LWCEGEAL------ELMDPVL-K--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~-------------------~~~~~~~~------~~~~~~~-~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      ..                   ........      ..+.... .  ..........+.+|+.+||..||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            00                   00000000      0000000 0  0011223457889999999999999999999999


Q ss_pred             Hhhc
Q 041917          133 MLAS  136 (181)
Q Consensus       133 ~L~~  136 (181)
                      |..-
T Consensus       319 hp~~  322 (371)
T 2xrw_A          319 HPYI  322 (371)
T ss_dssp             SHHH
T ss_pred             Ccch
Confidence            8653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.61  E-value=1.9e-17  Score=121.86  Aligned_cols=119  Identities=24%  Similarity=0.214  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......  .......|+..|+|||.+.+..++.++|||++|++ +++++|..|+....      .... 
T Consensus       154 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~-  224 (279)
T 2w5a_A          154 NVKLGDFGLARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKEL-  224 (279)
T ss_dssp             CEEECCCCHHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHH-
T ss_pred             CEEEecCchheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC------HHHH-
Confidence            58999999987643211  11223468899999999988888999999999987 89999998874321      1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ...........+         +.....++.+++.+||+.||++||++.||+++++...
T Consensus       225 ~~~i~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          225 AGKIREGKFRRI---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             HHHHHHTCCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             HHHHhhcccccC---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            111111111111         1112246888999999999999999999999987653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.61  E-value=1e-15  Score=121.16  Aligned_cols=118  Identities=21%  Similarity=0.173  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......|++.|+|||++.+ .++.++||||+||+ +++++|..||...      ......
T Consensus       162 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~  231 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK------NEYDIL  231 (486)
T ss_dssp             CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            58999999997543221   2234578999999999875 48899999999987 8999999987432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .... ..... ...+.     ......++.+++.+||+.||++|||+.|+++|..-
T Consensus       232 ~~i~-~~~~~-~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~  280 (486)
T 3mwu_A          232 KRVE-TGKYA-FDLPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI  280 (486)
T ss_dssp             HHHH-HTCCC-SCSGG-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHH
T ss_pred             HHHH-hCCCC-CCCcc-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhh
Confidence            1111 11110 00110     01122467899999999999999999999998543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.61  E-value=4.3e-16  Score=115.77  Aligned_cols=126  Identities=21%  Similarity=0.262  Sum_probs=79.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++...... ........|+..|+|||.+.+..++.++||||+|++ +++++|..||...      ......
T Consensus       149 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~------~~~~~~  221 (294)
T 4eqm_A          149 TLKIFDFGIAKALSETS-LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE------TAVSIA  221 (294)
T ss_dssp             CEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS------CHHHHH
T ss_pred             CEEEEeCCCcccccccc-ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC------ChHHHH
Confidence            58999999987543221 111233578999999999998888999999999987 8999999987432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhcCCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-SMSSVVVMLASDTIT  140 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-t~~evl~~L~~~~~~  140 (181)
                      ..... ...... ......    .....+.+++.+||+.||++|| ++.++.+.|+.....
T Consensus       222 ~~~~~-~~~~~~-~~~~~~----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          222 IKHIQ-DSVPNV-TTDVRK----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             HHHHS-SCCCCH-HHHSCT----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             HHHhh-ccCCCc-chhccc----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence            11111 111110 011111    1224678899999999999999 899999999887554

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.61  E-value=3e-16  Score=117.36  Aligned_cols=120  Identities=23%  Similarity=0.291  Sum_probs=72.3

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....... ........|+..|+|||.+.+..++.++||||+|++ +++++|..||...      .....
T Consensus       154 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~------~~~~~  227 (311)
T 3ork_A          154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD------SPVSV  227 (311)
T ss_dssp             CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHH
T ss_pred             CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC------ChHHH
Confidence            579999999976533211 112233578999999999998889999999999987 8999999987421      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ...........   .....    ......+.+++.+||+.||++||++.+++.+.
T Consensus       228 ~~~~~~~~~~~---~~~~~----~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~  275 (311)
T 3ork_A          228 AYQHVREDPIP---PSARH----EGLSADLDAVVLKALAKNPENRYQTAAEMRAD  275 (311)
T ss_dssp             HHHHHHCCCCC---HHHHS----TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred             HHHHhcCCCCC---ccccc----CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHH
Confidence            11211111110   00000    11123578899999999999999888777663

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.61  E-value=3.8e-16  Score=122.75  Aligned_cols=60  Identities=30%  Similarity=0.429  Sum_probs=42.1

Q ss_pred             CceeeceecceeecCCCCc-------------------------ccccccccCCCccCcccc-ccCccCcccceeehhHH
Q 041917            2 NPKISDFGMARIFGGNQNE-------------------------ANTNRVVGTYGYMAPEYA-MEGVFSIKSDVFSFGVL   55 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-------------------------~~~~~~~g~~~~~aPe~~-~~~~~~~~~diws~gv~   55 (181)
                      ++||+|||+++........                         ......+||+.|+|||++ ....|+.++||||+||+
T Consensus       194 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i  273 (458)
T 3rp9_A          194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI  273 (458)
T ss_dssp             CEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence            6899999999865321110                         112345789999999986 45668999999999987


Q ss_pred             -HHHHhc
Q 041917           56 -LEIVSG   61 (181)
Q Consensus        56 -~~~~~g   61 (181)
                       +++++|
T Consensus       274 l~elltg  280 (458)
T 3rp9_A          274 FAELLNM  280 (458)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHh
Confidence             899984

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.61  E-value=5.8e-16  Score=116.30  Aligned_cols=119  Identities=15%  Similarity=0.132  Sum_probs=81.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......   .....|+..|+|||.+.+..++.++||||+|++ +++++|..|+...      ......
T Consensus       157 ~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~  227 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETL  227 (321)
T ss_dssp             CEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHH
T ss_pred             CEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC------CHHHHH
Confidence            589999999986543221   233468999999999988889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ..... .. ..+...    ......+.+++.+||+.||++|||+.|++.|..-
T Consensus       228 ~~-i~~~~-~~-~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~  276 (321)
T 2a2a_A          228 AN-ITSVS-YD-FDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI  276 (321)
T ss_dssp             HH-HHTTC-CC-CCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTT
T ss_pred             HH-HHhcc-cc-cChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence            11 11110 00 111110    1112357889999999999999999999998654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.61  E-value=4e-16  Score=120.16  Aligned_cols=118  Identities=23%  Similarity=0.270  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++.....   ......+|++.|+|||++..   ..++.++|+||+||+ +++++|..||......   ...
T Consensus       153 ~vkL~DFG~a~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---~~~  226 (384)
T 4fr4_A          153 HVHITDFNIAAMLPRE---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST---SSK  226 (384)
T ss_dssp             CEEECCCTTCEECCTT---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS---CHH
T ss_pred             CEEEeccceeeeccCC---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc---cHH
Confidence            5899999999865322   22345689999999999864   458889999999987 8999999997532221   111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHhhc
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-MSSVVVMLAS  136 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-~~evl~~L~~  136 (181)
                      ....... ... ...         +......+.+|+.+||+.||.+||+ +.+|+.|...
T Consensus       227 ~~~~~~~-~~~-~~~---------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f  275 (384)
T 4fr4_A          227 EIVHTFE-TTV-VTY---------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM  275 (384)
T ss_dssp             HHHHHHH-HCC-CCC---------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGG
T ss_pred             HHHHHHh-hcc-cCC---------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhh
Confidence            1111111 110 111         1112346889999999999999998 8888876543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.61  E-value=2e-16  Score=119.74  Aligned_cols=122  Identities=18%  Similarity=0.129  Sum_probs=62.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.....    ......|+..|+|||.+....++.++||||+|++ +++++|..|+..........   ..
T Consensus       169 ~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~  241 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GM  241 (336)
T ss_dssp             CEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred             eEEEeccccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hH
Confidence            4899999999864321    1223467899999999988888999999999987 89999999874322111000   00


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ....... ......+     ........+.+|+.+||+.||++|||+.|+++|..-
T Consensus       242 ~~~~~~~-~~~~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  291 (336)
T 3fhr_A          242 KRRIRLG-QYGFPNP-----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI  291 (336)
T ss_dssp             ----------CCCTT-----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred             HHhhhcc-ccccCch-----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence            0000000 0000000     011223468889999999999999999999998654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.61  E-value=7.5e-16  Score=115.63  Aligned_cols=129  Identities=22%  Similarity=0.170  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++....   ........|+..|+|||.+.+..++.++|||++|++ +++++|..|+....   ........
T Consensus       158 ~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~i  231 (326)
T 1blx_A          158 QIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS---DVDQLGKI  231 (326)
T ss_dssp             CEEECSCCSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHH
T ss_pred             CEEEecCcccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHH
Confidence            579999999875421   112234578899999999988889999999999987 89999998874321   11111111


Q ss_pred             HHHHhcCCcccccC------cc-------cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMD------PV-------LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ...........+..      ..       ............+.+|+.+||+.||++|||+.+++.|-.-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  300 (326)
T 1blx_A          232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  300 (326)
T ss_dssp             HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccc
Confidence            11111000000000      00       0001111223467889999999999999999999988554

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.61  E-value=3.4e-16  Score=119.30  Aligned_cols=122  Identities=24%  Similarity=0.351  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc------
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH------   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~------   74 (181)
                      ++||+|||+++....    .......|+..|+|||++.+..++.++||||+|++ +++++|..||.........      
T Consensus       170 ~~kl~Dfg~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  245 (360)
T 3eqc_A          170 EIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ  245 (360)
T ss_dssp             CEEECCCCCCHHHHH----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--
T ss_pred             CEEEEECCCCccccc----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccc
Confidence            579999999864321    11233578999999999998889999999999987 8999999887432110000      


Q ss_pred             ------------------------------chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCC
Q 041917           75 ------------------------------SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARR  124 (181)
Q Consensus        75 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R  124 (181)
                                                    ........... ...     +...   ......++.+|+.+||+.||++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~---~~~~~~~~~~li~~~L~~dP~~R  316 (360)
T 3eqc_A          246 VEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVN-EPP-----PKLP---SGVFSLEFQDFVNKCLIKNPAER  316 (360)
T ss_dssp             ----------------------------CCCHHHHHHHHHH-SCC-----CCCC---TTTSCHHHHHHHHHHHCSSTTTS
T ss_pred             ccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhc-cCC-----CCCC---cccccHHHHHHHHHHhhcChhhC
Confidence                                          00000000000 000     0000   01123368899999999999999


Q ss_pred             CCHHHHHHHhhc
Q 041917          125 PSMSSVVVMLAS  136 (181)
Q Consensus       125 pt~~evl~~L~~  136 (181)
                      ||+.|+++|..-
T Consensus       317 pt~~ell~hp~~  328 (360)
T 3eqc_A          317 ADLKQLMVHAFI  328 (360)
T ss_dssp             CCHHHHHTSHHH
T ss_pred             CCHHHHhhChHh
Confidence            999999998653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.60  E-value=1.6e-16  Score=119.57  Aligned_cols=130  Identities=17%  Similarity=0.126  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++......  .......|+..|+|||++.+ ..++.++||||+|++ +++++|..||....   .......
T Consensus       138 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~  212 (324)
T 3mtl_A          138 ELKLADFGLARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST---VEEQLHF  212 (324)
T ss_dssp             CEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CEEEccCcccccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            58999999997543211  11223467899999999876 557899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCCcccccCcccc-------------c----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLK-------------Q----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~-------------~----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .......... ........             .    ........++.+|+.+||+.||++|||+.||++|..-.
T Consensus       213 i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  286 (324)
T 3mtl_A          213 IFRILGTPTE-ETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL  286 (324)
T ss_dssp             HHHHHCCCCT-TTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred             HHHHhCCCCh-HhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhh
Confidence            1111111100 00000000             0    00011124578999999999999999999999986543

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.60  E-value=1.1e-16  Score=120.38  Aligned_cols=120  Identities=24%  Similarity=0.339  Sum_probs=61.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccc----ccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYA----MEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~----~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||+++......   ......|+..|+|||.+    .+..++.++||||+|++ +++++|..|+.......    
T Consensus       164 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----  236 (327)
T 3aln_A          164 NIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----  236 (327)
T ss_dssp             EEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------
T ss_pred             CEEEccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----
Confidence            57999999997653221   12233688999999998    45568889999999987 89999998874321100    


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                           ....  .......+.+...........+.+|+.+||+.||++||++.+|++|..
T Consensus       237 -----~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~  288 (327)
T 3aln_A          237 -----DQLT--QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF  288 (327)
T ss_dssp             --------C--CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred             -----HHHH--HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence                 0000  000000011111111122346889999999999999999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.60  E-value=3.9e-16  Score=119.51  Aligned_cols=126  Identities=21%  Similarity=0.141  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....     .....++..|+|||++.+ ..++.++||||+||+ +++++|+.||....   .......
T Consensus       166 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~l~~  237 (367)
T 1cm8_A          166 ELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD---HLDQLKE  237 (367)
T ss_dssp             CEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             CEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            5899999999864321     233578999999999876 668899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCC------------------cccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGE------------------ALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .........                  ........+. .........+.+|+.+||..||++|||+.|++.|..-
T Consensus       238 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f  311 (367)
T 1cm8_A          238 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF  311 (367)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHH
Confidence            111100000                  0000000000 1111223468899999999999999999999998654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.60  E-value=2e-16  Score=120.20  Aligned_cols=116  Identities=22%  Similarity=0.181  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .......+|++.|+|||++.+..++.++|+||+|++ +++++|..||...      ......
T Consensus       156 ~vkL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~  227 (345)
T 1xjd_A          156 HIKIADFGMCKENMLG--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELF  227 (345)
T ss_dssp             CEEECCCTTCBCCCCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEeEChhhhhcccC--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC------CHHHHH
Confidence            5899999999753221  122345689999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMS-SVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~-evl~~L~~  136 (181)
                      . ....... .     .    +.....++.+++.+||..||++||++. +|++|..-
T Consensus       228 ~-~i~~~~~-~-----~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f  273 (345)
T 1xjd_A          228 H-SIRMDNP-F-----Y----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF  273 (345)
T ss_dssp             H-HHHHCCC-C-----C----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred             H-HHHhCCC-C-----C----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccc
Confidence            1 1111111 1     1    111224688899999999999999998 88877543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.60  E-value=1.1e-15  Score=115.61  Aligned_cols=116  Identities=22%  Similarity=0.270  Sum_probs=80.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......  ......|+..|+|||++.+..++.++|||++|++ +++++|..|+...      ......
T Consensus       179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~  250 (335)
T 2owb_A          179 EVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------CLKETY  250 (335)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHH
T ss_pred             CEEEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC------CHHHHH
Confidence            589999999986532221  1233578999999999988888999999999987 8999999887421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ... ..... .+     ...    ....+.+|+.+||+.||++||++.||++|..-
T Consensus       251 ~~~-~~~~~-~~-----~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~  295 (335)
T 2owb_A          251 LRI-KKNEY-SI-----PKH----INPVAASLIQKMLQTDPTARPTINELLNDEFF  295 (335)
T ss_dssp             HHH-HHTCC-CC-----CTT----SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             HHH-hcCCC-CC-----Ccc----CCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            111 11110 11     111    12357889999999999999999999987553

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.60  E-value=1.3e-16  Score=121.16  Aligned_cols=132  Identities=20%  Similarity=0.102  Sum_probs=81.6

Q ss_pred             CceeeceecceeecCCCC--cccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~--~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++.......  ........|+..|+|||++.+ ..++.++||||+|++ +++++|..|+....   .....
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~  238 (351)
T 3mi9_A          162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT---EQHQL  238 (351)
T ss_dssp             CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHH
T ss_pred             CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC---hHHHH
Confidence            589999999986542211  122234578999999999876 457899999999987 89999998874321   11111


Q ss_pred             HHHHHHHhcCCcccccCcc------------cccCC-cHHH------HHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCEGEALELMDPV------------LKQSC-VGAE------LLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~------~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .......... ........            ..... ....      ...+.+|+.+||+.||++|||+.|+++|-.-.
T Consensus       239 ~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  316 (351)
T 3mi9_A          239 ALISQLCGSI-TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  316 (351)
T ss_dssp             HHHHHHHCCC-CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             HHHHHHhCCC-ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcC
Confidence            1111111110 00000000            00000 0011      23578999999999999999999999997764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.60  E-value=4.3e-17  Score=119.98  Aligned_cols=121  Identities=29%  Similarity=0.335  Sum_probs=81.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++....... ........++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       147 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~  219 (279)
T 1qpc_A          147 SCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM------TNPEV  219 (279)
T ss_dssp             CEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHH
T ss_pred             CEEECCCcccccccCcc-cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc------CHHHH
Confidence            58999999998653221 111223356778999999988888999999999987 89998 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .. .......     ...    +......+.+++.+||+.||++|||+.+|++.|++...
T Consensus       220 ~~-~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          220 IQ-NLERGYR-----MVR----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             HH-HHHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-HHhcccC-----CCC----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            11 1111110     001    11122468899999999999999999999999987643

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.60  E-value=3.3e-16  Score=122.32  Aligned_cols=64  Identities=25%  Similarity=0.428  Sum_probs=44.5

Q ss_pred             CceeeceecceeecCCCCc--------------------ccccccccCCCccCcccc-ccCccCcccceeehhHH-HHHH
Q 041917            2 NPKISDFGMARIFGGNQNE--------------------ANTNRVVGTYGYMAPEYA-MEGVFSIKSDVFSFGVL-LEIV   59 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~--------------------~~~~~~~g~~~~~aPe~~-~~~~~~~~~diws~gv~-~~~~   59 (181)
                      ++||+|||+++........                    ......+||..|+|||++ ....++.++||||+||+ ++++
T Consensus       167 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            5899999999875432111                    112456889999999986 45668899999999987 8999


Q ss_pred             hcCCCC
Q 041917           60 SGKRNS   65 (181)
Q Consensus        60 ~g~~~~   65 (181)
                      +|..|+
T Consensus       247 ~g~~p~  252 (432)
T 3n9x_A          247 NMLQSH  252 (432)
T ss_dssp             TTCTTT
T ss_pred             hccccc
Confidence            765443

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.60  E-value=2.8e-15  Score=111.50  Aligned_cols=118  Identities=18%  Similarity=0.095  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||++................|+..|+|||.+.+..  ++.++|||++|++ +++++|..|+...      ....
T Consensus       147 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~  220 (305)
T 2wtk_C          147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD------NIYK  220 (305)
T ss_dssp             CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS------SHHH
T ss_pred             cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc------hHHH
Confidence            57999999998654322222233456889999999987543  4678999999987 8999999887421      1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ... ....... ..     ..    .....+.+++.+||+.||.+|||+.|+++|..-
T Consensus       221 ~~~-~i~~~~~-~~-----~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~  267 (305)
T 2wtk_C          221 LFE-NIGKGSY-AI-----PG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF  267 (305)
T ss_dssp             HHH-HHHHCCC-CC-----CS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred             HHH-HHhcCCC-CC-----CC----ccCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence            111 1111111 11     11    122367889999999999999999999988553

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.60  E-value=7.9e-16  Score=117.32  Aligned_cols=116  Identities=21%  Similarity=0.186  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....  ........+|++.|+|||++.+..++.++|+||+|++ +++++|..||...      ......
T Consensus       159 ~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~  230 (353)
T 2i0e_A          159 HIKIADFGMCKENIW--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELF  230 (353)
T ss_dssp             CEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             cEEEEeCCccccccc--CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC------CHHHHH
Confidence            589999999975322  1122345689999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~~  136 (181)
                      .. ...... .+         +.....++.+|+.+||..||++||+     +.+|+.|..-
T Consensus       231 ~~-i~~~~~-~~---------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f  280 (353)
T 2i0e_A          231 QS-IMEHNV-AY---------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  280 (353)
T ss_dssp             HH-HHHCCC-CC---------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred             HH-HHhCCC-CC---------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence            11 111111 11         1112246889999999999999995     6899988643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.60  E-value=1.2e-15  Score=113.63  Aligned_cols=118  Identities=20%  Similarity=0.210  Sum_probs=80.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++....    .......|+..|+|||.+.+..++.++|||++|++ +++++|..|+....      .... 
T Consensus       147 ~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~-  215 (304)
T 2jam_A          147 KIMITDFGLSKMEQN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET------ESKL-  215 (304)
T ss_dssp             CEEBCSCSTTCCCCC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC------HHHH-
T ss_pred             CEEEccCCcceecCC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHH-
Confidence            579999999875321    11223468999999999998889999999999987 89999998874211      1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......... ....+ .    .......+.+++.+||+.||++||++.|++.|..-
T Consensus       216 ~~~i~~~~~-~~~~~-~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~  265 (304)
T 2jam_A          216 FEKIKEGYY-EFESP-F----WDDISESAKDFICHLLEKDPNERYTCEKALSHPWI  265 (304)
T ss_dssp             HHHHHHCCC-CCCTT-T----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHHcCCC-CCCcc-c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence            111111111 11111 1    11122468899999999999999999999988653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.60  E-value=6.2e-18  Score=127.36  Aligned_cols=128  Identities=21%  Similarity=0.256  Sum_probs=82.0

Q ss_pred             CceeeceecceeecCCCCccc-ccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCc-------CCC
Q 041917            2 NPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYL-------SKD   72 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~-~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~-------~~~   72 (181)
                      ++||+|||+++.......... .....++..|+|||.+.+..++.++||||+|++ +++++|..|+....       ...
T Consensus       183 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~  262 (326)
T 2w1i_A          183 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND  262 (326)
T ss_dssp             EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTT
T ss_pred             cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccc
Confidence            579999999987543322111 122346677999999988888999999999987 89999987753210       000


Q ss_pred             C--cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           73 G--HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        73 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .  ...............         ....+.....++.+++.+||+.||++||++.+|++.|+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          263 KQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             CCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHHHHhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            0  000000011111110         01111222346889999999999999999999999998753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.60  E-value=4.9e-16  Score=118.44  Aligned_cols=122  Identities=20%  Similarity=0.245  Sum_probs=80.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++...... .......+|+..|+|||++.+  ..++.++||||+|++ +++++|..|+......  .....
T Consensus       197 ~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~  273 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK--NSQAE  273 (355)
T ss_dssp             CEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC--CCHHH
T ss_pred             cEEEeeCCCCeecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc--chHHH
Confidence            58999999998643211 122234579999999999875  346788999999987 8999999987532221  11222


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~~  137 (181)
                      .........       +..    +......+.+|+.+||..||++||     ++.||++|+.-.
T Consensus       274 ~~~~~~~~~-------~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~  326 (355)
T 1vzo_A          274 ISRRILKSE-------PPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ  326 (355)
T ss_dssp             HHHHHHHCC-------CCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred             HHHHHhccC-------CCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence            211111111       001    111223578899999999999999     999999998654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.60  E-value=1.1e-15  Score=115.22  Aligned_cols=117  Identities=20%  Similarity=0.150  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .......+|+..|+|||.+.+..++.++|+||+|++ +++++|..||...      ......
T Consensus       159 ~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~  230 (327)
T 3a62_A          159 HVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE------NRKKTI  230 (327)
T ss_dssp             CEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHH
T ss_pred             cEEEEeCCcccccccC--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC------CHHHHH
Confidence            5899999998753221  112234578999999999988889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~~  137 (181)
                      ..... ... .+         +.....++.+++.+||+.||++||     ++.|+++|..-.
T Consensus       231 ~~i~~-~~~-~~---------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~  281 (327)
T 3a62_A          231 DKILK-CKL-NL---------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR  281 (327)
T ss_dssp             HHHHH-TCC-CC---------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGS
T ss_pred             HHHHh-CCC-CC---------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCccc
Confidence            11111 110 11         111123678899999999999999     889999986643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.59  E-value=4.1e-17  Score=119.20  Aligned_cols=120  Identities=29%  Similarity=0.300  Sum_probs=79.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++..... .........++..|+|||.+.+..++.++|+|++|++ +++++ |..|+...      .....
T Consensus       142 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~  214 (267)
T 3t9t_A          142 VIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEV  214 (267)
T ss_dssp             CEEECCTTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHH
T ss_pred             CEEEcccccccccccc-cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC------CHHHH
Confidence            5799999998754221 1111122356678999999988888999999999987 89998 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ... ......  ...       +......+.+++.+||+.||++||++.+++++|+++.
T Consensus       215 ~~~-i~~~~~--~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          215 VED-ISTGFR--LYK-------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             HHH-HHTTCC--CCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHH-HhcCCc--CCC-------CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            111 111110  000       1112246788999999999999999999999998753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.59  E-value=2e-15  Score=119.76  Aligned_cols=117  Identities=24%  Similarity=0.226  Sum_probs=79.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   .....+|++.|+|||++. ..++.++||||+||+ +++++|..||....      .....
T Consensus       177 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~  246 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT------DQEIL  246 (494)
T ss_dssp             CEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHH
T ss_pred             cEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            48999999998754322   223457999999999876 468899999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..... ... ....+..     ......+.+|+.+||+.||++|||+.|+++|..
T Consensus       247 ~~i~~-~~~-~~~~~~~-----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~  294 (494)
T 3lij_A          247 RKVEK-GKY-TFDSPEW-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW  294 (494)
T ss_dssp             HHHHH-TCC-CCCSGGG-----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             HHHHh-CCC-CCCchhc-----ccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence            11111 111 1111111     111235788999999999999999999998743

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.59  E-value=1.8e-15  Score=113.07  Aligned_cols=119  Identities=19%  Similarity=0.277  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......|+..|+|||.+.+..++.++|||++|++ +++++|..|+....      .....
T Consensus       163 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~  234 (314)
T 3com_A          163 HAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH------PMRAI  234 (314)
T ss_dssp             CEEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHH
T ss_pred             CEEEeecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------hHHHH
Confidence            579999999976533211  1233568889999999988889999999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .... .........       +......+.+++.+||+.||.+|||+.+|++|..-
T Consensus       235 ~~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~  282 (314)
T 3com_A          235 FMIP-TNPPPTFRK-------PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV  282 (314)
T ss_dssp             HHHH-HSCCCCCSS-------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred             HHHh-cCCCcccCC-------cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence            1111 111101100       11122468899999999999999999999987543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.59  E-value=9.6e-16  Score=125.75  Aligned_cols=115  Identities=21%  Similarity=0.198  Sum_probs=82.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .......+||+.|+|||++.+..|+.++|+||+|++ +++++|..||...      ......
T Consensus       480 ~ikL~DFGla~~~~~~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~------~~~~~~  551 (674)
T 3pfq_A          480 HIKIADFGMCKENIWD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELF  551 (674)
T ss_dssp             CEEECCCTTCEECCCT--TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             cEEEeecceeeccccC--CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC------CHHHHH
Confidence            6899999999864322  222345689999999999999999999999999987 8999999997431      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L~  135 (181)
                      .. ...... .+         +.....++.+|+.+||+.||++||++     .||++|..
T Consensus       552 ~~-i~~~~~-~~---------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~f  600 (674)
T 3pfq_A          552 QS-IMEHNV-AY---------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF  600 (674)
T ss_dssp             HH-HHSSCC-CC---------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGG
T ss_pred             HH-HHhCCC-CC---------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCcc
Confidence            11 111111 11         11223468899999999999999998     89998754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.59  E-value=8.1e-17  Score=119.88  Aligned_cols=117  Identities=22%  Similarity=0.366  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++.......  .......|+..|+|||.+.+..++.++|||++|++ +++++|..|+....      .....
T Consensus       157 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~  228 (303)
T 3a7i_A          157 EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVL  228 (303)
T ss_dssp             CEEECCCTTCEECBTTB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHH
T ss_pred             CEEEeecccceecCccc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC------HHHHH
Confidence            57999999997654321  12234578889999999988888999999999987 89999998864211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ......     +.+....    ...+.+++.+||+.||++|||+.+|++|..-
T Consensus       229 ~~-~~~~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~  274 (303)
T 3a7i_A          229 FL-IPKNNP-----PTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFI  274 (303)
T ss_dssp             HH-HHHSCC-----CCCCSSC----CHHHHHHHHHHCCSSGGGSCCHHHHTTCHHH
T ss_pred             HH-hhcCCC-----CCCcccc----CHHHHHHHHHHcCCChhhCcCHHHHhhChhh
Confidence            11 111111     1111111    2358889999999999999999999988654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.59  E-value=1.1e-15  Score=113.18  Aligned_cols=120  Identities=25%  Similarity=0.330  Sum_probs=78.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++.......  ......|+..|+|||.+.+..  ++.++|||++|++ +++++|..|+....   ..  ..
T Consensus       161 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~--~~  233 (295)
T 2clq_A          161 VLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG---EP--QA  233 (295)
T ss_dssp             CEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS---SH--HH
T ss_pred             CEEEeecccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCC---ch--hH
Confidence            579999999986532111  122356888999999987643  7789999999987 89999998874211   11  11


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .........     ..+.+.    .....++.+++.+||+.||++||++.+++.|-...
T Consensus       234 ~~~~~~~~~-----~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~  283 (295)
T 2clq_A          234 AMFKVGMFK-----VHPEIP----ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK  283 (295)
T ss_dssp             HHHHHHHHC-----CCCCCC----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred             HHHhhcccc-----cccccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence            111110000     011111    11224678899999999999999999999886554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.59  E-value=1e-15  Score=116.93  Aligned_cols=133  Identities=18%  Similarity=0.163  Sum_probs=81.3

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++......... ......|+..|+|||++.+ ..++.++||||+|++ +++++|..||....   ......
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~  242 (364)
T 3qyz_A          166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH---YLDQLN  242 (364)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS---GGGHHH
T ss_pred             CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC---hHHHHH
Confidence            58999999998653222111 1234578999999998754 448899999999987 89999998874321   111111


Q ss_pred             HHHHHHhcCCc---------------ccccCcccc--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEA---------------LELMDPVLK--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...........               .....+...  .........++.+|+.+||+.||++|||+.|+++|..-.
T Consensus       243 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  318 (364)
T 3qyz_A          243 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE  318 (364)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence            11111100000               000000000  000011234688999999999999999999999996643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.59  E-value=1.2e-15  Score=116.14  Aligned_cols=114  Identities=18%  Similarity=0.188  Sum_probs=81.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....     ....+|++.|+|||++.+..++.++|+||+|++ +++++|..||...      ..... 
T Consensus       179 ~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~-  246 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD------QPIQI-  246 (350)
T ss_dssp             CEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHH-
T ss_pred             CEEEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC------CHHHH-
Confidence            5899999999865321     234578999999999998889999999999987 8999999987421      11111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~~~  137 (181)
                      ......... .+         +......+.+++.+||+.||++||+     +.+|+.|..-.
T Consensus       247 ~~~i~~~~~-~~---------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~  298 (350)
T 1rdq_E          247 YEKIVSGKV-RF---------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA  298 (350)
T ss_dssp             HHHHHHCCC-CC---------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred             HHHHHcCCC-CC---------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcC
Confidence            111111111 11         1112246889999999999999998     99999986543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.59  E-value=1.7e-15  Score=112.29  Aligned_cols=117  Identities=22%  Similarity=0.254  Sum_probs=80.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......|+..|+|||.+.+..++.++|+|++|++ +++++|..|+....      .....
T Consensus       153 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~  224 (294)
T 2rku_A          153 EVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETY  224 (294)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHH
T ss_pred             CEEEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            589999999986532211  1233578899999999988888999999999987 89999998874211      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ..... ...     ..    .....+.+++.+||+.||++|||+.|+++|..-.
T Consensus       225 ~~-~~~~~-~~~-----~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          225 LR-IKKNE-YSI-----PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             HH-HHTTC-CCC-----CT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HH-Hhhcc-CCC-----cc----ccCHHHHHHHHHHcccChhhCcCHHHHhhChhee
Confidence            11 11111 011     11    1123578899999999999999999999986543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.58  E-value=3.1e-16  Score=115.30  Aligned_cols=117  Identities=25%  Similarity=0.291  Sum_probs=60.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++........  ......|+..|+|||.+.+..++.++|+|++|++ +++++|..|+.......   ..   
T Consensus       150 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---  221 (278)
T 3cok_A          150 NIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN---TL---  221 (278)
T ss_dssp             CEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------
T ss_pred             CEEEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH---HH---
Confidence            579999999986532211  1223468899999999988888899999999987 89999998874321110   00   


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          ......   +.    ..+.....++.+++.+||+.||++||++.+|++|..-.
T Consensus       222 ----~~~~~~---~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  267 (278)
T 3cok_A          222 ----NKVVLA---DY----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS  267 (278)
T ss_dssp             ------CCSS---CC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC
T ss_pred             ----HHHhhc---cc----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcccc
Confidence                000000   00    01111224678899999999999999999999886543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.58  E-value=2.5e-16  Score=118.76  Aligned_cols=129  Identities=21%  Similarity=0.215  Sum_probs=75.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......  .......|+..|+|||.+.+. .++.++|||++|++ +++++|..||.....   ......
T Consensus       162 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~  236 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD---IDQLYH  236 (331)
T ss_dssp             CEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHH
T ss_pred             cEEEEeCCCceeecCCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc---HHHHHH
Confidence            57999999997543221  112234688999999998765 67889999999987 899999988743211   111110


Q ss_pred             HHHH-----------HhcCCc-ccccCcccccCCc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKL-----------WCEGEA-LELMDPVLKQSCV-----GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~-----------~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ....           ...... .....+......+     ......+.+|+.+||+.||++|||+.||++|-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~  309 (331)
T 4aaa_A          237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF  309 (331)
T ss_dssp             HHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred             HHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence            0000           000000 0000011111101     112346889999999999999999999998753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.58  E-value=1.2e-15  Score=114.04  Aligned_cols=118  Identities=21%  Similarity=0.282  Sum_probs=70.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||++.......   ......|+..|+|||.+.     ...++.++|||++|++ +++++|..|+....     .
T Consensus       163 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~  234 (318)
T 2dyl_A          163 QIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----T  234 (318)
T ss_dssp             CEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----S
T ss_pred             CEEEEECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----c
Confidence            58999999987543221   122346889999999984     4557789999999987 89999998874211     1


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .......... .........       ......+.+++.+||+.||.+||++.+|++|..
T Consensus       235 ~~~~~~~~~~-~~~~~~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~  286 (318)
T 2dyl_A          235 DFEVLTKVLQ-EEPPLLPGH-------MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF  286 (318)
T ss_dssp             HHHHHHHHHH-SCCCCCCSS-------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred             cHHHHHHHhc-cCCCCCCcc-------CCCCHHHHHHHHHHccCChhHCcCHHHHhhCHH
Confidence            1111111111 111111100       011235788999999999999999999998753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.58  E-value=9.6e-16  Score=117.42  Aligned_cols=127  Identities=20%  Similarity=0.153  Sum_probs=77.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....     ......|+..|+|||.+.+ ..++.++||||+|++ +++++|..||....   .......
T Consensus       182 ~~kL~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~  253 (371)
T 4exu_A          182 ELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD---YLDQLTQ  253 (371)
T ss_dssp             CEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CEEEEecCccccccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHH
Confidence            589999999975422     1233578999999999877 678899999999987 89999999874321   1111111


Q ss_pred             HHHHHhcCCcccccC---------------cccccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMD---------------PVLKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~---------------~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ....... .......               ......   ........+.+|+.+||+.||++|||+.|+++|-.-.
T Consensus       254 i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  328 (371)
T 4exu_A          254 ILKVTGV-PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE  328 (371)
T ss_dssp             HHHHHCC-CCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHHHhCC-CcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccc
Confidence            1110000 0000000               000000   0011234688999999999999999999999996643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.58  E-value=6.3e-16  Score=122.27  Aligned_cols=117  Identities=22%  Similarity=0.185  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......|++.|+|||++.+ .++.++||||+||+ +++++|..||...      ......
T Consensus       167 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~  236 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA------NEYDIL  236 (484)
T ss_dssp             CEEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             cEEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC------CHHHHH
Confidence            58999999997653322   1234578999999999865 68899999999987 8999999997432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .... ..... ...+.     .......+.+|+.+||+.||++|||+.|+++|.+
T Consensus       237 ~~i~-~~~~~-~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~  284 (484)
T 3nyv_A          237 KKVE-KGKYT-FELPQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW  284 (484)
T ss_dssp             HHHH-HCCCC-CCSGG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred             HHHH-cCCCC-CCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence            1111 11111 10110     0112346889999999999999999999998854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.58  E-value=9.5e-17  Score=120.12  Aligned_cols=130  Identities=20%  Similarity=0.164  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCC-----cccccccccCCCccCcccccc-----CccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQN-----EANTNRVVGTYGYMAPEYAME-----GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-----~~~~~~~~g~~~~~aPe~~~~-----~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      .+||+|||+++.......     ........|+..|+|||.+..     ..++.++||||+|++ +++++|..||.....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            389999999875432111     111123468999999999865     457889999999987 899999999854322


Q ss_pred             CCCcc--------hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           71 KDGHS--------LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        71 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .....        .............. .......     ......+.+|+.+||+.||++|||+.|+++|..-.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          232 SDCGWDRGEACPACQNMLFESIQEGKY-EFPDKDW-----AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             SCSCC----CCHHHHHHHHHHHHHCCC-CCCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             ccccccccccchhHHHHHHHHHhccCc-ccCchhc-----ccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence            11100        00111111111111 1110000     01123688999999999999999999999986643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.58  E-value=1.3e-15  Score=112.33  Aligned_cols=113  Identities=18%  Similarity=0.133  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++......    ......|+..|+|||.+.+..++.++|+|++|++ +++++|..|+....      .....
T Consensus       152 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~  221 (284)
T 2vgo_A          152 ELKIADFGWSVHAPSL----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------HTETH  221 (284)
T ss_dssp             CEEECCCTTCEECSSS----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHH
T ss_pred             CEEEecccccccCccc----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC------HhHHH
Confidence            5799999998754321    1223578899999999998889999999999987 89999998874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...... .     .    +......+.+++.+||+.||.+||++.+|++|..
T Consensus       222 ~~-~~~~~~-~-----~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~  265 (284)
T 2vgo_A          222 RR-IVNVDL-K-----F----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW  265 (284)
T ss_dssp             HH-HHTTCC-C-----C----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred             HH-Hhcccc-C-----C----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence            11 111110 0     1    1111235788999999999999999999998754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.58  E-value=1.9e-15  Score=120.20  Aligned_cols=117  Identities=23%  Similarity=0.195  Sum_probs=79.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++......   ......|++.|+|||++. ..++.++||||+|++ +++++|..||...      ......
T Consensus       187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~  256 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ------NDQDII  256 (504)
T ss_dssp             SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            58999999998654322   223457999999999986 458899999999987 8999999987432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ... ......  +.....    .....++.+|+.+||..||.+|||+.|+++|.+
T Consensus       257 ~~i-~~~~~~--~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~  304 (504)
T 3q5i_A          257 KKV-EKGKYY--FDFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNSRW  304 (504)
T ss_dssp             HHH-HHCCCC--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             HHH-HcCCCC--CCcccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence            111 111110  000000    011246889999999999999999999998854

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.58  E-value=6.9e-17  Score=120.62  Aligned_cols=130  Identities=20%  Similarity=0.213  Sum_probs=75.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++........  ......|+..|+|||.+.+ ..++.++||||+|++ +++++|..|+.....   ......
T Consensus       140 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~  214 (311)
T 4agu_A          140 VIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD---VDQLYL  214 (311)
T ss_dssp             CEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHH
T ss_pred             CEEEeeCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            579999999986542222  1223478889999999876 567899999999987 899999988743211   111111


Q ss_pred             HHHHHh-----------cCCc---ccccCcccccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWC-----------EGEA---LELMDPVLKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~-----------~~~~---~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......           ....   ....++.....   ........+.+|+.+||+.||++|||+.||++|..-
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  288 (311)
T 4agu_A          215 IRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF  288 (311)
T ss_dssp             HHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHH
Confidence            111100           0000   00000000000   001123357889999999999999999999998654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.58  E-value=3.5e-16  Score=121.54  Aligned_cols=105  Identities=10%  Similarity=0.048  Sum_probs=73.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccc----------ccCccCcccceeehhHH-HHHHhcCCCCCCCcC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYA----------MEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLS   70 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~----------~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~   70 (181)
                      .+||+|||+++....     .....+| ..|+|||++          ....++.++||||+||+ +++++|+.||.....
T Consensus       249 ~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~  322 (413)
T 3dzo_A          249 GVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA  322 (413)
T ss_dssp             CEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred             eEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            589999999876421     1334567 899999998          55568889999999987 899999999743211


Q ss_pred             CCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 041917           71 KDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM  133 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~  133 (181)
                      ...               ....+...  ...    ...+.+|+.+||+.||++||++.++++|
T Consensus       323 ~~~---------------~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          323 LGG---------------SEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             GSC---------------SGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             hhh---------------HHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            110               00111100  011    2468899999999999999998877654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.58  E-value=2.5e-15  Score=114.99  Aligned_cols=118  Identities=19%  Similarity=0.260  Sum_probs=78.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc------CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~------~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~   74 (181)
                      .+||+|||++.......   ......|+..|+|||++.+      ..++.++||||+|++ +++++|..||...      
T Consensus       238 ~ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~------  308 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR------  308 (365)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS------
T ss_pred             CEEEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC------
Confidence            58999999988654322   2234578999999998863      357889999999987 8999999987421      


Q ss_pred             chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           75 SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........ ...... ....+.. .    .....+.+++.+||+.||++|||+.++++|..
T Consensus       309 ~~~~~~~~-i~~~~~-~~~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~  362 (365)
T 2y7j_A          309 RQILMLRM-IMEGQY-QFSSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQHPF  362 (365)
T ss_dssp             SHHHHHHH-HHHTCC-CCCHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CHHHHHHH-HHhCCC-CCCCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence            11111111 111111 0110100 0    11235788999999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.58  E-value=1.6e-15  Score=111.40  Aligned_cols=117  Identities=18%  Similarity=0.110  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++.......   ......|+..|+|||.+.+. ++.++|||++|++ +++++|..|+....      .....
T Consensus       147 ~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~  216 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT------DSEVM  216 (277)
T ss_dssp             CEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHH
T ss_pred             cEEEEecccceeccCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC------HHHHH
Confidence            57999999998654322   22335789999999988654 8899999999987 89999999874321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...... .......     ......+.+++.+||+.||++|||+.++++|..
T Consensus       217 ~~-~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~  264 (277)
T 3f3z_A          217 LK-IREGTF-TFPEKDW-----LNVSPQAESLIRRLLTKSPKQRITSLQALEHEW  264 (277)
T ss_dssp             HH-HHHCCC-CCCHHHH-----TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred             HH-HHhCCC-CCCchhh-----hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence            11 111111 1111000     011246888999999999999999999998743

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.58  E-value=2.9e-16  Score=120.25  Aligned_cols=127  Identities=19%  Similarity=0.173  Sum_probs=72.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+ ..++.++||||+||+ +++++|+.||....   .......
T Consensus       170 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~l~~  241 (367)
T 2fst_X          170 ELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQLKL  241 (367)
T ss_dssp             CEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            5899999999764221     233578999999999876 668899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcCCcccccCc--------------cccc-C---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDP--------------VLKQ-S---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~--------------~~~~-~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......... ...+..              .... .   ........+.+|+.+||..||++|||+.|++.|..-.
T Consensus       242 i~~~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~  316 (367)
T 2fst_X          242 ILRLVGTPG-AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA  316 (367)
T ss_dssp             HHHHHCSCC-HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHhCCCC-HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhh
Confidence            111111000 000000              0000 0   0001134678999999999999999999999996543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.58  E-value=6e-16  Score=124.43  Aligned_cols=120  Identities=25%  Similarity=0.217  Sum_probs=83.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   .....+|++.|+|||++.+..++.++|+||+||+ +++++|..||.......  ... ..
T Consensus       324 ~vKL~DFGla~~~~~~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~-~i  397 (576)
T 2acx_A          324 HIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KRE-EV  397 (576)
T ss_dssp             CEEECCCTTCEECCTTC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHH-HH
T ss_pred             CeEEEecccceecccCc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHH-HH
Confidence            68999999998653222   2234589999999999998889999999999987 89999999985432211  111 11


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~~~  137 (181)
                      ........ ..+         +.....++.+|+.+||..||++||     ++.||++|-.-.
T Consensus       398 ~~~i~~~~-~~~---------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~  449 (576)
T 2acx_A          398 ERLVKEVP-EEY---------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK  449 (576)
T ss_dssp             HHHHHHCC-CCC---------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGT
T ss_pred             HHHhhccc-ccC---------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhc
Confidence            11111111 011         111224688999999999999999     789999986543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.58  E-value=1.1e-16  Score=130.93  Aligned_cols=119  Identities=24%  Similarity=0.265  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....... .......++..|+|||.+.+..++.++||||+|++ +++++ |..|+...      .....
T Consensus       529 ~vkL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~------~~~~~  601 (656)
T 2j0j_A          529 CVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV------KNNDV  601 (656)
T ss_dssp             EEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHH
T ss_pred             CEEEEecCCCeecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC------CHHHH
Confidence            579999999986532211 11223356778999999988889999999999987 88886 77776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ... ........         .+......+.+++.+||+.||++||++.+|++.|+++
T Consensus       602 ~~~-i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          602 IGR-IENGERLP---------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             HHH-HHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHH-HHcCCCCC---------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            111 11111111         1112234688999999999999999999999999865

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.57  E-value=6.9e-16  Score=118.82  Aligned_cols=132  Identities=17%  Similarity=0.161  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCC-----CcccccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCCCCCCcCCCC
Q 041917            2 NPKISDFGMARIFGGNQ-----NEANTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-----~~~~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~   73 (181)
                      .+||+|||.+.......     .........|+..|+|||++.+  ..++.++||||+||+ +++++|..||....... 
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-  244 (389)
T 3gni_B          166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-  244 (389)
T ss_dssp             CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT-
T ss_pred             CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-
Confidence            57999999876432111     1111123468888999999987  568899999999987 89999999974321111 


Q ss_pred             cchHHHHHHHHh---------cC-------------CcccccC-----c----ccccCCcHHHHHHHHHHHHhhccCCCC
Q 041917           74 HSLLTYTWKLWC---------EG-------------EALELMD-----P----VLKQSCVGAELLKYIHIGLLCVQEDPA  122 (181)
Q Consensus        74 ~~~~~~~~~~~~---------~~-------------~~~~~~~-----~----~~~~~~~~~~~~~~~~l~~~cl~~dp~  122 (181)
                       ...........         ..             .....+.     +    .............+.+|+.+||+.||+
T Consensus       245 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  323 (389)
T 3gni_B          245 -MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPD  323 (389)
T ss_dssp             -HHHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTT
T ss_pred             -HHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcc
Confidence             11000000000         00             0000000     0    000011122234688999999999999


Q ss_pred             CCCCHHHHHHHhh
Q 041917          123 RRPSMSSVVVMLA  135 (181)
Q Consensus       123 ~Rpt~~evl~~L~  135 (181)
                      +|||+.|+++|..
T Consensus       324 ~Rpta~ell~hp~  336 (389)
T 3gni_B          324 ARPSASTLLNHSF  336 (389)
T ss_dssp             TSCCHHHHTTSGG
T ss_pred             cCCCHHHHhcCHH
Confidence            9999999999844

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.57  E-value=1.1e-15  Score=112.53  Aligned_cols=117  Identities=18%  Similarity=0.184  Sum_probs=76.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||++.......   ......|+..|+|||.+.+..++.++|+|++|++ +++++|..|+....      .... 
T Consensus       150 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~-  219 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------KQET-  219 (283)
T ss_dssp             CEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHH-
T ss_pred             ceEEEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------hHHH-
Confidence            58999999998653221   1223468889999999988889999999999987 89999998874321      1111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ......... . .....    .......+.+++.+||+.||++||++.+++.|.
T Consensus       220 ~~~~~~~~~-~-~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  267 (283)
T 3bhy_A          220 LTNISAVNY-D-FDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS  267 (283)
T ss_dssp             HHHHHTTCC-C-CCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCH
T ss_pred             HHHhHhccc-C-Ccchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCH
Confidence            111111110 0 01000    011123578899999999999999999999874

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.57  E-value=2.1e-15  Score=115.76  Aligned_cols=115  Identities=17%  Similarity=0.186  Sum_probs=79.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .......+|++.|+|||++.+..++.++|+||+||+ +++++|..||...      ......
T Consensus       177 ~ikL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~  248 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEH--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------NTAEMY  248 (373)
T ss_dssp             CEEECCCCBCGGGBCC--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS------BHHHHH
T ss_pred             CEEEeeCccccccccC--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHH
Confidence            5899999999753221  122345689999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH----HHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM----SSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~----~evl~~L~  135 (181)
                      .... .... .+ .+        .....+.+|+.+||+.||++||++    .+++.|..
T Consensus       249 ~~i~-~~~~-~~-~~--------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~  296 (373)
T 2r5t_A          249 DNIL-NKPL-QL-KP--------NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF  296 (373)
T ss_dssp             HHHH-HSCC-CC-CS--------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred             HHHH-hccc-CC-CC--------CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence            1111 1111 11 11        112357889999999999999997    46776644

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.57  E-value=1.4e-15  Score=121.70  Aligned_cols=120  Identities=22%  Similarity=0.253  Sum_probs=81.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.......  .....+||+.|+|||++.+..++.++|+||+||+ +++++|..||......  .......
T Consensus       327 ~vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--~~~~~~~  402 (543)
T 3c4z_A          327 NVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELK  402 (543)
T ss_dssp             CEEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--CCHHHHH
T ss_pred             CEEEeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--hhHHHHH
Confidence            689999999986543221  1234589999999999999889999999999987 8999999998532211  1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM-----SSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~-----~evl~~L~~  136 (181)
                      .... .... ..         +......+.+|+.+||+.||++||++     .+|+.|-.-
T Consensus       403 ~~i~-~~~~-~~---------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff  452 (543)
T 3c4z_A          403 QRVL-EQAV-TY---------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF  452 (543)
T ss_dssp             HHHH-HCCC-CC---------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGG
T ss_pred             HHHh-hccc-CC---------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccc
Confidence            1111 1111 11         11122467889999999999999964     789887543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.57  E-value=4e-16  Score=117.17  Aligned_cols=119  Identities=23%  Similarity=0.263  Sum_probs=78.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc---cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~---~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+++.....   .......|+..|+|||++.   ...++.++||||+|++ +++++|..|+.....  ...+.
T Consensus       155 ~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~  229 (322)
T 2ycf_A          155 LIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSLK  229 (322)
T ss_dssp             CEEECCCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC--SSCHH
T ss_pred             eEEEccCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch--HHHHH
Confidence            4899999999865321   1123357899999999874   4567889999999987 899999998743221  11221


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ...    ..... ... +....    .....+.+++.+||+.||++||++.++++|..
T Consensus       230 ~~~----~~~~~-~~~-~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~  277 (322)
T 2ycf_A          230 DQI----TSGKY-NFI-PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPW  277 (322)
T ss_dssp             HHH----HHTCC-CCC-HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHH----HhCcc-ccC-chhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcC
Confidence            111    11111 000 10001    11246889999999999999999999998754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.56  E-value=1.7e-16  Score=116.89  Aligned_cols=110  Identities=19%  Similarity=0.235  Sum_probs=74.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++......      ....|+..|+|||.+.+. .++.++||||+|++ +++++|..++...      ..   
T Consensus       172 ~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~~---  236 (289)
T 1x8b_A          172 MFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------DQ---  236 (289)
T ss_dssp             CEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------HH---
T ss_pred             EEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------hH---
Confidence            5799999998864321      123588899999998765 45678999999987 7888776554211      11   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                       ............     ...    ....+.+++.+||+.||++|||+.|+++|..-
T Consensus       237 -~~~~~~~~~~~~-----~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  283 (289)
T 1x8b_A          237 -WHEIRQGRLPRI-----PQV----LSQEFTELLKVMIHPDPERRPSAMALVKHSVL  283 (289)
T ss_dssp             -HHHHHTTCCCCC-----SSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC
T ss_pred             -HHHHHcCCCCCC-----Ccc----cCHHHHHHHHHHhCCCcccCCCHHHHhhChHh
Confidence             111111111111     111    12368889999999999999999999998654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.56  E-value=8.6e-16  Score=119.33  Aligned_cols=121  Identities=16%  Similarity=0.154  Sum_probs=78.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-------cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCC
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-------EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDG   73 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-------~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~   73 (181)
                      ++||+|||+++....... ......+||+.|+|||++.       ...++.++|+||+||+ +++++|..||...   ..
T Consensus       200 ~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~---~~  275 (412)
T 2vd5_A          200 HIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD---ST  275 (412)
T ss_dssp             CEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS---SH
T ss_pred             CEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC---CH
Confidence            689999999986543222 1223458999999999987       3568899999999987 8999999997432   11


Q ss_pred             cchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCC---CCHHHHHHHhhc
Q 041917           74 HSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARR---PSMSSVVVMLAS  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R---pt~~evl~~L~~  136 (181)
                      ......+.......   ..  +...    .....++.+|+.+||. +|++|   |++.||+.|-.-
T Consensus       276 ~~~~~~i~~~~~~~---~~--p~~~----~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff  331 (412)
T 2vd5_A          276 AETYGKIVHYKEHL---SL--PLVD----EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF  331 (412)
T ss_dssp             HHHHHHHHTHHHHC---CC--C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred             HHHHHHHHhcccCc---CC--Cccc----cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence            11111111000000   00  1000    1112368889999999 99998   599999999653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.56  E-value=1.2e-15  Score=119.44  Aligned_cols=122  Identities=17%  Similarity=0.171  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||+++....... ......+||+.|+|||++.     ...++.++|+||+||+ +++++|..||...      .
T Consensus       213 ~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~------~  285 (437)
T 4aw2_A          213 HIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------S  285 (437)
T ss_dssp             CEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS------S
T ss_pred             CEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC------C
Confidence            689999999986543222 2223468999999999987     4568899999999987 8999999997431      1


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPAR--RPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~evl~~L~~  136 (181)
                      ................+...  .    .....++.+|+.+||..+|++  |+++.||++|..-
T Consensus       286 ~~~~~~~i~~~~~~~~~p~~--~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff  342 (437)
T 4aw2_A          286 LVETYGKIMNHKERFQFPTQ--V----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFF  342 (437)
T ss_dssp             HHHHHHHHHTHHHHCCCCSS--C----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGG
T ss_pred             hhHHHHhhhhccccccCCcc--c----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCcc
Confidence            11111111110000011110  0    011236788999999888888  9999999999654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.56  E-value=3.9e-16  Score=115.91  Aligned_cols=128  Identities=23%  Similarity=0.384  Sum_probs=75.8

Q ss_pred             CceeeceecceeecCCCC---cccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQN---EANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~---~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||++........   ........|+..|+|||.+.+ ..++.++|||++|++ +++++|..|+.....   ...
T Consensus       159 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~  235 (303)
T 2vwi_A          159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP---MKV  235 (303)
T ss_dssp             CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG---GGH
T ss_pred             CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch---hhH
Confidence            579999999875432211   111223578899999999865 457889999999987 899999998743211   111


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ..   ... .......................+.+++.+||+.||.+||++.+|++|..-
T Consensus       236 ~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  291 (303)
T 2vwi_A          236 LM---LTL-QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF  291 (303)
T ss_dssp             HH---HHH-TSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC
T ss_pred             HH---HHh-ccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence            11   111 111111100000001111122367889999999999999999999988543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.56  E-value=8.3e-16  Score=115.50  Aligned_cols=109  Identities=19%  Similarity=0.307  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.....    ......|+..|+|||.+.+..+ +.++|||++|++ +++++|..|+....          
T Consensus       188 ~~kL~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------  253 (320)
T 3a99_A          188 ELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------  253 (320)
T ss_dssp             EEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------
T ss_pred             CEEEeeCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------
Confidence            5799999999865321    1223568899999999877665 577999999987 89999998874210          


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        .... ...  ....    ..    ..++.+++.+||+.||++|||+.+|++|..-.
T Consensus       254 --~~~~-~~~--~~~~----~~----~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~  298 (320)
T 3a99_A          254 --EIIR-GQV--FFRQ----RV----SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ  298 (320)
T ss_dssp             --HHHH-CCC--CCSS----CC----CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             --hhhc-ccc--cccc----cC----CHHHHHHHHHHccCChhhCcCHHHHhcCHhhc
Confidence              0011 100  1111    11    23678899999999999999999999986543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.56  E-value=4.2e-15  Score=108.58  Aligned_cols=115  Identities=23%  Similarity=0.289  Sum_probs=76.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCc---ccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSI---KSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~---~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||++....       .....|+..|+|||.+.+..+..   ++||||+|++ +++++|..|+...      ...
T Consensus       151 ~~~l~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~------~~~  217 (271)
T 3kmu_A          151 TARISMADVKFSFQ-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL------SNM  217 (271)
T ss_dssp             CEEEEGGGSCCTTS-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS------CHH
T ss_pred             ceeEEeccceeeec-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc------ChH
Confidence            45777777654211       12246788999999998765544   7999999987 8999999987421      111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ............     +..    +......+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       218 ~~~~~~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          218 EIGMKVALEGLR-----PTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             HHHHHHHHSCCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCC-----CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            111111111111     111    1122346889999999999999999999999998764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.56  E-value=3.8e-15  Score=113.77  Aligned_cols=115  Identities=10%  Similarity=0.002  Sum_probs=79.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++..............+||..|+|||++.+..++.++||||+||+ +++++|+.|+......         
T Consensus       221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---------  291 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG---------  291 (365)
T ss_dssp             TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---------
T ss_pred             CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---------
Confidence            589999999976542223333445689999999999999889999999999987 8999999887322110         


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCC-CCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARR-PSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R-pt~~evl~~L~~~  137 (181)
                               ...+...+.....   ...+.+++..|++.+|.+| |++.++.+.|+..
T Consensus       292 ---------~~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          292 ---------ECKPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             ---------EEEECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             ---------ceeechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence                     0011111111111   2345678889999999999 4677777666654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.56  E-value=1.6e-15  Score=115.10  Aligned_cols=132  Identities=20%  Similarity=0.163  Sum_probs=78.8

Q ss_pred             CceeeceecceeecCCCCcc--------cccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCC
Q 041917            2 NPKISDFGMARIFGGNQNEA--------NTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK   71 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~--------~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~   71 (181)
                      .+||+|||+++.........        ......|+..|+|||++.. ..++.++||||+|++ +++++|..||..... 
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-  228 (353)
T 2b9h_A          150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-  228 (353)
T ss_dssp             CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-
T ss_pred             cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-
Confidence            58999999998653221110        1123478899999998764 668889999999987 899999988743211 


Q ss_pred             CCcchHHHHHHHHhcCCcc-------------------cccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           72 DGHSLLTYTWKLWCEGEAL-------------------ELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                        .................                   ......+. ........++.+++.+||+.||++|||+.||++
T Consensus       229 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          229 --RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE-KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             --HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHH-HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchh-hhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence              11111111111000000                   00000000 000112346789999999999999999999999


Q ss_pred             HhhcC
Q 041917          133 MLASD  137 (181)
Q Consensus       133 ~L~~~  137 (181)
                      |..-.
T Consensus       306 hp~~~  310 (353)
T 2b9h_A          306 HPYLQ  310 (353)
T ss_dssp             SGGGT
T ss_pred             Ccccc
Confidence            86554

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.56  E-value=4.8e-16  Score=118.47  Aligned_cols=130  Identities=19%  Similarity=0.134  Sum_probs=73.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......   ......|+..|+|||.+.+ ..++.++||||+|++ +++++|..|+....   .......
T Consensus       172 ~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~  245 (362)
T 3pg1_A          172 DITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST---FYNQLNK  245 (362)
T ss_dssp             CEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            57999999997543221   1223468889999999876 668899999999987 89999999874321   1111111


Q ss_pred             HHHHHhcCCc-----------ccccCcccc-------cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEA-----------LELMDPVLK-------QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~-----------~~~~~~~~~-------~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ..........           ...+.....       ..........+.+|+.+||+.||++|||+.|+++|..-.
T Consensus       246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  321 (362)
T 3pg1_A          246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE  321 (362)
T ss_dssp             HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhh
Confidence            1111000000           000000000       000111234588999999999999999999999986543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.56  E-value=1.7e-15  Score=117.61  Aligned_cols=122  Identities=20%  Similarity=0.223  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc----cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV----FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~----~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      ++||+|||+++...... .......+|++.|+|||++.+..    ++.++|+||+||+ +++++|..||...      ..
T Consensus       206 ~ikL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~  278 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SL  278 (410)
T ss_dssp             CEEECCCTTCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS------SH
T ss_pred             CEEEeccceeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC------Ch
Confidence            68999999998653221 12233568999999999987654    7889999999987 8999999997421      11


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhhcC
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPAR--RPSMSSVVVMLASD  137 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~evl~~L~~~  137 (181)
                      ...................       .....++.+|+.+||..+|++  |+++.||++|..-.
T Consensus       279 ~~~~~~i~~~~~~~~~p~~-------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~  334 (410)
T 3v8s_A          279 VGTYSKIMNHKNSLTFPDD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK  334 (410)
T ss_dssp             HHHHHHHHTHHHHCCCCTT-------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred             hhHHHHHHhccccccCCCc-------ccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence            1111111111000111110       011236788999999999988  99999999997543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.55  E-value=2.8e-15  Score=112.55  Aligned_cols=118  Identities=20%  Similarity=0.304  Sum_probs=72.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||++.......  .......|+..|+|||.+.     ...++.++|||++|++ +++++|..|+....      
T Consensus       167 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------  238 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------  238 (326)
T ss_dssp             CEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC------
T ss_pred             CEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc------
Confidence            58999999987543211  1123357889999999986     4567889999999987 89999998873211      


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......... .........    ..    ....+.+++.+||..||.+||++.+|++|..-
T Consensus       239 ~~~~~~~~~-~~~~~~~~~----~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~  290 (326)
T 2x7f_A          239 PMRALFLIP-RNPAPRLKS----KK----WSKKFQSFIESCLVKNHSQRPATEQLMKHPFI  290 (326)
T ss_dssp             HHHHHHHHH-HSCCCCCSC----SC----SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHH
T ss_pred             HHHHHHHhh-cCccccCCc----cc----cCHHHHHHHHHHhccChhhCCCHHHHhhChHH
Confidence            111111111 111111111    11    12368889999999999999999999997543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.55  E-value=3.5e-15  Score=109.45  Aligned_cols=114  Identities=19%  Similarity=0.256  Sum_probs=70.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||++.......   ......|+..|+|||.+.+..+ +.++|+|++|++ +++++|..|+...      .....
T Consensus       149 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~  219 (276)
T 2h6d_A          149 NAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE------HVPTL  219 (276)
T ss_dssp             CEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHH
T ss_pred             CEEEeecccccccCCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC------cHHHH
Confidence            57999999987643221   1223468889999999987665 578999999987 8999999887321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...... ...     ..    .....+.+++.+||+.||.+|||+.+|++|..
T Consensus       220 ~~-~~~~~~-~~~-----~~----~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~  264 (276)
T 2h6d_A          220 FK-KIRGGV-FYI-----PE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEW  264 (276)
T ss_dssp             HH-HHHHCC-CCC-----CT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred             HH-HhhcCc-ccC-----ch----hcCHHHHHHHHHHccCChhhCCCHHHHHhChh
Confidence            11 111111 011     11    11235788999999999999999999999854

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.54  E-value=4.5e-15  Score=110.87  Aligned_cols=109  Identities=21%  Similarity=0.339  Sum_probs=77.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccC-cccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFS-IKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~-~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.....    ......|+..|+|||.+.+..+. .++|||++|++ +++++|..|+...        .. 
T Consensus       178 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~-  244 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD--------QE-  244 (312)
T ss_dssp             EEEECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--------HH-
T ss_pred             eEEEEEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh--------HH-
Confidence            4799999999865322    12335688999999998776654 58999999987 8999999887421        00 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                         .. ... ...         +......+.+++.+||+.||++||++.||++|..-.
T Consensus       245 ---~~-~~~-~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~  288 (312)
T 2iwi_A          245 ---IL-EAE-LHF---------PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ  288 (312)
T ss_dssp             ---HH-HTC-CCC---------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred             ---Hh-hhc-cCC---------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence               00 110 011         111123578899999999999999999999986644

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.54  E-value=4.2e-15  Score=109.81  Aligned_cols=117  Identities=21%  Similarity=0.173  Sum_probs=76.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++........   .....|+..|+|||.+.+. ++.++|||++|++ +++++|..|+...      ......
T Consensus       162 ~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~  231 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK------NEYDIL  231 (287)
T ss_dssp             CEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             cEEEeccCcceeecCCCc---cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            589999999875432221   1233578899999988654 7889999999987 8999999887432      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ....... ...+..     .....++.+++.+||+.||++|||+.|+++|..
T Consensus       232 ~~-~~~~~~~-~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~  279 (287)
T 2wei_A          232 KR-VETGKYA-FDLPQW-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW  279 (287)
T ss_dssp             HH-HHHCCCC-CCSGGG-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred             HH-HHcCCCC-CCchhh-----hhcCHHHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence            11 1111111 000100     111236888999999999999999999998743

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.53  E-value=1.6e-15  Score=112.67  Aligned_cols=119  Identities=18%  Similarity=0.278  Sum_probs=75.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||++.....  .........|+..|+|||.+.     ...++.++|||++|++ +++++|..|+....      
T Consensus       155 ~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------  226 (302)
T 2j7t_A          155 DIRLADFGVSAKNLK--TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------  226 (302)
T ss_dssp             CEEECCCHHHHHHHH--HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------
T ss_pred             CEEEEECCCCccccc--cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------
Confidence            579999998753211  011122346888999999883     5567889999999987 89999998874221      


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .......... ........       +......+.+++.+||+.||++|||+.+|++|..-
T Consensus       227 ~~~~~~~~~~-~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~  279 (302)
T 2j7t_A          227 PMRVLLKIAK-SDPPTLLT-------PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV  279 (302)
T ss_dssp             HHHHHHHHHH-SCCCCCSS-------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTT
T ss_pred             HHHHHHHHhc-cCCcccCC-------ccccCHHHHHHHHHHcccChhhCCCHHHHhcChHH
Confidence            1111111111 11111111       11122468889999999999999999999988554

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.53  E-value=4.2e-15  Score=112.97  Aligned_cols=127  Identities=19%  Similarity=0.108  Sum_probs=77.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....     .....|+..|+|||.+.+ ..++.++||||+|++ +++++|..||....   .......
T Consensus       164 ~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---~~~~~~~  235 (353)
T 3coi_A          164 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD---YLDQLTQ  235 (353)
T ss_dssp             CEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC---HHHHHHH
T ss_pred             cEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            5899999998754211     223478899999999876 668899999999987 89999998874321   1111111


Q ss_pred             HHHHHhcC------------------CcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEG------------------EALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ........                  .......+... .........+.+++.+||+.||++|||+.+++.|-.-.
T Consensus       236 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  310 (353)
T 3coi_A          236 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE  310 (353)
T ss_dssp             HHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence            11100000                  00000000000 11112245688999999999999999999999986643

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.52  E-value=8.6e-15  Score=110.84  Aligned_cols=125  Identities=19%  Similarity=0.218  Sum_probs=80.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCc-ccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSI-KSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~-~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||++......    ......|+..|+|||.+.+. .+.. ++|||++|++ +++++|..|+.....  ....  
T Consensus       190 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~--  261 (348)
T 2pml_X          190 RVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS--LVEL--  261 (348)
T ss_dssp             CEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC--SHHH--
T ss_pred             cEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHH--
Confidence            5799999999865322    22345788999999999876 5665 8999999987 899999998743211  0111  


Q ss_pred             HHHHHHhcCCcccccC-------cccc---cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMD-------PVLK---QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                        ......... ....       +...   ..........+.+|+.+||+.||.+||++.|+++|..-.
T Consensus       262 --~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~  327 (348)
T 2pml_X          262 --FNNIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA  327 (348)
T ss_dssp             --HHHHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGT
T ss_pred             --HHHHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence              111111111 1110       0000   000012234688999999999999999999999986543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.51  E-value=1.1e-14  Score=107.99  Aligned_cols=120  Identities=18%  Similarity=0.219  Sum_probs=79.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc------cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM------EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~------~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~   74 (181)
                      .+||+|||++.......   ......|+..|+|||.+.      ...++.++|||++|++ +++++|..|+...      
T Consensus       162 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------  232 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR------  232 (298)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------
T ss_pred             cEEEecccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc------
Confidence            57999999998653222   123356888999999875      3457789999999987 8999999887421      


Q ss_pred             chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           75 SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .......... .... ....+.     .......+.+++.+||+.||++|||+.|+++|-.-.
T Consensus       233 ~~~~~~~~~~-~~~~-~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (298)
T 1phk_A          233 KQMLMLRMIM-SGNY-QFGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ  288 (298)
T ss_dssp             SHHHHHHHHH-HTCC-CCCTTT-----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cHHHHHHHHh-cCCc-ccCccc-----ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhh
Confidence            1111111111 1111 111110     111234688999999999999999999999886543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.51  E-value=4e-15  Score=111.19  Aligned_cols=132  Identities=14%  Similarity=0.110  Sum_probs=77.7

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++....... ........++..|+|||.+.. ..++.++||||+|++ +++++|..|+.....   .....
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~~  235 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE---LEQMQ  235 (320)
T ss_dssp             EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH
T ss_pred             eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH---HHHHH
Confidence            579999999986532211 111223467889999998765 668889999999987 899999988743211   11111


Q ss_pred             HHHHHHhc----------CCcccccCcccc-c-----CCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCE----------GEALELMDPVLK-Q-----SCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~----------~~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ........          ......+..... .     ........++.+++.+||+.||++|||+.|+++|..-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (320)
T 2i6l_A          236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM  309 (320)
T ss_dssp             HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred             HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence            10000000          000000000000 0     0001123468899999999999999999999998554

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.51  E-value=2.3e-15  Score=111.54  Aligned_cols=120  Identities=21%  Similarity=0.237  Sum_probs=70.5

Q ss_pred             CceeeceecceeecCCCC------------cccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCC
Q 041917            2 NPKISDFGMARIFGGNQN------------EANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGF   67 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~------------~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~   67 (181)
                      .+||+|||+++.......            ........|+..|+|||.+.+. .++.++|||++|++ +++++   |+..
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            579999999875432110            1112345688999999998764 58889999999987 88886   3211


Q ss_pred             CcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           68 YLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .     ...... ........      ..............+.+++.+||+.||.+|||+.+|++|..-
T Consensus       231 ~-----~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  287 (303)
T 1zy4_A          231 G-----MERVNI-LKKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL  287 (303)
T ss_dssp             H-----HHHHHH-HHHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCS
T ss_pred             c-----hhHHHH-HHhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCc
Confidence            0     000111 11111110      011111222233457889999999999999999999998654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.46  E-value=6e-15  Score=120.22  Aligned_cols=127  Identities=19%  Similarity=0.150  Sum_probs=74.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCC--CcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKD--GHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~--~~~~~~   78 (181)
                      .+||+|||+++......   ......|+..|+|||.+.+..++.++||||+|++ +++++|..||.......  ......
T Consensus       162 ~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~  238 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE  238 (676)
T ss_dssp             EEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-
T ss_pred             eEEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc
Confidence            37999999998653221   2234578999999999998889999999999987 89999999874311000  000000


Q ss_pred             HHHHHH-hcCCcccc--cCcc--cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 041917           79 YTWKLW-CEGEALEL--MDPV--LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVV  131 (181)
Q Consensus        79 ~~~~~~-~~~~~~~~--~~~~--~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl  131 (181)
                      ...... ........  ....  ............+.+++.+||.+||++|||+.+++
T Consensus       239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            000000 00000000  0000  01122334456789999999999999999998754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.34  E-value=2.7e-13  Score=111.47  Aligned_cols=105  Identities=18%  Similarity=0.238  Sum_probs=70.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....      ....|++.|++||++.+.. +.++||||+|++ +++++|..++......         
T Consensus       219 ~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------  282 (681)
T 2pzi_A          219 QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD---------  282 (681)
T ss_dssp             CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS---------
T ss_pred             cEEEEecccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc---------
Confidence            4799999999865321      3357899999999986543 788999999987 8888887664211000         


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHH-HHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSS-VVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e-vl~~L~~  136 (181)
                                .+.    ...........+.+|+.+||+.||++||+..+ +...|..
T Consensus       283 ----------~~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          283 ----------GLP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             ----------SCC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ----------ccc----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                      000    00001122346788999999999999996554 4444543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.25  E-value=1.7e-12  Score=96.38  Aligned_cols=98  Identities=12%  Similarity=0.048  Sum_probs=61.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||++....                        +..++.++||||+|++ +++++|..|+........       
T Consensus       158 ~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------  206 (299)
T 3m2w_A          158 ILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------  206 (299)
T ss_dssp             CEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------
T ss_pred             cEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------
Confidence            47889999876431                        1345778999999987 899999998743211100       


Q ss_pred             HHHHhcCCcccccCcccccCCc----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCV----GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                           .......+.... ...+    .....++.+++.+||+.||.+|||+.|+++|..-
T Consensus       207 -----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~  260 (299)
T 3m2w_A          207 -----SPGMKTRIRMGQ-YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI  260 (299)
T ss_dssp             ------CCSCCSSCTTC-CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             -----hHHHHHHHhhcc-ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhh
Confidence                 000000000000 0011    1123468899999999999999999999998654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.06  E-value=5.3e-11  Score=89.71  Aligned_cols=112  Identities=10%  Similarity=-0.047  Sum_probs=69.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH--HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL--LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~--~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....       ...+|+..|+|||++.+.. +.++||||+++.  .++..|..|+..      ......
T Consensus       220 ~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~------~~~~~~  285 (336)
T 2vuw_A          220 QVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN------VLWLHY  285 (336)
T ss_dssp             EEEECCCTTCBEEET-------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH------HHHHHH
T ss_pred             eEEEeeccccEecCC-------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc------hhhhhH
Confidence            689999999986532       1347899999999998766 788999998754  456667666411      000000


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHH-HHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVV-VMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl-~~L~  135 (181)
                      .........   ................++.+|+.+||++|     |+.|++ +|-.
T Consensus       286 ~~~~~~~~~---~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~  334 (336)
T 2vuw_A          286 LTDKMLKQM---TFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSL  334 (336)
T ss_dssp             HHHHHHHTC---CCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGG
T ss_pred             HHHhhhhhh---ccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCC
Confidence            111111000   00111111123345668999999999976     999999 7743

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.72  E-value=2.2e-09  Score=79.33  Aligned_cols=87  Identities=13%  Similarity=0.054  Sum_probs=53.9

Q ss_pred             cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCC
Q 041917           43 FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDP  121 (181)
Q Consensus        43 ~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp  121 (181)
                      ++.++||||+|++ +++++|+.||............        .........+  ..........++.+|+.+||+.||
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP  248 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ERDTAGQPIE--PADIDRDIPFQISAVAARSVQGDG  248 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CBCTTSCBCC--HHHHCTTSCHHHHHHHHHHHCTTS
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HHHhccCCCC--hhhcccCCCHHHHHHHHHHcccCC
Confidence            6788999999987 8999999997543221110000        0000000000  000011122458899999999999


Q ss_pred             CCCCCHHHHHHHhhcCCCC
Q 041917          122 ARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus       122 ~~Rpt~~evl~~L~~~~~~  140 (181)
                      ++| |+.|+++.|++....
T Consensus       249 ~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          249 GIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             SCC-CHHHHHHHHHHHHC-
T ss_pred             ccC-CHHHHHHHHHHHhcc
Confidence            999 999999999986554

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.68  E-value=1.1e-06  Score=70.98  Aligned_cols=51  Identities=18%  Similarity=0.062  Sum_probs=25.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL   55 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~   55 (181)
                      ++||+|||+++.....  .....+.+||+.|++||++.+. +...+|+|++|++
T Consensus       377 ~vKL~DFGlAr~~~~~--~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~  427 (569)
T 4azs_A          377 HARLIDFGSIVTTPQD--CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVH  427 (569)
T ss_dssp             CEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC-----------------
T ss_pred             CEEEeecccCeeCCCC--CccccCceechhhccHHHhCCC-CCCcccccccccc
Confidence            5899999999865322  2223456899999999998754 4567899999975

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=96.99  E-value=2.2e-05  Score=62.99  Aligned_cols=63  Identities=17%  Similarity=0.142  Sum_probs=44.2

Q ss_pred             CceeeceecceeecCCCCcc-----cccccccCCCccCcccccc--CccCcccceeehhHH-HHHHhcCCC
Q 041917            2 NPKISDFGMARIFGGNQNEA-----NTNRVVGTYGYMAPEYAME--GVFSIKSDVFSFGVL-LEIVSGKRN   64 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-----~~~~~~g~~~~~aPe~~~~--~~~~~~~diws~gv~-~~~~~g~~~   64 (181)
                      ++||+|||+++.........     .....+||+.|+|||++..  ..|+...|+|+..+- ++.+.++.+
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r  537 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR  537 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence            47999999998763321111     1235689999999999976  557788899987764 666655543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-26
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-24
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-24
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-23
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-22
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-22
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-20
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-20
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-19
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-18
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-18
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-16
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	8e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	0.001

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.7 bits (243), Expect = 8e-26
 Identities = 28/146 (19%), Positives = 59/146 (40%), Gaps = 15/146 (10%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVLL- 56
           +  KI DFG+A +           ++ G+  +MAPE      +  +S +SDV++FG++L 
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200

Query: 57  EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLC 116
           E+++G+            +       +   G     +  V  +S     +     +   C
Sbjct: 201 ELMTGQLPY------SNINNRDQIIFMVGRGYLSPDLSKV--RSNCPKAM---KRLMAEC 249

Query: 117 VQEDPARRPSMSSVVVMLASDTITLP 142
           +++    RP    ++  +     +LP
Sbjct: 250 LKKKRDERPLFPQILASIELLARSLP 275

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (233), Expect = 3e-24
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 17/149 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           +  K++DFG+AR+   N+  A          + APE A+ G F+IKSDV+SFG+LL E+ 
Sbjct: 150 LVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +  R                 +      E L+ ++   +  C          +   C ++
Sbjct: 209 TKGRV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 253

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPA 148
           +P  RP+   +   L     +  P  QP 
Sbjct: 254 EPEERPTFEYLQAFLEDYFTSTEPQYQPG 282

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.1 bits (233), Expect = 3e-24
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 14/148 (9%)

Query: 1   MNPKISDFGMARIF--GGNQNEANTNRVVGTYGYMAPEYAMEGV------FSIKSDVFSF 52
               I+D G+A       +  +   N  VGT  YMAPE   + +         ++D+++ 
Sbjct: 145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204

Query: 53  GVLL-EIVSGKRNSGFYLSKD----GHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELL 107
           G++  EI       G +               + +   +    + + P +       E L
Sbjct: 205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 264

Query: 108 KYIH-IGLLCVQEDPARRPSMSSVVVML 134
           + +  I   C   + A R +   +   L
Sbjct: 265 RVMAKIMRECWYANGAARLTALRIKKTL 292

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (228), Expect = 1e-23
 Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 17/136 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANT-NRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
           +  K+SDFG++R+   +     T +       + APE      F+  SDV+SFG+++ E+
Sbjct: 147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 206

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           ++      + LS                 E ++ ++   +             + + C Q
Sbjct: 207 MTYGERPYWELS---------------NHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQ 251

Query: 119 EDPARRPSMSSVVVML 134
           ++ ARRP  + +V +L
Sbjct: 252 QERARRPKFADIVSIL 267

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.8 bits (219), Expect = 3e-22
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 16/135 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           M  KI+DFG++R                   +M PE      ++ +SDV+++GV+L EI 
Sbjct: 177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 236

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S       Y       ++        +G  L   +    +           ++  LC  +
Sbjct: 237 SYGLQ--PYYGMAHEEVI----YYVRDGNILACPENCPLE---------LYNLMRLCWSK 281

Query: 120 DPARRPSMSSVVVML 134
            PA RPS  S+  +L
Sbjct: 282 LPADRPSFCSIHRIL 296

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 4e-22
 Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 30/165 (18%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            + KI+DFG+A++ G  + E +         +MA E  +  +++ +SDV+S+GV + E++
Sbjct: 148 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +       Y       +      +  +GE L                     I + C   
Sbjct: 208 TFGSK--PYDGIPASEIS----SILEKGERLPQPPICTID---------VYMIMVKCWMI 252

Query: 120 DPARRPSMSSVVVML--------------ASDTITLPPPTQPAFS 150
           D   RP    +++                  + + LP PT   F 
Sbjct: 253 DADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFY 297

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 4e-22
 Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 18/137 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR--VVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-E 57
              K++DFG+AR     + ++  N+        +MA E      F+ KSDV+SFGVLL E
Sbjct: 167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 226

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCV 117
           +++       Y   +   +  Y  +         L+ P          L     + L C 
Sbjct: 227 LMTRGAP--PYPDVNTFDITVYLLQ------GRRLLQP----EYCPDPL---YEVMLKCW 271

Query: 118 QEDPARRPSMSSVVVML 134
                 RPS S +V  +
Sbjct: 272 HPKAEMRPSFSELVSRI 288

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 5e-22
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 17/135 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           ++ KI+DFG+AR+   N+  A          + APE    G F+IKSDV+SFG+LL EIV
Sbjct: 146 LSCKIADFGLARLIEDNEYTARE-GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +  R    Y       ++    +    G  +   D   ++            +  LC +E
Sbjct: 205 THGRI--PYPGMTNPEVI----QNLERGYRMVRPDNCPEE---------LYQLMRLCWKE 249

Query: 120 DPARRPSMSSVVVML 134
            P  RP+   +  +L
Sbjct: 250 RPEDRPTFDYLRSVL 264

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-21
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTN-RVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
              KISDFG+++    ++N             + APE      FS KSDV+SFGVL+ E 
Sbjct: 144 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 203

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
            S  +    Y    G  +      +  +GE +       ++            +  LC  
Sbjct: 204 FSYGQK--PYRGMKGSEVT----AMLEKGERMGCPAGCPRE---------MYDLMNLCWT 248

Query: 119 EDPARRPSMSSVVVML 134
            D   RP  ++V + L
Sbjct: 249 YDVENRPGFAAVELRL 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 1e-20
 Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 17/135 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+SDFGM R    +Q   ++        + +PE      +S KSDV+SFGVL+ E+ 
Sbjct: 138 QVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S  +      S            +        L  P L        +     I   C +E
Sbjct: 197 SEGKIPYENRSNS--------EVVEDISTGFRLYKPRL----ASTHV---YQIMNHCWKE 241

Query: 120 DPARRPSMSSVVVML 134
            P  RP+ S ++  L
Sbjct: 242 RPEDRPAFSRLLRQL 256

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.4 bits (208), Expect = 1e-20
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 23/140 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVG---TYGYMAPEYAMEGVFSIKSDVFSFGVLLE 57
           +  K+SDFG++R    + ++      +G      + APE      F+  SDV+S+G+++ 
Sbjct: 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM- 223

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAEL---LKYIHIGL 114
                             +++Y  + + +    ++++ + +   +   +        + L
Sbjct: 224 ----------------WEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLML 267

Query: 115 LCVQEDPARRPSMSSVVVML 134
            C Q+D   RP    +V  L
Sbjct: 268 DCWQKDRNHRPKFGQIVNTL 287

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 2e-20
 Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI DFG+AR    + +            +MAPE   + V++I+SDV+SFGVLL EI 
Sbjct: 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 230

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
                S       G  +     +   EG  +   D    +              L C   
Sbjct: 231 -----SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHG 276

Query: 120 DPARRPSMSSVVVML 134
           +P++RP+ S +V  L
Sbjct: 277 EPSQRPTFSELVEHL 291

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (203), Expect = 5e-20
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 17/135 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K++DFG++R+  G+   A+         + APE      FSIKSDV++FGVLL EI 
Sbjct: 152 HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +   +   Y   D   +    ++L  +   +E  +   +         K   +   C Q 
Sbjct: 211 TYGMS--PYPGIDLSQV----YELLEKDYRMERPEGCPE---------KVYELMRACWQW 255

Query: 120 DPARRPSMSSVVVML 134
           +P+ RPS + +    
Sbjct: 256 NPSDRPSFAEIHQAF 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 6e-20
 Identities = 25/132 (18%), Positives = 55/132 (41%), Gaps = 20/132 (15%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            + KI D G+A +   +        V+GT  +MAPE   E  +    DV++FG+ + E+ 
Sbjct: 152 GSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEM-YEEKYDESVDVYAFGMCMLEMA 206

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           + +    +   ++   +    ++    G      D V        E+++       C+++
Sbjct: 207 TSEYP--YSECQNAAQI----YRRVTSGVKPASFDKVAIPEV--KEIIE------GCIRQ 252

Query: 120 DPARRPSMSSVV 131
           +   R S+  ++
Sbjct: 253 NKDERYSIKDLL 264

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 1e-19
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 17/135 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+SDFG++R    ++  ++         +  PE  M   FS KSD+++FGVL+ EI 
Sbjct: 137 GVVKVSDFGLSRYVLDDEYTSSVG-SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S  +                 ++ +   E  E +   L+         K   I   C  E
Sbjct: 196 SLGK---------------MPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 240

Query: 120 DPARRPSMSSVVVML 134
               RP+   ++  +
Sbjct: 241 KADERPTFKILLSNI 255

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 2e-19
 Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 18/151 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFG-VLLEIV 59
              KI DFGM R            + +    +M+PE   +GVF+  SDV+SFG VL EI 
Sbjct: 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 229

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +       Y       +L    +   EG  L+  D                 +  +C Q 
Sbjct: 230 TLAEQ--PYQGLSNEQVL----RFVMEGGLLDKPDNCPDM---------LFELMRMCWQY 274

Query: 120 DPARRPSMSSVVVMLASDTITLPPPTQPAFS 150
           +P  RPS   ++  +  +    P   + +F 
Sbjct: 275 NPKMRPSFLEIISSIKEE--MEPGFREVSFY 303

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 3e-19
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 16/132 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVLL-EI 58
            N KISDFG+A +F  N  E   N++ GT  Y+APE      F +   DV+S G++L  +
Sbjct: 140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 199

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           ++G+         D  S     +  W E +    ++P  K       LL         + 
Sbjct: 200 LAGELPW------DQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALLH------KILV 245

Query: 119 EDPARRPSMSSV 130
           E+P+ R ++  +
Sbjct: 246 ENPSARITIPDI 257

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 3e-19
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 1   MNPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
              KI DFG+ R    N +           + + APE      FS  SD + FGV L E+
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
            +  +    ++  +G  +L    K+  EGE L   +   +            ++ + C  
Sbjct: 208 FTYGQE--PWIGLNGSQIL---HKIDKEGERLPRPEDCPQ---------DIYNVMVQCWA 253

Query: 119 EDPARRPSMSSVVVML 134
             P  RP+  ++   L
Sbjct: 254 HKPEDRPTFVALRDFL 269

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 3e-19
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 15/137 (10%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI DFG+AR    + N            +MAPE   EG+++IKSDV+S+G+LL EI 
Sbjct: 201 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 260

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S            G  +    +KL   G  ++      ++            I   C   
Sbjct: 261 SLGV-----NPYPGIPVDANFYKLIQNGFKMDQPFYATEE---------IYIIMQSCWAF 306

Query: 120 DPARRPSMSSVVVMLAS 136
           D  +RPS  ++   L  
Sbjct: 307 DSRKRPSFPNLTSFLGC 323

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 5e-19
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 17/151 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEAN-TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
              KISDFG+++  G + +     +       + APE      FS +SDV+S+GV + E 
Sbjct: 146 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 205

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           +S  +    Y    G  ++        +G+ +E       +            +   C  
Sbjct: 206 LSYGQK--PYKKMKGPEVM----AFIEQGKRMECPPECPPE---------LYALMSDCWI 250

Query: 119 EDPARRPSMSSVVVMLASDTITLPPPTQPAF 149
                RP   +V   + +   +L    +   
Sbjct: 251 YKWEDRPDFLTVEQRMRACYYSLASKVEGHH 281

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 2e-18
 Identities = 35/135 (25%), Positives = 49/135 (36%), Gaps = 21/135 (15%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+SDFG+ +     Q+            + APE   E  FS KSDV+SFG+LL EI 
Sbjct: 140 NVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 194

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S  R    Y       ++        +G  ++  D                 +   C   
Sbjct: 195 SFGRV--PYPRIPLKDVV----PRVEKGYKMDAPDGCPPA---------VYEVMKNCWHL 239

Query: 120 DPARRPSMSSVVVML 134
           D A RPS   +   L
Sbjct: 240 DAAMRPSFLQLREQL 254

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 3e-18
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 19/135 (14%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI+DFG++R   G +             +MA E     V++  SDV+S+GVLL EIV
Sbjct: 164 YVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S       Y       L    ++   +G  LE       +            +   C +E
Sbjct: 221 SLGGT--PYCGMTCAEL----YEKLPQGYRLEKPLNCDDE---------VYDLMRQCWRE 265

Query: 120 DPARRPSMSSVVVML 134
            P  RPS + ++V L
Sbjct: 266 KPYERPSFAQILVSL 280

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 4e-18
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 38/161 (23%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+ DFG++     +      N  VGT  YM+PE      +S++SD++S G+ L E+ 
Sbjct: 142 GEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197

Query: 60  SGKR-----------------------NSGFYLSKDGHSLLTYTWKLWCEGEALELMD-- 94
            G+                         +       G  L +Y           EL+D  
Sbjct: 198 VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYI 257

Query: 95  -----PVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSV 130
                P L       E   +++    C+ ++PA R  +  +
Sbjct: 258 VNEPPPKLPSGVFSLEFQDFVN---KCLIKNPAERADLKQL 295

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 5e-18
 Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI+DFG+AR          T        +MAPE   + +++ +SDV+SFGVLL EI 
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +   +   Y       L    +KL  EG  ++       +            +   C   
Sbjct: 232 TLGGS--PYPGVPVEEL----FKLLKEGHRMDKPSNCTNE---------LYMMMRDCWHA 276

Query: 120 DPARRPSMSSVVVML 134
            P++RP+   +V  L
Sbjct: 277 VPSQRPTFKQLVEDL 291

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 6e-18
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI DFG+AR    + N            +MAPE     V++ +SDV+S+G+ L E+ 
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           S   +    +  D        +K+  EG  +   +    +            I   C   
Sbjct: 242 SLGSSPYPGMPVDSK-----FYKMIKEGFRMLSPEHAPAE---------MYDIMKTCWDA 287

Query: 120 DPARRPSMSSVVVML 134
           DP +RP+   +V ++
Sbjct: 288 DPLKRPTFKQIVQLI 302

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 7e-17
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 19/132 (14%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            N K+ DFG+ARI   + + A     VGT  YM+PE      ++ KSD++S G LL E+ 
Sbjct: 151 QNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 208

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +       + +     L         EG+   +       S    E++         +  
Sbjct: 209 ALMP---PFTAFSQKELA----GKIREGKFRRIPYRY---SDELNEIIT------RMLNL 252

Query: 120 DPARRPSMSSVV 131
               RPS+  ++
Sbjct: 253 KDYHRPSVEEIL 264

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 2e-16
 Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 22/132 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI+DFG +     ++       + GT  Y+ PE     +   K D++S GVL  E +
Sbjct: 143 GELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 198

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            GK        +      TY      E    + +    +      +L+         ++ 
Sbjct: 199 VGKP-----PFEANTYQETYKRISRVEFTFPDFVTEGAR------DLIS------RLLKH 241

Query: 120 DPARRPSMSSVV 131
           +P++RP +  V+
Sbjct: 242 NPSQRPMLREVL 253

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 2e-16
 Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 17/137 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+ DFG++R    +      ++      +MAPE      F+  SDV+ FGV + EI+
Sbjct: 145 DCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
                    +  +              GE L +                   +   C   
Sbjct: 204 MHGVKPFQGVKNND------VIGRIENGERLPMPPNCPPT---------LYSLMTKCWAY 248

Query: 120 DPARRPSMSSVVVMLAS 136
           DP+RRP  + +   L++
Sbjct: 249 DPSRRPRFTELKAQLST 265

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.3 bits (177), Expect = 4e-16
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 25/135 (18%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM---EGVFSIKSDVFSFGVLL- 56
              K+ DFG A I       A  N  VGT  +MAPE  +   EG +  K DV+S G+   
Sbjct: 152 GLVKLGDFGSASIM------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205

Query: 57  EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLC 116
           E+   K       + +  S L             +   P L+          ++     C
Sbjct: 206 ELAERKP---PLFNMNAMSALY---------HIAQNESPALQSGHWSEYFRNFV---DSC 250

Query: 117 VQEDPARRPSMSSVV 131
           +Q+ P  RP+   ++
Sbjct: 251 LQKIPQDRPTSEVLL 265

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 8e-15
 Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 22/136 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL 55
            + K++DFG++          ++   +GT  +MAPE  M     +  +  K+DV+S G+ 
Sbjct: 147 GDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 204

Query: 56  L-EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGL 114
           L E+   +     +   +   +L        + E   L  P    S   +    ++    
Sbjct: 205 LIEMAEIEP---PHHELNPMRVL----LKIAKSEPPTLAQP----SRWSSNFKDFL---K 250

Query: 115 LCVQEDPARRPSMSSV 130
            C++++   R + S +
Sbjct: 251 KCLEKNVDARWTTSQL 266

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.9 bits (165), Expect = 1e-14
 Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 15/140 (10%)

Query: 1   MNPKISDFGMARIFGGNQNEAN-----TNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGV- 54
               I DFG+A+ +   +   +        + GT  Y +    +    S + D+ S G  
Sbjct: 143 NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 202

Query: 55  LLEIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGL 114
           L+    G        +          ++   E + +     VL +    +E   Y++   
Sbjct: 203 LMYFNLGSLPWQGLKAAT----KRQKYERISEKK-MSTPIEVLCKGY-PSEFATYLN--- 253

Query: 115 LCVQEDPARRPSMSSVVVML 134
            C       +P  S +  + 
Sbjct: 254 FCRSLRFDDKPDYSYLRQLF 273

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 22/137 (16%), Positives = 39/137 (28%), Gaps = 15/137 (10%)

Query: 4   KISDFGMARIF-----GGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-E 57
            + DFGM + +       +        + GT  YM+    +    S + D+ + G +   
Sbjct: 146 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMY 205

Query: 58  IVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCV 117
            + G           G    T   K    GE  +        +    E  KY+H      
Sbjct: 206 FLRGSLP------WQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMH---YAR 256

Query: 118 QEDPARRPSMSSVVVML 134
                  P    +  + 
Sbjct: 257 NLAFDATPDYDYLQGLF 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 3e-14
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 17/131 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            + K++DFG        Q++ +T  +VGT  +MAPE      +  K D++S G++  E++
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            G+     YL+++    L     L       EL +P      + A    ++     C+  
Sbjct: 211 EGEP---PYLNENPLRAL----YLIATNGTPELQNP----EKLSAIFRDFL---NRCLDM 256

Query: 120 DPARRPSMSSV 130
           D  +R S   +
Sbjct: 257 DVEKRGSAKEL 267

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 4e-13
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 18/129 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
           M+ +I+DFG A++      +A  N  VGT  Y++PE   E      SD+++ G ++ ++V
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +G      + + + + +     K   E +  E   P  +      +L++        +  
Sbjct: 205 AGLP---PFRAGNEYLIFQKIIK--LEYDFPEKFFPKAR------DLVE------KLLVL 247

Query: 120 DPARRPSMS 128
           D  +R    
Sbjct: 248 DATKRLGCE 256

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 6e-12
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K++DFG+ARI+           VV T  Y APE  ++  ++   D++S G +  E+ 
Sbjct: 153 GQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 209

Query: 60  SGKR-----NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGL 114
             K      +    L K    +     + W    AL       K +    + +  I    
Sbjct: 210 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELG 269

Query: 115 L-----CVQEDPARRPSMSSV 130
                 C+  +PA+R S  S 
Sbjct: 270 KDLLLKCLTFNPAKRISAYSA 290

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
               ISDFG++++          +   GT GY+APE   +  +S   D +S GV+   ++
Sbjct: 147 SKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 203

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            G          D +    +   L  E E        +  S    + ++        +++
Sbjct: 204 CGY-----PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK--DFIR------HLMEK 250

Query: 120 DPARRPSMSSV 130
           DP +R +    
Sbjct: 251 DPEKRFTCEQA 261

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 3e-11
 Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 19/149 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNR--VVGTYGYMAPEYAM-EGVFSIKSDVFSFGVLL- 56
              K++DFG+AR F   +N         V T  Y  PE  + E  +    D++  G ++ 
Sbjct: 154 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 213

Query: 57  EIVSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIH 111
           E+ +             L+       + T ++W   +  EL + +        ++   + 
Sbjct: 214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 273

Query: 112 IGLL----------CVQEDPARRPSMSSV 130
             +            +  DPA+R      
Sbjct: 274 AYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 17/128 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K+ DFG+       Q+        GT  + APE A        +D++S GVL   ++SG 
Sbjct: 166 KLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 222

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                +  ++    L       C+    +     + +     + ++        +  DP 
Sbjct: 223 S---PFGGENDDETLRNVKS--CDWNMDDSAFSGISEDGK--DFIR------KLLLADPN 269

Query: 123 RRPSMSSV 130
            R ++   
Sbjct: 270 TRMTIHQA 277

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 4e-11
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 32/136 (23%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            + KI+DFGM +       +A TN   GT  Y+APE  +   ++   D +SFGVLL E++
Sbjct: 140 GHIKIADFGMCKENM--LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 197

Query: 60  SGKRNSGFYLSKDGHSLL------TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
            G+     +  +D   L          +  W E EA +L+                    
Sbjct: 198 IGQS---PFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLV------------------- 235

Query: 114 LLCVQEDPARRPSMSS 129
                 +P +R  +  
Sbjct: 236 -KLFVREPEKRLGVRG 250

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-11
 Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 29/132 (21%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFGVLL-EI 58
              K+ DFG   +      +       GT  Y  PE+          + V+S G+LL ++
Sbjct: 148 GELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           V G                     +  E +   +   V  +  V +E    I     C+ 
Sbjct: 204 VCG--------------------DIPFEHDEEIIRGQVFFRQRVSSECQHLI---RWCLA 240

Query: 119 EDPARRPSMSSV 130
             P+ RP+   +
Sbjct: 241 LRPSDRPTFEEI 252

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 7e-11
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 17/130 (13%)

Query: 2   NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVS 60
             KI DFG+A              + GT  ++APE        +++D++S GV+   ++S
Sbjct: 155 RIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211

Query: 61  GKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQED 120
           G      +L       L                +     S +  + ++        + +D
Sbjct: 212 GAS---PFLGDTKQETL----ANVSAVNYEFEDEYFSNTSALAKDFIR------RLLVKD 258

Query: 121 PARRPSMSSV 130
           P +R ++   
Sbjct: 259 PKKRMTIQDS 268

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 57.1 bits (137), Expect = 7e-11
 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 15/128 (11%)

Query: 1   MNPKISDFGMARIFGGNQNE-ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EI 58
              K+ DFG+AR    + N    T  V+GT  Y++PE A       +SDV+S G +L E+
Sbjct: 148 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 207

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           ++G+    F     G S ++  ++   E    + + P  +   + A+L   +   L  + 
Sbjct: 208 LTGEPP--FT----GDSPVSVAYQHVRE----DPIPPSARHEGLSADLDAVV---LKALA 254

Query: 119 EDPARRPS 126
           ++P  R  
Sbjct: 255 KNPENRYQ 262

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 57.4 bits (138), Expect = 8e-11
 Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 17/128 (13%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           KI DFG+A     ++          T  + APE          +D+++ GVL   ++SG 
Sbjct: 169 KIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 225

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
                        L T      C+ E  E     +       + +K        +Q++P 
Sbjct: 226 S-----PFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK--DFIKN------LLQKEPR 272

Query: 123 RRPSMSSV 130
           +R ++   
Sbjct: 273 KRLTVHDA 280

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-10
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI +FG AR      N      +     Y APE     V S  +D++S G L+  ++
Sbjct: 141 STIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           SG      +L++    ++    +     E     +   + S    + +         + +
Sbjct: 198 SGIN---PFLAETNQQII----ENIMNAEYTFDEEAFKEISIEAMDFVDR------LLVK 244

Query: 120 DPARRPSMSSV 130
           +   R + S  
Sbjct: 245 ERKSRMTASEA 255

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 7e-10
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 23/165 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVLL-EI 58
              K++DFG+A+ FG           V T  Y APE      ++ +  D+++ G +L E+
Sbjct: 137 GVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 194

Query: 59  VSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQ---------SCVGA 104
           +         +    L++   +L T T + W +  +L                  S  G 
Sbjct: 195 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGD 254

Query: 105 ELLKYIHIGLLCVQEDPARRPSMSSVVVM--LASDTITLPPPTQP 147
           +LL  I         +P  R + +  + M   ++     P    P
Sbjct: 255 DLLDLIQ---GLFLFNPCARITATQALKMKYFSNRPGPTPGCQLP 296

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 23/137 (16%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV------FSIKSDVFSFGV 54
           MN K++DFG +      +       V GT  Y+APE     +      +  + D++S GV
Sbjct: 147 MNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 203

Query: 55  LL-EIVSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
           ++  +++G      +  +    +L    ++   G            S    +L+      
Sbjct: 204 IMYTLLAGSP---PFWHRKQMLML----RMIMSGNYQFGSPEWDDYSDTVKDLVS----- 251

Query: 114 LLCVQEDPARRPSMSSV 130
              +   P +R +    
Sbjct: 252 -RFLVVQPQKRYTAEEA 267

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.4 bits (127), Expect = 2e-09
 Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 16/144 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-EGVFSIKSDVFSFGVL-LEI 58
              KI+DFG+AR FG    +      + T  Y AP+  M    +S   D++S G +  E+
Sbjct: 137 GELKIADFGLARAFGIPVRKYTH--EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194

Query: 59  VSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDP--VLKQSCVGAELLKYIH 111
           V+G       +    L +    L T   K W     L   DP   + +       LK + 
Sbjct: 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD 254

Query: 112 IGLL-----CVQEDPARRPSMSSV 130
              +      ++ DP +R +    
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQA 278

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 13/128 (10%)

Query: 4   KISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIVSGK 62
           K++DFG A+    + +         T  Y+APE      +    D++S GV++  ++ G 
Sbjct: 154 KLTDFGFAKETTSHNSLTTPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 210

Query: 63  RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPA 122
               FY     +  L  +  +       +   P  + S V  E+   I      ++ +P 
Sbjct: 211 PP--FY----SNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPT 261

Query: 123 RRPSMSSV 130
           +R +++  
Sbjct: 262 QRMTITEF 269

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 3e-09
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 15/144 (10%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+++FG+AR FG       +  VV  +           ++S   D++S G +  E+ 
Sbjct: 138 GELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196

Query: 60  SGKR------NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
           +  R      +    L +    L T T + W     L    P        + +     + 
Sbjct: 197 NAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN 256

Query: 114 -----LL--CVQEDPARRPSMSSV 130
                LL   ++ +P +R S    
Sbjct: 257 ATGRDLLQNLLKCNPVQRISAEEA 280

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 16/144 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPE-YAMEGVFSIKSDVFSFG-VLLEI 58
              K++DFG+AR FG           V T  Y APE       +S   D++S G +  E+
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTH--EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196

Query: 59  VSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG 113
           V+ +      +    L +   +L T    +W    ++    P   +            + 
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256

Query: 114 -----LL--CVQEDPARRPSMSSV 130
                LL   +  DP +R S  + 
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA 280

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 17/147 (11%)

Query: 1   MNPKISDFGMARIFGGNQNEANT-NRVVGTYGYMAPEYAMEGVFSIKS-DVFSFGVLL-E 57
            + KI DFG+AR+   + +        V T  Y APE  +      KS D++S G +L E
Sbjct: 146 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 205

Query: 58  IVSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIH- 111
           ++S +     ++    L+     L + + +       L+  + +L            +  
Sbjct: 206 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP 265

Query: 112 ------IGLL--CVQEDPARRPSMSSV 130
                 + LL   +  +P +R  +   
Sbjct: 266 NADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.0 bits (124), Expect = 5e-09
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 20/129 (15%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EI 58
            + +ISD G+A  F   +     +  VGT+GYMAPE   +GV +   +D FS G +L ++
Sbjct: 144 GHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 199

Query: 59  VSGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQ 118
           + G     F   K           L    E  +   P L+       LL+        +Q
Sbjct: 200 LRGHSP--FRQHKTKDKHEIDRMTLTMAVELPDSFSPELR------SLLE------GLLQ 245

Query: 119 EDPARRPSM 127
            D  RR   
Sbjct: 246 RDVNRRLGC 254

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            + KI+DFG A+             + GT  Y+APE      ++   D +SFG+L+ E++
Sbjct: 141 GHIKITDFGFAKYVPDVTY-----TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195

Query: 60  SGKR 63
           +G  
Sbjct: 196 AGYT 199

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 20/128 (15%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
            + KI+DFG+ +   G  + A      GT  Y+APE   +  +    D +  GV++ E++
Sbjct: 142 GHIKITDFGLCKE--GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
            G+     + ++D   L         E      + P  K       LL         +++
Sbjct: 200 CGRL---PFYNQDHERLFELILM--EEIRFPRTLSPEAK------SLLA------GLLKK 242

Query: 120 DPARRPSM 127
           DP +R   
Sbjct: 243 DPKQRLGG 250

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 6e-07
 Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 15/143 (10%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              K+ DFG A+     + E N + +   Y            ++   DV+S G +L E++
Sbjct: 160 AVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217

Query: 60  SGKR-----NSGFYLSKDGHSLLTYTWKLWCEG--EALELMDPVLKQSCVGAELLKYIHI 112
            G+      +    L +    L T T +   E      E   P +K              
Sbjct: 218 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277

Query: 113 GLL-----CVQEDPARRPSMSSV 130
             +      ++  P  R +    
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEA 300

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 4e-05
 Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 21/146 (14%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVLL-EI 58
              KI DFG+AR     Q ++     V T  Y APE  +  + ++   D++S G ++ E+
Sbjct: 158 CELKILDFGLAR-----QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 212

Query: 59  VSGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIH-- 111
           ++GK      +    L +      T   +     ++ E  + +     +  +    I   
Sbjct: 213 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTN 272

Query: 112 -----IGLL--CVQEDPARRPSMSSV 130
                + LL   +  D  +R +    
Sbjct: 273 ASPLAVNLLEKMLVLDAEQRVTAGEA 298

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 6e-05
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
              KI DFG+AR  G +         V T  Y APE  +   +    D++S G +  E+V
Sbjct: 156 CTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

Query: 60  SGK 62
             K
Sbjct: 213 RHK 215

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 19/132 (14%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVLL-E 57
            +  ++DFG+++ F  ++ E       GT  YMAP+    G        D +S GVL+ E
Sbjct: 166 GHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 224

Query: 58  IVSGKRNSGFYLSKDGHSLLT-YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLC 116
           +++G     F +  + +S        L  E    + M  + K      +L++        
Sbjct: 225 LLTGASP--FTVDGEKNSQAEISRRILKSEPPYPQEMSALAK------DLIQ------RL 270

Query: 117 VQEDPARRPSMS 128
           + +DP +R    
Sbjct: 271 LMKDPKKRLGCG 282

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 32/160 (20%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
               +    +A +      + +    + T  Y +PE  +   +   +D++S   L+ E++
Sbjct: 164 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

Query: 60  SGKR----NSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIH---- 111
           +G      + G   +KD   +      L      L       +       LL+ I     
Sbjct: 224 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 283

Query: 112 ---------------------IGLL--CVQEDPARRPSMS 128
                                   L   +Q DP +R    
Sbjct: 284 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (84), Expect = 8e-04
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 23/126 (18%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIV 59
              +++DFG A+   G         + GT   +APE  +   ++   D ++ GVL  E+ 
Sbjct: 178 GYIQVTDFGFAKRVKGRTWT-----LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

Query: 60  SGKRNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQE 119
           +G              +  Y   +  +          LK       LL+        +Q 
Sbjct: 233 AGY-----PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKD------LLRN------LLQV 275

Query: 120 DPARRP 125
           D  +R 
Sbjct: 276 DLTKRF 281

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 19/143 (13%)

Query: 1   MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVLL-EIV 59
              KI DFG+AR          T  V   +            ++   D++S G ++ E++
Sbjct: 158 CELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213

Query: 60  SGK-----RNSGFYLSKDGHSLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIG- 113
           +G+      +    L      + T   +L  +  +    + +   + +       + IG 
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 273

Query: 114 ------LL--CVQEDPARRPSMS 128
                 LL   +  D  +R + +
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAA 296

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.86
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.86
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.85
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.85
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.85
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.84
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.84
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.84
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.83
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.83
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.83
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.83
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.83
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.82
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.82
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.82
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.82
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.81
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.81
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.81
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.81
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.81
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.81
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.8
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.8
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.79
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.79
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.79
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.79
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.79
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.78
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.78
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.78
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.77
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.77
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.76
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.76
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.76
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.75
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.75
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.74
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.74
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.74
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.73
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.72
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.7
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.7
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.7
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.69
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.68
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.68
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.66
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.65
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.65
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.63
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.63
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.63
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.62
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.58
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.51

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.5e-24  Score=154.51  Aligned_cols=130  Identities=18%  Similarity=0.276  Sum_probs=82.9

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcch
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSL   76 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~   76 (181)
                      +++||+|||+++...............||+.|+|||++..   ..|+.++||||+||+ |++++|+.||....   ... 
T Consensus       141 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~---~~~-  216 (276)
T d1uwha_         141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN---NRD-  216 (276)
T ss_dssp             SSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC---CHH-
T ss_pred             CCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC---hHH-
Confidence            3689999999986543333333445689999999999864   347889999999987 99999999974321   111 


Q ss_pred             HHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCC
Q 041917           77 LTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITL  141 (181)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~  141 (181)
                        ..............+.     ..+.....++.+|+.+||+.||++|||+.||+++|+.+...+
T Consensus       217 --~~~~~~~~~~~~p~~~-----~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         217 --QIIFMVGRGYLSPDLS-----KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             --HHHHHHHHTSCCCCGG-----GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHhcCCCCCcch-----hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence              1111111111111110     111122346889999999999999999999999999876543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.2e-23  Score=152.43  Aligned_cols=121  Identities=29%  Similarity=0.361  Sum_probs=79.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCC-CCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRN-SGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~-~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............||+.|+|||++.+..++.++||||+||+ ++++++..+ +...  .....+   
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~--~~~~~~---  246 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--KIDEEF---  246 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CCSHHH---
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCC--CHHHHH---
Confidence            689999999986544444334445689999999999999999999999999987 899987654 3211  111111   


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       ......+.....         +.....++.+++.+||+.||++|||+.||++||+++
T Consensus       247 -~~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         247 -CRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             -HHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HHHHhcCCCCCC---------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence             111111111111         111224688999999999999999999999999875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.3e-24  Score=157.97  Aligned_cols=119  Identities=31%  Similarity=0.363  Sum_probs=84.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............||+.|+|||++.+..++.++||||+||+ |++++ |..||....   .....  
T Consensus       202 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~---~~~~~--  276 (325)
T d1rjba_         202 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP---VDANF--  276 (325)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC---CSHHH--
T ss_pred             eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC---HHHHH--
Confidence            589999999987544433333345678999999999999999999999999987 89997 777764221   11111  


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                       ........         +...+.....++.+|+.+||+.||++|||+.||+++|.
T Consensus       277 -~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         277 -YKLIQNGF---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             -HHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -HHHHhcCC---------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence             11111111         11112222346889999999999999999999999995

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.5e-24  Score=153.56  Aligned_cols=120  Identities=28%  Similarity=0.282  Sum_probs=74.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....... .......|+..|+|||++.+..|+.++||||+||+ |+++++..|+...     .......
T Consensus       139 ~~Kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~-----~~~~~~~  212 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-----RSNSEVV  212 (263)
T ss_dssp             CEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS-----CCHHHHH
T ss_pred             CeEecccchheeccCCCc-eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCC-----CCHHHHH
Confidence            689999999986533221 12223578899999999999999999999999987 8999976654221     1111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .. ......  ...       +.....++.+|+.+||+.||++|||+.||+++|+++
T Consensus       213 ~~-i~~~~~--~~~-------p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         213 ED-ISTGFR--LYK-------PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HH-HHHTCC--CCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH-HHhcCC--CCC-------ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            11 111111  111       112234688999999999999999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.6e-23  Score=153.60  Aligned_cols=124  Identities=23%  Similarity=0.299  Sum_probs=78.2

Q ss_pred             CCceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            1 MNPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      +++||+|||+++......... ......||..|+|||++.+..++.++||||+||+ |+++++..|+....  .   ...
T Consensus       147 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~--~---~~~  221 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--S---NHE  221 (283)
T ss_dssp             CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--C---HHH
T ss_pred             CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC--C---HHH
Confidence            468999999998754322211 2233467889999999999999999999999987 89999777653211  1   111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      . ........     .+    ..+.....++.+|+.+||+.||++|||+.||++.|+.+..
T Consensus       222 ~-~~~i~~~~-----~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         222 V-MKAINDGF-----RL----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             H-HHHHHTTC-----CC----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             H-HHHHhccC-----CC----CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            1 11111111     11    1112223468899999999999999999999999987543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=1.1e-23  Score=155.80  Aligned_cols=123  Identities=24%  Similarity=0.296  Sum_probs=83.8

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +++||+|||+++...............|+..|+|||.+.+..|+.++|||||||+ |++++|..++...     ....+.
T Consensus       177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~-----~~~~e~  251 (301)
T d1lufa_         177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG-----MAHEEV  251 (301)
T ss_dssp             GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-----SCHHHH
T ss_pred             CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC-----CCHHHH
Confidence            3689999999986543323333344678889999999999999999999999987 8999886543211     111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ... ...+.....         +.....++.+|+.+||+.||++||||.||++.|+++.
T Consensus       252 ~~~-v~~~~~~~~---------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         252 IYY-VRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHH-HHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHH-HHcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            111 222221111         1122246889999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.3e-23  Score=152.31  Aligned_cols=121  Identities=22%  Similarity=0.373  Sum_probs=81.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++...............||..|+|||++.+..|+.++||||+||+ |++++ |..|+...   ....+...
T Consensus       149 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~---~~~~~~~~  225 (317)
T d1xkka_         149 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSI  225 (317)
T ss_dssp             EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS---CGGGHHHH
T ss_pred             CeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC---CHHHHHHH
Confidence            689999999987644333333334568999999999999999999999999987 89998 55555321   11222221


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      .    ..+...         ..+.....++.+|+.+||+.||++|||+.||+.+|+.+.
T Consensus       226 i----~~~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         226 L----EKGERL---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             H----HHTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H----HcCCCC---------CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            1    111111         111122346889999999999999999999999987654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=9.5e-23  Score=150.50  Aligned_cols=122  Identities=23%  Similarity=0.242  Sum_probs=74.1

Q ss_pred             CCceeeceecceeecCCCCcc---cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcc
Q 041917            1 MNPKISDFGMARIFGGNQNEA---NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHS   75 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~---~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~   75 (181)
                      +++||+|||+++.........   ......|++.|+|||.+.+..++.++|||||||+ |++++ |..|+....      
T Consensus       165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~------  238 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT------  238 (299)
T ss_dssp             CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------
T ss_pred             CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC------
Confidence            468999999998654322211   1122457889999999998899999999999987 89997 777763221      


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ...... ....+...         ..+.....++.+|+.+||+.||++|||+.||++.|+.+.
T Consensus       239 ~~~~~~-~i~~~~~~---------~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         239 NQDVIN-AIEQDYRL---------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             HHHHHH-HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHcCCCC---------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            111111 11111111         111223346889999999999999999999999998753

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.4e-22  Score=146.63  Aligned_cols=119  Identities=26%  Similarity=0.301  Sum_probs=82.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....... .......|+..|+|||.+.+..++.++||||+|++ |++++ |+.|+...      ...+.
T Consensus       138 ~~kl~DfG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~------~~~~~  210 (258)
T d1k2pa_         138 VVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------TNSET  210 (258)
T ss_dssp             CEEECCCSSCCBCSSSSC-CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS------CHHHH
T ss_pred             cEEECcchhheeccCCCc-eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC------CHHHH
Confidence            689999999976533222 12233568889999999999999999999999987 89997 67776321      11111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                       .........  ...       +.....++.+|+.+||+.||++|||+.+|+.||.++
T Consensus       211 -~~~i~~~~~--~~~-------p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         211 -AEHIAQGLR--LYR-------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             -HHHHHTTCC--CCC-------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             -HHHHHhCCC--CCC-------cccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence             112222111  111       112234688999999999999999999999999764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.4e-23  Score=149.94  Aligned_cols=120  Identities=28%  Similarity=0.326  Sum_probs=82.7

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +++||+|||+++...... ........|+..|+|||++....++.++||||+||+ |++++|..|+...     ......
T Consensus       146 ~~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~-----~~~~~~  219 (272)
T d1qpca_         146 LSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-----MTNPEV  219 (272)
T ss_dssp             SCEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT-----CCHHHH
T ss_pred             cceeeccccceEEccCCc-cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCC-----CCHHHH
Confidence            368999999998764322 222234578889999999998889999999999987 8999977665321     111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .. ......     .+    ..+.....++.+|+.+||+.||++|||+.+|++.|+.
T Consensus       220 ~~-~i~~~~-----~~----~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         220 IQ-NLERGY-----RM----VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HH-HHHTTC-----CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH-HHHhcC-----CC----CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            11 111111     11    1111223468899999999999999999999998875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.8e-22  Score=148.06  Aligned_cols=120  Identities=24%  Similarity=0.324  Sum_probs=84.0

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++......... ......|+..|+|||++....++.++||||+||+ |++++ |..||...   ....+..
T Consensus       147 ~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~---~~~~~~~  223 (285)
T d1u59a_         147 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM---KGPEVMA  223 (285)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC---CTHHHHH
T ss_pred             ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCC---CHHHHHH
Confidence            58999999998764432222 2234568889999999998899999999999987 89987 78887421   1111211


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          ....+....         .+.....++.+|+.+||+.||++|||+.+|++.|+..
T Consensus       224 ----~i~~~~~~~---------~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         224 ----FIEQGKRME---------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             ----HHHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HHHcCCCCC---------CCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                112221111         1122234688999999999999999999999988754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.5e-21  Score=140.87  Aligned_cols=115  Identities=21%  Similarity=0.313  Sum_probs=78.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++....    ......+||+.|+|||++.+ .++.++||||+||+ +++++|..||...     ..... .
T Consensus       153 ~~Kl~DFGla~~~~~----~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~-----~~~~~-~  221 (270)
T d1t4ha_         153 SVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-----QNAAQ-I  221 (270)
T ss_dssp             CEEECCTTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-----SSHHH-H
T ss_pred             CEEEeecCcceeccC----CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCc-----ccHHH-H
Confidence            589999999975322    12235689999999998865 58999999999987 9999999997421     11111 1


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..........    ....    .....++.+|+.+||+.||++|||+.|+++|-.
T Consensus       222 ~~~i~~~~~~----~~~~----~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~  268 (270)
T d1t4ha_         222 YRRVTSGVKP----ASFD----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF  268 (270)
T ss_dssp             HHHHTTTCCC----GGGG----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHcCCCC----cccC----ccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcc
Confidence            1122111111    1111    112235788999999999999999999998753

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.1e-22  Score=143.82  Aligned_cols=121  Identities=26%  Similarity=0.340  Sum_probs=81.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++..............+||+.|+|||++.+..+ +.++||||+||+ +++++|..||.....  ..  ...
T Consensus       141 ~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~--~~--~~~  216 (271)
T d1nvra_         141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SC--QEY  216 (271)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST--TS--HHH
T ss_pred             CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh--HH--HHH
Confidence            589999999987543332233345689999999999988776 467999999987 899999999743211  11  111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .  ........  ..+      ......++.+|+.+||+.||++|||+.||++|-+-
T Consensus       217 ~--~~~~~~~~--~~~------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf  263 (271)
T d1nvra_         217 S--DWKEKKTY--LNP------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY  263 (271)
T ss_dssp             H--HHHTTCTT--STT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             H--HHhcCCCC--CCc------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            1  11111111  000      01112367789999999999999999999987543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.1e-22  Score=149.42  Aligned_cols=122  Identities=25%  Similarity=0.285  Sum_probs=84.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++........ ......|+..|+|||++.+..|+.++||||+||+ |+++++..|+...     ...... 
T Consensus       153 ~~Kl~DFG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~-----~~~~~~-  225 (287)
T d1opja_         153 LVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQV-  225 (287)
T ss_dssp             CEEECCCCCTTTCCSSSSE-EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTT-----CCHHHH-
T ss_pred             cEEEccccceeecCCCCce-eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCc-----chHHHH-
Confidence            6899999999865432222 2223457888999999999999999999999987 8999987775321     111111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      ........         +...+.....++.+|+.+||+.||++|||+.||++.|+.+..
T Consensus       226 ~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         226 YELLEKDY---------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             HHHHhcCC---------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            11111111         111112223468899999999999999999999999987754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.1e-22  Score=146.23  Aligned_cols=119  Identities=29%  Similarity=0.348  Sum_probs=81.2

Q ss_pred             CceeeceecceeecCCCCcc-cccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEA-NTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~-~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++......... ......||+.|+|||.+.+..++.++||||+||+ |++++ |..||...   .   ...
T Consensus       145 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~---~---~~~  218 (277)
T d1xbba_         145 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM---K---GSE  218 (277)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC---C---HHH
T ss_pred             cccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC---C---HHH
Confidence            57999999998764332222 2233578899999999998889999999999987 89987 78776421   1   111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ......+...         ..+.....++.+|+.+||+.||++|||+.+|+..|++
T Consensus       219 ~-~~~i~~~~~~---------~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         219 V-TAMLEKGERM---------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             H-HHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             H-HHHHHcCCCC---------CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            1 1111111111         1112223468899999999999999999999988865

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.5e-22  Score=147.32  Aligned_cols=115  Identities=25%  Similarity=0.251  Sum_probs=77.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......  ......+||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ..... 
T Consensus       152 ~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~------~~~~~-  222 (269)
T d2java1         152 NVKLGDFGLARILNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF------SQKEL-  222 (269)
T ss_dssp             CEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHH-
T ss_pred             cEEEeeccceeecccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCC------CHHHH-
Confidence            58999999998653222  22334689999999999999899999999999987 8999999987421      11111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ...........+.         .....++.+|+.+||+.||++|||+.||++|-
T Consensus       223 ~~~i~~~~~~~~~---------~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp  267 (269)
T d2java1         223 AGKIREGKFRRIP---------YRYSDELNEIITRMLNLKDYHRPSVEEILENP  267 (269)
T ss_dssp             HHHHHHTCCCCCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             HHHHHcCCCCCCC---------cccCHHHHHHHHHHcCCChhHCcCHHHHHhCC
Confidence            1112222211111         11224688999999999999999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-22  Score=147.24  Aligned_cols=127  Identities=25%  Similarity=0.323  Sum_probs=82.1

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +++||+|||+++....... .......|+..|+|||.+....++.++||||+|++ |++++|..|+...     ......
T Consensus       150 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~-----~~~~~~  223 (285)
T d1fmka3         150 LVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----MVNREV  223 (285)
T ss_dssp             GCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-----CCHHHH
T ss_pred             CcEEEcccchhhhccCCCc-eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCC-----CCHHHH
Confidence            3689999999986532221 22233568899999999999999999999999987 8999987775321     111111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCCCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTITLPP  143 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~~~~  143 (181)
                      ... ......     .    ..+.....++.+|+.+||+.||++||++.+|+..|+.......+
T Consensus       224 ~~~-i~~~~~-----~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         224 LDQ-VERGYR-----M----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             HHH-HHTTCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             HHH-HHhcCC-----C----CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence            111 111111     1    11122234688999999999999999999999999987655443

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.9e-21  Score=140.77  Aligned_cols=119  Identities=22%  Similarity=0.303  Sum_probs=83.3

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......  ......+||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       154 ~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~------~~~~~~  225 (293)
T d1yhwa1         154 SVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRAL  225 (293)
T ss_dssp             CEEECCCTTCEECCSTT--CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHH
T ss_pred             cEeeccchhheeecccc--ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCC------CHHHHH
Confidence            68999999998754322  22334689999999999999899999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ......... ...       .+.....++.+|+.+||+.||++|||+.|+++|-.-
T Consensus       226 ~~~~~~~~~-~~~-------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~  273 (293)
T d1yhwa1         226 YLIATNGTP-ELQ-------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL  273 (293)
T ss_dssp             HHHHHHCSC-CCS-------SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGG
T ss_pred             HHHHhCCCC-CCC-------CcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhh
Confidence            111111111 110       111223468889999999999999999999988543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.6e-21  Score=139.49  Aligned_cols=113  Identities=22%  Similarity=0.264  Sum_probs=81.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....    ......||+.|+|||++.+..|+.++||||+||+ +++++|+.||...      ..... 
T Consensus       144 ~~kl~DFG~a~~~~~~----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~-  212 (263)
T d2j4za1         144 ELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------TYQET-  212 (263)
T ss_dssp             CEEECCCCSCSCCCCC----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHH-
T ss_pred             CEeecccceeeecCCC----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCC------CHHHH-
Confidence            5899999999764322    2234579999999999999889999999999987 8999999997421      11111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ......... .+     .    .....++.+|+.+||+.||++|||+.||++|-.
T Consensus       213 ~~~i~~~~~-~~-----p----~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~  257 (263)
T d2j4za1         213 YKRISRVEF-TF-----P----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW  257 (263)
T ss_dssp             HHHHHTTCC-CC-----C----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred             HHHHHcCCC-CC-----C----ccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcC
Confidence            111111111 11     1    112246888999999999999999999998743

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.9e-22  Score=144.88  Aligned_cols=119  Identities=24%  Similarity=0.302  Sum_probs=72.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++....... .......||+.|+|||++....++.++||||+||+ |++++ |..|+...   ....+...
T Consensus       146 ~~Kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~---~~~~~~~~  221 (273)
T d1mp8a_         146 CVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV---KNNDVIGR  221 (273)
T ss_dssp             EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC---CGGGHHHH
T ss_pred             cEEEccchhheeccCCcc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCC---CHHHHHHH
Confidence            589999999986532221 22234567889999999998899999999999987 88887 66665322   11222211


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                          ........         .+.....++.+|+.+||+.||++|||+.||+++|+.+
T Consensus       222 ----i~~~~~~~---------~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         222 ----IENGERLP---------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             ----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HHcCCCCC---------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                11111111         1112234688999999999999999999999999865

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6e-22  Score=146.93  Aligned_cols=125  Identities=26%  Similarity=0.312  Sum_probs=85.0

Q ss_pred             CCceeeceecceeecCCCCc--ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            1 MNPKISDFGMARIFGGNQNE--ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~--~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      +.+||+|||+++........  .......|+..|+|||.+....++.++||||||++ +++++|..|+....  ....+.
T Consensus       167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~--~~~~~~  244 (311)
T d1r0pa_         167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDIT  244 (311)
T ss_dssp             CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CH
T ss_pred             CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC--CHHHHH
Confidence            36899999999865432221  11223468889999999998889999999999987 89999888764321  111111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCCC
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTIT  140 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~~  140 (181)
                      ...    ..+..  ...       +.....++.+|+.+||+.||++||++.||+++|+++...
T Consensus       245 ~~i----~~g~~--~~~-------p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         245 VYL----LQGRR--LLQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHH----HTTCC--CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHH----HcCCC--CCC-------cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            111    11111  111       111224688999999999999999999999999987554

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.6e-22  Score=147.96  Aligned_cols=124  Identities=27%  Similarity=0.326  Sum_probs=86.0

Q ss_pred             CCceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            1 MNPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      +++||+|||+++...............|++.|+|||.+.+..++.++||||+|++ |++++|..++..     .......
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~-----~~~~~~~  244 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQV  244 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT-----TSCHHHH
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCC-----CCCHHHH
Confidence            4689999999986543333333344578899999999999999999999999987 899998654321     1122222


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                      .... ........         +......+.+++.+||+.||++|||+.+|+++|++...
T Consensus       245 ~~~i-~~~~~~~~---------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         245 LRFV-MEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHH-HTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHH-HhCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            2111 11111111         11222468899999999999999999999999988633

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.1e-20  Score=139.59  Aligned_cols=134  Identities=21%  Similarity=0.223  Sum_probs=85.7

Q ss_pred             CCceeeceecceeecCCCCcc--cccccccCCCccCccccccC------ccCcccceeehhHH-HHHHhcCCCCCCCcCC
Q 041917            1 MNPKISDFGMARIFGGNQNEA--NTNRVVGTYGYMAPEYAMEG------VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSK   71 (181)
Q Consensus         1 ~~~ki~dfgl~~~~~~~~~~~--~~~~~~g~~~~~aPe~~~~~------~~~~~~diws~gv~-~~~~~g~~~~~~~~~~   71 (181)
                      +++||+|||+++.........  ......||+.|+|||++...      .++.++|||||||+ |++++|..++......
T Consensus       145 ~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~  224 (303)
T d1vjya_         145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccc
Confidence            468999999998765433221  23346799999999998653      25678999999987 9999998765432211


Q ss_pred             CC--------cchHHHHHHHHhcCCcccccCcccccCC-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           72 DG--------HSLLTYTWKLWCEGEALELMDPVLKQSC-VGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        72 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ..        ..............    ..++.+.... .......+.+++.+||+.||++|||+.||+++|+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         225 QLPYYDLVPSDPSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTS----CCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhhcccccchHHHHHHHHhcc----ccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            11        01111112222111    1222222222 2234556889999999999999999999999998653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=8.7e-21  Score=140.33  Aligned_cols=118  Identities=20%  Similarity=0.187  Sum_probs=71.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....   ......+||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       148 ~vkl~DFG~a~~~~~~---~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~~~~~  218 (307)
T d1a06a_         148 KIMISDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE------NDAKLF  218 (307)
T ss_dssp             CEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHH
T ss_pred             eEEEeccceeEEccCC---CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCC------CHHHHH
Confidence            5899999999865322   12234689999999999999999999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .. ...... ....+ .    ......++.+|+.+||+.||++|||+.|+++|-.
T Consensus       219 ~~-i~~~~~-~~~~~-~----~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~  266 (307)
T d1a06a_         219 EQ-ILKAEY-EFDSP-Y----WDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW  266 (307)
T ss_dssp             HH-HHTTCC-CCCTT-T----TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred             HH-HhccCC-CCCCc-c----ccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence            11 111111 11111 1    1112246889999999999999999999999854

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.6e-21  Score=145.28  Aligned_cols=123  Identities=26%  Similarity=0.353  Sum_probs=78.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+|+....    ....+.+||..|+|||++.+..|+.++||||+||+ +++++|+.||.......   .....
T Consensus       143 ~vkl~DFGla~~~~~----~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~---~~~~~  215 (322)
T d1s9ja_         143 EIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE---LELMF  215 (322)
T ss_dssp             CEEECCCCCCHHHHH----HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTH---HHHHC
T ss_pred             CEEEeeCCCccccCC----CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHH
Confidence            689999999985422    12234689999999999999999999999999987 89999999985322110   00000


Q ss_pred             HHHHhcC--------------------------Ccccc-------cCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCH
Q 041917           81 WKLWCEG--------------------------EALEL-------MDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSM  127 (181)
Q Consensus        81 ~~~~~~~--------------------------~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~  127 (181)
                      .......                          .....       ..+.+.   ......++.+|+.+||..||++|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~ta  292 (322)
T d1s9ja_         216 GCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP---SGVFSLEFQDFVNKCLIKNPAERADL  292 (322)
T ss_dssp             ------------------------------CCCCHHHHHHHHHTSCCCCCC---BTTBCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCc---cccCCHHHHHHHHHHcCCChhHCcCH
Confidence            0000000                          00000       000000   00113468889999999999999999


Q ss_pred             HHHHHHh
Q 041917          128 SSVVVML  134 (181)
Q Consensus       128 ~evl~~L  134 (181)
                      .|+++|-
T Consensus       293 ~e~L~Hp  299 (322)
T d1s9ja_         293 KQLMVHA  299 (322)
T ss_dssp             HHHHTSH
T ss_pred             HHHhhCH
Confidence            9999873

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4.9e-21  Score=140.48  Aligned_cols=114  Identities=20%  Similarity=0.246  Sum_probs=77.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++..............+||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ..... 
T Consensus       146 ~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~~~~-  218 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG------NEYLI-  218 (288)
T ss_dssp             CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHH-
T ss_pred             eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc------CHHHH-
Confidence            589999999987654333333445689999999999999999999999999987 8999999997421      11111 


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      ......... .+.         .....++.+|+.+||+.||++|||+.|++.
T Consensus       219 ~~~i~~~~~-~~p---------~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         219 FQKIIKLEY-DFP---------EKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHTTCC-CCC---------TTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHHHcCCC-CCC---------ccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            111111111 111         112246789999999999999999998643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=6.3e-22  Score=146.71  Aligned_cols=120  Identities=26%  Similarity=0.214  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++....   ........|+..|+|||.+.+..++.++|||||||+ |++++|..++..     ........
T Consensus       165 ~~kl~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~-----~~~~~~~~  236 (309)
T d1fvra_         165 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-----GMTCAELY  236 (309)
T ss_dssp             CEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT-----TCCHHHHH
T ss_pred             ceEEccccccccccc---cccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCC-----CCCHHHHH
Confidence            579999999975421   111223468899999999999999999999999987 899998765321     11111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCCC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDTI  139 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~~  139 (181)
                       ........         ...+.....++.+|+.+||+.||++|||+.||+++|+++..
T Consensus       237 -~~i~~~~~---------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         237 -EKLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             -HHGGGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHHHhcCC---------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             11111111         11122233468899999999999999999999999988754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.7e-20  Score=136.70  Aligned_cols=121  Identities=24%  Similarity=0.278  Sum_probs=81.9

Q ss_pred             CceeeceecceeecCCCCcccc-cccccCCCccCccccccCccCcccceeehhHH-HHHHh-cCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANT-NRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVS-GKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~-~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~-g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++........... ....|+..|+|||.+.+..++.++||||||++ |++++ |..||..      .....
T Consensus       149 ~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~------~~~~~  222 (273)
T d1u46a_         149 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQ  222 (273)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT------CCHHH
T ss_pred             ceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCC------cCHHH
Confidence            5899999999876444333222 23467788999999999889999999999987 89997 7877632      22222


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ............         +.+.....++.+|+.+||+.||++|||+.||++.|.+.
T Consensus       223 ~~~~i~~~~~~~---------~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         223 ILHKIDKEGERL---------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHTSCCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCC---------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            222222211111         11112224688999999999999999999999998764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.79  E-value=5.8e-20  Score=138.13  Aligned_cols=118  Identities=19%  Similarity=0.156  Sum_probs=82.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   ......||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       164 ~vkL~DFG~a~~~~~~~---~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~  234 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE------NDDETL  234 (350)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             eEEEeecchheeccccc---ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCC------CHHHHH
Confidence            58999999998754322   2234689999999999999999999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .... .... .....     .......++.+|+.+||..||++|||+.|+++|-.
T Consensus       235 ~~i~-~~~~-~~~~~-----~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~  282 (350)
T d1koaa2         235 RNVK-SCDW-NMDDS-----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW  282 (350)
T ss_dssp             HHHH-HTCC-CSCCG-----GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTT
T ss_pred             HHHH-hCCC-CCCcc-----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            1111 1111 01111     01112246788999999999999999999999843

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.5e-20  Score=137.82  Aligned_cols=118  Identities=20%  Similarity=0.274  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccc-----cCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAM-----EGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~-----~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      ++||+|||+++....  .........||+.|+|||++.     ...|+.++||||+||+ +++++|..||...   ....
T Consensus       148 ~~Kl~DFG~a~~~~~--~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~---~~~~  222 (288)
T d2jfla1         148 DIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL---NPMR  222 (288)
T ss_dssp             CEEECCCTTCEECHH--HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS---CGGG
T ss_pred             CEEEEechhhhccCC--CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC---CHHH
Confidence            689999999975421  112233468999999999984     4557889999999987 8999999987432   1111


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ...   ... .........       +.....++.+|+.+||+.||++|||+.|+++|-.
T Consensus       223 ~~~---~i~-~~~~~~~~~-------~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~  271 (288)
T d2jfla1         223 VLL---KIA-KSEPPTLAQ-------PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF  271 (288)
T ss_dssp             HHH---HHH-HSCCCCCSS-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred             HHH---HHH-cCCCCCCCc-------cccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            111   111 111111111       1122346889999999999999999999998854

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.9e-21  Score=142.48  Aligned_cols=120  Identities=27%  Similarity=0.297  Sum_probs=83.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++...............|+..|+|||.+.+..|+.++||||||++ |+++++ ..|+..      ..... 
T Consensus       173 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~------~~~~~-  245 (299)
T d1fgka_         173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEE-  245 (299)
T ss_dssp             CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT------CCHHH-
T ss_pred             CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC------CCHHH-
Confidence            579999999986644333333344578889999999999999999999999987 899984 555421      11111 


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .......+.....         +......+.+|+.+||+.||.+|||+.||++.|+++
T Consensus       246 ~~~~i~~~~~~~~---------p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         246 LFKLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             HHHHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCC---------CccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            1122222211111         111224688999999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.8e-21  Score=139.97  Aligned_cols=115  Identities=26%  Similarity=0.235  Sum_probs=75.0

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhc-CCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSG-KRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g-~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....     .....++..|+|||++.+..++.++||||||++ |+++++ ..|+..   .....+...
T Consensus       141 ~~kl~dfg~s~~~~~~-----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~---~~~~~~~~~  212 (262)
T d1byga_         141 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR---IPLKDVVPR  212 (262)
T ss_dssp             CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT---SCGGGHHHH
T ss_pred             CEeecccccceecCCC-----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCC---CCHHHHHHH
Confidence            5799999999864321     123467889999999998899999999999987 899984 544421   122222221


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      +    .....         ...+.....++.+|+.+||+.||++|||+.+|+++|+++
T Consensus       213 i----~~~~~---------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         213 V----EKGYK---------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             H----TTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H----HcCCC---------CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            1    11111         111222234688999999999999999999999999875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=1e-19  Score=133.98  Aligned_cols=127  Identities=14%  Similarity=0.082  Sum_probs=82.9

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........     .......||+.|+|||.+.+..++.++||||+||+ +++++|..||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~  223 (299)
T d1ckia_         144 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  223 (299)
T ss_dssp             CEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred             eeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH
Confidence            5899999999876433221     12234679999999999999889999999999987 89999999985433222221


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      .............     .+.+...    ...++.+|+..||+.+|++||++.++.+.|++.
T Consensus       224 ~~~~~~~~~~~~~-----~~~~~~~----~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         224 KYERISEKKMSTP-----IEVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             -HHHHHHHHHHSC-----HHHHTTT----SCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHhhcccCCCC-----hhHhccC----CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            1111111100000     0111111    123688899999999999999999887766643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.3e-20  Score=138.11  Aligned_cols=121  Identities=15%  Similarity=0.097  Sum_probs=81.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++.......   ....+|++.|+|||++.+..|+.++||||+||+ +++++|+.||......   ......
T Consensus       152 ~~Kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~---~~~~~~  225 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---AISPGM  225 (335)
T ss_dssp             CEEECCCTTCEECCCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------
T ss_pred             cccccccceeeeccCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH---HHHHHH
Confidence            489999999986543222   234589999999999999999999999999987 8999999998432111   111000


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .......      ..............++.+|+.+||+.||++|||+.|++.|-
T Consensus       226 ~~~i~~~------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp  273 (335)
T d2ozaa1         226 KTRIRMG------QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  273 (335)
T ss_dssp             --CCCSC------SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSH
T ss_pred             HHHHhcC------CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCH
Confidence            0000000      00011111122345688999999999999999999999984

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.1e-21  Score=141.08  Aligned_cols=122  Identities=25%  Similarity=0.357  Sum_probs=84.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++...............|++.|+|||.+....++.++|||||||+ |++++++.|+....  ......   
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~--~~~~~~---  257 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--PVDSKF---  257 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CSSHHH---
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC--CHHHHH---
Confidence            579999999987654444344445688999999999998889999999999987 89998666643211  111111   


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ......+.     .+    ..+......+.+|+.+||+.||++|||+.||++.|+++
T Consensus       258 ~~~i~~~~-----~~----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         258 YKMIKEGF-----RM----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHHHHHTC-----CC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhcCC-----CC----CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            11111111     11    11111224688999999999999999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=8.5e-20  Score=135.04  Aligned_cols=113  Identities=26%  Similarity=0.320  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc---CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME---GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~---~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      ++||+|||+++....      .....||+.|+|||++.+   ..|+.++||||+||+ +++++|..||...      ...
T Consensus       153 ~~Kl~DFG~a~~~~~------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~------~~~  220 (309)
T d1u5ra_         153 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAM  220 (309)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHH
T ss_pred             CEEEeecccccccCC------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC------CHH
Confidence            589999999975421      234579999999999864   458889999999987 8999999987421      111


Q ss_pred             HHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           78 TYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........ .........        ....++.+|+.+||+.||++|||+.||++|-.
T Consensus       221 ~~~~~i~~-~~~~~~~~~--------~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~  269 (309)
T d1u5ra_         221 SALYHIAQ-NESPALQSG--------HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  269 (309)
T ss_dssp             HHHHHHHH-SCCCCCSCT--------TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred             HHHHHHHh-CCCCCCCCC--------CCCHHHHHHHHHHCcCChhHCcCHHHHHhCHH
Confidence            11122211 111111111        12246889999999999999999999998743

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.8e-19  Score=132.69  Aligned_cols=130  Identities=18%  Similarity=0.171  Sum_probs=81.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....  .......+||+.|+|||++... .|+.++||||+||+ +++++|..||...   ........
T Consensus       138 ~~KL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~---~~~~~l~~  212 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD---SDLDQLTR  212 (299)
T ss_dssp             CEEECCCGGGSTTTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHH
T ss_pred             ccccccCccccccCCC--cccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCC---CHHHHHHH
Confidence            5799999999754322  1222345789999999998754 57899999999987 8999998876432   11111111


Q ss_pred             HHHHHhcCCcccccCc-------ccc--cCCc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALELMDP-------VLK--QSCV-----GAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~-------~~~--~~~~-----~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ............+.+.       ...  ...+     .....++.+|+.+||+.||++|||+.|+++|-.-
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f  283 (299)
T d1ua2a_         213 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF  283 (299)
T ss_dssp             HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhh
Confidence            1111111100000000       000  0001     1123468899999999999999999999998554

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-19  Score=134.01  Aligned_cols=128  Identities=22%  Similarity=0.181  Sum_probs=82.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+||+|||+++...   .........||+.|+|||++.+..|+.++||||+||+ +++++|..||....   ........
T Consensus       154 ~~kl~dfg~~~~~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i  227 (305)
T d1blxa_         154 QIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS---DVDQLGKI  227 (305)
T ss_dssp             CEEECSCCSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHH
T ss_pred             Ceeecchhhhhhhc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC---HHHHHHHH
Confidence            57999999987542   2223345689999999999999999999999999987 89999999974321   11111111


Q ss_pred             HHHHhcCCcccccC----------cc---cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           81 WKLWCEGEALELMD----------PV---LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~----------~~---~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ...........+..          ..   ............+.+|+.+||+.||++|||+.|+++|-.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpf  295 (305)
T d1blxa_         228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY  295 (305)
T ss_dssp             HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence            11111100000000          00   000111122346788999999999999999999999854

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.76  E-value=1.4e-19  Score=136.14  Aligned_cols=117  Identities=18%  Similarity=0.176  Sum_probs=81.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   ......|++.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       167 ~vkL~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~~  237 (352)
T d1koba_         167 SVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLETL  237 (352)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHH
T ss_pred             eEEEeecccceecCCCC---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCC------CHHHHH
Confidence            58999999998764322   2234578999999999999999999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ..... ... ....     ........++.+|+.+||+.||++|||+.|+++|-
T Consensus       238 ~~i~~-~~~-~~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp  284 (352)
T d1koba_         238 QNVKR-CDW-EFDE-----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP  284 (352)
T ss_dssp             HHHHH-CCC-CCCS-----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred             HHHHh-CCC-CCCc-----ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            11111 111 1111     11112234688999999999999999999999983

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.6e-19  Score=132.71  Aligned_cols=119  Identities=18%  Similarity=0.145  Sum_probs=81.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++......   ......|++.|+|||++.+..++.++||||+||+ +++++|..||...      ......
T Consensus       155 ~vkl~DfG~a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~~~~~  225 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETL  225 (293)
T ss_dssp             CEEECCCTTCEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             ceEecchhhhhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC------CHHHHH
Confidence            48999999998753222   2234578999999999998889999999999987 8999999987421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      . ....... .. ....    .......+.+|+.+||+.||++|||+.|+++|-.-
T Consensus       226 ~-~i~~~~~-~~-~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~  274 (293)
T d1jksa_         226 A-NVSAVNY-EF-EDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI  274 (293)
T ss_dssp             H-HHHTTCC-CC-CHHH----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             H-HHHhcCC-CC-Cchh----cCCCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            1 1111111 00 0101    11123467889999999999999999999998543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.9e-19  Score=131.88  Aligned_cols=115  Identities=20%  Similarity=0.195  Sum_probs=81.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  .......+||+.|+|||++.+..|+.++|+||+||+ +++++|..||...      ......
T Consensus       143 ~vkl~DFG~a~~~~~~--~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~------~~~~~~  214 (337)
T d1o6la_         143 HIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLF  214 (337)
T ss_dssp             CEEECCCTTCBCSCCT--TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEEeecccccccccC--CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc------CHHHHH
Confidence            6899999999864322  222345689999999999999999999999999987 8999999887431      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~  135 (181)
                       ........ .++         .....++.+|+.+||+.||++|++     +.|+++|-.
T Consensus       215 -~~i~~~~~-~~p---------~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~  263 (337)
T d1o6la_         215 -ELILMEEI-RFP---------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             -HHHHHCCC-CCC---------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             -HHHhcCCC-CCC---------ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcc
Confidence             11111111 111         112346788999999999999994     899999854

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=8.7e-19  Score=129.95  Aligned_cols=112  Identities=23%  Similarity=0.240  Sum_probs=80.6

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....     ....+||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       142 ~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~------~~~~~~  210 (316)
T d1fota_         142 HIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS------NTMKTY  210 (316)
T ss_dssp             CEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHH
T ss_pred             CEEEecCccceEeccc-----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCc------CHHHHH
Confidence            6899999999875321     234689999999999999899999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      .... .... .. .+        ....++.+++.+||..||.+|+     |+.++++|-.
T Consensus       211 ~~i~-~~~~-~~-p~--------~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~  259 (316)
T d1fota_         211 EKIL-NAEL-RF-PP--------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW  259 (316)
T ss_dssp             HHHH-HCCC-CC-CT--------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             HHHH-cCCC-CC-CC--------CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcc
Confidence            1111 1111 11 11        1123578899999999999996     9999998843

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=1.7e-18  Score=130.01  Aligned_cols=112  Identities=20%  Similarity=0.180  Sum_probs=80.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....     .....||+.|+|||++.+..++.++||||+||+ +++++|..||...      ......
T Consensus       179 ~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~------~~~~~~  247 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD------QPIQIY  247 (350)
T ss_dssp             CEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             CEEeeeceeeeecccc-----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCc------CHHHHH
Confidence            5899999999875321     234579999999999999999999999999987 8999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      .. ...... ...         .....++.+++.+||..||.+|+     |+.+|++|-.
T Consensus       248 ~~-i~~~~~-~~p---------~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~  296 (350)
T d1rdqe_         248 EK-IVSGKV-RFP---------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             HH-HHHCCC-CCC---------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             HH-HhcCCC-CCC---------ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCcc
Confidence            11 111111 111         11223688999999999999994     9999998854

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-19  Score=131.42  Aligned_cols=107  Identities=20%  Similarity=0.298  Sum_probs=77.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCcc-CcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVF-SIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~-~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++....    .......||+.|+|||++.+..+ +.++||||+||+ +++++|+.||....          
T Consensus       149 ~vkl~DFG~a~~~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----------  214 (273)
T d1xwsa_         149 ELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------  214 (273)
T ss_dssp             EEEECCCTTCEECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------
T ss_pred             eEEECccccceeccc----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----------
Confidence            579999999986432    12334689999999999987765 466899999987 89999999974210          


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                         .......  .+.+    ..    ..++.+|+.+||+.||++|||+.|+++|-.
T Consensus       215 ---~i~~~~~--~~~~----~~----s~~~~~li~~~L~~dp~~R~s~~eil~hp~  257 (273)
T d1xwsa_         215 ---EIIRGQV--FFRQ----RV----SSECQHLIRWCLALRPSDRPTFEEIQNHPW  257 (273)
T ss_dssp             ---HHHHCCC--CCSS----CC----CHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             ---HHhhccc--CCCC----CC----CHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence               0111111  1111    11    236888999999999999999999999854

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=1.7e-19  Score=136.21  Aligned_cols=116  Identities=23%  Similarity=0.247  Sum_probs=79.9

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....    .....+||+.|+|||++.. ..|+.++||||+||+ +++++|..||.....   ......
T Consensus       145 ~iKl~DFGla~~~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---~~~~~~  217 (364)
T d1omwa3         145 HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT---KDKHEI  217 (364)
T ss_dssp             CEEECCCTTCEECSSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS---SCHHHH
T ss_pred             cEEEeeeceeeecCCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Confidence            5899999999865332    2234579999999999864 568999999999987 899999999753221   122111


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhh
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPS-----MSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt-----~~evl~~L~  135 (181)
                      . ..... ..     .....    ....++.+|+.+||+.||++|||     +.|+++|-.
T Consensus       218 ~-~~~~~-~~-----~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~  267 (364)
T d1omwa3         218 D-RMTLT-MA-----VELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF  267 (364)
T ss_dssp             H-HHSSS-CC-----CCCCS----SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGG
T ss_pred             H-Hhccc-CC-----CCCCC----CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCcc
Confidence            1 11100 00     11111    12246889999999999999999     799998854

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.73  E-value=1.6e-18  Score=127.31  Aligned_cols=128  Identities=12%  Similarity=0.071  Sum_probs=84.9

Q ss_pred             CceeeceecceeecCCCCc-----ccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcc
Q 041917            2 NPKISDFGMARIFGGNQNE-----ANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHS   75 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~-----~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~   75 (181)
                      .+||+|||+++........     .......||+.|+|||.+.+..++.++||||+|++ +++++|..||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            4799999999876432211     12234689999999999999889999999999987 89999999985432222211


Q ss_pred             hHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcCC
Q 041917           76 LLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLASDT  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~~  138 (181)
                      ................     +....+    .++.+++..||+.+|++||++..+.+.|+++.
T Consensus       224 ~~~~i~~~~~~~~~~~-----l~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         224 KYERIGEKKQSTPLRE-----LCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             HHHHHHHHHHHSCHHH-----HTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCChHH-----hcCCCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            1111111111111111     111112    35888999999999999999998888776543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.8e-19  Score=130.76  Aligned_cols=114  Identities=22%  Similarity=0.206  Sum_probs=80.1

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....  ........||+.|+|||++.+..|+.++||||+||+ +++++|..||...      ......
T Consensus       141 ~~kl~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~  212 (320)
T d1xjda_         141 HIKIADFGMCKENMLG--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELF  212 (320)
T ss_dssp             CEEECCCTTCBCCCCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHH
T ss_pred             ceeccccchhhhcccc--cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC------CHHHHH
Confidence            5799999999854322  222334589999999999999999999999999987 9999999997421      111111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMS-SVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~-evl~~L  134 (181)
                      .. ...... ..     .    .....++.+|+.+||..||++||++. +|++|-
T Consensus       213 ~~-i~~~~~-~~-----p----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hp  256 (320)
T d1xjda_         213 HS-IRMDNP-FY-----P----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP  256 (320)
T ss_dssp             HH-HHHCCC-CC-----C----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSG
T ss_pred             HH-HHcCCC-CC-----C----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCc
Confidence            11 111111 11     1    11224688999999999999999995 788764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.9e-18  Score=125.44  Aligned_cols=131  Identities=21%  Similarity=0.229  Sum_probs=81.2

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||+++.....  ........|++.|+|||.+.... ++.++||||+||+ +++++|+.||...   ........
T Consensus       140 ~~kl~DFG~a~~~~~~--~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~---~~~~~~~~  214 (298)
T d1gz8a_         140 AIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD---SEIDQLFR  214 (298)
T ss_dssp             CEEECSTTHHHHHCCC--SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS---SHHHHHHH
T ss_pred             cceeccCCcceeccCC--cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCC---CHHHHHHH
Confidence            5799999999865322  22233457899999999887766 4678999999987 8999999997432   11111111


Q ss_pred             HHHHHhcCCcc--ccc------Cccc----ccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH--hhcC
Q 041917           80 TWKLWCEGEAL--ELM------DPVL----KQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVM--LASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~--~~~------~~~~----~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~--L~~~  137 (181)
                      ...........  ...      ....    ...   .......++.+|+.+||..||++|||+.|+++|  ++++
T Consensus       215 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         215 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence            11111110000  000      0000    000   001123468899999999999999999999998  5444

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.70  E-value=5.4e-18  Score=123.43  Aligned_cols=123  Identities=22%  Similarity=0.297  Sum_probs=76.4

Q ss_pred             CceeeceecceeecCCC-CcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQ-NEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~-~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ..+|+|||.++...... ........+||+.|+|||++.+..++.++||||+||+ +++++|..||...      .....
T Consensus       149 ~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~  222 (277)
T d1o6ya_         149 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD------SPVSV  222 (277)
T ss_dssp             CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHH
T ss_pred             cceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc------CHHHH
Confidence            46899999887543222 1222345689999999999998889999999999987 8999999997421      11222


Q ss_pred             HHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhcC
Q 041917           80 TWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-SMSSVVVMLASD  137 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-t~~evl~~L~~~  137 (181)
                      ............   ......    ...++.+++.+||+.||.+|| |+.++++.|.++
T Consensus       223 ~~~~~~~~~~~~---~~~~~~----~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         223 AYQHVREDPIPP---SARHEG----LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHHCCCCCG---GGTSSS----CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCC---chhccC----CCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            222222211110   011111    123688899999999999999 899999888764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.1e-18  Score=127.95  Aligned_cols=133  Identities=19%  Similarity=0.085  Sum_probs=81.4

Q ss_pred             CceeeceecceeecCCCC--cccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchH
Q 041917            2 NPKISDFGMARIFGGNQN--EANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLL   77 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~--~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~   77 (181)
                      .+||+|||+++.......  .......+||+.|+|||++.+. .|+.++||||+||+ +++++|+.||...   ......
T Consensus       155 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~---~~~~~~  231 (318)
T d3blha1         155 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQL  231 (318)
T ss_dssp             CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS---SHHHHH
T ss_pred             cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCC---CHHHHH
Confidence            579999999976543221  1122345789999999998754 58899999999987 8999999887421   111111


Q ss_pred             HHHHHHHhcCC--cccccC---------cccccCCcH-------HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhcC
Q 041917           78 TYTWKLWCEGE--ALELMD---------PVLKQSCVG-------AELLKYIHIGLLCVQEDPARRPSMSSVVVMLASD  137 (181)
Q Consensus        78 ~~~~~~~~~~~--~~~~~~---------~~~~~~~~~-------~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~~  137 (181)
                      ...........  ......         .........       .....+.+|+.+||+.||++|||+.|+++|-.-.
T Consensus       232 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~  309 (318)
T d3blha1         232 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  309 (318)
T ss_dssp             HHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGS
T ss_pred             HHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhc
Confidence            11111111100  000000         000000011       1123567899999999999999999999997654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.3e-18  Score=128.49  Aligned_cols=127  Identities=16%  Similarity=0.095  Sum_probs=79.8

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......   ......|+..|+|||.+.+ ..++.++||||+||+ +++++|..||.....   ......
T Consensus       161 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~---~~~l~~  234 (350)
T d1q5ka_         161 VLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG---VDQLVE  234 (350)
T ss_dssp             CEEECCCTTCEECCTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSH---HHHHHH
T ss_pred             ceeEecccchhhccCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCH---HHHHHH
Confidence            57999999998653322   2234578999999998765 568899999999987 899999988743211   111111


Q ss_pred             HHHHH-----------hcC----CcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           80 TWKLW-----------CEG----EALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        80 ~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      .....           ...    ....................++.+|+.+||..||++|||+.|+++|-
T Consensus       235 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  304 (350)
T d1q5ka_         235 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS  304 (350)
T ss_dssp             HHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             HHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            11000           000    00000000000111112334688999999999999999999999884

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5.8e-18  Score=125.76  Aligned_cols=117  Identities=19%  Similarity=0.151  Sum_probs=80.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      ++||+|||+++.....   .......+++.|++||...+..|+.++||||+||+ +++++|..||....      .....
T Consensus       142 ~ikl~DFG~~~~~~~~---~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~------~~~~~  212 (321)
T d1tkia_         142 TIKIIEFGQARQLKPG---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQII  212 (321)
T ss_dssp             CEEECCCTTCEECCTT---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHH
T ss_pred             EEEEcccchhhccccC---CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC------HHHHH
Confidence            5899999999865322   22234578899999999999999999999999987 89999999974321      11111


Q ss_pred             HHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 041917           81 WKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVML  134 (181)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L  134 (181)
                      ..... ... ...... ..    ....++.+|+.+||..||++|||+.|+++|-
T Consensus       213 ~~i~~-~~~-~~~~~~-~~----~~s~~~~~li~~~L~~dp~~R~s~~eil~hp  259 (321)
T d1tkia_         213 ENIMN-AEY-TFDEEA-FK----EISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             HHHHH-TCC-CCCHHH-HT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             HHHHh-CCC-CCChhh-cc----CCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            11111 111 111110 00    1123578999999999999999999999973

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.68  E-value=1.5e-17  Score=121.01  Aligned_cols=118  Identities=18%  Similarity=0.219  Sum_probs=79.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCcccccc------CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCc
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAME------GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGH   74 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~------~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~   74 (181)
                      ++||+|||+++......   ......|+..|++||.+.+      ..++.++||||+||+ +++++|..||...      
T Consensus       148 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~------  218 (277)
T d1phka_         148 NIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR------  218 (277)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------
T ss_pred             CeEEccchheeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCC------
Confidence            57999999998754322   2234578999999998863      346788999999987 8999999997432      


Q ss_pred             chHHHHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           75 SLLTYTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..... .......... ...+     .......++.+|+.+||+.||++|||+.||++|-+
T Consensus       219 ~~~~~-~~~i~~~~~~-~~~~-----~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~  272 (277)
T d1phka_         219 KQMLM-LRMIMSGNYQ-FGSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF  272 (277)
T ss_dssp             SHHHH-HHHHHHTCCC-CCTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             CHHHH-HHHHHhCCCC-CCCc-----ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence            11111 1111222111 1111     11122346889999999999999999999998843

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.4e-17  Score=121.15  Aligned_cols=125  Identities=21%  Similarity=0.147  Sum_probs=78.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccC-ccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEG-VFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~-~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++.....     .....|+..|+|||++.+. .++.++||||+||+ +++++|..|+....   .......
T Consensus       159 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~---~~~~~~~  230 (346)
T d1cm8a_         159 ELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD---HLDQLKE  230 (346)
T ss_dssp             CEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             ccccccccceeccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC---hHHHHHH
Confidence            5799999999865321     2345789999999998764 46789999999987 89999998874321   1111110


Q ss_pred             HHHHHhcC------------------CcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEG------------------EALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ........                  .........+. .........+.+|+.+||..||++|||+.|+++|-.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~  303 (346)
T d1cm8a_         231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  303 (346)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HHhccCCCcHHHHhhhcchhhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence            00000000                  00000000000 111122346789999999999999999999999943

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=3e-16  Score=117.94  Aligned_cols=129  Identities=19%  Similarity=0.133  Sum_probs=81.6

Q ss_pred             ceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHHH
Q 041917            3 PKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYTW   81 (181)
Q Consensus         3 ~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~~   81 (181)
                      +|++|||.+.....     .....+|+..|+|||++....++.++|+||+||+ +++++|+.||................
T Consensus       171 ~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         171 IKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence            78999999875421     2234578999999999998889999999999987 89999999875332221111111100


Q ss_pred             ---HHHhc------------------CCcccccCcc----------cccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 041917           82 ---KLWCE------------------GEALELMDPV----------LKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSV  130 (181)
Q Consensus        82 ---~~~~~------------------~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev  130 (181)
                         .....                  ......+...          ...........++.+|+.+||.+||++|||+.|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence               00000                  0000000000          0112334566789999999999999999999999


Q ss_pred             HHHhhc
Q 041917          131 VVMLAS  136 (181)
Q Consensus       131 l~~L~~  136 (181)
                      ++|-.-
T Consensus       326 L~Hp~f  331 (362)
T d1q8ya_         326 VNHPWL  331 (362)
T ss_dssp             HTCGGG
T ss_pred             hcCccc
Confidence            999543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.65  E-value=1.7e-17  Score=121.19  Aligned_cols=129  Identities=22%  Similarity=0.242  Sum_probs=76.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||.+......  ........|++.|++||.+.+.. ++.++||||+||+ +++++|+.||...   ........
T Consensus       138 ~~kl~DfG~a~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~---~~~~~~~~  212 (286)
T d1ob3a_         138 ELKIADFGLARAFGIP--VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV---SEADQLMR  212 (286)
T ss_dssp             CEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS---SHHHHHHH
T ss_pred             CEEecccccceecccC--ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCC---CHHHHHHH
Confidence            5799999999765322  12223346888999999987644 6789999999987 8999999987421   11111111


Q ss_pred             HHHHHhcCCccccc---------------CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           80 TWKLWCEGEALELM---------------DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        80 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      ..............               .+.............+.+|+.+||+.||++|||+.|+++|-.
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~  283 (286)
T d1ob3a_         213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY  283 (286)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            11111111000000               000000111122346889999999999999999999998743

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.63  E-value=2.9e-17  Score=122.16  Aligned_cols=130  Identities=12%  Similarity=0.094  Sum_probs=80.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+||+|||+++......   ......+|..|+|||.+.+.. ++.++|+||+||+ +++++|+.|+......  ......
T Consensus       168 ~vkl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~--~~~~~~  242 (328)
T d3bqca1         168 KLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVR  242 (328)
T ss_dssp             EEEECCGGGCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHH
T ss_pred             eeeecccccceeccCCC---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh--HHHHHH
Confidence            37999999998653322   223457899999999987654 7889999999987 8999999887432111  100000


Q ss_pred             HHHH---------HhcCCc--c----ccc--------CcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKL---------WCEGEA--L----ELM--------DPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~---------~~~~~~--~----~~~--------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ....         ......  .    ...        ..............++.+|+.+||..||++|||+.|+++|-.-
T Consensus       243 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F  322 (328)
T d3bqca1         243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF  322 (328)
T ss_dssp             HHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            0000         000000  0    000        0000111112223468899999999999999999999998643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.4e-17  Score=121.26  Aligned_cols=129  Identities=22%  Similarity=0.117  Sum_probs=75.4

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTYT   80 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~~   80 (181)
                      .+|++|||+++....   .......+||..|+|||++.+..++.++||||+||+ +++++|+.||....   ........
T Consensus       157 ~~kl~df~~~~~~~~---~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~---~~~~~~~i  230 (355)
T d2b1pa1         157 TLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD---YIDQWNKV  230 (355)
T ss_dssp             CEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHH
T ss_pred             ceeeechhhhhcccc---ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCC---HHHHHHHH
Confidence            468999999875432   222234578999999999999899999999999987 89999998874221   00000000


Q ss_pred             HHHH------------------hcCCc-------ccccCccc-c--cCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 041917           81 WKLW------------------CEGEA-------LELMDPVL-K--QSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVV  132 (181)
Q Consensus        81 ~~~~------------------~~~~~-------~~~~~~~~-~--~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~  132 (181)
                      ....                  .....       ........ .  .........++.+|+.+||..||++|||+.||++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0000                  00000       00000000 0  1112334567899999999999999999999999


Q ss_pred             Hhhc
Q 041917          133 MLAS  136 (181)
Q Consensus       133 ~L~~  136 (181)
                      |-.-
T Consensus       311 Hpw~  314 (355)
T d2b1pa1         311 HPYI  314 (355)
T ss_dssp             STTT
T ss_pred             Cccc
Confidence            9543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.2e-17  Score=122.17  Aligned_cols=131  Identities=18%  Similarity=0.157  Sum_probs=78.8

Q ss_pred             CceeeceecceeecCCCC-cccccccccCCCccCcccccc-CccCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQN-EANTNRVVGTYGYMAPEYAME-GVFSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~-~~~~~~~~g~~~~~aPe~~~~-~~~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      ++||+|||+++....... .......+|++.|+|||++.. ..++.++||||+||+ +++++|..||.....   .....
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~---~~~~~  223 (345)
T d1pmea_         147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY---LDQLN  223 (345)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHH
T ss_pred             CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCH---HHHHH
Confidence            579999999986532211 112234578999999999854 457888999999987 899999988743211   11111


Q ss_pred             HHHHHHhcCCccc--------------ccCcccccC---CcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 041917           79 YTWKLWCEGEALE--------------LMDPVLKQS---CVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~--------------~~~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~  135 (181)
                      .............              .........   .......++.+|+.+||..||++|||+.|+++|-.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf  297 (345)
T d1pmea_         224 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  297 (345)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence            1111000000000              000000000   00011235789999999999999999999999843

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8e-17  Score=119.57  Aligned_cols=120  Identities=21%  Similarity=0.271  Sum_probs=79.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc--cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV--FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLT   78 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~--~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~   78 (181)
                      .+||+|||+++...... ........|++.|++||.+.+..  ++.++||||+||+ +++++|..||.......  ....
T Consensus       167 ~vkL~DFG~a~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~--~~~~  243 (322)
T d1vzoa_         167 HVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAE  243 (322)
T ss_dssp             CEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHH
T ss_pred             CEEEeeccchhhhcccc-cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence            58999999998653222 22234467899999999987543  6678999999987 89999999975332221  1111


Q ss_pred             HHHHHHhcCCcccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhh
Q 041917           79 YTWKLWCEGEALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRP-----SMSSVVVMLA  135 (181)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~evl~~L~  135 (181)
                      ....... ... .         .+.....++.+|+.+||..||++||     |+.|+++|-.
T Consensus       244 i~~~~~~-~~~-~---------~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpf  294 (322)
T d1vzoa_         244 ISRRILK-SEP-P---------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF  294 (322)
T ss_dssp             HHHHHHH-CCC-C---------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred             HHHhccc-CCC-C---------CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHh
Confidence            1111111 111 1         1112234688999999999999999     5899998744

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.1e-16  Score=115.50  Aligned_cols=131  Identities=20%  Similarity=0.169  Sum_probs=79.7

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      ++||+|||.++.......  ......++..|.+||.+.... ++.++||||+||+ +++++|+.|+..  ..........
T Consensus       139 ~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~--~~~~~~~~~~  214 (292)
T d1unla_         139 ELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP--GNDVDDQLKR  214 (292)
T ss_dssp             CEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC--CSSHHHHHHH
T ss_pred             ceeeeecchhhcccCCCc--cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCC--CCCHHHHHHH
Confidence            579999999987543222  122335677899999887655 6788999999987 899999988632  1111111111


Q ss_pred             HHHHHhcCCccc------ccC---------cccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGEALE------LMD---------PVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~~~~------~~~---------~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      ............      ..+         ..............+.+|+.+||+.||++|||+.||++|-.-
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f  286 (292)
T d1unla_         215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF  286 (292)
T ss_dssp             HHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             HHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhh
Confidence            111111110000      000         000001112223467889999999999999999999998543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-15  Score=112.74  Aligned_cols=126  Identities=18%  Similarity=0.167  Sum_probs=74.5

Q ss_pred             CceeeceecceeecCCCCcccccccccCCCccCccccccCc-cCcccceeehhHH-HHHHhcCCCCCCCcCCCCcchHHH
Q 041917            2 NPKISDFGMARIFGGNQNEANTNRVVGTYGYMAPEYAMEGV-FSIKSDVFSFGVL-LEIVSGKRNSGFYLSKDGHSLLTY   79 (181)
Q Consensus         2 ~~ki~dfgl~~~~~~~~~~~~~~~~~g~~~~~aPe~~~~~~-~~~~~diws~gv~-~~~~~g~~~~~~~~~~~~~~~~~~   79 (181)
                      .+|++|||++....     .......|+..|+|||...+.. ++.++||||+||+ +++++|..||...   ........
T Consensus       159 ~~kl~dfg~a~~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~---~~~~~~~~  230 (348)
T d2gfsa1         159 ELKILDFGLARHTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT---DHIDQLKL  230 (348)
T ss_dssp             CEEECCC----CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS---SHHHHHHH
T ss_pred             cccccccchhcccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCC---CHHHHHHH
Confidence            57999999986532     2223457888999999877654 5788999999987 8999999887432   11111111


Q ss_pred             HHHHHhcCC------------------cccccCcccccCCcHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhc
Q 041917           80 TWKLWCEGE------------------ALELMDPVLKQSCVGAELLKYIHIGLLCVQEDPARRPSMSSVVVMLAS  136 (181)
Q Consensus        80 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~evl~~L~~  136 (181)
                      .........                  ........+. ........++.+|+.+||..||++|||+.|+++|-.-
T Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f  304 (348)
T d2gfsa1         231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF  304 (348)
T ss_dssp             HHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHH-HHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchh-hhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhh
Confidence            111110000                  0000000000 0001123467899999999999999999999998543