Query 041922
Match_columns 523
No_of_seqs 478 out of 4383
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 20:56:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 4.2E-39 1.5E-43 331.5 21.3 285 4-306 16-326 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-38 4E-43 328.3 23.4 314 4-354 49-389 (437)
3 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-38 4.2E-43 317.7 21.7 295 3-358 25-329 (351)
4 2xai_A ASB-9, ankyrin repeat a 100.0 3.5E-37 1.2E-41 294.7 17.3 236 4-353 5-249 (261)
5 3d9h_A CDNA FLJ77766, highly s 100.0 7.9E-37 2.7E-41 296.1 19.8 236 4-352 17-265 (285)
6 1wdy_A 2-5A-dependent ribonucl 100.0 2.7E-36 9.2E-41 291.5 21.0 240 4-307 7-269 (285)
7 3b7b_A Euchromatic histone-lys 100.0 2.8E-35 9.7E-40 276.9 21.3 215 28-354 2-222 (237)
8 1oy3_D Transcription factor in 100.0 8.6E-36 2.9E-40 287.9 18.0 254 4-355 11-271 (282)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 5.2E-36 1.8E-40 285.2 14.9 214 29-353 2-234 (253)
10 3aji_A 26S proteasome non-ATPa 100.0 1.1E-34 3.7E-39 271.8 22.2 210 2-353 6-216 (231)
11 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-35 4.6E-40 294.7 16.6 245 4-307 27-317 (337)
12 4b93_B Ankyrin repeat domain-c 100.0 4E-36 1.4E-40 288.1 11.0 208 3-303 12-230 (269)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 1.7E-35 6E-40 281.5 15.0 211 4-307 12-239 (253)
14 1s70_B 130 kDa myosin-binding 100.0 7.5E-35 2.6E-39 284.0 19.9 225 3-300 41-274 (299)
15 1k1a_A B-cell lymphoma 3-encod 100.0 2E-35 6.8E-40 278.6 15.1 215 4-307 11-232 (241)
16 1k1a_A B-cell lymphoma 3-encod 100.0 6.9E-35 2.3E-39 274.9 18.8 215 31-353 3-227 (241)
17 2dzn_A Probable 26S proteasome 100.0 7.5E-35 2.6E-39 272.3 18.7 213 1-302 1-219 (228)
18 3b7b_A Euchromatic histone-lys 100.0 8.8E-35 3E-39 273.6 18.1 207 4-304 13-223 (237)
19 2xai_A ASB-9, ankyrin repeat a 100.0 7.2E-35 2.5E-39 278.6 17.6 204 36-352 2-209 (261)
20 2fo1_E LIN-12 protein; beta-ba 100.0 2E-36 6.8E-41 304.8 5.8 249 4-307 96-362 (373)
21 1wdy_A 2-5A-dependent ribonucl 100.0 6.6E-35 2.3E-39 281.7 16.0 238 36-353 4-264 (285)
22 3ljn_A Hypothetical protein; a 100.0 6.3E-35 2.2E-39 293.0 15.7 262 4-353 22-300 (364)
23 2dzn_A Probable 26S proteasome 100.0 2E-34 6.7E-39 269.4 17.8 207 37-352 2-218 (228)
24 3utm_A Tankyrase-1; tankyrase, 100.0 3E-34 1E-38 285.8 19.3 235 4-299 60-321 (351)
25 4g8k_A 2-5A-dependent ribonucl 100.0 1.6E-34 5.6E-39 286.8 16.6 240 34-353 22-284 (337)
26 1s70_B 130 kDa myosin-binding 100.0 1E-34 3.5E-39 283.0 14.3 240 8-358 4-281 (299)
27 3d9h_A CDNA FLJ77766, highly s 100.0 6.3E-34 2.2E-38 275.7 18.0 201 4-301 61-265 (285)
28 4b93_B Ankyrin repeat domain-c 100.0 2.8E-34 9.5E-39 275.3 11.9 215 32-353 6-229 (269)
29 3ljn_A Hypothetical protein; a 100.0 5.2E-34 1.8E-38 286.3 14.0 219 25-353 8-255 (364)
30 2fo1_E LIN-12 protein; beta-ba 100.0 9.3E-35 3.2E-39 292.6 7.3 266 4-353 39-357 (373)
31 1ikn_D Protein (I-kappa-B-alph 100.0 2.1E-34 7.2E-39 271.0 6.4 216 32-352 3-229 (236)
32 4gpm_A Engineered protein OR26 100.0 1.7E-32 5.7E-37 243.4 18.2 156 3-275 5-160 (169)
33 2f8y_A Notch homolog 1, transl 100.0 4E-33 1.4E-37 259.7 14.4 200 13-306 2-206 (223)
34 2rfa_A Transient receptor pote 100.0 6.3E-32 2.1E-36 253.2 19.6 206 3-307 4-213 (232)
35 3eu9_A Huntingtin-interacting 100.0 2.6E-32 8.9E-37 256.6 16.3 211 3-307 10-226 (240)
36 3hra_A Ankyrin repeat family p 100.0 1.1E-31 3.8E-36 245.7 17.7 183 2-306 5-193 (201)
37 3kea_A K1L; tropism, ANK repea 100.0 1.6E-32 5.6E-37 265.7 12.2 197 9-305 6-209 (285)
38 1oy3_D Transcription factor in 100.0 6.4E-31 2.2E-35 253.7 18.1 216 30-353 2-236 (282)
39 3eu9_A Huntingtin-interacting 100.0 7E-31 2.4E-35 246.8 17.5 212 31-353 3-221 (240)
40 2etb_A Transient receptor pote 100.0 4.8E-31 1.6E-35 251.2 15.3 200 3-307 3-237 (256)
41 3aji_A 26S proteasome non-ATPa 100.0 1.3E-30 4.4E-35 244.0 17.1 178 4-305 42-219 (231)
42 4gpm_A Engineered protein OR26 100.0 6.2E-31 2.1E-35 233.3 14.1 147 39-307 6-152 (169)
43 1ikn_D Protein (I-kappa-B-alph 100.0 2.1E-32 7.3E-37 257.3 4.6 214 4-302 10-230 (236)
44 3jxi_A Vanilloid receptor-rela 100.0 4.7E-31 1.6E-35 251.8 13.3 202 2-307 5-241 (260)
45 2rfa_A Transient receptor pote 100.0 2.7E-30 9.2E-35 242.1 18.2 187 36-353 2-208 (232)
46 1sw6_A Regulatory protein SWI6 100.0 2.2E-31 7.5E-36 263.0 8.1 176 66-352 121-326 (327)
47 1sw6_A Regulatory protein SWI6 100.0 1.7E-31 5.7E-36 263.8 7.0 193 13-302 107-327 (327)
48 2pnn_A Transient receptor pote 100.0 2.3E-30 7.8E-35 249.0 14.7 203 3-307 14-249 (273)
49 2f8y_A Notch homolog 1, transl 100.0 9.4E-30 3.2E-34 236.8 17.8 186 4-276 27-216 (223)
50 3hra_A Ankyrin repeat family p 100.0 1.8E-29 6.3E-34 230.8 17.9 186 34-353 2-189 (201)
51 3v30_A DNA-binding protein rfx 100.0 1.8E-29 6.3E-34 225.0 16.9 169 3-294 3-171 (172)
52 2rfm_A Putative ankyrin repeat 100.0 9.2E-30 3.1E-34 231.3 13.4 157 29-307 27-183 (192)
53 4hbd_A KN motif and ankyrin re 100.0 2E-30 6.8E-35 249.8 8.4 188 34-307 73-266 (276)
54 2pnn_A Transient receptor pote 100.0 1.3E-29 4.4E-34 243.8 10.5 206 29-353 5-244 (273)
55 2etb_A Transient receptor pote 100.0 3.6E-29 1.2E-33 238.2 13.2 197 36-353 1-232 (256)
56 3v30_A DNA-binding protein rfx 100.0 8.2E-29 2.8E-33 220.8 14.4 150 37-307 2-151 (172)
57 2vge_A RELA-associated inhibit 100.0 5.8E-30 2E-34 239.2 6.6 194 19-353 2-199 (229)
58 3v31_A Ankyrin repeat family A 100.0 1.3E-28 4.6E-33 218.2 14.4 150 36-307 2-151 (167)
59 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.3E-27 4.5E-32 212.3 18.1 82 216-305 79-160 (169)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.2E-28 1.8E-32 213.2 15.2 156 3-275 6-161 (162)
61 3kea_A K1L; tropism, ANK repea 100.0 6.3E-29 2.1E-33 240.5 9.7 200 4-307 33-237 (285)
62 1awc_B Protein (GA binding pro 100.0 3.4E-28 1.1E-32 212.4 12.8 147 37-306 2-148 (153)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.5E-28 1.6E-32 215.4 13.0 155 3-274 15-169 (169)
64 3f6q_A Integrin-linked protein 100.0 1E-27 3.5E-32 215.2 14.8 165 4-291 7-171 (179)
65 3v31_A Ankyrin repeat family A 99.9 2.1E-27 7.1E-32 210.5 16.2 156 3-275 4-159 (167)
66 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.7E-27 9.4E-32 207.2 16.4 153 3-273 3-155 (156)
67 1awc_B Protein (GA binding pro 99.9 4.7E-27 1.6E-31 205.1 16.7 150 3-270 3-152 (153)
68 3jxi_A Vanilloid receptor-rela 99.9 2.2E-28 7.7E-33 233.2 9.0 201 34-353 2-236 (260)
69 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.9E-28 2E-32 212.8 9.9 151 35-307 3-153 (162)
70 2rfm_A Putative ankyrin repeat 99.9 5.6E-27 1.9E-31 212.8 16.0 155 4-275 37-191 (192)
71 2vge_A RELA-associated inhibit 99.9 2.4E-29 8.2E-34 235.0 0.2 180 4-307 23-204 (229)
72 3twr_A Tankyrase-2; ankyrin re 99.9 3.6E-27 1.2E-31 208.6 14.0 92 4-101 10-101 (165)
73 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-27 6.3E-32 208.3 11.5 147 37-306 2-148 (156)
74 3twr_A Tankyrase-2; ankyrin re 99.9 1.7E-27 5.8E-32 210.6 10.8 151 33-305 4-154 (165)
75 4hbd_A KN motif and ankyrin re 99.9 3.5E-27 1.2E-31 227.1 13.7 175 74-353 75-261 (276)
76 3f6q_A Integrin-linked protein 99.9 4.9E-27 1.7E-31 210.7 12.5 150 35-305 3-152 (179)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.1E-27 1.4E-31 221.6 7.5 175 4-303 7-193 (239)
78 1bi7_B P16INK4A, MTS1, multipl 99.9 1.6E-26 5.6E-31 202.4 10.0 145 31-298 6-151 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 9.8E-27 3.3E-31 219.0 9.0 188 34-353 2-192 (239)
80 3t8k_A Uncharacterized protein 99.9 1.5E-26 5.1E-31 208.5 7.8 167 3-289 7-185 (186)
81 1d9s_A Cyclin-dependent kinase 99.9 1E-25 3.6E-30 192.4 11.8 132 28-275 3-135 (136)
82 3t8k_A Uncharacterized protein 99.9 1.3E-25 4.3E-30 202.4 8.4 146 37-306 6-169 (186)
83 2aja_A Ankyrin repeat family p 99.9 8.3E-26 2.8E-30 225.6 2.4 193 7-307 70-270 (376)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 3.2E-24 1.1E-28 183.2 11.7 127 33-274 10-136 (136)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-23 4.4E-28 176.3 14.4 125 36-275 1-125 (126)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 4.6E-24 1.6E-28 186.8 10.1 106 216-349 44-151 (156)
87 1d9s_A Cyclin-dependent kinase 99.9 2.6E-24 8.9E-29 183.7 8.2 123 66-306 3-126 (136)
88 3c5r_A BARD-1, BRCA1-associate 99.9 7.3E-24 2.5E-28 181.1 7.1 129 32-275 5-133 (137)
89 2b0o_E UPLC1; arfgap, structur 99.9 3.7E-23 1.3E-27 201.0 12.7 140 37-304 151-299 (301)
90 3c5r_A BARD-1, BRCA1-associate 99.9 5.3E-23 1.8E-27 175.7 9.7 85 213-305 39-123 (137)
91 3ui2_A Signal recognition part 99.9 4.3E-24 1.5E-28 201.5 2.5 83 213-303 73-156 (244)
92 2jab_A H10-2-G3; HER2, darpin, 99.9 6.3E-23 2.2E-27 175.1 9.3 86 213-306 43-128 (136)
93 3ehr_A Osteoclast-stimulating 99.9 2.8E-23 9.4E-28 193.0 7.0 129 32-275 68-197 (222)
94 3deo_A Signal recognition part 99.9 2.2E-22 7.4E-27 181.0 11.3 83 213-303 72-155 (183)
95 2aja_A Ankyrin repeat family p 99.9 9.2E-24 3.1E-28 210.8 2.3 168 36-307 64-241 (376)
96 3aaa_C Myotrophin, protein V-1 99.9 3.3E-22 1.1E-26 167.3 10.9 81 213-301 36-116 (123)
97 3aaa_C Myotrophin, protein V-1 99.9 2E-22 6.7E-27 168.7 8.7 117 34-265 4-120 (123)
98 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.7E-22 1.6E-26 166.7 10.4 86 213-306 31-116 (126)
99 2b0o_E UPLC1; arfgap, structur 99.9 7.3E-22 2.5E-26 191.9 11.6 139 3-264 152-299 (301)
100 3ehr_A Osteoclast-stimulating 99.9 3.3E-22 1.1E-26 185.7 7.7 159 33-307 21-189 (222)
101 3deo_A Signal recognition part 99.8 6.8E-21 2.3E-25 171.2 12.5 116 33-264 40-156 (183)
102 1dcq_A PYK2-associated protein 99.8 4.6E-21 1.6E-25 184.1 11.3 127 39-275 132-262 (278)
103 3jue_A Arfgap with coiled-coil 99.8 7.3E-21 2.5E-25 189.1 11.6 150 35-303 197-349 (368)
104 3ui2_A Signal recognition part 99.8 5.4E-21 1.9E-25 180.2 10.1 55 203-275 126-184 (244)
105 3lvq_E ARF-GAP with SH3 domain 99.8 2.4E-20 8.1E-25 194.4 13.6 137 36-300 131-276 (497)
106 2l6b_A NR1C; ankyrin, consensu 99.8 2.7E-20 9.4E-25 153.6 7.8 75 213-295 38-112 (115)
107 3jue_A Arfgap with coiled-coil 99.8 3E-20 1E-24 184.7 9.4 114 215-352 233-347 (368)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9.4E-20 3.2E-24 144.2 10.4 62 213-275 31-92 (93)
109 1dcq_A PYK2-associated protein 99.8 6.9E-20 2.4E-24 175.9 11.5 93 4-101 132-231 (278)
110 3lvq_E ARF-GAP with SH3 domain 99.8 2.1E-19 7.1E-24 187.3 14.1 92 3-101 133-233 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.8 2.4E-19 8.4E-24 147.8 7.4 109 32-255 4-112 (115)
112 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.4E-19 8.4E-24 141.8 6.9 83 216-306 1-83 (93)
113 2zgd_A 3 repeat synthetic anky 99.7 1.3E-17 4.4E-22 136.3 6.3 88 211-306 18-105 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 5.8E-17 2E-21 132.4 9.4 56 214-270 54-109 (110)
115 3rko_J NADH-quinone oxidoreduc 34.5 92 0.0032 26.5 6.6 19 457-475 56-74 (184)
116 1gp8_A Protein (scaffolding pr 29.8 37 0.0013 20.5 2.2 18 5-22 16-33 (40)
117 4ev6_A Magnesium transport pro 25.9 70 0.0024 30.3 4.9 21 455-475 281-301 (339)
118 2iub_A CORA, divalent cation t 24.3 54 0.0018 31.4 3.8 21 455-475 305-325 (363)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.2e-39 Score=331.55 Aligned_cols=285 Identities=16% Similarity=0.139 Sum_probs=197.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.|+++ +.+.+..+..|.||||+|+..|+.+++++|++.+. +++.+|.+|+||||+|+
T Consensus 16 t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 88 (437)
T 1n11_A 16 TPLHVASFMGHLPIVKNLLQR--GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA-----KVNAKAKDDQTPLHCAA 88 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTC-----CSSCCCTTSCCHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-----CCCCCCCCCCCHHHHHH
Confidence 578999999999999999988 66777888899999999999999999999998864 48888999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCc-eeEeccCCccc-chhhhhhcCCccCCccCCCCCCCccccCCCCCCCC-c-cC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLA-NCSWSSGNLED-KEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDT-F-SV 159 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l~~~~~~~~-v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~-~-~~ 159 (523)
+.|+.+++++|+++|++++..+..+.+ ++.++..++.+ ++.|+++ +.+.+..+..|.||||.|+...... . .+
T Consensus 89 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 165 (437)
T 1n11_A 89 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK---EASQACMTKKGFTPLHVAAKYGKVRVAELL 165 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC---CCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999988877777766 77777666665 3677766 6667777777778887666422221 1 22
Q ss_pred CCCCCCC----Cccccchhhh---HHHHHHHHhhccCCC-------cchhhhh----HHHHHHHHHHhc----ccccCCC
Q 041922 160 PETPPVL----ENDQIFQSRN---ICLESAVAVHNKDGN-------ARDETAT----AAVQELKFMKKK----DQQSGRK 217 (523)
Q Consensus 160 l~~~~~~----~~~~~~~~~~---~~~~~~~~l~~~~~~-------~~~~~~~----~~~~~v~~Ll~~----~~~~~~g 217 (523)
++.+.+. ..+..|.++. ...+.++.+++.... +.++.|. +..++++.|++. +..+..|
T Consensus 166 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 245 (437)
T 1n11_A 166 LERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG 245 (437)
T ss_dssp HHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred HhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 3333222 1223333332 233444444443221 1223332 234567777665 4455667
Q ss_pred ChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHH
Q 041922 218 ATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHL 297 (523)
Q Consensus 218 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~ 297 (523)
.||||+|+..|+.+++++|+++ +++++..|..|+||||+|+..|+.+++++|+++|+ ++|.+|..|+||||+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------~~~~~~~~g~t~L~~ 317 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV-------MVDATTRMGYTPLHV 317 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC-------CTTCCCSSCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCc-------cCCCCCCCCCCHHHH
Confidence 7777777777777777777765 66677777777777777777777777777777776 667777777777777
Q ss_pred HHHhCCCCC
Q 041922 298 AAKFGEYGP 306 (523)
Q Consensus 298 Aa~~~~~~~ 306 (523)
|+..|+.++
T Consensus 318 A~~~g~~~~ 326 (437)
T 1n11_A 318 ASHYGNIKL 326 (437)
T ss_dssp HHHSSCSHH
T ss_pred HHHcCcHHH
Confidence 777766543
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-38 Score=328.26 Aligned_cols=314 Identities=16% Similarity=0.101 Sum_probs=256.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.|++. +.+++.++.+|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 49 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-----~~~~~~~~g~t~L~~A~ 121 (437)
T 1n11_A 49 TPLHMAARAGHTEVAKYLLQN--KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNA-----NPNLATTAGHTPLHIAA 121 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH--TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC-----CTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC-----CCCCCCCCCCcHHHHHH
Confidence 589999999999999999998 67778899999999999999999999999999864 48889999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCc-eeEeccCCcccc-hhhhhhcCCccCCccCCCCCCCccccCCCCCCCC-c-cC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLA-NCSWSSGNLEDK-EHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDT-F-SV 159 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l~~~~~~~~v-~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~-~-~~ 159 (523)
+.|+.+++++|++.+++....+..+.+ ++.++..++.++ ++|+++ +.+++..|..|.||||.|+...... . .+
T Consensus 122 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 122 REGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER---DAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999988877777776 777777777764 888887 8899999999999999887533222 2 33
Q ss_pred CCCCCCC----Cccccchhhh---HHHHHHHHhhccC-------CCcchhhhh----HHHHHHHHHHhc----ccccCCC
Q 041922 160 PETPPVL----ENDQIFQSRN---ICLESAVAVHNKD-------GNARDETAT----AAVQELKFMKKK----DQQSGRK 217 (523)
Q Consensus 160 l~~~~~~----~~~~~~~~~~---~~~~~~~~l~~~~-------~~~~~~~~~----~~~~~v~~Ll~~----~~~~~~g 217 (523)
++.+.+. ..+..|.++. +..+.++.+++.. ..+.++.|. +..+++++|+++ +..+..|
T Consensus 199 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g 278 (437)
T 1n11_A 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 278 (437)
T ss_dssp GGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred HhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCC
Confidence 4444332 2233444433 2344555555432 223344444 346799999988 5677899
Q ss_pred ChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHH
Q 041922 218 ATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHL 297 (523)
Q Consensus 218 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~ 297 (523)
.||||+|+..|+.+++++|+++ +++++.+|..|+||||+|+.+|+.+++++|+++|+ ++|.+|..|+||||+
T Consensus 279 ~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------d~n~~~~~g~t~L~~ 350 (437)
T 1n11_A 279 LTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA-------DVNAKTKLGYSPLHQ 350 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC-------CTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC-------CCCCCCCCCCCHHHH
Confidence 9999999999999999999998 89999999999999999999999999999999999 999999999999999
Q ss_pred HHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhhhh
Q 041922 298 AAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKTHK 354 (523)
Q Consensus 298 Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~~~ 354 (523)
|+..|+.+++ +.++..++ .+.+|.+|+||+++|.+...
T Consensus 351 A~~~g~~~iv-------------------~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 351 AAQQGHTDIV-------------------TLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp HHHTTCHHHH-------------------HHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred HHHCChHHHH-------------------HHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 9999986543 22233333 58899999999999987643
No 3
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=317.65 Aligned_cols=295 Identities=16% Similarity=0.104 Sum_probs=237.0
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
.++|+.|+..|+.+.++.++.+. +.+.+..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA-----DVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCccCCCCCcHHHHH
Confidence 46899999999999999999864 56778899999999999999999999999999864 5899999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCc-eeEeccCCcccc-hhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLA-NCSWSSGNLEDK-EHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVP 160 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l~~~~~~~~v-~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l 160 (523)
+..|+.+++++|+++|++++..+..+.+ +++++..++.++ ++|+++ +++++..+..|.||+|.++..
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~~~l~~a~~~-------- 167 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH---GADPTLVNCHGKSAVDMAPTP-------- 167 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHCSSH--------
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCccccCCCCcchHHHhhh--------
Confidence 9999999999999999999888877777 778887777774 889988 899999999999999988631
Q ss_pred CCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHc---ChHHHH
Q 041922 161 ETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKM---GVTEMV 233 (523)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~---g~~~~v 233 (523)
... ........... ..........+.++.++.. ...+..|.||||+|+.. ++.+++
T Consensus 168 ------------~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~ 230 (351)
T 3utm_A 168 ------------ELR----ERLTYEFKGHS-LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVA 230 (351)
T ss_dssp ------------HHH----HHHHHHHHHHH-HHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHH
T ss_pred ------------hhH----HHHHhhhcccH-HHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHH
Confidence 100 00000000000 0001111123355555544 34557899999999999 668999
Q ss_pred HHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcch
Q 041922 234 EKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAA 313 (523)
Q Consensus 234 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~ 313 (523)
++|++. +++++.+|.+|+||||+|+.+|+.+++++|+++|+ ++|.+|..|+||||+|+..|+.+++
T Consensus 231 ~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------~~n~~d~~g~t~L~~A~~~~~~~~v------ 296 (351)
T 3utm_A 231 ELLLRK-GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA-------KMNALDSLGQTALHRAALAGHLQTC------ 296 (351)
T ss_dssp HHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCHHHHHHHHTCHHHH------
T ss_pred HHHHHc-CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC-------CCCCcCCCCCCHHHHHHHcCcHHHH------
Confidence 999997 89999999999999999999999999999999999 9999999999999999999996543
Q ss_pred hhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhhhhhHHh
Q 041922 314 LQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKTHKELVK 358 (523)
Q Consensus 314 l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~~~~l~~ 358 (523)
+.++..++ .+.+|.+|+||+++|.+.-.+++.
T Consensus 297 -------------~~Ll~~gad~~~~~~~g~tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 297 -------------RLLLSYGSDPSIISLQGFTAAQMGNEAVQQILS 329 (351)
T ss_dssp -------------HHHHHTTCCTTCCCTTSCCHHHHSCHHHHHHHH
T ss_pred -------------HHHHHcCCCCCCcCCCCCChhhhhhHHHHHHHH
Confidence 22233333 589999999999999776555443
No 4
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=294.70 Aligned_cols=236 Identities=14% Similarity=0.102 Sum_probs=200.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+++.+|.+|.||||+|+..|+.+++++|++.+. +++.+|.+|+||||+|+
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA-----QVNGVTADWHTPLFNAC 77 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHH
Confidence 579999999999999999998 67788899999999999999999999999999863 58999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|++++ .+.+|.||||.|+.
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~-----------------------------------~~~~g~t~L~~A~~------------ 110 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQ-----------------------------------PESDLASPIHEAAR------------ 110 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSS-----------------------------------CSCTTCCHHHHHHH------------
T ss_pred HcCCHHHHHHHHHCCCCCC-----------------------------------CCCCCCCHHHHHHH------------
Confidence 9999999999999987652 23459999998762
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhh
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDT 239 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 239 (523)
.+..++++.|+++ +..+..|.||||+|+..|+.+++++|++.
T Consensus 111 ----------------------------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 111 ----------------------------------RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp ----------------------------------TTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------------------------------cCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 1225588899887 66788999999999999999999999998
Q ss_pred CCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHH
Q 041922 240 IPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWE 319 (523)
Q Consensus 240 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~ 319 (523)
|++++. |..|+||||+|+.+++.+++++|+++|+ +++.+|.+|+||||+|+..++...+
T Consensus 157 -g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ga-------d~~~~d~~g~tpl~~A~~~~~~~~~------------ 215 (261)
T 2xai_A 157 -GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGA-------DTQAKNAEGKRPVELVPPESPLAQL------------ 215 (261)
T ss_dssp -TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSCCGGGGSCTTCTHHHH------------
T ss_pred -CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCC-------CCCCcCCCCCChhhhccccccHHHH------------
Confidence 899985 8999999999999999999999999999 9999999999999999966542100
Q ss_pred hHHHHHHHhhCCcc-----cccccCCCCCChhHHhhhhh
Q 041922 320 IKWYKFVKESMPRY-----FFLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 320 ~~~~~~v~~~~~~~-----~~~~~n~~G~Tpl~la~~~~ 353 (523)
.++...++. -...+|..|+||+|++.+..
T Consensus 216 -----ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~ 249 (261)
T 2xai_A 216 -----FLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249 (261)
T ss_dssp -----HHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSS
T ss_pred -----HHhccCCccHHHHHHHHHHHHhchhccccCcccC
Confidence 011111111 14688999999999998653
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=296.10 Aligned_cols=236 Identities=18% Similarity=0.106 Sum_probs=181.9
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCC---------ccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccC
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPM---------SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDR 74 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~---------~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~ 74 (523)
..+|.|+..|+.+.+.+++...|. ...+..|..|+||||+||..|+.+++++|++.+. +++.+|.+
T Consensus 17 ~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-----~~~~~~~~ 91 (285)
T 3d9h_A 17 RGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW-----AVNIITAD 91 (285)
T ss_dssp -------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC-----CSCEECTT
T ss_pred HHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCC
Confidence 568999999999999997665322 1245678999999999999999999999999763 48999999
Q ss_pred CChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCC
Q 041922 75 GDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDG 154 (523)
Q Consensus 75 G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~ 154 (523)
|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||.|+.
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~----------------------------------~~~~~~g~t~L~~A~~--- 134 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQV----------------------------------NGVTADWHTPLFNACV--- 134 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCS----------------------------------SCCCTTCCCHHHHHHH---
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCC----------------------------------CCCCCCCCCHHHHHHH---
Confidence 999999999999999999999987654 6788999999998862
Q ss_pred CCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcc---cccCCCChHHHHHHHcChHH
Q 041922 155 DTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKD---QQSGRKATPILIAAKMGVTE 231 (523)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~---~~~~~g~tpLh~Aa~~g~~~ 231 (523)
.+..++++.|+++. ..+.+|.||||+|+..|+.+
T Consensus 135 -------------------------------------------~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~ 171 (285)
T 3d9h_A 135 -------------------------------------------SGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVE 171 (285)
T ss_dssp -------------------------------------------HTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHH
T ss_pred -------------------------------------------cCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 22356889998872 23456999999999999999
Q ss_pred HHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCc
Q 041922 232 MVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPG 311 (523)
Q Consensus 232 ~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g 311 (523)
++++|++. +++++.+|.+|+||||+|+.+|+.+++++|+++|+ +++. |..|+||||+|+..++.+++
T Consensus 172 ~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~-~~~g~t~L~~A~~~~~~~~v---- 238 (285)
T 3d9h_A 172 CVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLESGA-------DVNQ-GKGQDSPLHAVVRTASEELA---- 238 (285)
T ss_dssp HHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTC-------CTTC-CBTTBCHHHHHHHTTCHHHH----
T ss_pred HHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCC-------CCCC-CCCCCCHHHHHHHcCCHHHH----
Confidence 99999997 89999999999999999999999999999999999 8884 99999999999999985543
Q ss_pred chhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhh
Q 041922 312 AALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKT 352 (523)
Q Consensus 312 ~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~ 352 (523)
+.++..++ ++.+|.+|+||+++|.++
T Consensus 239 ---------------~~Ll~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 239 ---------------CLLMDFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp ---------------HHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred ---------------HHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence 22222233 689999999999999843
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-36 Score=291.48 Aligned_cols=240 Identities=18% Similarity=0.167 Sum_probs=211.9
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccc-CCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKL-TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~-~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
++|+.|+..|+.+.++.+++.. .+++.. +..|.||||+|+..|+.+++++|++.+. +++.+|.+|.||||+|
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 79 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-----DPVLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-----CCcccCCCCCCHHHHH
Confidence 5789999999999999999984 455555 7889999999999999999999999864 4888999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCc-eeEeccCCcccc-hhhhhhcCCccCCccC----------CCCCCCccccCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLA-NCSWSSGNLEDK-EHHREKRGTYMGLSSN----------DDHGKSSRDSRP 150 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l~~~~~~~~v-~~l~~~~~~~~~l~~~----------d~~g~tpLh~a~ 150 (523)
+..|+.+++++|+++|++++..+..+.+ ++.++..++.++ ++|+++ +.+++.. +..|.||||.|+
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR---GANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT---TCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh---CCCcccccccHHHHHhhccCCCcHHHHHH
Confidence 9999999999999999999888877777 777777777764 888887 7777766 888999999876
Q ss_pred CCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc-----ccccCCCChHHHHHH
Q 041922 151 DKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK-----DQQSGRKATPILIAA 225 (523)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~-----~~~~~~g~tpLh~Aa 225 (523)
. .+..++++.|+++ +..+..|.||||+|+
T Consensus 157 ~----------------------------------------------~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 157 E----------------------------------------------KGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp H----------------------------------------------HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred H----------------------------------------------cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 2 2235688888876 667788999999999
Q ss_pred HcCh----HHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHh-ccccCCccccccccccCCCCcHhHHHHH
Q 041922 226 KMGV----TEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLD-RKMLGESDLNIFEHVDIKGNSALHLAAK 300 (523)
Q Consensus 226 ~~g~----~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~~~~~~~~~~~in~~d~~G~TpLH~Aa~ 300 (523)
..|+ .+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|++ .|+ +++.+|.+|+||||+|++
T Consensus 191 ~~~~~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~-------~~~~~~~~g~t~l~~A~~ 262 (285)
T 1wdy_A 191 LSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI-------EINDTDSDGKTALLLAVE 262 (285)
T ss_dssp HCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC-------CTTCCCTTSCCHHHHHHH
T ss_pred HccccchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCC-------CccccCCCCCcHHHHHHH
Confidence 9999 9999999997 89999999999999999999999999999999 787 999999999999999999
Q ss_pred hCCCCCc
Q 041922 301 FGEYGPW 307 (523)
Q Consensus 301 ~~~~~~~ 307 (523)
.++.+++
T Consensus 263 ~~~~~i~ 269 (285)
T 1wdy_A 263 LKLKKIA 269 (285)
T ss_dssp TTCHHHH
T ss_pred cCcHHHH
Confidence 9986543
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.8e-35 Score=276.93 Aligned_cols=215 Identities=20% Similarity=0.224 Sum_probs=179.8
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCC
Q 041922 28 SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADE 107 (523)
Q Consensus 28 ~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 107 (523)
.+.+..|.+|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------ 70 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA-----NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV------ 70 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC------
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCC-----CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC------
Confidence 3566788899999999999999999999998764 48888999999999999999999999999887544
Q ss_pred CCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhc
Q 041922 108 GLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHN 187 (523)
Q Consensus 108 ~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (523)
+.+|..|.||||.|+.
T Consensus 71 ----------------------------~~~~~~g~t~L~~A~~------------------------------------ 86 (237)
T 3b7b_A 71 ----------------------------DPKDAEGSTCLHLAAK------------------------------------ 86 (237)
T ss_dssp ----------------------------CCCCTTSCCHHHHHHH------------------------------------
T ss_pred ----------------------------CCCCCCCCcHHHHHHH------------------------------------
Confidence 5677889999997762
Q ss_pred cCCCcchhhhhHHHHHHHHHHhc-----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcC
Q 041922 188 KDGNARDETATAAVQELKFMKKK-----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENR 262 (523)
Q Consensus 188 ~~~~~~~~~~~~~~~~v~~Ll~~-----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 262 (523)
.+..+++++|+++ +..+..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.+|
T Consensus 87 ----------~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 87 ----------KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp ----------TTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHC
T ss_pred ----------cCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCC
Confidence 1224588888876 44667899999999999999999999996 8999999999999999999999
Q ss_pred chhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCC
Q 041922 263 QTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNK 341 (523)
Q Consensus 263 ~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~ 341 (523)
+.+++++|+++|+ +++.+|..|+||||+|+..++.++ ++.++..+. ++.+|++
T Consensus 156 ~~~~~~~Ll~~g~-------~~~~~~~~g~t~L~~A~~~~~~~~-------------------v~~Ll~~gad~~~~d~~ 209 (237)
T 3b7b_A 156 CVDIAEILLAAKC-------DLHAVNIHGDSPLHIAARENRYDC-------------------VVLFLSRDSDVTLKNKE 209 (237)
T ss_dssp CHHHHHHHHTTTC-------CTTCCCTTCCCHHHHHHHTTCHHH-------------------HHHHHTTTCCTTCCCTT
T ss_pred CHHHHHHHHHcCC-------CCCCcCCCCCCHHHHHHHhCCHhH-------------------HHHHHHcCCCCCccCCC
Confidence 9999999999998 999999999999999999988543 233333343 5888999
Q ss_pred CCChhHHhhhhhh
Q 041922 342 GKTPKEIFTKTHK 354 (523)
Q Consensus 342 G~Tpl~la~~~~~ 354 (523)
|+||+++|....+
T Consensus 210 g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 210 GETPLQCASLNSQ 222 (237)
T ss_dssp SCCHHHHSCTTCH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999987654
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.6e-36 Score=287.87 Aligned_cols=254 Identities=15% Similarity=0.069 Sum_probs=167.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMS-REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~-~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
.+||.|+..|+.+.++.+++..... .++.+|..|.||||+|+..|+.+++++|++.|. +++.+|..|.||||+|
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-----~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA-----GVLVAERGGHTALHLA 85 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-----CSSCCCTTSCCHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHHH
Confidence 5788899999999998888873332 267788889999999999999999999998764 4788888899999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
++.|+.+++++|++++++......... + ..........+.++++.+......
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~---~------------------~~~~~~~~~~~~~~~~~~~~~~~~------- 137 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTY---L------------------TQSQDCTPDTSHAPAAVDSQPNPE------- 137 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC---------------------------------------------------------
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHH---h------------------hcccccCcchhcchhhhccccccc-------
Confidence 999999999999988876432111100 0 001122233455555544321000
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHh----cccccCCCChHHHHHHHcChHHHHHHHHh
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKK----KDQQSGRKATPILIAAKMGVTEMVEKILD 238 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~----~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~ 238 (523)
......+.. -+..+..|.||||+|+..|+.+++++|++
T Consensus 138 --------------------------------------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 179 (282)
T 1oy3_D 138 --------------------------------------NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179 (282)
T ss_dssp --------------------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------------------------hhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 001111111 15677889999999999999999999999
Q ss_pred hCCCcccccccC-CCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhH
Q 041922 239 TIPVAIHDLDSE-KKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQ 317 (523)
Q Consensus 239 ~~~~~~~~~d~~-G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~ 317 (523)
. |++++..+.. |+||||+|+.+|+.+++++|+++|+ ++|.+|.+|+||||+|+..++.+++
T Consensus 180 ~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-------d~~~~d~~g~tpL~~A~~~~~~~~v---------- 241 (282)
T 1oy3_D 180 A-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA-------DPTARMYGGRTPLGSALLRPNPILA---------- 241 (282)
T ss_dssp H-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCHHHHHHTSSCHHHH----------
T ss_pred c-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC-------CCcccccCCCCHHHHHHHcCCcHHH----------
Confidence 7 8999999854 9999999999999999999999999 9999999999999999999985543
Q ss_pred HHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhhhhh
Q 041922 318 WEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKTHKE 355 (523)
Q Consensus 318 ~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~~~~ 355 (523)
+.++..++ ++.+|.+|+||++++......
T Consensus 242 ---------~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 242 ---------RLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp ---------HHHHHTTCCCCCCC----------------
T ss_pred ---------HHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 23333344 689999999999999876543
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5.2e-36 Score=285.16 Aligned_cols=214 Identities=19% Similarity=0.274 Sum_probs=128.9
Q ss_pred cccccCCCCCcHHHHHHHcC-------------CHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHH
Q 041922 29 REAKLTRSGDTALHIAAAAG-------------QTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMA 95 (523)
Q Consensus 29 ~~~~~~~~g~T~Lh~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 95 (523)
++|.+|.+|.||||+|+..| +.++++.|++.+.+ ..+..|..|+||||+|+..|+.+++++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGAS----LHNQTDRTGETALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp ------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCC----cccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 45667788888888888866 77888888877642 23455778888888888888888888888
Q ss_pred hcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhh
Q 041922 96 SKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSR 175 (523)
Q Consensus 96 ~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~ 175 (523)
++|+++ +.+|..|+||||.|+.
T Consensus 78 ~~g~~~----------------------------------~~~~~~g~t~L~~A~~------------------------ 99 (253)
T 1yyh_A 78 EASADA----------------------------------NIQDNMGRTPLHAAVS------------------------ 99 (253)
T ss_dssp HTTCCT----------------------------------TCCCTTSCCHHHHHHH------------------------
T ss_pred HcCCCC----------------------------------CCCCCCCCCHHHHHHH------------------------
Confidence 776544 5567777888886651
Q ss_pred hHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc-----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccC
Q 041922 176 NICLESAVAVHNKDGNARDETATAAVQELKFMKKK-----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSE 250 (523)
Q Consensus 176 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~-----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 250 (523)
.+..++++.|+++ +..+..|.||||+|+..|+.+++++|++. +++++.+|.+
T Consensus 100 ----------------------~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~ 156 (253)
T 1yyh_A 100 ----------------------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDL 156 (253)
T ss_dssp ----------------------HTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBCTT
T ss_pred ----------------------cCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcCCC
Confidence 1224477777765 34556788888888888888888888885 7788888888
Q ss_pred CCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhC
Q 041922 251 KKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESM 330 (523)
Q Consensus 251 G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~ 330 (523)
|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|+..|+.+++ +.++
T Consensus 157 g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~tpL~~A~~~~~~~~v-------------------~~Ll 210 (253)
T 1yyh_A 157 GKSALHWAAAVNNVDAAVVLLKNGA-------NKDMQNNREETPLFLAAREGSYETA-------------------KVLL 210 (253)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSCCHHHHHHHHTCHHHH-------------------HHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC-------CCCCcCCCCCCHHHHHHHCCCHHHH-------------------HHHH
Confidence 8888888888888888888888887 7788888888888888888775432 2222
Q ss_pred Cccc-ccccCCCCCChhHHhhhhh
Q 041922 331 PRYF-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 331 ~~~~-~~~~n~~G~Tpl~la~~~~ 353 (523)
..++ .+.+|..|+||+++|.++.
T Consensus 211 ~~ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 211 DHFANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HcCCCccccccCCCCHHHHHHHcC
Confidence 2222 4677888888888887654
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.1e-34 Score=271.84 Aligned_cols=210 Identities=21% Similarity=0.226 Sum_probs=153.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhH
Q 041922 2 EVNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHL 81 (523)
Q Consensus 2 ~~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 81 (523)
...+|+.|+..|+.+.++.++...+. ..+..|..|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~ 79 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGV-----PVNDKDDAGWSPLHI 79 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-----CSCCCCTTSCCHHHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC-----CCCCcCCCCCCHHHH
Confidence 45689999999999999999998643 356788999999999999999999999998763 488899999999999
Q ss_pred HHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCC
Q 041922 82 AAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPE 161 (523)
Q Consensus 82 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~ 161 (523)
|+..|+.+++++|+++|+++ +.+
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~----------------------------------~~~----------------------- 102 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHV----------------------------------NAV----------------------- 102 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCT----------------------------------TCC-----------------------
T ss_pred HHHcCHHHHHHHHHHcCCCC----------------------------------CCC-----------------------
Confidence 99999999999999988755 222
Q ss_pred CCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCC
Q 041922 162 TPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIP 241 (523)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 241 (523)
+..|.||||+|+..|+.+++++|++. +
T Consensus 103 ----------------------------------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~-g 129 (231)
T 3aji_A 103 ----------------------------------------------------NQNGCTPLHYAASKNRHEIAVMLLEG-G 129 (231)
T ss_dssp ----------------------------------------------------CTTSCCHHHHHHHTTCHHHHHHHHHT-T
T ss_pred ----------------------------------------------------CCCCCCHHHHHHHcCCHHHHHHHHHc-C
Confidence 33466666666666677777766665 6
Q ss_pred CcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhH
Q 041922 242 VAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIK 321 (523)
Q Consensus 242 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~ 321 (523)
++++.+|..|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|+..++.+++
T Consensus 130 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------~~~~~~~~g~t~L~~A~~~~~~~~v-------------- 188 (231)
T 3aji_A 130 ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA-------STNIQDTEGNTPLHLACDEERVEEA-------------- 188 (231)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------CSCCCCTTSCCHHHHHHHTTCHHHH--------------
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC-------CccccCCCCCCHHHHHHHCCCHHHH--------------
Confidence 6666666667777777777677777777776666 6666666677777777666664322
Q ss_pred HHHHHHhhCCccc-ccccCCCCCChhHHhhhhh
Q 041922 322 WYKFVKESMPRYF-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 322 ~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~~ 353 (523)
+.++..++ ++.+|.+|+||+++|.+..
T Consensus 189 -----~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 189 -----KFLVTQGASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp -----HHHHHTTCCSCCCCTTSCCHHHHSCHHH
T ss_pred -----HHHHHCCCCCCCCCCCCCCHHHHHHhhH
Confidence 11111222 3566666777777665543
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-35 Score=294.65 Aligned_cols=245 Identities=18% Similarity=0.132 Sum_probs=191.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCC-CCCcHHHHHHHcCCHHHHHHHHHHhccc-------------------
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTR-SGDTALHIAAAAGQTNIVSELVEIMGEN------------------- 63 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~-~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~------------------- 63 (523)
.+|+.|+..|+.+.|+.||+. +.++|.++. .|+||||+||..|+.++|++|++.|++-
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 469999999999999999998 677777765 5999999999999999999999987531
Q ss_pred ---------ccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCC----------CCc-eeEeccCCccc-c
Q 041922 64 ---------ASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADE----------GLA-NCSWSSGNLED-K 122 (523)
Q Consensus 64 ---------~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~----------~~~-l~l~~~~~~~~-v 122 (523)
...+++.+|..|.||||+|+..|+.+++++|+++|++++..... +.+ +++++..++.+ +
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v 184 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 184 (337)
T ss_dssp HHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHH
T ss_pred chhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHH
Confidence 12346777788888888888888888888888887776543221 222 44455555554 3
Q ss_pred hhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhh-hHHH
Q 041922 123 EHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETA-TAAV 201 (523)
Q Consensus 123 ~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 201 (523)
++|+++ .+++++.+|..|.||+|.++. ..+ ....
T Consensus 185 ~~LL~~--~gad~n~~d~~g~t~l~~~~~-------------------------------------------~~~~~~~~ 219 (337)
T 4g8k_A 185 KILLDE--MGADVNACDNMGRNALIHALL-------------------------------------------SSDDSDVE 219 (337)
T ss_dssp HHHHHH--SCCCTTCCCTTSCCHHHHHHH-------------------------------------------HSCTTTHH
T ss_pred HHHHhc--cCCCcCccCCCCCcHHHHHHH-------------------------------------------HcCcccHH
Confidence 666643 367777777777777774320 011 1123
Q ss_pred HHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccC
Q 041922 202 QELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLG 277 (523)
Q Consensus 202 ~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~ 277 (523)
+++++|+++ +.+|.+|.||||+|+..|+.++++.|++..+++++.+|.+|+||||+|+++|+.++|++|+++|+
T Consensus 220 ~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA-- 297 (337)
T 4g8k_A 220 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA-- 297 (337)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC--
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC--
Confidence 477888877 67788999999999999999999999998789999999999999999999999999999999999
Q ss_pred CccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 278 ESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 278 ~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
++|.+ ||||+|++.|+.+++
T Consensus 298 -----d~n~~-----~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 298 -----STDCG-----DLVMTARRNYDHSLV 317 (337)
T ss_dssp -----SSTTC-----CHHHHHHHTTCHHHH
T ss_pred -----CCCCC-----CHHHHHHHcCCHHHH
Confidence 77654 599999999996654
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=288.12 Aligned_cols=208 Identities=13% Similarity=0.133 Sum_probs=157.5
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCC------ccccccCCCCCcHHHHHHHcCCHH-HHHHHHHHhcccccccccccccCC
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPM------SREAKLTRSGDTALHIAAAAGQTN-IVSELVEIMGENASNVLKIQNDRG 75 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~------~~~~~~~~~g~T~Lh~Aa~~g~~~-~v~~Ll~~~~~~~~~~~~~~d~~G 75 (523)
.++|+.||..|+.+.|+.||+.... ...+..+..|.||||.|+..++.+ +++.|++.| .++|.+|.+|
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G-----advn~~d~~G 86 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASG-----LGVNVTSQDG 86 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CC-----CCTTCCCTTS
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCC-----CCCCCcCCCC
Confidence 3689999999999999999986432 124567888999999999988765 788998876 4599999999
Q ss_pred ChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCC
Q 041922 76 DTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGD 155 (523)
Q Consensus 76 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~ 155 (523)
+||||+|+..|+.+++++|++.|+++ +.++.+|.||+|.|+.
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~----------------------------------~~~~~~g~t~l~~a~~---- 128 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANA----------------------------------GARNADQAVPLHLACQ---- 128 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCT----------------------------------TCCCTTCCCHHHHHHH----
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCc----------------------------------CccCCCCCCccccccc----
Confidence 99999999999999999999987654 6778899999997751
Q ss_pred CccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHH
Q 041922 156 TFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTE 231 (523)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~ 231 (523)
....++++.|++. +.+|..|.||||+|+..|+.+
T Consensus 129 ------------------------------------------~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~ 166 (269)
T 4b93_B 129 ------------------------------------------QGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHE 166 (269)
T ss_dssp ------------------------------------------HTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred ------------------------------------------cChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 2234588888887 677889999999999999999
Q ss_pred HHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCC
Q 041922 232 MVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGE 303 (523)
Q Consensus 232 ~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~ 303 (523)
++++|++. |++++.+|..|+||||+|+.+|+.++|++|+++|+ ++|.+|++|+||||+|+++++
T Consensus 167 ~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga-------d~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 167 LVALLLQH-GASINASNNKGNTALHEAVIEKHVFVVELLLLHGA-------SVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp GHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC-------CSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHC-CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC-------CCCCcCCCCCCHHHHHHhCCc
Confidence 99999997 89999999999999999999999999999999999 999999999999999987765
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.7e-35 Score=281.52 Aligned_cols=211 Identities=16% Similarity=0.121 Sum_probs=166.0
Q ss_pred hHHHHHHHcC-------------CHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccc
Q 041922 4 NCLSKFAMRG-------------QWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKI 70 (523)
Q Consensus 4 ~~L~~Aa~~g-------------~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~ 70 (523)
.+||.|+..| +.+.++.+++..+.. .+..|..|.||||+|+..|+.+++++|++.+. +++.
T Consensus 12 tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~ 85 (253)
T 1yyh_A 12 TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL-HNQTDRTGETALHLAARYSRSDAAKRLLEASA-----DANI 85 (253)
T ss_dssp -----------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTC
T ss_pred cHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-----CCCC
Confidence 5788999877 889999999884332 23458999999999999999999999999864 5899
Q ss_pred cccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCC
Q 041922 71 QNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRP 150 (523)
Q Consensus 71 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~ 150 (523)
+|..|+||||+|+..|+.+++++|++.++ .+++.+|..|.||||.|+
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~---------------------------------~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRA---------------------------------TDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTT---------------------------------SCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------------------------------CCccccCCCCCcHHHHHH
Confidence 99999999999999999999999999874 244678889999999886
Q ss_pred CCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHH
Q 041922 151 DKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAK 226 (523)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~ 226 (523)
. .+ ..++++.|+++ +.+|..|.||||+|+.
T Consensus 133 ~-------------------------------------------~~---~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 166 (253)
T 1yyh_A 133 R-------------------------------------------LA---VEGMLEDLINSHADVNAVDDLGKSALHWAAA 166 (253)
T ss_dssp H-------------------------------------------HT---CSSHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred H-------------------------------------------cC---hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 2 11 13488888887 6778899999999999
Q ss_pred cChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCC
Q 041922 227 MGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGP 306 (523)
Q Consensus 227 ~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~ 306 (523)
.|+.+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|+++|+ +++.+|..|+||||+|++.|+.++
T Consensus 167 ~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-------~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 167 VNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFA-------NRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-------CccccccCCCCHHHHHHHcCCHHH
Confidence 9999999999997 89999999999999999999999999999999999 999999999999999999999765
Q ss_pred c
Q 041922 307 W 307 (523)
Q Consensus 307 ~ 307 (523)
+
T Consensus 239 ~ 239 (253)
T 1yyh_A 239 V 239 (253)
T ss_dssp H
T ss_pred H
Confidence 4
No 14
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.5e-35 Score=284.02 Aligned_cols=225 Identities=17% Similarity=0.194 Sum_probs=185.8
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
+.+|+.|+..|+.+.++.+++. +.+++..|..|.||||+|+..|+.+++++|++.|. +++.+|..|.||||+|
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-----~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGA-----NINQPDNEGWIPLHAA 113 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCCCCcHHHHH
Confidence 4679999999999999999998 66788899999999999999999999999999864 5899999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|+++ +..|..|.||||.|+.
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~----------------------------------~~~~~~g~t~l~~A~~----------- 148 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHV----------------------------------GAVNSEGDTPLDIAEE----------- 148 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCT----------------------------------TCCCTTSCCHHHHCCS-----------
T ss_pred HHcCCHHHHHHHHhCCCCC----------------------------------CCcCCCCCCHHHHHHh-----------
Confidence 9999999999999987654 6678899999998872
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcch----hhhhHHHHHHHHHHhc-----ccccCCCChHHHHHHHcChHHHH
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARD----ETATAAVQELKFMKKK-----DQQSGRKATPILIAAKMGVTEMV 233 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~v~~Ll~~-----~~~~~~g~tpLh~Aa~~g~~~~v 233 (523)
.....++..++...+.... .......+.+..++.. ...+..|.||||+|+..|+.+++
T Consensus 149 -------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 215 (299)
T 1s70_B 149 -------------EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL 215 (299)
T ss_dssp -------------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred -------------cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHH
Confidence 2333344433333222211 1111122234444443 33456899999999999999999
Q ss_pred HHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHH
Q 041922 234 EKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAK 300 (523)
Q Consensus 234 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~ 300 (523)
++|++. |++++.+|.+|+||||+|+.+|+.+++++|+++|+ +++.+|..|+||||+|+.
T Consensus 216 ~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-------d~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 216 KLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC-------DMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCTTTSCCS
T ss_pred HHHHHc-CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC-------CCCCcCCCCCCHHHHHHH
Confidence 999997 89999999999999999999999999999999999 999999999999999965
No 15
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2e-35 Score=278.57 Aligned_cols=215 Identities=13% Similarity=0.101 Sum_probs=184.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHc--CCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhH
Q 041922 4 NCLSKFAMRGQWDNFVQAYEN--NPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHL 81 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~--~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 81 (523)
.+||.|+..|+.+.++.+++. ..+.+++..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA-----SPMALDRHGQTAAHL 85 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCC-----CccccCCCCCCHHHH
Confidence 578889999999988888862 1256677888889999999999999999999998763 477888889999999
Q ss_pred HHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCC
Q 041922 82 AAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPE 161 (523)
Q Consensus 82 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~ 161 (523)
|+..|+.+++++|++.++.. ..+++..|..|.||||.|+.
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~------------------------------~~~~~~~~~~g~t~L~~A~~---------- 125 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPG------------------------------TLDLEARNYDGLTALHVAVN---------- 125 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTT------------------------------SCCTTCCCTTSCCHHHHHHH----------
T ss_pred HHHcCCHHHHHHHHHcCCCc------------------------------cccccccCcCCCcHHHHHHH----------
Confidence 99999999999999887632 44678889999999998762
Q ss_pred CCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----cccc-CCCChHHHHHHHcChHHHHHHH
Q 041922 162 TPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQS-GRKATPILIAAKMGVTEMVEKI 236 (523)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~-~~g~tpLh~Aa~~g~~~~v~~L 236 (523)
.+..++++.|+++ +..+ ..|.||||+|+..|+.+++++|
T Consensus 126 ------------------------------------~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 169 (241)
T 1k1a_A 126 ------------------------------------TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL 169 (241)
T ss_dssp ------------------------------------HTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------------------------cCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHH
Confidence 2235688888887 4445 6799999999999999999999
Q ss_pred HhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 237 LDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 237 l~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
++. |++++.+|.+|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|+..++.+++
T Consensus 170 l~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~tpl~~A~~~~~~~i~ 232 (241)
T 1k1a_A 170 LQH-GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA-------DSSLKNCHNDTPLMVARSRRVIDIL 232 (241)
T ss_dssp HHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred HHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC-------CCCCcCCCCCCHHHHHHhcCcHHHH
Confidence 997 89999999999999999999999999999999999 9999999999999999998886544
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.9e-35 Score=274.86 Aligned_cols=215 Identities=22% Similarity=0.250 Sum_probs=181.0
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCc
Q 041922 31 AKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLA 110 (523)
Q Consensus 31 ~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 110 (523)
+.+|.+|+||||+||..|+.+++++|++.... .+.+++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------- 72 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP--------- 72 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---------
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc---------
Confidence 56799999999999999999999999985432 22568999999999999999999999999999987654
Q ss_pred eeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCC
Q 041922 111 NCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDG 190 (523)
Q Consensus 111 l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (523)
+.+|..|.||||.|+.
T Consensus 73 -------------------------~~~~~~g~t~l~~A~~--------------------------------------- 88 (241)
T 1k1a_A 73 -------------------------MALDRHGQTAAHLACE--------------------------------------- 88 (241)
T ss_dssp -------------------------TCCCTTSCCHHHHHHH---------------------------------------
T ss_pred -------------------------cccCCCCCCHHHHHHH---------------------------------------
Confidence 6678899999998862
Q ss_pred CcchhhhhHHHHHHHHHHhc--------ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccc-cCCCcHHHHHHHc
Q 041922 191 NARDETATAAVQELKFMKKK--------DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLD-SEKKNLVLLAVEN 261 (523)
Q Consensus 191 ~~~~~~~~~~~~~v~~Ll~~--------~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~ 261 (523)
.+..++++.|++. +..+..|.||||+|+..|+.+++++|++. +.+++..| ..|+||||+|+.+
T Consensus 89 -------~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 89 -------HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp -------TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHT
T ss_pred -------cCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHHHc
Confidence 1224577778766 34567899999999999999999999997 89999999 8999999999999
Q ss_pred CchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCC
Q 041922 262 RQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNN 340 (523)
Q Consensus 262 ~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~ 340 (523)
|+.+++++|+++|+ ++|.+|.+|+||||+|+..++.+++ +.++..++ ++.+|.
T Consensus 161 ~~~~~v~~Ll~~g~-------~~~~~~~~g~t~L~~A~~~~~~~~v-------------------~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 161 NSLSMVQLLLQHGA-------NVNAQMYSGSSALHSASGRGLLPLV-------------------RTLVRSGADSSLKNC 214 (241)
T ss_dssp TCHHHHHHHHHTTC-------CTTCBCTTSCBHHHHHHHHTCHHHH-------------------HHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHcCC-------CCCCcCCCCCCHHHHHHHcCCHHHH-------------------HHHHhcCCCCCCcCC
Confidence 99999999999999 9999999999999999999986543 22222333 588999
Q ss_pred CCCChhHHhhhhh
Q 041922 341 KGKTPKEIFTKTH 353 (523)
Q Consensus 341 ~G~Tpl~la~~~~ 353 (523)
+|+||+++|.+..
T Consensus 215 ~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 215 HNDTPLMVARSRR 227 (241)
T ss_dssp TSCCTTTTCSSHH
T ss_pred CCCCHHHHHHhcC
Confidence 9999999998764
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.5e-35 Score=272.26 Aligned_cols=213 Identities=18% Similarity=0.184 Sum_probs=185.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccc-cccCCChHH
Q 041922 1 MEVNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKI-QNDRGDTAL 79 (523)
Q Consensus 1 ~~~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-~d~~G~TpL 79 (523)
|...+||.|+..|+.+.++.+++..+.. .+..|..|.||||+|+..|+.+++++|++.+++ .+++. +|..|.|||
T Consensus 1 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 1 MSNYPLHQACMENEFFKVQELLHSKPSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN---VNLDDYPDDSGWTPF 76 (228)
T ss_dssp --CCHHHHHHHTTCHHHHHHHHHHCGGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT---CCGGGCCCTTSCCHH
T ss_pred CCccHHHHHHHhCCHHHHHHHHhcCccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc---ccccccCCCCCCCHH
Confidence 5668999999999999999999986432 345799999999999999999999999998642 33555 889999999
Q ss_pred hHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccC
Q 041922 80 HLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSV 159 (523)
Q Consensus 80 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~ 159 (523)
|+|+..|+.+++++|+++|. ..+++.+|..|.||||.|+.
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~--------------------------------~~~~~~~~~~g~t~L~~A~~-------- 116 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPL--------------------------------KPDLNKITNQGVTCLHLAVG-------- 116 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSS--------------------------------CCCTTCCCTTCCCHHHHHHH--------
T ss_pred HHHHHcCCHHHHHHHHhCCC--------------------------------CcccccCCcCCCCHHHHHHH--------
Confidence 99999999999999999873 24557888999999998762
Q ss_pred CCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHH
Q 041922 160 PETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEK 235 (523)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~ 235 (523)
.+..++++.|+++ +.++..|.||||+|+..|+.+++++
T Consensus 117 --------------------------------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 117 --------------------------------------KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp --------------------------------------TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------------------------------cCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 1225688899887 6678899999999999999999999
Q ss_pred HHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHH-hccccCCccccccccccCCCCcHhHHHHHhC
Q 041922 236 ILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLL-DRKMLGESDLNIFEHVDIKGNSALHLAAKFG 302 (523)
Q Consensus 236 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll-~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 302 (523)
|++..+++++.+|.+|+||||+|+.+|+.+++++|+ +.|+ +++.+|.+|+||||+|+..+
T Consensus 159 Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga-------~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA-------EYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCC-------CSCCBCTTSCBGGGGCSSTT
T ss_pred HHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCccCCCCCcHHHHHHHHH
Confidence 999844999999999999999999999999999999 8899 99999999999999997653
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.8e-35 Score=273.57 Aligned_cols=207 Identities=19% Similarity=0.210 Sum_probs=188.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
++||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQA--GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA-----LVDPKDAEGSTCLHLAA 85 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-----CCCCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCcHHHHHHHHHc--CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCC-----CCCCCCCCCCcHHHHHH
Confidence 689999999999999999998 67778889999999999999999999999998763 58899999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|++.++ .+++..|..|.||||.|+.
T Consensus 86 ~~~~~~~~~~Ll~~~~---------------------------------~~~~~~~~~g~t~L~~A~~------------ 120 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQ---------------------------------MDVNCQDDGGWTPMIWATE------------ 120 (237)
T ss_dssp HTTCHHHHHHHHTTTC---------------------------------CCTTCCCTTSCCHHHHHHH------------
T ss_pred HcCCHHHHHHHHhCCC---------------------------------CCcccCCCCCCCHHHHHHH------------
Confidence 9999999999999872 3456788899999998762
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhh
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDT 239 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 239 (523)
.+..++++.|+++ +.++..|.||||+|+..|+.+++++|++.
T Consensus 121 ----------------------------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 166 (237)
T 3b7b_A 121 ----------------------------------YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAA 166 (237)
T ss_dssp ----------------------------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTT
T ss_pred ----------------------------------cCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 1225688888887 56778899999999999999999999997
Q ss_pred CCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCC
Q 041922 240 IPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEY 304 (523)
Q Consensus 240 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 304 (523)
+++++.+|..|+||||+|+.+++.+++++|+++|+ +++.+|++|+||||+|+..++.
T Consensus 167 -g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------d~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 167 -KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS-------DVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp -TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-------CTTCCCTTSCCHHHHSCTTCHH
T ss_pred -CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCC-------CCCccCCCCCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999 9999999999999999998874
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.2e-35 Score=278.61 Aligned_cols=204 Identities=20% Similarity=0.133 Sum_probs=175.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEec
Q 041922 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWS 115 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~ 115 (523)
+|+||||+|+..|+.+++++|++.+. +++.+|.+|.||||+|+..|+.+++++|+++|+++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-------------- 62 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW-----AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-------------- 62 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC-----CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--------------
Confidence 68999999999999999999999763 58999999999999999999999999999987654
Q ss_pred cCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchh
Q 041922 116 SGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDE 195 (523)
Q Consensus 116 ~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (523)
+.+|..|+||||.|+.
T Consensus 63 --------------------~~~~~~g~t~L~~A~~-------------------------------------------- 78 (261)
T 2xai_A 63 --------------------NGVTADWHTPLFNACV-------------------------------------------- 78 (261)
T ss_dssp --------------------TCCCTTSCCHHHHHHH--------------------------------------------
T ss_pred --------------------CCCCCCCCCHHHHHHH--------------------------------------------
Confidence 6778899999998862
Q ss_pred hhhHHHHHHHHHHhcc---cccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHh
Q 041922 196 TATAAVQELKFMKKKD---QQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLD 272 (523)
Q Consensus 196 ~~~~~~~~v~~Ll~~~---~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 272 (523)
.+..++++.|+++. ..+.+|.||||+|+..|+.+++++|++. |++++..|.+|+||||+|+.+|+.+++++|++
T Consensus 79 --~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 79 --SGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp --HTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred --cCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 22356899999882 2345699999999999999999999997 89999999999999999999999999999999
Q ss_pred ccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhh
Q 041922 273 RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTK 351 (523)
Q Consensus 273 ~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~ 351 (523)
+|+ ++|. |..|+||||+|+..++.+++ +.++..++ ++.+|.+|+||+|+|.+
T Consensus 156 ~g~-------~~~~-~~~g~t~Lh~A~~~~~~~~v-------------------~~Ll~~gad~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 156 SGA-------DVNQ-GKGQDSPLHAVARTASEELA-------------------CLLMDFGADTQAKNAEGKRPVELVPP 208 (261)
T ss_dssp HTC-------CTTC-CBTTBCHHHHHHHHTCHHHH-------------------HHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred cCC-------CCCC-CCCCCChHHHHHHcCCHHHH-------------------HHHHHcCCCCCCcCCCCCChhhhccc
Confidence 999 8885 89999999999999985543 22222233 58999999999999985
Q ss_pred h
Q 041922 352 T 352 (523)
Q Consensus 352 ~ 352 (523)
.
T Consensus 209 ~ 209 (261)
T 2xai_A 209 E 209 (261)
T ss_dssp T
T ss_pred c
Confidence 4
No 20
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2e-36 Score=304.82 Aligned_cols=249 Identities=14% Similarity=0.082 Sum_probs=204.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccC-CCCCcHHHHHHHcCCHHHHHHHHHHhcc---cccccccccccCCChHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGE---NASNVLKIQNDRGDTAL 79 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~-~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~---~~~~~~~~~d~~G~TpL 79 (523)
.+||.|+..| .+.++.++. .+++..| ..|+||||+||..|+.+++++|+..... ....++|.+|.+|.|||
T Consensus 96 t~L~~Aa~~~-~~~~~~L~~----~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL 170 (373)
T 2fo1_E 96 IKLHTEAAGS-YAITEPITR----ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPL 170 (373)
T ss_dssp CHHHHHHHSS-SCCCSCCST----TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHH
T ss_pred cHHHHHhcCC-chHHHHhcc----ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHH
Confidence 4688888854 455544433 2456677 7899999999999999999888742110 11256999999999999
Q ss_pred hHHHHcCCHHHHHHHHhcCcccccccCCCCc-eeEeccCCcccc-hhhhhhcCCccCCccCCCCCCCccccCCCCCCCCc
Q 041922 80 HLAAALGNEAMCHCMASKDRELISAADEGLA-NCSWSSGNLEDK-EHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTF 157 (523)
Q Consensus 80 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l~~~~~~~~v-~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~ 157 (523)
|+|+..|+.+++++|+++|++++..+..+.+ +++++..++.++ ++|+++...+.+++..|..|.||||.|+.
T Consensus 171 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~------ 244 (373)
T 2fo1_E 171 MLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH------ 244 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH------
T ss_pred HHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH------
Confidence 9999999999999999999999888777777 778877777764 88887622237899999999999998762
Q ss_pred cCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----c--------cccCCCChHHHHHH
Q 041922 158 SVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----D--------QQSGRKATPILIAA 225 (523)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~--------~~~~~g~tpLh~Aa 225 (523)
.+.....+++++|+++ + ..|..|.||||+|+
T Consensus 245 -------------------------------------~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~ 287 (373)
T 2fo1_E 245 -------------------------------------NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAA 287 (373)
T ss_dssp -------------------------------------SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHH
T ss_pred -------------------------------------hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHH
Confidence 1111245688888877 1 24668999999999
Q ss_pred HcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCC
Q 041922 226 KMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYG 305 (523)
Q Consensus 226 ~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~ 305 (523)
..|+.+++++|++..+++++.+|.+|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|+..|+.+
T Consensus 288 ~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-------d~~~~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 288 QVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA-------SVEAVDATDHTARQLAQANNHHN 360 (373)
T ss_dssp SSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-------CSSCCCSSSCCHHHHHHHTTCHH
T ss_pred HhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CccCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999998779999999999999999999999999999999999 99999999999999999999966
Q ss_pred Cc
Q 041922 306 PW 307 (523)
Q Consensus 306 ~~ 307 (523)
++
T Consensus 361 iv 362 (373)
T 2fo1_E 361 IV 362 (373)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 21
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-35 Score=281.70 Aligned_cols=238 Identities=19% Similarity=0.198 Sum_probs=204.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhccccccccccc-ccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCc-eeE
Q 041922 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQ-NDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLA-NCS 113 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~-d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l 113 (523)
+|+||||.|++.|+.+++++|++.+. +++.+ +..|.||||+|+..|+.+++++|+++|++++..+..+.+ +++
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGA-----NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC-----CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 58899999999999999999999864 36666 888999999999999999999999999999888777777 777
Q ss_pred eccCCcccc-hhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCc
Q 041922 114 WSSGNLEDK-EHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNA 192 (523)
Q Consensus 114 ~~~~~~~~v-~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (523)
++..++.++ ++|+++ +++++.+|..|.||||.|+.
T Consensus 79 A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~----------------------------------------- 114 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSK---GADVNECDFYGFTAFMEAAV----------------------------------------- 114 (285)
T ss_dssp HHHHTCHHHHHHHHHT---TCCTTCBCTTCCBHHHHHHH-----------------------------------------
T ss_pred HHHcCCHHHHHHHHHc---CCCCCccCcccCCHHHHHHH-----------------------------------------
Confidence 777777764 888887 89999999999999998762
Q ss_pred chhhhhHHHHHHHHHHhc----ccc----------cCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHH
Q 041922 193 RDETATAAVQELKFMKKK----DQQ----------SGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLA 258 (523)
Q Consensus 193 ~~~~~~~~~~~v~~Ll~~----~~~----------~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 258 (523)
.+..+++++|+++ +.. +..|.||||+|+..|+.+++++|++.+|.+++..|..|+||||+|
T Consensus 115 -----~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a 189 (285)
T 1wdy_A 115 -----YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 189 (285)
T ss_dssp -----TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHH
T ss_pred -----hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 1224577888776 222 677999999999999999999999988999999999999999999
Q ss_pred HHcCc----hhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCC-cc
Q 041922 259 VENRQ----TGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMP-RY 333 (523)
Q Consensus 259 ~~~~~----~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~-~~ 333 (523)
+..++ .+++++|+++|+ ++|.+|.+|+||||+|+..|+.+++ +.++. .+
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~-------~~~~~~~~g~t~L~~A~~~~~~~~v-------------------~~Ll~~~g 243 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGA-------DVNVRGERGKTPLILAVEKKHLGLV-------------------QRLLEQEH 243 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTC-------CSSCCCTTSCCHHHHHHHTTCHHHH-------------------HHHHHSSS
T ss_pred HHccccchHHHHHHHHHHcCC-------CCCCcCCCCCcHHHHHHHcCCHHHH-------------------HHHHhccC
Confidence 99999 899999999999 9999999999999999999985542 22222 22
Q ss_pred c-ccccCCCCCChhHHhhhhh
Q 041922 334 F-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 334 ~-~~~~n~~G~Tpl~la~~~~ 353 (523)
. ++.+|.+|+||+++|.+..
T Consensus 244 ~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 244 IEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccccCCCCCcHHHHHHHcC
Confidence 2 5889999999999999764
No 22
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.3e-35 Score=292.98 Aligned_cols=262 Identities=13% Similarity=0.046 Sum_probs=206.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.||..|+.+.++.|++. +.+++..|..|.||||+|+..|+.++|++|++.+. +..+.+|.||||+|+
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-------~~~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE-------VHSLWHGQKPIHLAV 92 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-------CCCCBTTBCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-------CccccCCCCHHHHHH
Confidence 579999999999999999998 67788899999999999999999999999999864 334468999999999
Q ss_pred HcCCHHHHHHHHhc----CcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccC
Q 041922 84 ALGNEAMCHCMASK----DRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSV 159 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~----~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~ 159 (523)
..|+.+++++|++. |.+++.......... -...+.+.+|..|.||||.|+.
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~g~t~L~~A~~-------- 147 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQMPESLLNECDERE-----------------VNEIGSHVKHCKGQTALHWCVG-------- 147 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCC-----------------EEEETTEEEEESCCCHHHHHHH--------
T ss_pred HcCCHHHHHHHHHhccccCCCHHHHHhhcchHh-----------------hhhhccccCCCCCCCHHHHHHH--------
Confidence 99999999999999 555433211111100 0123446688999999998862
Q ss_pred CCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHH
Q 041922 160 PETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEK 235 (523)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~ 235 (523)
.+ ....+++++|+++ +..|..|.||||+|+..|+.+++++
T Consensus 148 -----------------------------------~g-~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~ 191 (364)
T 3ljn_A 148 -----------------------------------LG-PEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDL 191 (364)
T ss_dssp -----------------------------------SC-GGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -----------------------------------cC-CchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 11 0035699999988 6778899999999999999999999
Q ss_pred HHhhCCCc-----ccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCC
Q 041922 236 ILDTIPVA-----IHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIP 310 (523)
Q Consensus 236 Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~ 310 (523)
|++. +++ ++..|..|+||||+|+.+|+.+++++|+++|+ ++|.+|.+|+||||+|+..|+.+++...
T Consensus 192 Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------d~~~~d~~g~tpL~~A~~~g~~~~v~~L 263 (364)
T 3ljn_A 192 MMDT-VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI-------DVNMEDNEHTVPLYLSVRAAMVLLTKEL 263 (364)
T ss_dssp HHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC-------CTTCCCTTSCCHHHHHHHTCCHHHHHHH
T ss_pred HHhc-ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-------CCCCCCCCCCCHHHHHHHhChHHHHHHH
Confidence 9998 677 99999999999999999999999999999999 9999999999999999999997654210
Q ss_pred ---cchhhhHHHhHHHHHHHh-hCCcccccccCCCCCChhHHhhhhh
Q 041922 311 ---GAALQMQWEIKWYKFVKE-SMPRYFFLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 311 ---g~~l~~~~~~~~~~~v~~-~~~~~~~~~~n~~G~Tpl~la~~~~ 353 (523)
|+... +.. ..........+..|.||+..|....
T Consensus 264 l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 264 LQKTDVFL----------IQACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp HHHSCHHH----------HHTCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred HHcCCchh----------hhcCcccCcccccccccccccchhhhhcc
Confidence 11110 000 0011113456788899998877653
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2e-34 Score=269.44 Aligned_cols=207 Identities=15% Similarity=0.136 Sum_probs=177.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEecc
Q 041922 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSS 116 (523)
Q Consensus 37 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~ 116 (523)
|+||||+|+..|+.++++.|++.+. ...+.+|.+|+||||+|+..|+.+++++|++.|++.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--------------- 62 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKP----SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV--------------- 62 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCG----GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTC---------------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCc----cccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccc---------------
Confidence 7899999999999999999999864 346668999999999999999999999999998533
Q ss_pred CCcccchhhhhhcCCccCCcc-CCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchh
Q 041922 117 GNLEDKEHHREKRGTYMGLSS-NDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDE 195 (523)
Q Consensus 117 ~~~~~v~~l~~~~~~~~~l~~-~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (523)
+++. .|..|+||||.|+.
T Consensus 63 -----------------~~~~~~~~~g~t~L~~A~~-------------------------------------------- 81 (228)
T 2dzn_A 63 -----------------NLDDYPDDSGWTPFHIACS-------------------------------------------- 81 (228)
T ss_dssp -----------------CGGGCCCTTSCCHHHHHHH--------------------------------------------
T ss_pred -----------------cccccCCCCCCCHHHHHHH--------------------------------------------
Confidence 3344 78899999998862
Q ss_pred hhhHHHHHHHHHHhc------ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHH
Q 041922 196 TATAAVQELKFMKKK------DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKL 269 (523)
Q Consensus 196 ~~~~~~~~v~~Ll~~------~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~ 269 (523)
.+..++++.|+++ +..+..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.+|+.+++++
T Consensus 82 --~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 82 --VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp --HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 2235688888876 45677899999999999999999999997 89999999999999999999999999999
Q ss_pred HHhcc-ccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhC-Cccc-ccccCCCCCChh
Q 041922 270 LLDRK-MLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESM-PRYF-FLGYNNKGKTPK 346 (523)
Q Consensus 270 Ll~~~-~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~-~~~~-~~~~n~~G~Tpl 346 (523)
|+++| + ++|.+|.+|+||||+|+..++.+++ +.++ ..++ ++.+|.+|+||+
T Consensus 159 Ll~~g~~-------~~~~~d~~g~t~L~~A~~~~~~~~v-------------------~~Ll~~~ga~~~~~~~~g~t~l 212 (228)
T 2dzn_A 159 LCGLGKS-------AVNWQDKQGWTPLFHALAEGHGDAA-------------------VLLVEKYGAEYDLVDNKGAKAE 212 (228)
T ss_dssp HHTTTCC-------CSCCCCTTSCCHHHHHHHTTCHHHH-------------------HHHHHHHCCCSCCBCTTSCBGG
T ss_pred HHhcCcc-------cccCcCCCCCCHHHHHHHcCCHHHH-------------------HHHHHhcCCCCCccCCCCCcHH
Confidence 99999 6 9999999999999999999986543 2222 2222 589999999999
Q ss_pred HHhhhh
Q 041922 347 EIFTKT 352 (523)
Q Consensus 347 ~la~~~ 352 (523)
++|.+.
T Consensus 213 ~~A~~~ 218 (228)
T 2dzn_A 213 DVALNE 218 (228)
T ss_dssp GGCSST
T ss_pred HHHHHH
Confidence 999764
No 24
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3e-34 Score=285.83 Aligned_cols=235 Identities=14% Similarity=0.090 Sum_probs=198.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.|++. +.+++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGA-----CVNAMDLWQFTPLHEAA 132 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHH
Confidence 589999999999999999998 67788899999999999999999999999999864 58999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCc-eeEeccCCccc----------------------chhhhhhcCCccCCccCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLA-NCSWSSGNLED----------------------KEHHREKRGTYMGLSSNDD 140 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l~l~~~~~~~~----------------------v~~l~~~~~~~~~l~~~d~ 140 (523)
..|+.+++++|+++|+++...+..+.+ ++++...+... +..++.. .......+.
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~ 209 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAL---EIINFKQPQ 209 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTT---CCTTCCCTT
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHh---hcccccCCC
Confidence 999999999999999998877766655 33332211111 1122221 223345678
Q ss_pred CCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCC
Q 041922 141 HGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGR 216 (523)
Q Consensus 141 ~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~ 216 (523)
.|.||||.|+ ...+....++++.|+++ +.++..
T Consensus 210 ~~~t~L~~A~-------------------------------------------~~~~~~~~~~~~~Ll~~g~~~~~~~~~ 246 (351)
T 3utm_A 210 SHETALHCAV-------------------------------------------ASLHPKRKQVAELLLRKGANVNEKNKD 246 (351)
T ss_dssp TCCCHHHHHH-------------------------------------------HCCSTTHHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCHHHHHH-------------------------------------------HHhCccHHHHHHHHHHcCCCcCCcCCC
Confidence 8999999876 22334456788999887 677889
Q ss_pred CChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhH
Q 041922 217 KATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALH 296 (523)
Q Consensus 217 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH 296 (523)
|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||+|
T Consensus 247 g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------d~~~~~~~g~tal~ 318 (351)
T 3utm_A 247 FMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS-------DPSIISLQGFTAAQ 318 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC-------CCCCcCCCCCChhh
Confidence 99999999999999999999997 89999999999999999999999999999999999 99999999999999
Q ss_pred HHH
Q 041922 297 LAA 299 (523)
Q Consensus 297 ~Aa 299 (523)
+|.
T Consensus 319 ~a~ 321 (351)
T 3utm_A 319 MGN 321 (351)
T ss_dssp HSC
T ss_pred hhh
Confidence 984
No 25
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.6e-34 Score=286.79 Aligned_cols=240 Identities=19% Similarity=0.195 Sum_probs=193.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhccccccccccccc-CCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCc-e
Q 041922 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQND-RGDTALHLAAALGNEAMCHCMASKDRELISAADEGLA-N 111 (523)
Q Consensus 34 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~-l 111 (523)
+.+|+||||.|++.|+.++|++||+.|+ ++|.+|. .|+||||+|++.|+.++|++|+++|++++..+..+.+ +
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Ga-----dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGA-----NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTC-----CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCC-----CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchh
Confidence 4458899999999999999999999874 4888875 5999999999999999999999999999887776666 4
Q ss_pred eEeccCCcccc-hhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCC
Q 041922 112 CSWSSGNLEDK-EHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDG 190 (523)
Q Consensus 112 ~l~~~~~~~~v-~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (523)
+.+........ ..++.. +.+++.+|..|.||||.|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~---~~~~~~~d~~g~t~l~~A~~--------------------------------------- 134 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSK---GADVNECDFYGFTAFMEAAV--------------------------------------- 134 (337)
T ss_dssp HHHHHHTCHHHHHHHHTT---TCCTTCBCTTCCBHHHHHHH---------------------------------------
T ss_pred HHHHhcccchhhHHhhhc---cchhhhhccCCCCHHHHHHH---------------------------------------
Confidence 44444444433 555554 88999999999999998762
Q ss_pred CcchhhhhHHHHHHHHHHhc--------------ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHH
Q 041922 191 NARDETATAAVQELKFMKKK--------------DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVL 256 (523)
Q Consensus 191 ~~~~~~~~~~~~~v~~Ll~~--------------~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 256 (523)
.+..++++.|+++ ...+..|.||||+|+..|+.+++++||++.|++++.+|..|+|++|
T Consensus 135 -------~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~ 207 (337)
T 4g8k_A 135 -------YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 207 (337)
T ss_dssp -------TTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred -------cCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHH
Confidence 1123466666655 2345679999999999999999999998879999999999999999
Q ss_pred HHHHcCc----hhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCC-
Q 041922 257 LAVENRQ----TGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMP- 331 (523)
Q Consensus 257 ~A~~~~~----~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~- 331 (523)
.++..++ .+++++|+++|+ ++|.+|.+|+||||+|+..|+.+++ +.++.
T Consensus 208 ~~~~~~~~~~~~~i~~lLl~~ga-------d~n~~d~~g~t~L~~a~~~~~~~~v-------------------~~Ll~~ 261 (337)
T 4g8k_A 208 HALLSSDDSDVEAITHLLLDHGA-------DVNVRGERGKTPLILAVEKKHLGLV-------------------QRLLEQ 261 (337)
T ss_dssp HHHHHSCTTTHHHHHHHHHHTTC-------CTTCCCGGGCCHHHHHHHTTCHHHH-------------------HHHHTS
T ss_pred HHHHHcCcccHHHHHHHHHHCCC-------CCCCcCCCCCCHHHHHHHhhhhHHH-------------------HHHHHh
Confidence 8887654 358899999999 9999999999999999999985432 22222
Q ss_pred ccc-ccccCCCCCChhHHhhhhh
Q 041922 332 RYF-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 332 ~~~-~~~~n~~G~Tpl~la~~~~ 353 (523)
.+. ++.+|.+|+|||++|.+..
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELK 284 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTT
T ss_pred cCCcccCcCCCCCCHHHHHHHcC
Confidence 122 6899999999999998753
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1e-34 Score=283.03 Aligned_cols=240 Identities=17% Similarity=0.194 Sum_probs=199.4
Q ss_pred HHHHcCCHHHHHHHHHcCCCccc-------cccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHh
Q 041922 8 KFAMRGQWDNFVQAYENNPMSRE-------AKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALH 80 (523)
Q Consensus 8 ~Aa~~g~~~~v~~ll~~~~~~~~-------~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh 80 (523)
.++..|..+.++.++...+.... ...+..|.||||.||..|+.++|++|++.+. +++.+|.+|.||||
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~ 78 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA-----DINYANVDGLTALH 78 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC-----CTTCBCTTCCBHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC-----CCcccCCCCCCHHH
Confidence 47888899999999987544221 1234467899999999999999999999864 48999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCC
Q 041922 81 LAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVP 160 (523)
Q Consensus 81 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l 160 (523)
+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 79 ~A~~~g~~~~v~~Ll~~ga~~----------------------------------~~~~~~g~tpL~~A~~--------- 115 (299)
T 1s70_B 79 QACIDDNVDMVKFLVENGANI----------------------------------NQPDNEGWIPLHAAAS--------- 115 (299)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT----------------------------------TCCCTTSCCHHHHHHH---------
T ss_pred HHHHcCCHHHHHHHHHCCCCC----------------------------------CCCCCCCCcHHHHHHH---------
Confidence 999999999999999987654 6778899999998862
Q ss_pred CCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHH
Q 041922 161 ETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKI 236 (523)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~L 236 (523)
.+..+++++|+++ +..+..|.||||+|+..|+.++++.+
T Consensus 116 -------------------------------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l 158 (299)
T 1s70_B 116 -------------------------------------CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158 (299)
T ss_dssp -------------------------------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHH
T ss_pred -------------------------------------cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHH
Confidence 2235689999987 56778999999999999999999998
Q ss_pred HhhCCCcccc--------------------------cccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCC
Q 041922 237 LDTIPVAIHD--------------------------LDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIK 290 (523)
Q Consensus 237 l~~~~~~~~~--------------------------~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~ 290 (523)
+...+.+++. .+..|.||||+|+.+|+.+++++|+++|+ ++|.+|.+
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-------d~~~~d~~ 231 (299)
T 1s70_B 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY-------DVNIKDYD 231 (299)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC-------CTTCCCTT
T ss_pred HhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC-------CCCCcCCC
Confidence 8776666543 56789999999999999999999999999 99999999
Q ss_pred CCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhhhhhHHh
Q 041922 291 GNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKTHKELVK 358 (523)
Q Consensus 291 G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~~~~l~~ 358 (523)
|+||||+|+..|+.+++ +.++..++ ++.+|..|+||+++|.+...+.++
T Consensus 232 g~tpL~~A~~~~~~~~v-------------------~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~ 281 (299)
T 1s70_B 232 GWTPLHAAAHWGKEEAC-------------------RILVENLCDMEAVNKVGQTAFDVADEDILGYLE 281 (299)
T ss_dssp CCCHHHHHHHTTCHHHH-------------------HHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred CCcHHHHHHhcCCHHHH-------------------HHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999986543 22223333 588999999999999876555443
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=275.66 Aligned_cols=201 Identities=14% Similarity=0.119 Sum_probs=181.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+++.+|.+|.||||+|+..|+.+++++|++.+ .+++.+|.+|.||||+|+
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHG-----AQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCSSCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHH
Confidence 579999999999999999998 6678889999999999999999999999999986 358999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|++.|++++ . +.+|.||||.|+.
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~----------------------------------~-~~~g~t~L~~A~~------------ 166 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASVQ----------------------------------P-ESDLASPIHEAAR------------ 166 (285)
T ss_dssp HHTCHHHHHHHHHTTCCSS----------------------------------C-SCTTSCHHHHHHH------------
T ss_pred HcCHHHHHHHHHHCCCCCC----------------------------------C-CCCCCCHHHHHHH------------
Confidence 9999999999999987652 1 3359999998762
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhh
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDT 239 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 239 (523)
.+..++++.|+++ +.+|..|.||||+|+..|+.+++++|++.
T Consensus 167 ----------------------------------~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 167 ----------------------------------RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp ----------------------------------HTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------------------------------cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 2235688889887 66788999999999999999999999997
Q ss_pred CCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHh
Q 041922 240 IPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKF 301 (523)
Q Consensus 240 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~ 301 (523)
+++++. |..|+||||+|+.+++.+++++|+++|+ +++.+|.+|+||||+|+..
T Consensus 213 -ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------d~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 213 -GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGA-------DTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp -TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCGGGGSCTT
T ss_pred -CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCC-------CCCCcCCCCCCHHHHhcCc
Confidence 899985 8999999999999999999999999999 9999999999999999943
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=275.34 Aligned_cols=215 Identities=16% Similarity=0.139 Sum_probs=154.3
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhccc---ccccccccccCCChHHhHHHHcCCHH-HHHHHHhcCcccccccCC
Q 041922 32 KLTRSGDTALHIAAAAGQTNIVSELVEIMGEN---ASNVLKIQNDRGDTALHLAAALGNEA-MCHCMASKDRELISAADE 107 (523)
Q Consensus 32 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~---~~~~~~~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~~~~~~~~~~~ 107 (523)
.+|..+.||||.||..|+.++|++|++.+... ....++..|..|.||||.|+..++.+ ++++|++.|++
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad------- 78 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG------- 78 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC-------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-------
Confidence 46778889999999999999999999876531 12346788899999999999888764 78888887654
Q ss_pred CCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhc
Q 041922 108 GLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHN 187 (523)
Q Consensus 108 ~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (523)
+|.+|.+|+||||+|+..
T Consensus 79 ---------------------------vn~~d~~G~TpLh~A~~~----------------------------------- 96 (269)
T 4b93_B 79 ---------------------------VNVTSQDGSSPLHVAALH----------------------------------- 96 (269)
T ss_dssp ---------------------------TTCCCTTSCCHHHHHHHT-----------------------------------
T ss_pred ---------------------------CCCcCCCCCCHHHHHHHc-----------------------------------
Confidence 478899999999988731
Q ss_pred cCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCc
Q 041922 188 KDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQ 263 (523)
Q Consensus 188 ~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~ 263 (523)
++ .+++++|++. +..+.+|.||+|.|+..++.++++.|++. |++++.+|.+|+||||+|+.+|+
T Consensus 97 --------g~---~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 97 --------GR---ADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp --------TC---TTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTC
T ss_pred --------Cc---HHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCC
Confidence 12 3488888887 56778899999999999999999999997 89999999999999999999999
Q ss_pred hhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCC
Q 041922 264 TGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKG 342 (523)
Q Consensus 264 ~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G 342 (523)
.+++++|+++|+ ++|.+|..|+||||+|+..|+.+++ +.++..++ ++.+|++|
T Consensus 165 ~~~v~~Ll~~ga-------dvn~~~~~g~t~Lh~A~~~g~~~~v-------------------~~Ll~~Gad~~~~d~~G 218 (269)
T 4b93_B 165 HELVALLLQHGA-------SINASNNKGNTALHEAVIEKHVFVV-------------------ELLLLHGASVQVLNKRQ 218 (269)
T ss_dssp GGGHHHHHHTTC-------CTTCBCTTSCBHHHHHHHTTCHHHH-------------------HHHHHTTCCSCCCCTTS
T ss_pred HHHHHHHHHCCC-------CCCccccCCCcHHHHHHHcCCHHHH-------------------HHHHHCCCCCCCcCCCC
Confidence 999999999999 9999999999999999999996543 22333333 68999999
Q ss_pred CChhHHhhhhh
Q 041922 343 KTPKEIFTKTH 353 (523)
Q Consensus 343 ~Tpl~la~~~~ 353 (523)
+||+|+|.+..
T Consensus 219 ~TpL~~A~~~~ 229 (269)
T 4b93_B 219 RTAVDCAEQNS 229 (269)
T ss_dssp CCSGGGSCTTC
T ss_pred CCHHHHHHhCC
Confidence 99999998643
No 29
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.2e-34 Score=286.28 Aligned_cols=219 Identities=20% Similarity=0.170 Sum_probs=179.1
Q ss_pred CCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccc
Q 041922 25 NPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISA 104 (523)
Q Consensus 25 ~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ 104 (523)
.|..+.+..|.+|.||||+||..|+.++|++|++.+. +++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 8 ~~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--- 79 (364)
T 3ljn_A 8 FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGV-----SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH--- 79 (364)
T ss_dssp --------CCHHHHHHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---
T ss_pred ccCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---
Confidence 3456677889999999999999999999999999863 58999999999999999999999999999998743
Q ss_pred cCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHH
Q 041922 105 ADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVA 184 (523)
Q Consensus 105 ~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (523)
.+.+|.||||.|+.
T Consensus 80 ---------------------------------~~~~g~t~L~~A~~--------------------------------- 93 (364)
T 3ljn_A 80 ---------------------------------SLWHGQKPIHLAVM--------------------------------- 93 (364)
T ss_dssp ---------------------------------CCBTTBCHHHHHHH---------------------------------
T ss_pred ---------------------------------cccCCCCHHHHHHH---------------------------------
Confidence 22468999998762
Q ss_pred hhccCCCcchhhhhHHHHHHHHHHhc-------------------------ccccCCCChHHHHHHHcC--hHHHHHHHH
Q 041922 185 VHNKDGNARDETATAAVQELKFMKKK-------------------------DQQSGRKATPILIAAKMG--VTEMVEKIL 237 (523)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~v~~Ll~~-------------------------~~~~~~g~tpLh~Aa~~g--~~~~v~~Ll 237 (523)
. +..++++.|+++ +..+..|.||||+|+..| +.+++++|+
T Consensus 94 ----------~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll 160 (364)
T 3ljn_A 94 ----------A---NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILV 160 (364)
T ss_dssp ----------T---TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHH
T ss_pred ----------c---CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHH
Confidence 1 123466666664 126678999999999999 999999999
Q ss_pred hhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcccc-CCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhh
Q 041922 238 DTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKML-GESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQM 316 (523)
Q Consensus 238 ~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~-~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~ 316 (523)
+. |++++..|..|+||||+|+.+|+.+++++|+++|+. ... ++|.+|..|+||||+|+..|+.++
T Consensus 161 ~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~~~~~~~~g~t~L~~A~~~g~~~~---------- 226 (364)
T 3ljn_A 161 QL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL---RLDYANKQGNSHLHWAILINWEDV---------- 226 (364)
T ss_dssp HH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSC---CTTCCCTTCCCTTHHHHTTTCHHH----------
T ss_pred Hc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc---cccccCCCCCcHHHHHHHcCCHHH----------
Confidence 98 899999999999999999999999999999999982 011 299999999999999999998554
Q ss_pred HHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhhh
Q 041922 317 QWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 317 ~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~~ 353 (523)
++.++..++ ++.+|.+|+||+++|.+..
T Consensus 227 ---------v~~Ll~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 227 ---------AMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp ---------HHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred ---------HHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 333444444 6899999999999999764
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=9.3e-35 Score=292.62 Aligned_cols=266 Identities=11% Similarity=0.080 Sum_probs=197.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCc----------------------cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhc
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMS----------------------REAKLTRSGDTALHIAAAAGQTNIVSELVEIMG 61 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~----------------------~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~ 61 (523)
.+|+.++..|+.+.++.++.+.... ..+..+..|.||||+|+..|. ++++.|+.
T Consensus 39 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~--- 114 (373)
T 2fo1_E 39 HSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSY-AITEPITR--- 114 (373)
T ss_dssp -------------------------------------------------------CCCHHHHHHHSSS-CCCSCCST---
T ss_pred cccccccCCccccchhhhhhhhccccCccccCCCCCccccccccccccccCCCCCCccHHHHHhcCCc-hHHHHhcc---
Confidence 4567777777777666555332111 123567889999999999654 78877754
Q ss_pred ccccccccccc-cCCChHHhHHHHcCCHHHHHHHH--------hcCcccccccCCCCc-eeEeccCCcccc-hhhhhhcC
Q 041922 62 ENASNVLKIQN-DRGDTALHLAAALGNEAMCHCMA--------SKDRELISAADEGLA-NCSWSSGNLEDK-EHHREKRG 130 (523)
Q Consensus 62 ~~~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll--------~~~~~~~~~~~~~~~-l~l~~~~~~~~v-~~l~~~~~ 130 (523)
..++.+| ..|+||||+|+..|+.+++++|+ +.|++++..+..+.+ +++++..++.++ ++|+++
T Consensus 115 ----~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-- 188 (373)
T 2fo1_E 115 ----ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKA-- 188 (373)
T ss_dssp ----TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--
T ss_pred ----ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHC--
Confidence 3488888 79999999999999988877776 889999988888877 888888888774 899988
Q ss_pred CccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc
Q 041922 131 TYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK 210 (523)
Q Consensus 131 ~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~ 210 (523)
+++++.+|..|.||||.|+. .+..+++++|+++
T Consensus 189 -ga~~~~~~~~g~t~L~~A~~----------------------------------------------~g~~~~v~~Ll~~ 221 (373)
T 2fo1_E 189 -GADPTIYNKSERSALHQAAA----------------------------------------------NRDFGMMVYMLNS 221 (373)
T ss_dssp -TCCSCCCCTTCCCHHHHHHH----------------------------------------------TTCHHHHHHHTTS
T ss_pred -CCCCcccCCCCCCHHHHHHH----------------------------------------------CCCHHHHHHHHhc
Confidence 89999999999999998872 1224588888865
Q ss_pred -------ccccCCCChHHHHHHHcC---hHHHHHHHHhhCCCcccc--------cccCCCcHHHHHHHcCchhHHHHHHh
Q 041922 211 -------DQQSGRKATPILIAAKMG---VTEMVEKILDTIPVAIHD--------LDSEKKNLVLLAVENRQTGIYKLLLD 272 (523)
Q Consensus 211 -------~~~~~~g~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~--------~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 272 (523)
+..|..|.||||+|+..| +.+++++|++. +++++. .|..|+||||+|+.+|+.+++++|++
T Consensus 222 ~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 300 (373)
T 2fo1_E 222 TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300 (373)
T ss_dssp HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence 556789999999999998 99999999998 788875 67799999999999999999999998
Q ss_pred cc-ccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhh
Q 041922 273 RK-MLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFT 350 (523)
Q Consensus 273 ~~-~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~ 350 (523)
++ + ++|.+|.+|+||||+|+..|+.+++ +.++..++ ++.+|.+|+||+++|.
T Consensus 301 ~~~~-------~~n~~d~~g~TpL~~A~~~g~~~iv-------------------~~Ll~~gad~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 301 EKGS-------NKDKQDEDGKTPIMLAAQEGRIEVV-------------------MYLIQQGASVEAVDATDHTARQLAQ 354 (373)
T ss_dssp HSCC-------CTTCCCTTCCCHHHHHHHHTCHHHH-------------------HHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred hcCC-------CccCcCCCCCCHHHHHHHcCCHHHH-------------------HHHHHcCCCccCCCCCCCCHHHHHH
Confidence 87 6 9999999999999999999996543 22233333 5889999999999999
Q ss_pred hhh
Q 041922 351 KTH 353 (523)
Q Consensus 351 ~~~ 353 (523)
+..
T Consensus 355 ~~g 357 (373)
T 2fo1_E 355 ANN 357 (373)
T ss_dssp HTT
T ss_pred HcC
Confidence 764
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.1e-34 Score=270.99 Aligned_cols=216 Identities=15% Similarity=0.182 Sum_probs=167.3
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCce
Q 041922 32 KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLAN 111 (523)
Q Consensus 32 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l 111 (523)
.+|.+|+||||+|+..|+.++++.|++.+... +.+++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------- 71 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGD-LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP---------- 71 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS----------
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhcc-HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----------
Confidence 56788899999999999988888888876421 2358888888999999999999999998888876544
Q ss_pred eEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCC
Q 041922 112 CSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGN 191 (523)
Q Consensus 112 ~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (523)
+.+|..|+||||+|+.
T Consensus 72 ------------------------~~~~~~g~t~L~~A~~---------------------------------------- 87 (236)
T 1ikn_D 72 ------------------------ELRDFRGNTPLHLACE---------------------------------------- 87 (236)
T ss_dssp ------------------------CCCCTTCCCHHHHHHH----------------------------------------
T ss_pred ------------------------CCcCCCCCCHHHHHHH----------------------------------------
Confidence 6677888888887761
Q ss_pred cchhhhhHHHHHHHHHHhc----------ccccCCCChHHHHHHHcChHHHHHHHHhhCCCccccccc-CCCcHHHHHHH
Q 041922 192 ARDETATAAVQELKFMKKK----------DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDS-EKKNLVLLAVE 260 (523)
Q Consensus 192 ~~~~~~~~~~~~v~~Ll~~----------~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~ 260 (523)
.+..++++.|+++ +..+..|.||||+|+..|+.+++++|++. |++++.+|. .|+||||+|+.
T Consensus 88 ------~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 88 ------QGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp ------HTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHH
T ss_pred ------cCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHH
Confidence 1224477777764 34567899999999999999999999998 899999997 99999999999
Q ss_pred cCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCcccccccCC
Q 041922 261 NRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYFFLGYNN 340 (523)
Q Consensus 261 ~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~~~~~n~ 340 (523)
.|+.+++++|+++|+ +++.+|..|+||||+|+..++.+++ +.+.+.-........|.
T Consensus 161 ~~~~~~v~~Ll~~ga-------~~~~~~~~g~tpl~~A~~~~~~~~~----------------~~Ll~~ga~~~~~~~~~ 217 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGA-------DVNRVTYQGYSPYQLTWGRPSTRIQ----------------QQLGQLTLENLQMLPES 217 (236)
T ss_dssp TTCHHHHHHHHTTTC-------CSCCCCTTCCCGGGGCTTSSCHHHH----------------HHHHTTSCGGGSSCCCC
T ss_pred cCCHHHHHHHHHcCC-------CCCcccCCCCCHHHHHHccCchHHH----------------HHHHHcchhhhhcCCcc
Confidence 999999999999999 9999999999999999999985543 11111112122468899
Q ss_pred CCCChhHHhhhh
Q 041922 341 KGKTPKEIFTKT 352 (523)
Q Consensus 341 ~G~Tpl~la~~~ 352 (523)
+|+||.+...+.
T Consensus 218 ~~~~~~~~~~~~ 229 (236)
T 1ikn_D 218 EDEESYDTESEF 229 (236)
T ss_dssp CTTTCCCCC---
T ss_pred chHHHHhhhccc
Confidence 999999987654
No 32
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-32 Score=243.39 Aligned_cols=156 Identities=25% Similarity=0.300 Sum_probs=144.9
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
|++|+.||..|+.+.|+.||+. +.+++.+|.+|+||||+|+..|+.++++.|++.+. +++.+|.+|+||||+|
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga-----d~~~~d~~g~TpLh~A 77 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIEN--GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA-----DVNAKDSDGRTPLHHA 77 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc-----chhhhccCCCCHHHHH
Confidence 7899999999999999999998 78889999999999999999999999999999864 5999999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
++.|+.+++++|+++|+++
T Consensus 78 ~~~g~~~~v~~Ll~~gadv------------------------------------------------------------- 96 (169)
T 4gpm_A 78 AENGHKEVVKLLISKGADV------------------------------------------------------------- 96 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCT-------------------------------------------------------------
T ss_pred HHcCCHHHHHHHHHCcCCC-------------------------------------------------------------
Confidence 9999999999999999876
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|.+|+||||+|+..|+.+++++|++. |+
T Consensus 97 ------------------------------------------------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-ga 127 (169)
T 4gpm_A 97 ------------------------------------------------NAKDSDGRTPLHHAAENGHKEVVKLLISK-GA 127 (169)
T ss_dssp ------------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ------------------------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 23455789999999999999999999997 89
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
+++.+|.+|+||||+|+++|+.+++++|+++|+
T Consensus 128 d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 128 DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 999999999999999999999999999999999
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4e-33 Score=259.66 Aligned_cols=200 Identities=16% Similarity=0.134 Sum_probs=173.1
Q ss_pred CCHHHHHHHHHcCCCcccc-ccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHH
Q 041922 13 GQWDNFVQAYENNPMSREA-KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMC 91 (523)
Q Consensus 13 g~~~~v~~ll~~~~~~~~~-~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv 91 (523)
|+.+.++.+++.. .+.+ ..|.+|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++
T Consensus 2 g~~~~i~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 2 DAPAVISDFIYQG--ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA-----DANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ---CCEETTEETT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHcC--CCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 5566666677663 3443 348899999999999999999999999864 4889999999999999999999999
Q ss_pred HHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCcccc
Q 041922 92 HCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQI 171 (523)
Q Consensus 92 ~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~ 171 (523)
++|++.++ .+++..|..|.||||.|+.
T Consensus 75 ~~Ll~~~~---------------------------------~~~~~~~~~g~t~L~~A~~-------------------- 101 (223)
T 2f8y_A 75 QILIRNRA---------------------------------TDLDARMHDGTTPLILAAR-------------------- 101 (223)
T ss_dssp HHHHHBTT---------------------------------SCTTCCCTTCCCHHHHHHH--------------------
T ss_pred HHHHHcCC---------------------------------CCcccCCCCCCcHHHHHHH--------------------
Confidence 99999874 2346778899999998762
Q ss_pred chhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCccccc
Q 041922 172 FQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDL 247 (523)
Q Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 247 (523)
....++++.|+++ +..+..|.||||+|+..|+.+++++|++. |++++.+
T Consensus 102 --------------------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~ 154 (223)
T 2f8y_A 102 --------------------------LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQ 154 (223)
T ss_dssp --------------------------HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCC
T ss_pred --------------------------hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCc
Confidence 2235688888887 66778899999999999999999999997 8999999
Q ss_pred ccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCC
Q 041922 248 DSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGP 306 (523)
Q Consensus 248 d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~ 306 (523)
|..|+||||+|+.+|+.+++++|+++|+ +++.+|..|+||||+|++.++.++
T Consensus 155 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 155 NNREETPLFLAAREGSYETAKVLLDHFA-------NRDITDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCC-------CCccccccCCCHHHHHHHhcchHH
Confidence 9999999999999999999999999999 999999999999999999998654
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=6.3e-32 Score=253.23 Aligned_cols=206 Identities=19% Similarity=0.158 Sum_probs=169.7
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
.++||.|+..|+.+.++.+++.. +.+++.+|..|+||||+|+..|+.+++++|++.+.+-.....+.+|.+|.||||+|
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 35799999999999999999874 56788899999999999999999999999999876422223477888999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|++++..+.. +.++...
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~------------------------------------~~~~~~~------------ 114 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATG------------------------------------SVFHYRP------------ 114 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCS------------------------------------GGGSCCT------------
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCC------------------------------------cceeecc------------
Confidence 9999999999999999877432211 1111111
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 115 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga 145 (232)
T 2rfa_A 115 ------------------------------------------------HNLIYYGEHPLSFAACVGSEEIVRLLIEH-GA 145 (232)
T ss_dssp ------------------------------------------------TCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TC
T ss_pred ------------------------------------------------cccccCCCCHHHHHHHcCCHHHHHHHHHC-CC
Confidence 33566799999999999999999999997 89
Q ss_pred cccccccCCCcHHHHHHHcCchhHH----HHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIY----KLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv----~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+++.+|.+|+||||+|+.+++.+++ ++|+++|+.... ....+.+|.+|+||||+|+..|+.+++
T Consensus 146 ~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~-~~~~~~~~~~g~tpl~~A~~~g~~~~v 213 (232)
T 2rfa_A 146 DIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHL-KSLELVPNNQGLTPFKLAGVEGNIVMF 213 (232)
T ss_dssp CTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSS-CCGGGCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhh-hhhhccCCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999999999999999988 999999982110 001178999999999999999997654
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.98 E-value=2.6e-32 Score=256.65 Aligned_cols=211 Identities=21% Similarity=0.173 Sum_probs=183.3
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
..+|+.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+.+ .....+..|.||||+|
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAI----VDQLGGDLNSTPLHWA 83 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCBTTTTBCHHHHH
T ss_pred chHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCc----chhhcCCcCCChhHHH
Confidence 4579999999999999999998 677788899999999999999999999999998642 2334456699999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|++.|+++ +.+|..|.||||.|+.
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~----------------------------------~~~~~~g~t~l~~A~~----------- 118 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADP----------------------------------SLIDGEGCSCIHLAAQ----------- 118 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCT----------------------------------TCCCTTSCCHHHHHHH-----------
T ss_pred HHcCCHHHHHHHHHcCCCC----------------------------------cccCCCCCCHHHHHHH-----------
Confidence 9999999999999987654 6678899999998762
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcCh-HHHHHHHH
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGV-TEMVEKIL 237 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~-~~~v~~Ll 237 (523)
.+..++++.|+++ +..+..|.||||+|+..++ .+++++|+
T Consensus 119 -----------------------------------~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 163 (240)
T 3eu9_A 119 -----------------------------------FGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163 (240)
T ss_dssp -----------------------------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHH
T ss_pred -----------------------------------cCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHH
Confidence 1224588888887 5677889999999997776 78889988
Q ss_pred hhCCCccccccc-CCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 238 DTIPVAIHDLDS-EKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 238 ~~~~~~~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+. +.+++..+. .|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|++.++.+++
T Consensus 164 ~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------~~~~~~~~g~t~l~~A~~~~~~~~v 226 (240)
T 3eu9_A 164 TF-NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA-------NVDAQNIKGESALDLAKQRKNVWMI 226 (240)
T ss_dssp HT-TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC-------CTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred hc-CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC-------CCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 86 899999997 99999999999999999999999999 9999999999999999999996543
No 36
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=1.1e-31 Score=245.66 Aligned_cols=183 Identities=20% Similarity=0.227 Sum_probs=159.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhH
Q 041922 2 EVNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHL 81 (523)
Q Consensus 2 ~~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 81 (523)
+.++|+.|+..|+.+.++.++.+. +.+++..|.+|.||||+|+..|+.+++++|++.|. +++.+|..|.||||+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA-----DINLQNSISDSPYLY 78 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHH
Confidence 357899999999999999999875 34677888999999999999999999999998764 488899999999999
Q ss_pred HHHcCCHHHHHHHHhcCc-ccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCC
Q 041922 82 AAALGNEAMCHCMASKDR-ELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVP 160 (523)
Q Consensus 82 A~~~g~~~iv~~Ll~~~~-~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l 160 (523)
|+..|+.+++++|++.+. ++
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~----------------------------------------------------------- 99 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDL----------------------------------------------------------- 99 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCT-----------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhccCccc-----------------------------------------------------------
Confidence 999999999999995542 22
Q ss_pred CCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhC
Q 041922 161 ETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTI 240 (523)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~ 240 (523)
+..+..|.||||+|+..|+.+++++|++..
T Consensus 100 --------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 100 --------------------------------------------------NKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp --------------------------------------------------TCCCTTSCCSHHHHHHTTCHHHHHHHHHHC
T ss_pred --------------------------------------------------ccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 234456889999999999999999999985
Q ss_pred CCcccccccCCCcHHHHHHHcCc-----hhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCC
Q 041922 241 PVAIHDLDSEKKNLVLLAVENRQ-----TGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGP 306 (523)
Q Consensus 241 ~~~~~~~d~~G~t~Lh~A~~~~~-----~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~ 306 (523)
+++++.+|..|+||||+|+..++ .+++++|+++|+ +++.+|.+|+||||+|+..|+.++
T Consensus 130 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 130 REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA-------DQSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC-------CTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC-------CCCccCCCCCCHHHHHHHcCCHhH
Confidence 59999999999999999999887 899999999999 999999999999999999998654
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=1.6e-32 Score=265.68 Aligned_cols=197 Identities=16% Similarity=0.118 Sum_probs=134.6
Q ss_pred HHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCH
Q 041922 9 FAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNE 88 (523)
Q Consensus 9 Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~ 88 (523)
++...+.+.+.++|.+. +.+.+|.+|.||||+|+..|+.+++++|++.+. +++.+ +|+||||+|+..|+.
T Consensus 6 ~i~~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAGA-----LKNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp TGGGCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTG-----GGSCC--TTCCHHHHHTTSSSC
T ss_pred HHHhcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCC-----CCCCC--CCCCHHHHHHHcCCH
Confidence 45678899999999884 467889999999999999999999999999864 36666 499999999999999
Q ss_pred HHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCc
Q 041922 89 AMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLEN 168 (523)
Q Consensus 89 ~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~ 168 (523)
+++++|+++|++++ .+|..|+||||+|+.
T Consensus 76 ~~v~~Ll~~ga~~~----------------------------------~~d~~g~t~L~~A~~----------------- 104 (285)
T 3kea_A 76 KIVKILLFSGLDDS----------------------------------QFDDKGNTALYYAVD----------------- 104 (285)
T ss_dssp HHHHHHHHTTCCTT----------------------------------CCCTTSCCHHHHHHH-----------------
T ss_pred HHHHHHHHCCCCCC----------------------------------CcCCCCCcHHHHHHH-----------------
Confidence 99999999987764 445556666665541
Q ss_pred cccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCC-ChHHHHHHHcChHHHHHHHHhhCCCc
Q 041922 169 DQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRK-ATPILIAAKMGVTEMVEKILDTIPVA 243 (523)
Q Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g-~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 243 (523)
.+..+++++|+++ +.++..| .||||+|+..|+.+++++|+++ +.+
T Consensus 105 -----------------------------~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~ 154 (285)
T 3kea_A 105 -----------------------------SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPS 154 (285)
T ss_dssp -----------------------------TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCT
T ss_pred -----------------------------cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCc
Confidence 1113355555554 3444455 4666666666666666666654 333
Q ss_pred cccccc-CCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcH-hHHHHHhCCCC
Q 041922 244 IHDLDS-EKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSA-LHLAAKFGEYG 305 (523)
Q Consensus 244 ~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~Tp-LH~Aa~~~~~~ 305 (523)
. .|. .|+||||+|+.+|+.+++++|+++|+ ++|.+|..|+|| ||+|+..++.+
T Consensus 155 ~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------d~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 155 T--FDLAILLSCIHITIKNGHVDMMILLLDYMT-------STNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp T--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHH-------HTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred c--ccccCCccHHHHHHHcChHHHHHHHHHcCC-------CCCcccCCCCChHHHHHHHcCCHH
Confidence 2 222 55666666666666666666666665 555666666665 66666655543
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=6.4e-31 Score=253.65 Aligned_cols=216 Identities=19% Similarity=0.171 Sum_probs=160.0
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCC
Q 041922 30 EAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGL 109 (523)
Q Consensus 30 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 109 (523)
++.+|.+|+||||+||..|+.++|++|++.+.+ ...++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-------- 71 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAG--HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-------- 71 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTT--SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--------
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------
Confidence 356899999999999999999999999998753 2348899999999999999999999999999987655
Q ss_pred ceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccC
Q 041922 110 ANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKD 189 (523)
Q Consensus 110 ~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (523)
+.+|..|+||||+|+..
T Consensus 72 --------------------------~~~~~~g~tpL~~A~~~------------------------------------- 88 (282)
T 1oy3_D 72 --------------------------LVAERGGHTALHLACRV------------------------------------- 88 (282)
T ss_dssp --------------------------SCCCTTSCCHHHHHTTT-------------------------------------
T ss_pred --------------------------CCCCCCCCCHHHHHHHc-------------------------------------
Confidence 67788999999988731
Q ss_pred CCcchhhhhHHHHHHHHHHhcc-----------------cccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCC
Q 041922 190 GNARDETATAAVQELKFMKKKD-----------------QQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKK 252 (523)
Q Consensus 190 ~~~~~~~~~~~~~~v~~Ll~~~-----------------~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 252 (523)
+..++++.|+++. .....+.+|++.++..+....+..++...+.+++..|..|+
T Consensus 89 ---------~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 89 ---------RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp ---------TCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred ---------CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 1244777777651 12245778888888877776666666556889999999999
Q ss_pred cHHHHHHHcCchhHHHHHHhccccCCccccccccccCC-CCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCC
Q 041922 253 NLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIK-GNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMP 331 (523)
Q Consensus 253 t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~-G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~ 331 (523)
||||+|+.+|+.+++++|+++|+ +++.+|.. |+||||+|+..|+.+++ +.++.
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~-------~~~~~~~~~g~tpL~~A~~~~~~~~v-------------------~~Ll~ 213 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGA-------DLNKPEPTCGRTPLHLAVEAQAASVL-------------------ELLLK 213 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTC-------CTTCCCTTTCCCHHHHHHHTTCHHHH-------------------HHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC-------CCCCCCCCCCcCHHHHHHHcCCHHHH-------------------HHHHH
Confidence 99999999999999999999999 99999864 99999999999985543 22222
Q ss_pred ccc-ccccCCCCCChhHHhhhhh
Q 041922 332 RYF-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 332 ~~~-~~~~n~~G~Tpl~la~~~~ 353 (523)
.++ ++.+|.+|+||+++|.+..
T Consensus 214 ~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 214 AGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTSS
T ss_pred cCCCCcccccCCCCHHHHHHHcC
Confidence 333 5889999999999998654
No 39
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=7e-31 Score=246.85 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=180.8
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCc
Q 041922 31 AKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLA 110 (523)
Q Consensus 31 ~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 110 (523)
+..|..|.||||.|+..|+.+++++|++.+. +++.+|..|.||||+|++.|+.+++++|++.|++++.
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------- 70 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGY-----DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ------- 70 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCC-----CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh-------
Confidence 4568899999999999999999999999764 4889999999999999999999999999999876532
Q ss_pred eeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCC
Q 041922 111 NCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDG 190 (523)
Q Consensus 111 l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (523)
..+..|.||||.|+.
T Consensus 71 --------------------------~~~~~~~t~L~~A~~--------------------------------------- 85 (240)
T 3eu9_A 71 --------------------------LGGDLNSTPLHWATR--------------------------------------- 85 (240)
T ss_dssp --------------------------CBTTTTBCHHHHHHH---------------------------------------
T ss_pred --------------------------hcCCcCCChhHHHHH---------------------------------------
Confidence 334568999998762
Q ss_pred CcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCc-hh
Q 041922 191 NARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQ-TG 265 (523)
Q Consensus 191 ~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~-~~ 265 (523)
.+..++++.|++. +..+..|.||||+|+..|+.+++++|++. +++++..|..|.||||+|+..++ .+
T Consensus 86 -------~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 86 -------QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp -------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred -------cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChHH
Confidence 2235688889887 56678899999999999999999999997 89999999999999999997776 89
Q ss_pred HHHHHHhccccCCccccccccccC-CCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCC
Q 041922 266 IYKLLLDRKMLGESDLNIFEHVDI-KGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGK 343 (523)
Q Consensus 266 iv~~Ll~~~~~~~~~~~~in~~d~-~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~ 343 (523)
++++|++.|. +++.++. .|+||||+|+..++.+++ +.++..+. ++.+|.+|+
T Consensus 158 ~~~~L~~~~~-------~~~~~~~~~g~t~L~~A~~~~~~~~v-------------------~~Ll~~g~~~~~~~~~g~ 211 (240)
T 3eu9_A 158 PTRLLLTFNV-------SVNLGDKYHKNTALHWAVLAGNTTVI-------------------SLLLEAGANVDAQNIKGE 211 (240)
T ss_dssp THHHHHHTTC-------CTTCCCTTTCCCHHHHHHHHTCHHHH-------------------HHHHHHTCCTTCBCTTSC
T ss_pred HHHHHHhcCC-------CcchhhccCCCcHHHHHHHcCCHHHH-------------------HHHHHcCCCCCCcCCCCC
Confidence 9999999999 9999997 999999999999986543 11222222 588999999
Q ss_pred ChhHHhhhhh
Q 041922 344 TPKEIFTKTH 353 (523)
Q Consensus 344 Tpl~la~~~~ 353 (523)
||+++|.+..
T Consensus 212 t~l~~A~~~~ 221 (240)
T 3eu9_A 212 SALDLAKQRK 221 (240)
T ss_dssp BHHHHHHHTT
T ss_pred CHHHHHHHcC
Confidence 9999999864
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=4.8e-31 Score=251.22 Aligned_cols=200 Identities=19% Similarity=0.169 Sum_probs=163.0
Q ss_pred chHHHHHHHcCCHHHHHHHH----HcCCCccccc----cCCCCCcHHHHHHHc---CCHHHHHHHHHHhcccc--cccc-
Q 041922 3 VNCLSKFAMRGQWDNFVQAY----ENNPMSREAK----LTRSGDTALHIAAAA---GQTNIVSELVEIMGENA--SNVL- 68 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll----~~~~~~~~~~----~~~~g~T~Lh~Aa~~---g~~~~v~~Ll~~~~~~~--~~~~- 68 (523)
-.+||.|+..|+.+.++.++ .. +.+++. .|..|+||||+|+.. |+.+++++|++.+.+.. ...+
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 36899999999998654444 45 566776 799999999999999 99999999999986421 0011
Q ss_pred ---cccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCc
Q 041922 69 ---KIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSS 145 (523)
Q Consensus 69 ---~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tp 145 (523)
..+|..|.||||+|+..|+.+++++|+++|++++..+ ..+.++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~----------------------------------~~~~~~ 126 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA----------------------------------CGRFFQ 126 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------------------------------CSGGGS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc----------------------------------cccccc
Confidence 1345789999999999999999999999988774432 222111
Q ss_pred cccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHH
Q 041922 146 RDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAA 225 (523)
Q Consensus 146 Lh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa 225 (523)
... +..+..|.||||+|+
T Consensus 127 ~~~--------------------------------------------------------------~~~~~~g~tpL~~A~ 144 (256)
T 2etb_A 127 KHQ--------------------------------------------------------------GTCFYFGELPLSLAA 144 (256)
T ss_dssp CCS--------------------------------------------------------------SSCCCSCSSHHHHHH
T ss_pred ccc--------------------------------------------------------------cccccCCCCHHHHHH
Confidence 110 223446999999999
Q ss_pred HcChHHHHHHHHhh--CCCcccccccCCCcHHHHHHH--cCchh-------HHHHHHhccccCCcccccc-------ccc
Q 041922 226 KMGVTEMVEKILDT--IPVAIHDLDSEKKNLVLLAVE--NRQTG-------IYKLLLDRKMLGESDLNIF-------EHV 287 (523)
Q Consensus 226 ~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~--~~~~~-------iv~~Ll~~~~~~~~~~~~i-------n~~ 287 (523)
..|+.+++++|++. .|++++.+|.+|+||||+|+. +++.+ ++++|+++|+ ++ +.+
T Consensus 145 ~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga-------~~~~~~~~~~~~ 217 (256)
T 2etb_A 145 CTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA-------RLCPTVQLEEIS 217 (256)
T ss_dssp HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH-------HHSTTCCGGGCC
T ss_pred HcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC-------Cccccccccccc
Confidence 99999999999993 499999999999999999999 78888 9999999999 88 999
Q ss_pred cCCCCcHhHHHHHhCCCCCc
Q 041922 288 DIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 288 d~~G~TpLH~Aa~~~~~~~~ 307 (523)
|.+|+||||+|+..|+.+++
T Consensus 218 d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 218 NHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp CTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999997654
No 41
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=1.3e-30 Score=244.04 Aligned_cols=178 Identities=20% Similarity=0.134 Sum_probs=163.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+++..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 42 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 114 (231)
T 3aji_A 42 TALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA-----HVNAVNQNGCTPLHYAA 114 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCcHHHHHHHHHh--CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCC-----CCCCCCCCCCCHHHHHH
Confidence 579999999999999999998 67788899999999999999999999999999864 48899999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|++++
T Consensus 115 ~~~~~~~~~~Ll~~g~~~~------------------------------------------------------------- 133 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANPD------------------------------------------------------------- 133 (231)
T ss_dssp HTTCHHHHHHHHHTTCCTT-------------------------------------------------------------
T ss_pred HcCCHHHHHHHHHcCCCCC-------------------------------------------------------------
Confidence 9999999999999987652
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCc
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVA 243 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 243 (523)
..+..|.||||+|+..|+.+++++|++. +++
T Consensus 134 ------------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~ 164 (231)
T 3aji_A 134 ------------------------------------------------AKDHYDATAMHRAAAKGNLKMVHILLFY-KAS 164 (231)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCC
T ss_pred ------------------------------------------------CcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCC
Confidence 2344689999999999999999999996 899
Q ss_pred ccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCC
Q 041922 244 IHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYG 305 (523)
Q Consensus 244 ~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~ 305 (523)
++.+|..|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|+..++.+
T Consensus 165 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 165 TNIQDTEGNTPLHLACDEERVEEAKFLVTQGA-------SIYIENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------CSCCCCTTSCCHHHHSCHHHHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC-------CCCCCCCCCCCHHHHHHhhHHHH
Confidence 99999999999999999999999999999999 99999999999999998877643
No 42
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=6.2e-31 Score=233.27 Aligned_cols=147 Identities=25% Similarity=0.341 Sum_probs=136.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCC
Q 041922 39 TALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGN 118 (523)
Q Consensus 39 T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~ 118 (523)
++|+.||+.|+.++|+.|++.|. ++|.+|.+|+||||+|+..++.+++++|+++|+++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga-----dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~----------------- 63 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA-----DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV----------------- 63 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-----------------
Confidence 47999999999999999999864 59999999999999999999999999999998876
Q ss_pred cccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhh
Q 041922 119 LEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETAT 198 (523)
Q Consensus 119 ~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (523)
T Consensus 64 -------------------------------------------------------------------------------- 63 (169)
T 4gpm_A 64 -------------------------------------------------------------------------------- 63 (169)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCC
Q 041922 199 AAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGE 278 (523)
Q Consensus 199 ~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~ 278 (523)
+.+|.+|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+++|+.+++++|+++|+
T Consensus 64 ------------~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga--- 127 (169)
T 4gpm_A 64 ------------NAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA--- 127 (169)
T ss_dssp ------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---
T ss_pred ------------hhhccCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---
Confidence 23455689999999999999999999997 89999999999999999999999999999999999
Q ss_pred ccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 279 SDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 279 ~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+++.+|.+|+||||+|++.|+.+++
T Consensus 128 ----d~~~~d~~G~TpL~~A~~~g~~~iv 152 (169)
T 4gpm_A 128 ----DVNTSDSDGRTPLDLAREHGNEEVV 152 (169)
T ss_dssp ----CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ----CccccCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999999999999996654
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.1e-32 Score=257.26 Aligned_cols=214 Identities=14% Similarity=0.096 Sum_probs=180.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCC--ccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPM--SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHL 81 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~--~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 81 (523)
.+||.|+..|+.+.++.+++..+. .+++..|..|.||||+|+..|+.+++++|++.| .+++.+|..|.||||+
T Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~ 84 (236)
T 1ikn_D 10 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG-----CDPELRDFRGNTPLHL 84 (236)
T ss_dssp CTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC-----CCSCCCCTTCCCHHHH
T ss_pred chhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHH
Confidence 579999999999999999887432 367888999999999999999999999999875 3589999999999999
Q ss_pred HHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCC
Q 041922 82 AAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPE 161 (523)
Q Consensus 82 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~ 161 (523)
|+..|+.+++++|++.+++... ...++..|..|.||||.|+.
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~----------------------------~~~~~~~~~~g~t~L~~A~~---------- 126 (236)
T 1ikn_D 85 ACEQGCLASVGVLTQSCTTPHL----------------------------HSILKATNYNGHTCLHLASI---------- 126 (236)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSS----------------------------SCGGGCCCTTCCCHHHHHHH----------
T ss_pred HHHcCCHHHHHHHHhcccchhH----------------------------HHHhhccCCCCCCHHHHHHH----------
Confidence 9999999999999999875421 23457788999999998862
Q ss_pred CCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccC-CCChHHHHHHHcChHHHHHHH
Q 041922 162 TPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSG-RKATPILIAAKMGVTEMVEKI 236 (523)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~-~g~tpLh~Aa~~g~~~~v~~L 236 (523)
.+..+++++|+++ +.++. .|.||||+|+..|+.+++++|
T Consensus 127 ------------------------------------~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 170 (236)
T 1ikn_D 127 ------------------------------------HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170 (236)
T ss_dssp ------------------------------------TTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------------------------cCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 1225588999887 55665 899999999999999999999
Q ss_pred HhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhC
Q 041922 237 LDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFG 302 (523)
Q Consensus 237 l~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 302 (523)
++. |++++.+|..|+||||+|+.+|+.+++++|+++|+.. ....++.+|.||.+.+....
T Consensus 171 l~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-----~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 171 LKC-GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN-----LQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp HTT-TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG-----GSSCCCCCTTTCCCCC----
T ss_pred HHc-CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh-----hhcCCccchHHHHhhhcccc
Confidence 997 9999999999999999999999999999999999932 33488999999988776543
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=4.7e-31 Score=251.79 Aligned_cols=202 Identities=21% Similarity=0.259 Sum_probs=162.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHH----cCCCcccccc----CCCCCcHHHHHH---HcCCHHHHHHHHHHhcccc------
Q 041922 2 EVNCLSKFAMRGQWDNFVQAYE----NNPMSREAKL----TRSGDTALHIAA---AAGQTNIVSELVEIMGENA------ 64 (523)
Q Consensus 2 ~~~~L~~Aa~~g~~~~v~~ll~----~~~~~~~~~~----~~~g~T~Lh~Aa---~~g~~~~v~~Ll~~~~~~~------ 64 (523)
+-.+||.|+..|+.+.++.+++ . +.+++.. |..|.||||+|+ +.|+.+++++|++.+.+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 4578999999999998777776 5 3344433 377999999999 7799999999999876321
Q ss_pred cccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCC
Q 041922 65 SNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKS 144 (523)
Q Consensus 65 ~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~t 144 (523)
...++.+|..|+||||+|+..|+.+++++|+++|++++..+...- ....|.
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~-------------------------~~~~~~---- 133 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRF-------------------------FQPKDE---- 133 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECC-------------------------CSSSCC----
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccc-------------------------cCcccc----
Confidence 133566777999999999999999999999999987754322100 000000
Q ss_pred ccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHH
Q 041922 145 SRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIA 224 (523)
Q Consensus 145 pLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~A 224 (523)
...+..|.||||+|
T Consensus 134 ------------------------------------------------------------------~~~~~~g~tpL~~A 147 (260)
T 3jxi_A 134 ------------------------------------------------------------------GGYFYFGELPLSLA 147 (260)
T ss_dssp ------------------------------------------------------------------CCSCCSCSSHHHHH
T ss_pred ------------------------------------------------------------------cccccCCCCHHHHH
Confidence 12335699999999
Q ss_pred HHcChHHHHHHHHhh--CCCcccccccCCCcHHHHHHHcCc---------hhHHHHHHhccccCCcccccc-------cc
Q 041922 225 AKMGVTEMVEKILDT--IPVAIHDLDSEKKNLVLLAVENRQ---------TGIYKLLLDRKMLGESDLNIF-------EH 286 (523)
Q Consensus 225 a~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~~~~~~~~~~~i-------n~ 286 (523)
+..|+.+++++|++. .|++++.+|.+|+||||+|+..++ .+++++|+++|+ ++ +.
T Consensus 148 ~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga-------~~~~~~~~~~~ 220 (260)
T 3jxi_A 148 ACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA-------KLFPDTNLEAL 220 (260)
T ss_dssp HHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH-------HHCTTCCGGGC
T ss_pred HHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCc-------ccccccchhhc
Confidence 999999999999993 389999999999999999999887 699999999999 77 78
Q ss_pred ccCCCCcHhHHHHHhCCCCCc
Q 041922 287 VDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 287 ~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+|.+|+||||+|++.|+.+++
T Consensus 221 ~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 221 LNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp CCTTSCCHHHHHHHTTCHHHH
T ss_pred ccCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999997654
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.7e-30 Score=242.09 Aligned_cols=187 Identities=19% Similarity=0.146 Sum_probs=156.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEec
Q 041922 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWS 115 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~ 115 (523)
.|+||||+|+..|+.++++.|++.. +.+++.+|.+|+||||+|+..|+.+++++|++.|+++.....
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------- 68 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE----GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPM--------- 68 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT----CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCC---------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc----CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccc---------
Confidence 5899999999999999999999862 246999999999999999999999999999999987632110
Q ss_pred cCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchh
Q 041922 116 SGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDE 195 (523)
Q Consensus 116 ~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (523)
T Consensus 69 -------------------------------------------------------------------------------- 68 (232)
T 2rfa_A 69 -------------------------------------------------------------------------------- 68 (232)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCccccccc-------------CCCcHHHHHHHcC
Q 041922 196 TATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDS-------------EKKNLVLLAVENR 262 (523)
Q Consensus 196 ~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-------------~G~t~Lh~A~~~~ 262 (523)
+..|..|.||||+|+..|+.+++++|+++ +++++..+. +|+||||+|+.+|
T Consensus 69 ---------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 132 (232)
T 2rfa_A 69 ---------------TSELYEGQTALHIAVINQNVNLVRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVG 132 (232)
T ss_dssp ---------------CSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHT
T ss_pred ---------------cccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCcceeecccccccCCCCHHHHHHHcC
Confidence 23455799999999999999999999997 889888766 7999999999999
Q ss_pred chhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-------c
Q 041922 263 QTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-------F 335 (523)
Q Consensus 263 ~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-------~ 335 (523)
+.+++++|+++|+ ++|.+|.+|+||||+|+..++.+++. +.++.++..+. .
T Consensus 133 ~~~~v~~Ll~~ga-------~~~~~d~~g~t~L~~A~~~~~~~~~~---------------~i~~~Ll~~g~~~~~~~~~ 190 (232)
T 2rfa_A 133 SEEIVRLLIEHGA-------DIRAQDSLGNTVLHILILQPNKTFAC---------------QMYNLLLSYDGGDHLKSLE 190 (232)
T ss_dssp CHHHHHHHHHTTC-------CTTCCCTTSCCHHHHHHTCSCHHHHH---------------HHHHHHHHTTCSCSSCCGG
T ss_pred CHHHHHHHHHCCC-------CCCCCCCCCCCHHHHHHHcCChHHHH---------------HHHHHHHhcCCchhhhhhh
Confidence 9999999999999 99999999999999999999854320 00111221111 2
Q ss_pred cccCCCCCChhHHhhhhh
Q 041922 336 LGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 336 ~~~n~~G~Tpl~la~~~~ 353 (523)
+.+|++|+||+++|.+..
T Consensus 191 ~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp GCCCTTSCCHHHHHHHHT
T ss_pred ccCCCCCCCHHHHHHHcC
Confidence 689999999999999764
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.2e-31 Score=262.96 Aligned_cols=176 Identities=16% Similarity=0.207 Sum_probs=121.4
Q ss_pred ccccc-cccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCC
Q 041922 66 NVLKI-QNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKS 144 (523)
Q Consensus 66 ~~~~~-~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~t 144 (523)
.++|. +|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+|
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad----------------------------------~n~~d~~g~T 166 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN----------------------------------RLYGDNMGES 166 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------------------------------TTBCCTTCCC
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----------------------------------CCCcCCCCCC
Confidence 34666 677888888888888888888888877654 4778889999
Q ss_pred ccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhH----HHHHHHHHHhc-ccccCCCCh
Q 041922 145 SRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATA----AVQELKFMKKK-DQQSGRKAT 219 (523)
Q Consensus 145 pLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~v~~Ll~~-~~~~~~g~t 219 (523)
|||+|+. .++.. ..++++.+... +.+|..|+|
T Consensus 167 pLh~A~~-------------------------------------------~g~~~~~~~~~~ll~~~~~~~~~~d~~g~t 203 (327)
T 1sw6_A 167 CLVKAVK-------------------------------------------SVNNYDSGTFEALLDYLYPCLILEDSMNRT 203 (327)
T ss_dssp HHHHHHH-------------------------------------------SSHHHHTTCHHHHHHHHGGGGGEECTTCCC
T ss_pred HHHHHHH-------------------------------------------hcccccHHHHHHHHHhhhccccCCCCCCCC
Confidence 9998872 12211 12244444332 677889999
Q ss_pred HHHHHHH----cChHHHHHHHHhhC-------------------CCcccccccCCCcHHHHHHHcCchhHHHHHHhcccc
Q 041922 220 PILIAAK----MGVTEMVEKILDTI-------------------PVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKML 276 (523)
Q Consensus 220 pLh~Aa~----~g~~~~v~~Ll~~~-------------------~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~ 276 (523)
|||+|+. .|+.+++++|++.. +++++.+|..|+||||.|+. +++|+++
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--- 274 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--- 274 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH---
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh---
Confidence 9999998 89999999998763 78889999999999999985 8888876
Q ss_pred CCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhhh
Q 041922 277 GESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTKT 352 (523)
Q Consensus 277 ~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~~ 352 (523)
++|.+|.+|+||||+|+..|+.+++ +.++..++ ++.+|++|+||+|+|.+.
T Consensus 275 ------~~n~~d~~G~TpLh~A~~~g~~~~v-------------------~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 275 ------MLNAQDSNGDTCLNIAARLGNISIV-------------------DALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ------TTTCCCTTSCCHHHHHHHHCCHHHH-------------------HHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred ------CCCCCCCCCCCHHHHHHHcCCHHHH-------------------HHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 4678899999999999999985543 22333333 588999999999998753
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.7e-31 Score=263.83 Aligned_cols=193 Identities=16% Similarity=0.139 Sum_probs=148.7
Q ss_pred CCHHHHHHHHHcCCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCC---H
Q 041922 13 GQWDNFVQAYENNPMSREAK-LTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGN---E 88 (523)
Q Consensus 13 g~~~~v~~ll~~~~~~~~~~-~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~---~ 88 (523)
+..+.+.+++.+. +.+++. +|..|+||||+||..|+.++|++|++.|. +++.+|.+|+||||+|+..|+ .
T Consensus 107 ~~~~~~~~~l~~~-g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga-----d~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 107 SLLQEVNDAFPNT-QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS-----NRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp HHHHHHHHHCTTS-CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hhHHHHHHHHHhc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHHHhcccccH
Confidence 3334444444433 678888 89999999999999999999999999864 589999999999999999999 6
Q ss_pred HHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCc
Q 041922 89 AMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLEN 168 (523)
Q Consensus 89 ~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~ 168 (523)
++++.|++.+. .+++.+|..|+||||+|+..
T Consensus 181 ~~~~~ll~~~~---------------------------------~~~~~~d~~g~tpLh~A~~~---------------- 211 (327)
T 1sw6_A 181 GTFEALLDYLY---------------------------------PCLILEDSMNRTILHHIIIT---------------- 211 (327)
T ss_dssp TCHHHHHHHHG---------------------------------GGGGEECTTCCCHHHHHHHH----------------
T ss_pred HHHHHHHHhhh---------------------------------ccccCCCCCCCCHHHHHHHH----------------
Confidence 88888888752 23477899999999988620
Q ss_pred cccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc------------------------ccccCCCChHHHHH
Q 041922 169 DQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK------------------------DQQSGRKATPILIA 224 (523)
Q Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~------------------------~~~~~~g~tpLh~A 224 (523)
....++ .++++.|++. +.++..|.||||.|
T Consensus 212 ----~~~~g~----------------------~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a 265 (327)
T 1sw6_A 212 ----SGMTGC----------------------SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILEN 265 (327)
T ss_dssp ----HTSTTC----------------------HHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHH
T ss_pred ----cccccc----------------------HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHH
Confidence 000111 2244444322 45678899999999
Q ss_pred HHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhC
Q 041922 225 AKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFG 302 (523)
Q Consensus 225 a~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 302 (523)
+. +++|++. +++.+|.+|+||||+|+++|+.+++++|+++|+ +++.+|.+|+||||+|++.|
T Consensus 266 ~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga-------d~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 266 LD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGA-------DPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC-------CTTCCCTTSCCGGGGTCC--
T ss_pred HH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCcccCCCCCCHHHHHHhcC
Confidence 96 8999987 589999999999999999999999999999999 99999999999999998764
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.3e-30 Score=249.01 Aligned_cols=203 Identities=20% Similarity=0.217 Sum_probs=163.4
Q ss_pred chHHHHHHHcCCHHHHHHHHHcC--CCcccc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHHhcccc--cccccc-
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENN--PMSREA----KLTRSGDTALHIAAAA---GQTNIVSELVEIMGENA--SNVLKI- 70 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~--~~~~~~----~~~~~g~T~Lh~Aa~~---g~~~~v~~Ll~~~~~~~--~~~~~~- 70 (523)
..+||.|+..|+.+.++.+++.. .+.+++ ..|..|+||||+|+.. |+.+++++|++.+.+.. ..+++.
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~ 93 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNAS 93 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCC
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcc
Confidence 36899999999999999998731 133333 4588999999999987 99999999999986311 011333
Q ss_pred ---cccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccc
Q 041922 71 ---QNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRD 147 (523)
Q Consensus 71 ---~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh 147 (523)
+|..|.||||+|+..|+.+++++|+++|++++..++.+ ..
T Consensus 94 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~----------------------------------~~--- 136 (273)
T 2pnn_A 94 YTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD----------------------------------FF--- 136 (273)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSG----------------------------------GG---
T ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccc----------------------------------cc---
Confidence 67899999999999999999999999998875433211 00
Q ss_pred cCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHc
Q 041922 148 SRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKM 227 (523)
Q Consensus 148 ~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~ 227 (523)
... .....+..|.||||+|+..
T Consensus 137 -~~~---------------------------------------------------------~~~~~~~~g~tpL~~A~~~ 158 (273)
T 2pnn_A 137 -KKT---------------------------------------------------------KGRPGFYFGELPLSLAACT 158 (273)
T ss_dssp -SSC---------------------------------------------------------SSSCCCCSCBSHHHHHHHT
T ss_pred -ccc---------------------------------------------------------cccccccCCCCHHHHHHHc
Confidence 000 0023455799999999999
Q ss_pred ChHHHHHHHHhh--CCCcccccccCCCcHHHHHHHcCc---------hhHHHHHHhccccCCccccccc-------cccC
Q 041922 228 GVTEMVEKILDT--IPVAIHDLDSEKKNLVLLAVENRQ---------TGIYKLLLDRKMLGESDLNIFE-------HVDI 289 (523)
Q Consensus 228 g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~~~~~~~~~~~in-------~~d~ 289 (523)
|+.+++++|++. .|++++.+|.+|+||||+|+..|+ .+++++|+++|+ ++| .+|.
T Consensus 159 g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga-------~~n~~~~~~~~~d~ 231 (273)
T 2pnn_A 159 NQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA-------KLHPTLKLEEITNR 231 (273)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH-------HHCTTCCGGGCCCT
T ss_pred CCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh-------hcccccccccccCC
Confidence 999999999993 489999999999999999999988 799999999999 775 5999
Q ss_pred CCCcHhHHHHHhCCCCCc
Q 041922 290 KGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 290 ~G~TpLH~Aa~~~~~~~~ 307 (523)
+|+||||+|+..|+.+++
T Consensus 232 ~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 232 KGLTPLALAASSGKIGVL 249 (273)
T ss_dssp TSCCHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHhChHHHH
Confidence 999999999999996653
No 49
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=9.4e-30 Score=236.80 Aligned_cols=186 Identities=24% Similarity=0.252 Sum_probs=167.9
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+.+..|..|.||||+|+..|+.+++++|++.+. .+++.+|..|.||||+|+
T Consensus 27 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 27 TALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA----TDLDARMHDGTTPLILAA 100 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTT----SCTTCCCTTCCCHHHHHH
T ss_pred chHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCCcHHHHHH
Confidence 579999999999999999998 67778899999999999999999999999999753 358889999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|+++ +.+|..|+||||.|+.
T Consensus 101 ~~~~~~~~~~Ll~~g~~~----------------------------------~~~~~~g~t~L~~A~~------------ 134 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADV----------------------------------NAVDDLGKSALHWAAA------------ 134 (223)
T ss_dssp HHTCHHHHHHHHHTTCCT----------------------------------TCBCTTSCBHHHHHHH------------
T ss_pred HhCcHHHHHHHHHcCCCC----------------------------------cCcCCCCCcHHHHHHH------------
Confidence 999999999999987654 6778899999998762
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhh
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDT 239 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 239 (523)
.+..+++++|+++ +.++..|.||||+|+..|+.+++++|+++
T Consensus 135 ----------------------------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 135 ----------------------------------VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180 (223)
T ss_dssp ----------------------------------TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred ----------------------------------cCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 1225688889887 57788999999999999999999999997
Q ss_pred CCCcccccccCCCcHHHHHHHcCchhHHHHHHhcccc
Q 041922 240 IPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKML 276 (523)
Q Consensus 240 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~ 276 (523)
+++++.+|..|+||||+|+++++.+++++|+++|+.
T Consensus 181 -ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 181 -FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp -TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred -CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 899999999999999999999999999999999983
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=1.8e-29 Score=230.85 Aligned_cols=186 Identities=20% Similarity=0.178 Sum_probs=158.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeE
Q 041922 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCS 113 (523)
Q Consensus 34 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l 113 (523)
+..+.||||.|+..|+.+.++.|++.+. .+++.+|.+|.||||+|++.|+.+++++|+++|++++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------- 66 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTT----YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN----------- 66 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTT----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----------
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCC----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----------
Confidence 4578999999999999999999998643 3689999999999999999999999999999988662
Q ss_pred eccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcc
Q 041922 114 WSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNAR 193 (523)
Q Consensus 114 ~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (523)
T Consensus 67 -------------------------------------------------------------------------------- 66 (201)
T 3hra_A 67 -------------------------------------------------------------------------------- 66 (201)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhc
Q 041922 194 DETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDR 273 (523)
Q Consensus 194 ~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~ 273 (523)
.++..|.||||+|+..|+.+++++|++..+.+++..|..|+||||+|+.+|+.+++++|+++
T Consensus 67 ------------------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 128 (201)
T 3hra_A 67 ------------------LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLED 128 (201)
T ss_dssp ------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHH
T ss_pred ------------------CCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 23446899999999999999999999887899999999999999999999999999999999
Q ss_pred c-ccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHhhh
Q 041922 274 K-MLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIFTK 351 (523)
Q Consensus 274 ~-~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la~~ 351 (523)
| . +++.+|..|+||||+|+..++... ...+.++.++..++ ++.+|.+|+||+++|.+
T Consensus 129 g~~-------~~~~~~~~g~t~L~~A~~~~~~~~--------------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 129 GRE-------DIDFQNDFGYTALIEAVGLREGNQ--------------LYQDIVKLLMENGADQSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp CCC-------CTTCCCTTSCCHHHHHHHSSCCSH--------------HHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCC-------CcCCCCCCCCCHHHHHHHhccchh--------------hHHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 9 6 999999999999999999887321 01122333333333 58899999999999987
Q ss_pred hh
Q 041922 352 TH 353 (523)
Q Consensus 352 ~~ 353 (523)
..
T Consensus 188 ~~ 189 (201)
T 3hra_A 188 KG 189 (201)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.8e-29 Score=225.00 Aligned_cols=169 Identities=18% Similarity=0.183 Sum_probs=147.5
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
..+||.|+..|+.+.++.+++..+ ...+..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGD-NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA-----DPHILAKERESALSLA 76 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCS-GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-----CTTCCCTTCCCHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCc-ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CchhhcccCCCHHHHH
Confidence 468999999999999999999853 3367889999999999999999999999999864 4889999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|+++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~------------------------------------------------------------- 95 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDI------------------------------------------------------------- 95 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCT-------------------------------------------------------------
T ss_pred HHCCCHHHHHHHHHcCCCC-------------------------------------------------------------
Confidence 9999999999999998765
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|..|.||||+|+..|+.+++++|++. |+
T Consensus 96 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga 126 (172)
T 3v30_A 96 ------------------------------------------------NIYDWNGGTPLLYAVRGNHVKCVEALLAR-GA 126 (172)
T ss_dssp ------------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ------------------------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 22445689999999999999999999997 89
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcH
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSA 294 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~Tp 294 (523)
+++.+|.+|+||||+|+.+|+.+++++|+++++ ++..++..|.||
T Consensus 127 ~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~-------~~~~~~~~~~~p 171 (172)
T 3v30_A 127 DLTTEADSGYTPMDLAVALGYRKVQQVIENHIL-------KLFQSNLVPADP 171 (172)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH-------HHSCC-------
T ss_pred CccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH-------HHhcccCCCCCC
Confidence 999999999999999999999999999999999 888999999987
No 52
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=9.2e-30 Score=231.29 Aligned_cols=157 Identities=22% Similarity=0.238 Sum_probs=143.6
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCC
Q 041922 29 REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEG 108 (523)
Q Consensus 29 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 108 (523)
..+.+|..|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------- 94 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFD-----KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV------- 94 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-------
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc-----ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-------
Confidence 456789999999999999999999999999874 48899999999999999999999999999998765
Q ss_pred CceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhcc
Q 041922 109 LANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNK 188 (523)
Q Consensus 109 ~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (523)
T Consensus 95 -------------------------------------------------------------------------------- 94 (192)
T 2rfm_A 95 -------------------------------------------------------------------------------- 94 (192)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHH
Q 041922 189 DGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYK 268 (523)
Q Consensus 189 ~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~ 268 (523)
+.+|..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+.+|+.++++
T Consensus 95 ----------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (192)
T 2rfm_A 95 ----------------------NTKDFSGKTPLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVK 151 (192)
T ss_dssp ----------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred ----------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 22345689999999999999999999997 8999999999999999999999999999
Q ss_pred HHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 269 LLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 269 ~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+|+++|+ +++.+|.+|+||||+|+..|+.+++
T Consensus 152 ~Ll~~ga-------~~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 152 KLLELGA-------DISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp HHHHTTC-------CTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHHCCC-------CCCCcCCCCCCHHHHHHHhCcHHHH
Confidence 9999999 9999999999999999999986543
No 53
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=249.76 Aligned_cols=188 Identities=16% Similarity=0.183 Sum_probs=161.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCc-ccccccCCCCcee
Q 041922 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDR-ELISAADEGLANC 112 (523)
Q Consensus 34 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~-~~~~~~~~~~~l~ 112 (523)
+..+.+++|.|+..|+.+.++.+++.+.+ ..+|.+|.+|+||||+|+..|+.+++++|++.|+ ++
T Consensus 73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~---~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~----------- 138 (276)
T 4hbd_A 73 RLACRSDAHPELVRRHLVTFRAMSARLLD---YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV----------- 138 (276)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHHCHHHHH---HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-----------
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHh---hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-----------
Confidence 33467889999999999999999887653 4588999999999999999999999999999998 55
Q ss_pred EeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCc
Q 041922 113 SWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNA 192 (523)
Q Consensus 113 l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (523)
+..|..|.||||.|+..
T Consensus 139 -----------------------~~~~~~g~tpL~~a~~~---------------------------------------- 155 (276)
T 4hbd_A 139 -----------------------DKQNRAGYSPIMLTALA---------------------------------------- 155 (276)
T ss_dssp -----------------------TCCCTTSCCHHHHGGGC----------------------------------------
T ss_pred -----------------------CCCCCCCCCHHHHHHHH----------------------------------------
Confidence 56788899999977621
Q ss_pred chhhhhHHHHHHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHH
Q 041922 193 RDETATAAVQELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYK 268 (523)
Q Consensus 193 ~~~~~~~~~~~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~ 268 (523)
........++++.|++. +..+..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+.+|+.++++
T Consensus 156 -~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 156 -TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp -CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred -HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 01123456688888877 45567899999999999999999999997 9999999999999999999999999999
Q ss_pred HHHh-ccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 269 LLLD-RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 269 ~Ll~-~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+|++ .|+ +++.+|.+|+||||+|+..|+.+++
T Consensus 234 ~Ll~~~ga-------d~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 234 LLLAVPSC-------DISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp HHHTSTTC-------CTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHhcCCC-------CCcCcCCCCCCHHHHHHHcCCHHHH
Confidence 9999 888 9999999999999999999996653
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.3e-29 Score=243.76 Aligned_cols=206 Identities=17% Similarity=0.117 Sum_probs=156.7
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhccccccccc----ccccCCChHHhHHHHc---CCHHHHHHHHhcCccc
Q 041922 29 REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLK----IQNDRGDTALHLAAAL---GNEAMCHCMASKDREL 101 (523)
Q Consensus 29 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~----~~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~~~~ 101 (523)
..+..|..|+||||.|+..|+.++|+.|++.+.+.. ..++ .+|..|+||||+|+.. |+.+++++|++.|++.
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSK-KRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSC-CCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcc-cccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 345678999999999999999999999999765322 2233 4688999999999987 9999999999998764
Q ss_pred ccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHH
Q 041922 102 ISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLES 181 (523)
Q Consensus 102 ~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 181 (523)
..
T Consensus 84 ~~------------------------------------------------------------------------------ 85 (273)
T 2pnn_A 84 DS------------------------------------------------------------------------------ 85 (273)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 21
Q ss_pred HHHhhccCCCcchhhhhHHHHHHHHHHhc--ccccCCCChHHHHHHHcChHHHHHHHHhhCCCccccccc----------
Q 041922 182 AVAVHNKDGNARDETATAAVQELKFMKKK--DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDS---------- 249 (523)
Q Consensus 182 ~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~--~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~---------- 249 (523)
++.+++. ...|..|.||||+|+..|+.+++++|++. |++++.+|.
T Consensus 86 ----------------------~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~ 142 (273)
T 2pnn_A 86 ----------------------LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGR 142 (273)
T ss_dssp ----------------------HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSS
T ss_pred ----------------------hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCcccccccccccccc
Confidence 0111111 22455799999999999999999999997 899999997
Q ss_pred ----CCCcHHHHHHHcCchhHHHHHHh---ccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHH
Q 041922 250 ----EKKNLVLLAVENRQTGIYKLLLD---RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKW 322 (523)
Q Consensus 250 ----~G~t~Lh~A~~~~~~~iv~~Ll~---~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~ 322 (523)
.|+||||+|+.+|+.+++++|++ +|+ ++|.+|.+|+||||+|+..++...- .... .
T Consensus 143 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga-------d~~~~d~~g~tpLh~A~~~~~~~~~-----~~~~-----~ 205 (273)
T 2pnn_A 143 PGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA-------DISARDSVGNTVLHALVEVADNTVD-----NTKF-----V 205 (273)
T ss_dssp CCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC-------CTTCCCTTSCCHHHHHHHHCCSCHH-----HHHH-----H
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC-------CceeeCCCCCcHHHHHHHccCcchh-----HHHH-----H
Confidence 89999999999999999999999 888 9999999999999999998873210 0000 0
Q ss_pred HHHHHhhCCccc--------ccccCCCCCChhHHhhhhh
Q 041922 323 YKFVKESMPRYF--------FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 323 ~~~v~~~~~~~~--------~~~~n~~G~Tpl~la~~~~ 353 (523)
.+.++.++..+. .+.+|.+|+||+++|.+..
T Consensus 206 ~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 206 TSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp HHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 111222222222 2468999999999998764
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=3.6e-29 Score=238.21 Aligned_cols=197 Identities=16% Similarity=0.130 Sum_probs=151.5
Q ss_pred CCCcHHHHHHHcCCHHHH----HHHHHHhcccccccccc----cccCCChHHhHHHHc---CCHHHHHHHHhcCcccccc
Q 041922 36 SGDTALHIAAAAGQTNIV----SELVEIMGENASNVLKI----QNDRGDTALHLAAAL---GNEAMCHCMASKDRELISA 104 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v----~~Ll~~~~~~~~~~~~~----~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~ 104 (523)
.|+||||.|+..|+.+.+ ++|++.+ .+++. +|.+|+||||+|+.. |+.+++++|++.|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g-----~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 75 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNS-----KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNP 75 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHT-----CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcC-----CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccch
Confidence 388999999999999855 5555554 35777 899999999999999 9999999999998876321
Q ss_pred cCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHH
Q 041922 105 ADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVA 184 (523)
Q Consensus 105 ~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (523)
+. + ++. ..
T Consensus 76 ~~------------------~---------~~~-----------~~---------------------------------- 83 (256)
T 2etb_A 76 KP------------------L---------VNA-----------QC---------------------------------- 83 (256)
T ss_dssp SC------------------G---------GGC-----------CC----------------------------------
T ss_pred hh------------------h---------ccc-----------cc----------------------------------
Confidence 10 0 000 00
Q ss_pred hhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccC-------------C
Q 041922 185 VHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSE-------------K 251 (523)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G 251 (523)
..+|..|.||||+|+..|+.+++++|++. |++++..|.. |
T Consensus 84 --------------------------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 84 --------------------------TDEFYQGHSALHIAIEKRSLQCVKLLVEN-GADVHLRACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp --------------------------CSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCSC
T ss_pred --------------------------ccccccCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccccccccccccccccCC
Confidence 12345799999999999999999999997 8999999986 9
Q ss_pred CcHHHHHHHcCchhHHHHHHh---ccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHh
Q 041922 252 KNLVLLAVENRQTGIYKLLLD---RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKE 328 (523)
Q Consensus 252 ~t~Lh~A~~~~~~~iv~~Ll~---~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~ 328 (523)
+||||+|+.+|+.+++++|++ +|+ ++|.+|.+|+||||+|+..++... ..... ..+.++.
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga-------~~n~~d~~g~TpLh~A~~~~~~~~-----~~~~~-----~~~iv~~ 199 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPA-------SLEATDSLGNTVLHALVMIADNSP-----ENSAL-----VIHMYDG 199 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCC-------CTTCCCTTSCCHHHHHHHHCCSCH-----HHHHH-----HHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCC-------CcCccCCCCCCHHHHHHHcccCCc-----hhhHH-----HHHHHHH
Confidence 999999999999999999999 898 999999999999999999543211 00000 0011222
Q ss_pred hCCccc-c-------cccCCCCCChhHHhhhhh
Q 041922 329 SMPRYF-F-------LGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 329 ~~~~~~-~-------~~~n~~G~Tpl~la~~~~ 353 (523)
++..++ + +.+|.+|+||+++|.+..
T Consensus 200 Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 200 LLQMGARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp HHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCCcccccccccccCCCCCCHHHHHHHhC
Confidence 222222 3 789999999999999864
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=8.2e-29 Score=220.75 Aligned_cols=150 Identities=21% Similarity=0.237 Sum_probs=136.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEecc
Q 041922 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSS 116 (523)
Q Consensus 37 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~ 116 (523)
+.||||.|+..|+.++++.|++.+. ..++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------------- 63 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD----NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-------------- 63 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS----GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT--------------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc----ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch--------------
Confidence 5799999999999999999998753 4589999999999999999999999999999987662
Q ss_pred CCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhh
Q 041922 117 GNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDET 196 (523)
Q Consensus 117 ~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (523)
T Consensus 64 -------------------------------------------------------------------------------- 63 (172)
T 3v30_A 64 -------------------------------------------------------------------------------- 63 (172)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcccc
Q 041922 197 ATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKML 276 (523)
Q Consensus 197 ~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~ 276 (523)
..+..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+.+|+.+++++|+++|+
T Consensus 64 ---------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga- 126 (172)
T 3v30_A 64 ---------------ILAKERESALSLASTGGYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA- 126 (172)
T ss_dssp ---------------CCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred ---------------hhcccCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-
Confidence 2344689999999999999999999997 89999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 277 GESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 277 ~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+++.+|.+|+||||+|+..++.+++
T Consensus 127 ------~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 127 ------DLTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp ------CTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred ------CccccCCCCCCHHHHHHHhCcHHHH
Confidence 9999999999999999999986543
No 57
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=239.24 Aligned_cols=194 Identities=15% Similarity=0.047 Sum_probs=156.6
Q ss_pred HHHHHcCCCc-cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhc
Q 041922 19 VQAYENNPMS-REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASK 97 (523)
Q Consensus 19 ~~ll~~~~~~-~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 97 (523)
+.++++.... ..+..+.+|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN-----DPSQPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4566653221 133456677899999999999999999999864 5899999999999999999999999999999
Q ss_pred CcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhH
Q 041922 98 DRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNI 177 (523)
Q Consensus 98 ~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 177 (523)
|+++
T Consensus 77 ga~~---------------------------------------------------------------------------- 80 (229)
T 2vge_A 77 GANV---------------------------------------------------------------------------- 80 (229)
T ss_dssp TCCT----------------------------------------------------------------------------
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 8776
Q ss_pred HHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccc-cCCCcHHH
Q 041922 178 CLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLD-SEKKNLVL 256 (523)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh 256 (523)
+.+|..|.||||+|+..|+.+++++|++. |++++..| .+|+||||
T Consensus 81 ---------------------------------n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~ 126 (229)
T 2vge_A 81 ---------------------------------NSPDSHGWTPLHCAASCNDTVICMALVQH-GAAIFATTLSDGATAFE 126 (229)
T ss_dssp ---------------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCSSTTCCTGG
T ss_pred ---------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCCHHH
Confidence 23445689999999999999999999997 89999987 69999999
Q ss_pred HH--HHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc
Q 041922 257 LA--VENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF 334 (523)
Q Consensus 257 ~A--~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~ 334 (523)
+| +..|+.+++++|+++|+ +++.+|..|.||+|.++.....+.+...|+.+.
T Consensus 127 ~A~a~~~~~~~~v~~Ll~~ga-------~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~------------------- 180 (229)
T 2vge_A 127 KCDPYREGYADCATYLADVEQ-------SMGLMNSGAVYALWDYSAEFGDELSFREGESVT------------------- 180 (229)
T ss_dssp GCCTTSTTHHHHHHHHHHHHH-------HTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEE-------------------
T ss_pred HHHHHhcChHHHHHHHHHcCC-------CcccccCCchHHHHHHhhccccccCcccccccc-------------------
Confidence 99 99999999999999999 999999999999997766655444433333321
Q ss_pred ccccCCCCCChhHHhhhhh
Q 041922 335 FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 335 ~~~~n~~G~Tpl~la~~~~ 353 (523)
++.+|.+|+||+++|....
T Consensus 181 ~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 181 VLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp EEESSCTTCSSEEEEEETT
T ss_pred ccccCCCcccHHHHHHHcC
Confidence 3788999999999998764
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.3e-28 Score=218.25 Aligned_cols=150 Identities=22% Similarity=0.265 Sum_probs=127.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEec
Q 041922 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWS 115 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~ 115 (523)
.|.||||.|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.|++++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------- 63 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE-----NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ------------- 63 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS-----SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC-----CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-------------
Confidence 5789999999999999999999875 3488889999999999999999999999998877652
Q ss_pred cCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchh
Q 041922 116 SGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDE 195 (523)
Q Consensus 116 ~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (523)
T Consensus 64 -------------------------------------------------------------------------------- 63 (167)
T 3v31_A 64 -------------------------------------------------------------------------------- 63 (167)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 196 TATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 196 ~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
..+..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+.+|+.+++++|+++|+
T Consensus 64 ----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 126 (167)
T 3v31_A 64 ----------------LLGKGRESALSLACSKGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126 (167)
T ss_dssp ----------------CCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ----------------CcCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 2334578889999999999999999987 78888889999999999999999999999999888
Q ss_pred cCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 276 LGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 276 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+++.+|.+|+||||+|+..|+.+++
T Consensus 127 -------~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 127 -------DPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp -------CTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred -------CCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 8888899999999999988886543
No 59
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.3e-27 Score=212.34 Aligned_cols=82 Identities=24% Similarity=0.275 Sum_probs=42.9
Q ss_pred CCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHh
Q 041922 216 RKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSAL 295 (523)
Q Consensus 216 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpL 295 (523)
.|.||||+|+..|+.+++++|++. +++++..|.+|+||||+|+.+|+.+++++|+++|+ +++.+|..|+|||
T Consensus 79 ~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------~~~~~~~~g~t~l 150 (169)
T 2y1l_E 79 AGMTPLRLAALFGHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA-------DVNAQDKFGKTAF 150 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCCCcCCCCCCHH
Confidence 345555555555555555555554 45555555555555555555555555555555555 5555555555555
Q ss_pred HHHHHhCCCC
Q 041922 296 HLAAKFGEYG 305 (523)
Q Consensus 296 H~Aa~~~~~~ 305 (523)
|+|+..++.+
T Consensus 151 ~~A~~~~~~~ 160 (169)
T 2y1l_E 151 DISIDNGNED 160 (169)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHhCCHH
Confidence 5555555433
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.2e-28 Score=213.16 Aligned_cols=156 Identities=18% Similarity=0.193 Sum_probs=136.1
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
+++|+.|+..|+.+.++.+++. +.+++..|..|+||||+|+. |+.+++++|++.+. +++.+|..|.||||+|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQN--NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGA-----NPDLKDRTGFAVIHDA 77 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhC--CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCC-----CCCCCCCCCCCHHHHH
Confidence 5789999999999999999987 56778889999999999999 99999999998763 4888999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
++.|+.+++++|+++|+++
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~------------------------------------------------------------- 96 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADV------------------------------------------------------------- 96 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCT-------------------------------------------------------------
T ss_pred HHcCCHHHHHHHHHcCCCC-------------------------------------------------------------
Confidence 9999999999999988765
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|..|.||||+|+..|+.+++++|++....
T Consensus 97 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 97 ------------------------------------------------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp ------------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred ------------------------------------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 22445689999999999999999999998444
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
.++..|.+|+||||+|+.+|+.+++++|+++|+
T Consensus 129 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 129 NVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 479999999999999999999999999999987
No 61
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=6.3e-29 Score=240.46 Aligned_cols=200 Identities=18% Similarity=0.089 Sum_probs=174.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+++.. +|+||||+|+..|+.+++++|++.|. +++.+|..|.||||+|+
T Consensus 33 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga-----~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLLNA--GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGL-----DDSQFDDKGNTALYYAV 103 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTC-----CTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhC--CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCcHHHHHH
Confidence 589999999999999999998 6666665 59999999999999999999999864 58999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCC-CCccccCCCCCCCCccCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHG-KSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g-~tpLh~a~~~~~~~~~~l~~ 162 (523)
..|+.+++++|+++|+++ +.+|..| .||||.|+.
T Consensus 104 ~~g~~~~v~~Ll~~ga~~----------------------------------~~~~~~g~~t~L~~A~~----------- 138 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRL----------------------------------MFYGKTGWKTSFYHAVM----------- 138 (285)
T ss_dssp HTTCHHHHHHHHHHCGGG----------------------------------GGCSSSGGGSHHHHHHH-----------
T ss_pred HcCCHHHHHHHHhcCCCC----------------------------------CccCCCCCCCHHHHHHH-----------
Confidence 999999999999998765 5677888 799998762
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc--ccccC-CCChHHHHHHHcChHHHHHHHHhh
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK--DQQSG-RKATPILIAAKMGVTEMVEKILDT 239 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~--~~~~~-~g~tpLh~Aa~~g~~~~v~~Ll~~ 239 (523)
.+..+++++|+++ +..+. .|.||||+|+..|+.+++++|+++
T Consensus 139 -----------------------------------~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 139 -----------------------------------LNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY 183 (285)
T ss_dssp -----------------------------------TTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----------------------------------cCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc
Confidence 1235689999988 33333 799999999999999999999998
Q ss_pred CCCcccccccCCCcH-HHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 240 IPVAIHDLDSEKKNL-VLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 240 ~~~~~~~~d~~G~t~-Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
|++++.+|..|+|| ||+|+.+|+.+++++|+++|+ +++.+|. .|+..++.+++
T Consensus 184 -gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ga-------d~~~~~~-------~a~~~~~~~iv 237 (285)
T 3kea_A 184 -MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDI-------NIYSANL-------ENVLLDDAEIA 237 (285)
T ss_dssp -HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCB-------CSTTTTG-------GGGTTTCHHHH
T ss_pred -CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCC-------CCCCCCh-------hhhhcCCHHHH
Confidence 89999999999998 999999999999999999999 8888884 45566666554
No 62
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=3.4e-28 Score=212.43 Aligned_cols=147 Identities=22% Similarity=0.217 Sum_probs=118.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEecc
Q 041922 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSS 116 (523)
Q Consensus 37 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~ 116 (523)
..||||.|+..|+.+++++|++.+.+ ++ .|..|.||||+|+..|+.+++++|++.|+++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------------- 60 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP-----FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR--------------- 60 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-----CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT---------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC-----CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------
Confidence 45788888888888888888887642 33 5778888888888888888888888877655
Q ss_pred CCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhh
Q 041922 117 GNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDET 196 (523)
Q Consensus 117 ~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (523)
T Consensus 61 -------------------------------------------------------------------------------- 60 (153)
T 1awc_B 61 -------------------------------------------------------------------------------- 60 (153)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcccc
Q 041922 197 ATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKML 276 (523)
Q Consensus 197 ~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~ 276 (523)
+.++..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|+++|+
T Consensus 61 --------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga- 124 (153)
T 1awc_B 61 --------------DARTKVDRTPLHMAASEGHANIVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA- 124 (153)
T ss_dssp --------------TCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred --------------CCCCCCCCCHHHHHHHcChHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-
Confidence 22344578888888888888888888886 78888888888888888888888888888888888
Q ss_pred CCccccccccccCCCCcHhHHHHHhCCCCC
Q 041922 277 GESDLNIFEHVDIKGNSALHLAAKFGEYGP 306 (523)
Q Consensus 277 ~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~ 306 (523)
+++.+|.+|+||||+|+..|+.++
T Consensus 125 ------~~~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 125 ------DVHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp ------CTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ------CccccCCCCCCHHHHHHHcCCHHH
Confidence 888888888888888888887543
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=4.5e-28 Score=215.36 Aligned_cols=155 Identities=23% Similarity=0.264 Sum_probs=136.2
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
..+++.|+..|+.+.++.+++. +.+++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-----DVNAVDHAGMTPLRLA 87 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHH
T ss_pred cchHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCccCCCCCCHHHHH
Confidence 3578889999999999988888 66778888899999999999999999999998753 4788888999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|+++
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~------------------------------------------------------------- 106 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADV------------------------------------------------------------- 106 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCT-------------------------------------------------------------
T ss_pred HHcCCHHHHHHHHHcCCCC-------------------------------------------------------------
Confidence 9999999999999888765
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|..|.||||+|+..|+.+++++|+++ |+
T Consensus 107 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~ 137 (169)
T 2y1l_E 107 ------------------------------------------------NANDMEGHTPLHLAAMFGHLEIVEVLLKN-GA 137 (169)
T ss_dssp ------------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ------------------------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 23455799999999999999999999997 89
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHHHhcc
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLLLDRK 274 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 274 (523)
+++.+|.+|+||||+|+.+|+.+++++|++.|
T Consensus 138 ~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 138 DVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999876
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1e-27 Score=215.21 Aligned_cols=165 Identities=15% Similarity=0.135 Sum_probs=145.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
++|+.|+..|+.+.++.+++.. +.+++..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA-----RINVMNRGDDTPLHLAA 80 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHH
Confidence 5789999999999999999875 35677889999999999999999999999998763 48889999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|+++
T Consensus 81 ~~~~~~~v~~Ll~~g~~~-------------------------------------------------------------- 98 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADI-------------------------------------------------------------- 98 (179)
T ss_dssp HTTCHHHHHHHHHTTCCT--------------------------------------------------------------
T ss_pred HcCCHHHHHHHHHcCCCC--------------------------------------------------------------
Confidence 999999999999988765
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCc
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVA 243 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 243 (523)
+.+|..|.||||+|+..|+.+++++|+++ |++
T Consensus 99 -----------------------------------------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~ 130 (179)
T 3f6q_A 99 -----------------------------------------------NAVNEHGNVPLHYACFWGQDQVAEDLVAN-GAL 130 (179)
T ss_dssp -----------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred -----------------------------------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCC
Confidence 23445689999999999999999999997 899
Q ss_pred ccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCC
Q 041922 244 IHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKG 291 (523)
Q Consensus 244 ~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G 291 (523)
++.+|.+|+||||+|+..++.+++++|+++|+ +++..+.++
T Consensus 131 ~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~-------~~~~~~~~~ 171 (179)
T 3f6q_A 131 VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ-------NLNRIPYKD 171 (179)
T ss_dssp SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC-------CCSCBCCCC
T ss_pred cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc-------CcccCCccc
Confidence 99999999999999999999999999999999 777776654
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.1e-27 Score=210.54 Aligned_cols=156 Identities=18% Similarity=0.163 Sum_probs=143.8
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
..+||.|+..|+.+.++.+++. +.+++..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 76 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA-----DPQLLGKGRESALSLA 76 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHH
T ss_pred cchHHHHHHCCCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC-----CCCCcCCCCCcHHHHH
Confidence 3579999999999999999998 56678899999999999999999999999999864 5889999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|+++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~------------------------------------------------------------- 95 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVDV------------------------------------------------------------- 95 (167)
T ss_dssp HHHTCHHHHHHHHHHTCCT-------------------------------------------------------------
T ss_pred HHcCCHHHHHHHHHCCCCC-------------------------------------------------------------
Confidence 9999999999999998766
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|..|.||||+|+..|+.+++++|++. |+
T Consensus 96 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~ 126 (167)
T 3v31_A 96 ------------------------------------------------NEYDWNGGTPLLYAVHGNHVKCVKMLLES-GA 126 (167)
T ss_dssp ------------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ------------------------------------------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 22445689999999999999999999996 89
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
+++.+|.+|+||||+|+.+|+.+++++|++++.
T Consensus 127 ~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 127 DPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999987
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=2.7e-27 Score=207.21 Aligned_cols=153 Identities=23% Similarity=0.293 Sum_probs=124.1
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
+++|+.|+..|+.+.++.+++. .+.+.+..|..|.||||+ +..|+.+++++|++.|. +++.+|..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGA-----SPNVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHH
Confidence 5678888888888888888887 455677788888888888 88888888888888753 4788888888888888
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|+++
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~------------------------------------------------------------- 94 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADV------------------------------------------------------------- 94 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCS-------------------------------------------------------------
T ss_pred HHcCcHHHHHHHHHcCCCC-------------------------------------------------------------
Confidence 8888888888888887655
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|..|.||||+|+..|+.+++++|++. +
T Consensus 95 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~ 124 (156)
T 1bd8_A 95 ------------------------------------------------NVPDGTGALPIHLAVQEGHTAVVSFLAAE--S 124 (156)
T ss_dssp ------------------------------------------------CCCCTTSCCHHHHHHHHTCHHHHHHHHTT--S
T ss_pred ------------------------------------------------CCcCCCCCcHHHHHHHhChHHHHHHHHhc--c
Confidence 22344578888888888888888888886 7
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHHHhc
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLLLDR 273 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~ 273 (523)
+++.+|.+|+||||+|+.+|+.+++++|+++
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 125 DLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8888888888888888888888888888764
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.7e-27 Score=205.14 Aligned_cols=150 Identities=19% Similarity=0.207 Sum_probs=136.5
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHH
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLA 82 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 82 (523)
+++|+.|+..|+.+.++.+++..+ +.+ .+..|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-----SRDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-----CTTCCCTTCCCHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCC--CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHHH
Confidence 578999999999999999999854 443 58899999999999999999999998763 4889999999999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCC
Q 041922 83 AALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPET 162 (523)
Q Consensus 83 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~ 162 (523)
+..|+.+++++|+++|+++
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~------------------------------------------------------------- 93 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADV------------------------------------------------------------- 93 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCT-------------------------------------------------------------
T ss_pred HHcChHHHHHHHHHcCCCC-------------------------------------------------------------
Confidence 9999999999999998766
Q ss_pred CCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCC
Q 041922 163 PPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPV 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 242 (523)
+.+|..|.||||+|+..|+.+++++|++. |+
T Consensus 94 ------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga 124 (153)
T 1awc_B 94 ------------------------------------------------NAKDMLKMTALHWATEHNHQEVVELLIKY-GA 124 (153)
T ss_dssp ------------------------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ------------------------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 22445689999999999999999999997 89
Q ss_pred cccccccCCCcHHHHHHHcCchhHHHHH
Q 041922 243 AIHDLDSEKKNLVLLAVENRQTGIYKLL 270 (523)
Q Consensus 243 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~L 270 (523)
+++.+|.+|+||||+|+.+|+.+++++|
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 125 DVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999987
No 68
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=2.2e-28 Score=233.20 Aligned_cols=201 Identities=16% Similarity=0.130 Sum_probs=152.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccc----cCCChHHhHHH---HcCCHHHHHHHHhcCcccccccC
Q 041922 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN----DRGDTALHLAA---ALGNEAMCHCMASKDRELISAAD 106 (523)
Q Consensus 34 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d----~~G~TpLh~A~---~~g~~~iv~~Ll~~~~~~~~~~~ 106 (523)
+..|+|+||.|++.|+.+.++.|++..... ...++.++ .+|+||||+|+ +.|+.+++++|++.|++....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~-- 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM-- 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH--
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch--
Confidence 567899999999999999766666622110 12355554 77999999999 779999999999998764210
Q ss_pred CCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhh
Q 041922 107 EGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVH 186 (523)
Q Consensus 107 ~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (523)
T Consensus 79 -------------------------------------------------------------------------------- 78 (260)
T 3jxi_A 79 -------------------------------------------------------------------------------- 78 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCcchhhhhHHHHHHHHHHhc--ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccc--------------cC
Q 041922 187 NKDGNARDETATAAVQELKFMKKK--DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLD--------------SE 250 (523)
Q Consensus 187 ~~~~~~~~~~~~~~~~~v~~Ll~~--~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d--------------~~ 250 (523)
..++.. +..|..|.||||+|+..|+.+++++|++. |++++..| .+
T Consensus 79 ------------------~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
T 3jxi_A 79 ------------------REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRFFQPKDEGGYFYF 139 (260)
T ss_dssp ------------------HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCS
T ss_pred ------------------HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccccCcccccccccC
Confidence 000111 23445799999999999999999999997 89999998 68
Q ss_pred CCcHHHHHHHcCchhHHHHHHh---ccccCCccccccccccCCCCcHhHHHHHhCCCCCccCCcchhhhHHHhHHHHHHH
Q 041922 251 KKNLVLLAVENRQTGIYKLLLD---RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVK 327 (523)
Q Consensus 251 G~t~Lh~A~~~~~~~iv~~Ll~---~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 327 (523)
|+||||+|+.+|+.+++++|++ +|+ ++|.+|.+|+||||+|+..++...- .... ..+.++
T Consensus 140 g~tpL~~A~~~g~~~~v~~Ll~~~~~ga-------~~~~~d~~g~TpLh~A~~~~~~~~~-----~~~~-----~~~~v~ 202 (260)
T 3jxi_A 140 GELPLSLAACTNQPHIVHYLTENGHKQA-------DLRRQDSRGNTVLHALVAIADNTRE-----NTKF-----VTKMYD 202 (260)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSCCC-------CTTCCCTTSCCHHHHHHHHCCSSHH-----HHHH-----HHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccCC-------CCcccCCCCCcHHHHHHHhccCchh-----HHHH-----HHHHHH
Confidence 9999999999999999999999 888 9999999999999999998873210 0000 011222
Q ss_pred hhCCccc--------ccccCCCCCChhHHhhhhh
Q 041922 328 ESMPRYF--------FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 328 ~~~~~~~--------~~~~n~~G~Tpl~la~~~~ 353 (523)
.++..++ .+.+|.+|+||+++|.+..
T Consensus 203 ~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 203 LLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 2222222 2679999999999999764
No 69
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.9e-28 Score=212.85 Aligned_cols=151 Identities=21% Similarity=0.242 Sum_probs=135.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEe
Q 041922 35 RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSW 114 (523)
Q Consensus 35 ~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~ 114 (523)
....||||.|+..|+.+++++|++.+ .+++.+|..|+||||+|+. |+.+++++|+++|+++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~-----~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~------------- 63 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNN-----VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP------------- 63 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSC-----CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-------------
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCC-----CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-------------
Confidence 35679999999999999999999865 3588999999999999999 9999999999998765
Q ss_pred ccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcch
Q 041922 115 SSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARD 194 (523)
Q Consensus 115 ~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (523)
T Consensus 64 -------------------------------------------------------------------------------- 63 (162)
T 1ihb_A 64 -------------------------------------------------------------------------------- 63 (162)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcc
Q 041922 195 ETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRK 274 (523)
Q Consensus 195 ~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 274 (523)
+.++..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+.+|+.+++++|+++|
T Consensus 64 ----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 126 (162)
T 1ihb_A 64 ----------------DLKDRTGFAVIHDAARAGFLDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126 (162)
T ss_dssp ----------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred ----------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc
Confidence 22345689999999999999999999997 8999999999999999999999999999999999
Q ss_pred ccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 275 MLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 275 ~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+. .++.+|..|+||||+|+..++.+++
T Consensus 127 ~~------~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 127 AS------NVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp CC------CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CC------CCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 82 4799999999999999999986543
No 70
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=5.6e-27 Score=212.84 Aligned_cols=155 Identities=19% Similarity=0.220 Sum_probs=142.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+++..|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 37 t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 37 TPLMVACMLGMENAIDKLVEN--FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS-----NVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CHHHHHHHHTCGGGHHHHHHH--HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-----CTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHh--ccccccccccCccHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCCCCcHHHHHH
Confidence 589999999999999999998 56778889999999999999999999999999864 48999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|+++
T Consensus 110 ~~~~~~~v~~Ll~~g~~~-------------------------------------------------------------- 127 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANV-------------------------------------------------------------- 127 (192)
T ss_dssp HHTCHHHHHHHHHTTCCS--------------------------------------------------------------
T ss_pred HcCCHHHHHHHHHCCCCC--------------------------------------------------------------
Confidence 999999999999998766
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCc
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVA 243 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 243 (523)
+.+|..|.||||+|+..|+.+++++|++. |++
T Consensus 128 -----------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~ 159 (192)
T 2rfm_A 128 -----------------------------------------------NDRNLEGETPLIVASKYGRSEIVKKLLEL-GAD 159 (192)
T ss_dssp -----------------------------------------------SCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCC
T ss_pred -----------------------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCC
Confidence 22445689999999999999999999997 899
Q ss_pred ccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 244 IHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 244 ~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
++.+|.+|+||||+|+.+|+.+++++|++++.
T Consensus 160 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 160 ISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHhCcHHHHHHHHhccC
Confidence 99999999999999999999999999998763
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.4e-29 Score=235.04 Aligned_cols=180 Identities=18% Similarity=0.156 Sum_probs=154.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+||.|+..|+.+.++.+++. +.+++.+|..|.||||+|+..|+.+++++|++.|. +++.+|..|+||||+|+
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-----~~n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAGA-----NVNSPDSHGWTPLHCAA 95 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHH
Confidence 468999999999999999998 66788899999999999999999999999999864 59999999999999999
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|++++. +|
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~----------------------------------~~------------------------ 117 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFA----------------------------------TT------------------------ 117 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTC----------------------------------CC------------------------
T ss_pred HcCCHHHHHHHHHcCCCccc----------------------------------cc------------------------
Confidence 99999999999999877632 21
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHH--HHcChHHHHHHHHhhCC
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIA--AKMGVTEMVEKILDTIP 241 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~A--a~~g~~~~v~~Ll~~~~ 241 (523)
+.+|.||||+| +..|+.+++++|++. |
T Consensus 118 --------------------------------------------------~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-g 146 (229)
T 2vge_A 118 --------------------------------------------------LSDGATAFEKCDPYREGYADCATYLADV-E 146 (229)
T ss_dssp --------------------------------------------------SSTTCCTGGGCCTTSTTHHHHHHHHHHH-H
T ss_pred --------------------------------------------------CCCCCCHHHHHHHHhcChHHHHHHHHHc-C
Confidence 12466666666 778999999999998 8
Q ss_pred CcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 242 VAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 242 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
++++..|..|.|++|.++..+. .++|++.|+.. +++.+|.+|+||||+|+..|+.+++
T Consensus 147 a~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~-----~~~~~d~~G~TpL~~A~~~g~~~~v 204 (229)
T 2vge_A 147 QSMGLMNSGAVYALWDYSAEFG---DELSFREGESV-----TVLRRDGPEETDWWWAALHGQEGYV 204 (229)
T ss_dssp HHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEE-----EEEESSCTTCSSEEEEEETTEEEEE
T ss_pred CCcccccCCchHHHHHHhhccc---cccCccccccc-----cccccCCCcccHHHHHHHcCCccee
Confidence 9999999999999997655543 36778888721 3889999999999999999998766
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.6e-27 Score=208.57 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=54.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
++|+.|+..|+.+.++.+++.. +.+.+..+..|.||||+|+..|+.+++++|++.+. +++.+|.+|+||||+|+
T Consensus 10 ~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 10 RQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA-----DVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCC-----CCCccCCCCCCHHHHHH
Confidence 3566666666666666666543 23444555556666666666666666666666542 35566666666666666
Q ss_pred HcCCHHHHHHHHhcCccc
Q 041922 84 ALGNEAMCHCMASKDREL 101 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~ 101 (523)
..|+.+++++|+++|+++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~ 101 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVV 101 (165)
T ss_dssp HTTCHHHHHHHHHTTCCT
T ss_pred HcCcHHHHHHHHhCCCCC
Confidence 666666666666665543
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.8e-27 Score=208.33 Aligned_cols=147 Identities=21% Similarity=0.237 Sum_probs=134.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEecc
Q 041922 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSS 116 (523)
Q Consensus 37 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~ 116 (523)
|.||||.|+..|+.++++.|++.. +.+++.+|..|+||||+ +..|+.+++++|+++|+++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~--------------- 61 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE----LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP--------------- 61 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT----CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT---------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh----CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC---------------
Confidence 579999999999999999999872 23588999999999999 9999999999999998766
Q ss_pred CCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhh
Q 041922 117 GNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDET 196 (523)
Q Consensus 117 ~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (523)
T Consensus 62 -------------------------------------------------------------------------------- 61 (156)
T 1bd8_A 62 -------------------------------------------------------------------------------- 61 (156)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcccc
Q 041922 197 ATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKML 276 (523)
Q Consensus 197 ~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~ 276 (523)
+.+|..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|+++ +
T Consensus 62 --------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~- 124 (156)
T 1bd8_A 62 --------------NVQDTSGTSPVHDAARTGFLDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S- 124 (156)
T ss_dssp --------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S-
T ss_pred --------------CCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c-
Confidence 22445689999999999999999999997 899999999999999999999999999999999 7
Q ss_pred CCccccccccccCCCCcHhHHHHHhCCCCC
Q 041922 277 GESDLNIFEHVDIKGNSALHLAAKFGEYGP 306 (523)
Q Consensus 277 ~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~ 306 (523)
+++.+|.+|+||||+|+..|+.++
T Consensus 125 ------~~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 125 ------DLHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp ------CTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred ------CCCCcCCCCCCHHHHHHHcCcHHH
Confidence 999999999999999999998654
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.7e-27 Score=210.65 Aligned_cols=151 Identities=21% Similarity=0.228 Sum_probs=134.9
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCcee
Q 041922 33 LTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANC 112 (523)
Q Consensus 33 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~ 112 (523)
.|.+|.||||.|+..|+.++++.|++.+. ..++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------- 68 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQS----VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV----------- 68 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTT----TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCC----CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-----------
Confidence 46789999999999999999999998642 457888999999999999999999999999998765
Q ss_pred EeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCc
Q 041922 113 SWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNA 192 (523)
Q Consensus 113 l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (523)
T Consensus 69 -------------------------------------------------------------------------------- 68 (165)
T 3twr_A 69 -------------------------------------------------------------------------------- 68 (165)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHh
Q 041922 193 RDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLD 272 (523)
Q Consensus 193 ~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 272 (523)
+.+|..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+.+|+.+++++|++
T Consensus 69 ------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 69 ------------------HAKDKGGLVPLHNACSYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp ------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------------CccCCCCCCHHHHHHHcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 22445689999999999999999999997 89999999999999999999999999999999
Q ss_pred ccccCCccccccccccCCCCcHhHHHHHhCCCC
Q 041922 273 RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYG 305 (523)
Q Consensus 273 ~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~ 305 (523)
+|+ +++.+|.+|+||||+|+. ++.+
T Consensus 130 ~ga-------~~~~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 130 HGA-------DPTKKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp TTC-------CTTCCCTTSCCTGGGSCT-TCHH
T ss_pred cCC-------CCcccCCCCCChhHhHhc-CChH
Confidence 999 999999999999999776 6643
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=3.5e-27 Score=227.06 Aligned_cols=175 Identities=15% Similarity=0.121 Sum_probs=149.8
Q ss_pred CCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCC
Q 041922 74 RGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKD 153 (523)
Q Consensus 74 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~ 153 (523)
.+.+|+|.|+..|+.+.++.+++.+.+. .+|.+|.+|+||||+|+.
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~--------------------------------~~n~~d~~g~T~Lh~A~~-- 120 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDY--------------------------------VVNIADSNGNTALHYSVS-- 120 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHH--------------------------------HHTCCCTTSCCHHHHHHH--
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhh--------------------------------cCcCCCCCCCCHHHHHHH--
Confidence 4578999999999999999999987643 347889999999998872
Q ss_pred CCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhc-----ccccCCCChHHHHHH---
Q 041922 154 GDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKK-----DQQSGRKATPILIAA--- 225 (523)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~-----~~~~~~g~tpLh~Aa--- 225 (523)
.+..++++.|++. +..+..|.||||+|+
T Consensus 121 --------------------------------------------~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 121 --------------------------------------------HANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp --------------------------------------------TTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred --------------------------------------------CCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 2235688999887 556788999999999
Q ss_pred --HcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCC
Q 041922 226 --KMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGE 303 (523)
Q Consensus 226 --~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~ 303 (523)
..|+.++++.|++. |++.+..|..|+||||+|+.+|+.+++++|+++|+ ++|.+|.+|+||||+|+..|+
T Consensus 157 ~~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga-------d~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDVVKALLACEA-------DVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp CCSHHHHHHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCHHHHHHHHTC
T ss_pred hhhhhhHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCC-------CCCCCCCCCCCHHHHHHHCCC
Confidence 67999999999998 78899999999999999999999999999999999 999999999999999999998
Q ss_pred CCCccCCcchhhhHHHhHHHHHHHhhCC-ccc-ccccCCCCCChhHHhhhhh
Q 041922 304 YGPWRIPGAALQMQWEIKWYKFVKESMP-RYF-FLGYNNKGKTPKEIFTKTH 353 (523)
Q Consensus 304 ~~~~~~~g~~l~~~~~~~~~~~v~~~~~-~~~-~~~~n~~G~Tpl~la~~~~ 353 (523)
.+++ +.++. .++ ++.+|.+|+||+++|.+..
T Consensus 229 ~~iv-------------------~~Ll~~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 229 KEIA-------------------GLLLAVPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp HHHH-------------------HHHHTSTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHH-------------------HHHHhcCCCCCcCcCCCCCCHHHHHHHcC
Confidence 5543 33333 333 6899999999999999764
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=4.9e-27 Score=210.73 Aligned_cols=150 Identities=17% Similarity=0.148 Sum_probs=134.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEe
Q 041922 35 RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSW 114 (523)
Q Consensus 35 ~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~ 114 (523)
+++.++||.|+..|+.++++.|++.+. .+++.+|..|.||||+|+..|+.+++++|++.|++++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------ 66 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTE----NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN------------ 66 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTT----SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC------------
Confidence 568899999999999999999999643 4689999999999999999999999999999987662
Q ss_pred ccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcch
Q 041922 115 SSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARD 194 (523)
Q Consensus 115 ~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (523)
T Consensus 67 -------------------------------------------------------------------------------- 66 (179)
T 3f6q_A 67 -------------------------------------------------------------------------------- 66 (179)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcc
Q 041922 195 ETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRK 274 (523)
Q Consensus 195 ~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 274 (523)
..+..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 67 -----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 128 (179)
T 3f6q_A 67 -----------------VMNRGDDTPLHLAASHGHRDIVQKLLQY-KADINAVNEHGNVPLHYACFWGQDQVAEDLVANG 128 (179)
T ss_dssp -----------------CCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred -----------------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 2344689999999999999999999997 8999999999999999999999999999999999
Q ss_pred ccCCccccccccccCCCCcHhHHHHHhCCCC
Q 041922 275 MLGESDLNIFEHVDIKGNSALHLAAKFGEYG 305 (523)
Q Consensus 275 ~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~ 305 (523)
+ +++.+|.+|+||||+|+..++.+
T Consensus 129 a-------~~~~~~~~g~tpl~~A~~~~~~~ 152 (179)
T 3f6q_A 129 A-------LVSICNKYGEMPVDKAKAPLREL 152 (179)
T ss_dssp C-------CSSBCCTTSCCGGGGSCHHHHHH
T ss_pred C-------CcchhccCCCCcHHHHHHHHHHH
Confidence 9 99999999999999999877643
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=4.1e-27 Score=221.63 Aligned_cols=175 Identities=15% Similarity=0.115 Sum_probs=114.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHH
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAA 83 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~ 83 (523)
.+|+.|+..|+.+.++.+++. +.+++. +..|.||||.|+..|+.++++.|++.+. +++.+|..|+||||+|+
T Consensus 7 t~L~~a~~~~~~~~~~~ll~~--g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 7 VSLPPGKRTNLRKTGSERIAH--GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVD-----DPSLPNDEGITALHNAV 78 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-----SCCCCCTTSCCHHHHHH
T ss_pred ccCchhhhhhhHHHHHHHhcc--CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHH
Confidence 346666666666666666665 344432 3556677777777777777777766542 36666666777777777
Q ss_pred HcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCC
Q 041922 84 ALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETP 163 (523)
Q Consensus 84 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~ 163 (523)
..|+.+++++|+++|+++
T Consensus 79 ~~g~~~~v~~Ll~~ga~~-------------------------------------------------------------- 96 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNV-------------------------------------------------------------- 96 (239)
T ss_dssp HHTCHHHHHHHHHHTCCT--------------------------------------------------------------
T ss_pred HcCCHHHHHHHHHcCCCC--------------------------------------------------------------
Confidence 777777777777666554
Q ss_pred CCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCc
Q 041922 164 PVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVA 243 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 243 (523)
+.+|..|.||||+|+..|+.+++++|+++ |++
T Consensus 97 -----------------------------------------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~ 128 (239)
T 1ycs_B 97 -----------------------------------------------NAADSDGWTPLHCAASCNNVQVCKFLVES-GAA 128 (239)
T ss_dssp -----------------------------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred -----------------------------------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCC
Confidence 34566799999999999999999999997 899
Q ss_pred ccccccCCC-cHHHHH--HHcCchhHHHHHHhccccCCccccccccc---------cCCCCcHhHHHHHhCC
Q 041922 244 IHDLDSEKK-NLVLLA--VENRQTGIYKLLLDRKMLGESDLNIFEHV---------DIKGNSALHLAAKFGE 303 (523)
Q Consensus 244 ~~~~d~~G~-t~Lh~A--~~~~~~~iv~~Ll~~~~~~~~~~~~in~~---------d~~G~TpLH~Aa~~~~ 303 (523)
++..|.+|. ||||+| +.+|+.+++++|+++|+ +++.. |..|.||+|++...|.
T Consensus 129 ~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a-------~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 129 VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE-------KMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH-------HTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh-------cccccccceEEEEeccCCCCCCcccccCCC
Confidence 999998877 999999 88899999999999998 55544 6778899998888876
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.6e-26 Score=202.41 Aligned_cols=145 Identities=17% Similarity=0.095 Sum_probs=112.3
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCc
Q 041922 31 AKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLA 110 (523)
Q Consensus 31 ~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 110 (523)
+..+..|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+ .|+.+++++|+++|+++
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~--------- 70 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGA-----NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP--------- 70 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTC-----CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC---------
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC---------
Confidence 3457789999999999999999999998753 58889999999999985 89999999999988765
Q ss_pred eeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCC
Q 041922 111 NCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDG 190 (523)
Q Consensus 111 l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (523)
T Consensus 71 -------------------------------------------------------------------------------- 70 (156)
T 1bi7_B 71 -------------------------------------------------------------------------------- 70 (156)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhhhHHHHHHHHHHhcccccCCCCh-HHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHH
Q 041922 191 NARDETATAAVQELKFMKKKDQQSGRKAT-PILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKL 269 (523)
Q Consensus 191 ~~~~~~~~~~~~~v~~Ll~~~~~~~~g~t-pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~ 269 (523)
+.+|..|.| |||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+.+|+.+++++
T Consensus 71 --------------------~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 71 --------------------NCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp --------------------CCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred --------------------CCcCCCCCcHHHHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 234456888 99999999999999999998 89999999999999999999999999999
Q ss_pred HHhccccCCccccccccccCCCCcHhHHH
Q 041922 270 LLDRKMLGESDLNIFEHVDIKGNSALHLA 298 (523)
Q Consensus 270 Ll~~~~~~~~~~~~in~~d~~G~TpLH~A 298 (523)
|+++|+ +++.+|..|+||.+-+
T Consensus 130 Ll~~ga-------~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 130 LRAAAG-------GTRGSNHARIDAAEGP 151 (156)
T ss_dssp HSSCC------------------------
T ss_pred HHHcCC-------CCCccCcCcCcccccC
Confidence 999999 9999999999998844
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=9.8e-27 Score=219.02 Aligned_cols=188 Identities=13% Similarity=0.043 Sum_probs=122.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeE
Q 041922 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCS 113 (523)
Q Consensus 34 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l 113 (523)
+..|.||||.|++.|+.+.++.|++.|.+ ++. +..|.||||.|+..|+.+++++|++.|+++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~-----~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~------------ 63 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMR-----VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP------------ 63 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC------------
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCC-----ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC------------
Confidence 35699999999999999999999998753 554 478999999999999999999999998765
Q ss_pred eccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcc
Q 041922 114 WSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNAR 193 (523)
Q Consensus 114 ~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (523)
T Consensus 64 -------------------------------------------------------------------------------- 63 (239)
T 1ycs_B 64 -------------------------------------------------------------------------------- 63 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhc
Q 041922 194 DETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDR 273 (523)
Q Consensus 194 ~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~ 273 (523)
+.+|..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|+++
T Consensus 64 -----------------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 125 (239)
T 1ycs_B 64 -----------------SLPNDEGITALHNAVCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVES 125 (239)
T ss_dssp -----------------CCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -----------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 23445689999999999999999999998 899999999999999999999999999999999
Q ss_pred cccCCccccccccccCCCC-cHhHHH--HHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCcccccccCCCCCChhHHhh
Q 041922 274 KMLGESDLNIFEHVDIKGN-SALHLA--AKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYFFLGYNNKGKTPKEIFT 350 (523)
Q Consensus 274 ~~~~~~~~~~in~~d~~G~-TpLH~A--a~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~~~~~n~~G~Tpl~la~ 350 (523)
|+ +++.+|..|. ||||+| +..|+.+++... +.... .+............+..|++|.+++.
T Consensus 126 ga-------~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L---l~~~a------~~~~~~~~~~~al~d~~~~~~~eLa~ 189 (239)
T 1ycs_B 126 GA-------AVFAMTYSDMQTAADKCEEMEEGYTQCSQFL---YGVQE------KMGIMNKGVIYALWDYEPQNDDELPM 189 (239)
T ss_dssp TC-------CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH---HHHHH------HTTTTGGGEEEESSCBCCSSTTBCCB
T ss_pred CC-------CcceecCCCCcchHHHHHHhhhccHHHHHHH---HHhhh------cccccccceEEEEeccCCCCCCcccc
Confidence 99 9999998887 999999 677887765210 00000 00000111113455888999999887
Q ss_pred hhh
Q 041922 351 KTH 353 (523)
Q Consensus 351 ~~~ 353 (523)
+..
T Consensus 190 ~~G 192 (239)
T 1ycs_B 190 KEG 192 (239)
T ss_dssp CSS
T ss_pred cCC
Confidence 654
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.5e-26 Score=208.52 Aligned_cols=167 Identities=12% Similarity=0.083 Sum_probs=136.4
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccccC-CCCCcHHHHHHHcCCH----HHHHHHHHHhcccccccccccccCCCh
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKLT-RSGDTALHIAAAAGQT----NIVSELVEIMGENASNVLKIQNDRGDT 77 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~-~~g~T~Lh~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~~d~~G~T 77 (523)
.++|+.|+..|+.+.++.++...+ +.++ ..|+||||+|+..|+. +++++|++.|+ ++|.+|.+|+|
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~----~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga-----dvn~~d~~g~T 77 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGY----EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA-----DIKSRTKEGTT 77 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSS----SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC-----CSSCCCTTCCC
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC-----CCCCCCCCCCc
Confidence 367999999999999999998843 2334 6799999999999985 59999999874 59999999999
Q ss_pred HHhHHHHcCC------HHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCC-CccccCC
Q 041922 78 ALHLAAALGN------EAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGK-SSRDSRP 150 (523)
Q Consensus 78 pLh~A~~~g~------~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~-tpLh~a~ 150 (523)
|||+|+..|+ .+++++|+++|+++ +.+|..|+ ||||+|+
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi----------------------------------n~~d~~g~ttpLh~A~ 123 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADI----------------------------------TALYKPYKIVVFKNIF 123 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCS----------------------------------SSCBGGGTBCTTGGGG
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCC----------------------------------CccCCCcCchHHHHHH
Confidence 9999999987 67899999987655 66677777 7777765
Q ss_pred CCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChH
Q 041922 151 DKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVT 230 (523)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~ 230 (523)
.. |.+ ..++.
T Consensus 124 ~~----------------------------------------------------------------~~~------~~~~~ 133 (186)
T 3t8k_A 124 NY----------------------------------------------------------------FVD------ENEMI 133 (186)
T ss_dssp GC----------------------------------------------------------------CSC------HHHHH
T ss_pred Hc----------------------------------------------------------------CCC------hhhHH
Confidence 10 110 12456
Q ss_pred HHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccC
Q 041922 231 EMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDI 289 (523)
Q Consensus 231 ~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~ 289 (523)
+++++|++..|++++.+|..|+||||+|++.|+.+++++|.+... ..+.+|+
T Consensus 134 ~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~-------~~~~~~~ 185 (186)
T 3t8k_A 134 PLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK-------KYNLKEN 185 (186)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH-------HHTCCC-
T ss_pred HHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH-------HHhcccC
Confidence 789999993499999999999999999999999999999998876 6666654
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1e-25 Score=192.40 Aligned_cols=132 Identities=20% Similarity=0.166 Sum_probs=119.9
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCC
Q 041922 28 SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADE 107 (523)
Q Consensus 28 ~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 107 (523)
.+++..+..|.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+. |+.+++++|+++|+++
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~------ 70 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAG-----ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP------ 70 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS------
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcC-----CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC------
Confidence 456788999999999999999999999999975 3588999999999999999 9999999999998766
Q ss_pred CCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhc
Q 041922 108 GLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHN 187 (523)
Q Consensus 108 ~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (523)
T Consensus 71 -------------------------------------------------------------------------------- 70 (136)
T 1d9s_A 71 -------------------------------------------------------------------------------- 70 (136)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcchhhhhHHHHHHHHHHhcccccCC-CChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhH
Q 041922 188 KDGNARDETATAAVQELKFMKKKDQQSGR-KATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGI 266 (523)
Q Consensus 188 ~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~-g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~i 266 (523)
+.+|.. |.||||+|+..|+.+++++|++. +++++.+|..|+||||+|+.+++.++
T Consensus 71 -----------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~ 126 (136)
T 1d9s_A 71 -----------------------NCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHRDI 126 (136)
T ss_dssp -----------------------SCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCHHH
T ss_pred -----------------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 234456 89999999999999999999997 89999999999999999999999999
Q ss_pred HHHHHhccc
Q 041922 267 YKLLLDRKM 275 (523)
Q Consensus 267 v~~Ll~~~~ 275 (523)
+++|+++|+
T Consensus 127 ~~~Ll~~Ga 135 (136)
T 1d9s_A 127 ARYLHAATG 135 (136)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHcCC
Confidence 999999987
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1.3e-25 Score=202.41 Aligned_cols=146 Identities=16% Similarity=0.096 Sum_probs=125.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhcccccccccccc-cCCChHHhHHHHcCCH----HHHHHHHhcCcccccccCCCCce
Q 041922 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN-DRGDTALHLAAALGNE----AMCHCMASKDRELISAADEGLAN 111 (523)
Q Consensus 37 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~A~~~g~~----~iv~~Ll~~~~~~~~~~~~~~~l 111 (523)
+.++||.|++.|+.+.++.+++.+ ++.++ ..|+||||+|+..|+. +++++|+++|++++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~-------~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn--------- 69 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG-------YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK--------- 69 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS-------SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS---------
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC-------cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC---------
Confidence 568999999999999999998753 45566 7899999999999985 59999999998762
Q ss_pred eEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCC
Q 041922 112 CSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGN 191 (523)
Q Consensus 112 ~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (523)
T Consensus 70 -------------------------------------------------------------------------------- 69 (186)
T 3t8k_A 70 -------------------------------------------------------------------------------- 69 (186)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcCh------HHHHHHHHhhCCCcccccccCCC-cHHHHHHHcC--
Q 041922 192 ARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGV------TEMVEKILDTIPVAIHDLDSEKK-NLVLLAVENR-- 262 (523)
Q Consensus 192 ~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~------~~~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~~-- 262 (523)
.+|.+|+||||+|+..|+ .+++++|+++ |++++.+|.+|+ ||||+|+..+
T Consensus 70 --------------------~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 70 --------------------SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp --------------------CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSC
T ss_pred --------------------CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCC
Confidence 234457778888888776 6889999997 999999999999 9999999954
Q ss_pred ---chhHHHHHHh-ccccCCccccccccccCCCCcHhHHHHHhCCCCC
Q 041922 263 ---QTGIYKLLLD-RKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGP 306 (523)
Q Consensus 263 ---~~~iv~~Ll~-~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~ 306 (523)
+.+++++|++ +|+ ++|.+|.+|+||||+|++.++.++
T Consensus 129 ~~~~~~iv~~Ll~~~ga-------d~~~~d~~G~TpL~~A~~~~~~~~ 169 (186)
T 3t8k_A 129 ENEMIPLYKLIFSQSGL-------QLLIKDKWGLTALEFVKRCQKPIA 169 (186)
T ss_dssp HHHHHHHHHHHHTSTTC-------CTTCCCTTSCCHHHHHHTTTCHHH
T ss_pred hhhHHHHHHHHHHhcCC-------CCcccCCCCCCHHHHHHHcCCHHH
Confidence 4569999999 999 999999999999999999998654
No 83
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=8.3e-26 Score=225.61 Aligned_cols=193 Identities=13% Similarity=0.120 Sum_probs=115.3
Q ss_pred HHHHH-cCCHHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHc
Q 041922 7 SKFAM-RGQWDNFVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAAL 85 (523)
Q Consensus 7 ~~Aa~-~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~ 85 (523)
+.|.. .++.+.++.++.+ + .+++||||+||+.|+.++|++|++.+... ...+..|..|.||||+|++.
T Consensus 70 ~~a~~~~~~~~~~~~l~~~--g-------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~--~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 70 YYAHYNRNAKQLWSDAHKK--G-------IKSEVICFVAAITGCSSALDTLCLLLTSD--EIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHTTTTCTTHHHHHHHH--T-------CCHHHHHHHHHHHCCHHHHHHHTTC--CC--SSCC--CHHHHHHHHHHHHT
T ss_pred HHHHhcCCCHHHHHHHHHc--C-------CCcCCHHHHHHHcCCHHHHHHHHHcCCcH--HHHHHhccCCCCHHHHHHHc
Confidence 33443 3566666666655 2 23458888888888888888888776421 12344556677888888888
Q ss_pred CCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCC
Q 041922 86 GNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPV 165 (523)
Q Consensus 86 g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~ 165 (523)
|+.+++++|+++|++... .+++..+ .||||.|+.
T Consensus 139 G~~eiv~~Ll~~gad~~~-----------------------------~~i~~~~---~TpLh~Aa~-------------- 172 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIM-----------------------------AMIQAEN---YHAFRLAAE-------------- 172 (376)
T ss_dssp TCHHHHHHHHHSCTTTHH-----------------------------HHHSHHH---HHHHHHHHH--------------
T ss_pred CCHHHHHHHHhCCCCccc-----------------------------cccCCCC---CCHHHHHHH--------------
Confidence 888888888888764211 0111111 566665551
Q ss_pred CCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcc----c--ccCCCChHHHHHH-HcChHHHHHHHHh
Q 041922 166 LENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKD----Q--QSGRKATPILIAA-KMGVTEMVEKILD 238 (523)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~----~--~~~~g~tpLh~Aa-~~g~~~~v~~Ll~ 238 (523)
.+ ..+++++|+++. . .|.+|.||||+|+ ..|+.+++++|++
T Consensus 173 -----------------------------~G---~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 173 -----------------------------NG---HLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp -----------------------------TT---CHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred -----------------------------CC---CHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 11 234666666651 1 4455677777777 7777777777776
Q ss_pred hCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 239 TIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 239 ~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
. |+ .|+||||+|+.+|+.+++++|+++|+ +++.+| ++++.|+..|+.+++
T Consensus 221 ~-ga-------~~~taL~~Aa~~g~~evv~lL~~~ga-------~~~~~~----~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 221 C-PV-------MLAYAEIHEFEYGEKYVNPFIARHVN-------RLKEMH----DAFKLSNPDGVFDLV 270 (376)
T ss_dssp S-HH-------HHHHHHHCTTTTTTTTHHHHHHHHHH-------HHHHHH----TTTTTTSSSSCCCCS
T ss_pred C-CC-------ccchHHHHHHHCCCHHHHHHHHhcCc-------cccccc----HHHHHHHHCCChhhh
Confidence 3 32 26677777777777777777777766 555443 356666666666544
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3.2e-24 Score=183.17 Aligned_cols=127 Identities=21% Similarity=0.230 Sum_probs=113.9
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCcee
Q 041922 33 LTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANC 112 (523)
Q Consensus 33 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~ 112 (523)
....|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------- 73 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGA-----DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV----------- 73 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------
Confidence 45678999999999999999999999863 58999999999999999999999999999998766
Q ss_pred EeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCc
Q 041922 113 SWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNA 192 (523)
Q Consensus 113 l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (523)
T Consensus 74 -------------------------------------------------------------------------------- 73 (136)
T 2jab_A 74 -------------------------------------------------------------------------------- 73 (136)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHh
Q 041922 193 RDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLD 272 (523)
Q Consensus 193 ~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 272 (523)
+..|..|.||||+|+..|+.+++++|+++ +++++..|.+|+||||+|+.+|+.+++++|++
T Consensus 74 ------------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 74 ------------------NAVDAIGFTPLHLAAFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp ------------------TCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 22445689999999999999999999997 89999999999999999999999999999998
Q ss_pred cc
Q 041922 273 RK 274 (523)
Q Consensus 273 ~~ 274 (523)
.|
T Consensus 135 ~G 136 (136)
T 2jab_A 135 LN 136 (136)
T ss_dssp C-
T ss_pred cC
Confidence 76
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=176.31 Aligned_cols=125 Identities=27% Similarity=0.417 Sum_probs=115.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEec
Q 041922 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWS 115 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~ 115 (523)
+|+||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------------- 61 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-----DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-------------- 61 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC-----CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--------------
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC-----CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC--------------
Confidence 58999999999999999999999864 48889999999999999999999999999998765
Q ss_pred cCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchh
Q 041922 116 SGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDE 195 (523)
Q Consensus 116 ~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (523)
T Consensus 62 -------------------------------------------------------------------------------- 61 (126)
T 1n0r_A 62 -------------------------------------------------------------------------------- 61 (126)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 196 TATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 196 ~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
+.++..|.||||+|+..|+.+++++|+++ +.+++.+|.+|+||||+|+.+++.+++++|+++|+
T Consensus 62 ---------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 62 ---------------NAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp ---------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ---------------cccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 22344689999999999999999999997 89999999999999999999999999999999997
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4.6e-24 Score=186.75 Aligned_cols=106 Identities=17% Similarity=0.061 Sum_probs=77.0
Q ss_pred CCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCc-HHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcH
Q 041922 216 RKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKN-LVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSA 294 (523)
Q Consensus 216 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t-~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~Tp 294 (523)
.|.||||+|+ .|+.+++++|++. +++++.+|..|+| |||+|+.+|+.+++++|+++|+ +++.+|.+|+||
T Consensus 44 ~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga-------~~~~~d~~g~tp 114 (156)
T 1bi7_B 44 YGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA-------RLDVRDAWGRLP 114 (156)
T ss_dssp SSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC-------CSSCCCTTCCCH
T ss_pred CCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCC-------CCcccCCCCCCH
Confidence 3455555553 6889999999997 8999999999999 9999999999999999999999 999999999999
Q ss_pred hHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhhCCccc-ccccCCCCCChhHHh
Q 041922 295 LHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKESMPRYF-FLGYNNKGKTPKEIF 349 (523)
Q Consensus 295 LH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~~~~~~-~~~~n~~G~Tpl~la 349 (523)
||+|+..++.++ ++.++..+. .+.+|..|.||.+-.
T Consensus 115 l~~A~~~~~~~~-------------------v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 115 VDLAEELGHRDV-------------------ARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHH-------------------HHHHSSCC-----------------
T ss_pred HHHHHHhCHHHH-------------------HHHHHHcCCCCCccCcCcCcccccC
Confidence 999999998543 344555555 688999999998744
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=2.6e-24 Score=183.69 Aligned_cols=123 Identities=16% Similarity=0.115 Sum_probs=110.9
Q ss_pred ccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCc
Q 041922 66 NVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSS 145 (523)
Q Consensus 66 ~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tp 145 (523)
.+++.+|..|.||||+|++.|+.+++++|+++|+++ +.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------------------------~~-------- 40 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP----------------------------------NA-------- 40 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT----------------------------------TC--------
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc----------------------------------CC--------
Confidence 468999999999999999999999999999998765 22
Q ss_pred cccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHH
Q 041922 146 RDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAA 225 (523)
Q Consensus 146 Lh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa 225 (523)
++..|.||||+|+
T Consensus 41 -------------------------------------------------------------------~~~~g~t~L~~A~ 53 (136)
T 1d9s_A 41 -------------------------------------------------------------------LNRFGRRPIQVMM 53 (136)
T ss_dssp -------------------------------------------------------------------CCTTCCTTTTTST
T ss_pred -------------------------------------------------------------------cCCCCCCHHHHHH
Confidence 3345777777788
Q ss_pred HcChHHHHHHHHhhCCCcccccccC-CCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCC
Q 041922 226 KMGVTEMVEKILDTIPVAIHDLDSE-KKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEY 304 (523)
Q Consensus 226 ~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 304 (523)
. |+.+++++|++. +++++.+|.. |+||||+|+.+|+.+++++|+++|+ +++.+|.+|+||||+|+..++.
T Consensus 54 ~-~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~d~~g~tpl~~A~~~~~~ 124 (136)
T 1d9s_A 54 M-GSAQVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA-------RLDVCDAWGRLPVDLAEEQGHR 124 (136)
T ss_dssp T-SCHHHHHHHHHH-TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCC-------CCCCCSSSSSCHHHHHHHHTCH
T ss_pred c-CCHHHHHHHHHC-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCCccCCCCCCHHHHHHHcCCH
Confidence 8 999999999998 8999999999 9999999999999999999999999 9999999999999999999986
Q ss_pred CC
Q 041922 305 GP 306 (523)
Q Consensus 305 ~~ 306 (523)
++
T Consensus 125 ~~ 126 (136)
T 1d9s_A 125 DI 126 (136)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=7.3e-24 Score=181.08 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=90.9
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCce
Q 041922 32 KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLAN 111 (523)
Q Consensus 32 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l 111 (523)
.+|.+|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--------- 70 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGS-----DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN--------- 70 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-----CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc---------
Confidence 456777788888888888888877777643 467777777788888887777777777777766541
Q ss_pred eEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCC
Q 041922 112 CSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGN 191 (523)
Q Consensus 112 ~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (523)
T Consensus 71 -------------------------------------------------------------------------------- 70 (137)
T 3c5r_A 71 -------------------------------------------------------------------------------- 70 (137)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHH
Q 041922 192 ARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLL 271 (523)
Q Consensus 192 ~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll 271 (523)
.+|..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+..+..+++++|.
T Consensus 71 --------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 71 --------------------TTGYQNDSPLHDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp --------------------CCCGGGCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred --------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 2233467777777777777777777775 7777777777777777777777777776666
Q ss_pred hccc
Q 041922 272 DRKM 275 (523)
Q Consensus 272 ~~~~ 275 (523)
+.+.
T Consensus 130 ~~~~ 133 (137)
T 3c5r_A 130 KNES 133 (137)
T ss_dssp ----
T ss_pred cccc
Confidence 5543
No 89
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=3.7e-23 Score=201.04 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=110.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhcccccccccc------cccCCChHHhHHHHc---CCHHHHHHHHhcCcccccccCC
Q 041922 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKI------QNDRGDTALHLAAAL---GNEAMCHCMASKDRELISAADE 107 (523)
Q Consensus 37 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~------~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~ 107 (523)
+.++||.|+..|+.+.++.|++.+. +++. +|..|+||||+|+.. |+.+++++|+++|+++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~-----d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv------ 219 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQ-----DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL------ 219 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTC-----CTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT------
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCC-----cccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC------
Confidence 3456888888888888888877653 2444 577788888888876 7788888888777655
Q ss_pred CCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhc
Q 041922 108 GLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHN 187 (523)
Q Consensus 108 ~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (523)
T Consensus 220 -------------------------------------------------------------------------------- 219 (301)
T 2b0o_E 220 -------------------------------------------------------------------------------- 219 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHH
Q 041922 188 KDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIY 267 (523)
Q Consensus 188 ~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv 267 (523)
+.+|.+|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+..++.+++
T Consensus 220 -----------------------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~iv 275 (301)
T 2b0o_E 220 -----------------------DAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECE 275 (301)
T ss_dssp -----------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCHHHH
T ss_pred -----------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 33456799999999999999999999997 999999999999999999999999999
Q ss_pred HHHHhccccCCccccccccccCCCCcHhHHHHHhCCC
Q 041922 268 KLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEY 304 (523)
Q Consensus 268 ~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 304 (523)
++|+++|+ + .|+||||+|+..|+.
T Consensus 276 ~~Ll~~ga-------~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 276 ELLEQAQA-------G------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHH-------H------TTSSCCC--------
T ss_pred HHHHHhcC-------C------CCCChhHHHHhcCCc
Confidence 99999998 4 589999999998873
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=5.3e-23 Score=175.71 Aligned_cols=85 Identities=20% Similarity=0.179 Sum_probs=79.1
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGN 292 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~ 292 (523)
+|..|.||||+|+..|+.+++++|++. +++++.+|..|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+
T Consensus 39 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~ 110 (137)
T 3c5r_A 39 KDHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA-------SRNAVNIFGL 110 (137)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCCCCCCCCC
Confidence 345689999999999999999999997 89999999999999999999999999999999999 9999999999
Q ss_pred cHhHHHHHhCCCC
Q 041922 293 SALHLAAKFGEYG 305 (523)
Q Consensus 293 TpLH~Aa~~~~~~ 305 (523)
||||+|+..+..+
T Consensus 111 tpl~~A~~~~~~~ 123 (137)
T 3c5r_A 111 RPVDYTDDESMKS 123 (137)
T ss_dssp CGGGGCCCHHHHH
T ss_pred CHHHHHhhccHHH
Confidence 9999998776644
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=4.3e-24 Score=201.54 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=66.3
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccc-cCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLD-SEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKG 291 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G 291 (523)
+|..|.||||+|+..|+.+++++|++. |++++.+| ..|+||||+|+.+|+.+++++|+++|+ +++.+|.+|
T Consensus 73 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------~~~~~d~~g 144 (244)
T 3ui2_A 73 VDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA-------DIEVEDERG 144 (244)
T ss_dssp BCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTC
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-------CCCCCCCCC
Confidence 344578888888888888888888886 78888777 778888888888888888888888887 888888888
Q ss_pred CcHhHHHHHhCC
Q 041922 292 NSALHLAAKFGE 303 (523)
Q Consensus 292 ~TpLH~Aa~~~~ 303 (523)
+||||+|+..++
T Consensus 145 ~t~l~~A~~~~~ 156 (244)
T 3ui2_A 145 LTALELAREILK 156 (244)
T ss_dssp CCHHHHHHHHHT
T ss_pred CcHHHHHHHHHh
Confidence 888888876443
No 92
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=6.3e-23 Score=175.05 Aligned_cols=86 Identities=21% Similarity=0.222 Sum_probs=80.8
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGN 292 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~ 292 (523)
.|..|.||||+|+..|+.+++++|++. +++++..|.+|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------~~~~~~~~g~ 114 (136)
T 2jab_A 43 KDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA-------DVNAQDKFGK 114 (136)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCcCcCCCCC
Confidence 345689999999999999999999997 89999999999999999999999999999999999 9999999999
Q ss_pred cHhHHHHHhCCCCC
Q 041922 293 SALHLAAKFGEYGP 306 (523)
Q Consensus 293 TpLH~Aa~~~~~~~ 306 (523)
||||+|+..++.++
T Consensus 115 tpl~~A~~~~~~~~ 128 (136)
T 2jab_A 115 TAFDISIGNGNEDL 128 (136)
T ss_dssp CHHHHHHHTTCHHH
T ss_pred CHHHHHHHCCCHHH
Confidence 99999999998654
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=2.8e-23 Score=193.02 Aligned_cols=129 Identities=22% Similarity=0.191 Sum_probs=104.5
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhc-CcccccccCCCCc
Q 041922 32 KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASK-DRELISAADEGLA 110 (523)
Q Consensus 32 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~ 110 (523)
..+..|.||||+||..|+.++++.|++.+. +++.+|..|+||||+|+..|+.+++++|++. |+++
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~--------- 133 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRV-----GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL--------- 133 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC---------
T ss_pred ccccccccccccccccCcHHHHHHHHhCCC-----CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc---------
Confidence 345577899999999999999999998753 4888899999999999999999999999987 6554
Q ss_pred eeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCC
Q 041922 111 NCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDG 190 (523)
Q Consensus 111 l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (523)
T Consensus 134 -------------------------------------------------------------------------------- 133 (222)
T 3ehr_A 134 -------------------------------------------------------------------------------- 133 (222)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHH
Q 041922 191 NARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLL 270 (523)
Q Consensus 191 ~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~L 270 (523)
+.+|..|.||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..++.++++.|
T Consensus 134 --------------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 134 --------------------NQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp --------------------CCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred --------------------cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 23445688899999999999999999998 899999999999999999999999999999
Q ss_pred Hhccc
Q 041922 271 LDRKM 275 (523)
Q Consensus 271 l~~~~ 275 (523)
++.++
T Consensus 193 ~~~~~ 197 (222)
T 3ehr_A 193 QGTDA 197 (222)
T ss_dssp -----
T ss_pred hccch
Confidence 99988
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=2.2e-22 Score=181.04 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=78.0
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccc-cCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLD-SEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKG 291 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G 291 (523)
+|..|.||||+|+..|+.+++++|++. +++++.+| .+|+||||+|+..|+.+++++|+++|+ +++.+|.+|
T Consensus 72 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-------~~~~~d~~g 143 (183)
T 3deo_A 72 VDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA-------DIEVEDERG 143 (183)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTC-------CTTCCCTTS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC-------CCcCCCCCC
Confidence 445699999999999999999999997 89999998 899999999999999999999999999 999999999
Q ss_pred CcHhHHHHHhCC
Q 041922 292 NSALHLAAKFGE 303 (523)
Q Consensus 292 ~TpLH~Aa~~~~ 303 (523)
+||||+|++.++
T Consensus 144 ~tpl~~A~~~~~ 155 (183)
T 3deo_A 144 LTALELAREILK 155 (183)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHhcc
Confidence 999999998765
No 95
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=9.2e-24 Score=210.84 Aligned_cols=168 Identities=11% Similarity=0.022 Sum_probs=134.2
Q ss_pred CCCcHHHHHHH-cCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEe
Q 041922 36 SGDTALHIAAA-AGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSW 114 (523)
Q Consensus 36 ~g~T~Lh~Aa~-~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~ 114 (523)
.+.+++++|+. .++.++++++++.+ .+++||||+|++.|+.+++++|++.|+....
T Consensus 64 ~~ll~~~~a~~~~~~~~~~~~l~~~g------------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~----------- 120 (376)
T 2aja_A 64 RQLLCLYYAHYNRNAKQLWSDAHKKG------------IKSEVICFVAAITGCSSALDTLCLLLTSDEI----------- 120 (376)
T ss_dssp HHHHHHHHHHTTTTCTTHHHHHHHHT------------CCHHHHHHHHHHHCCHHHHHHHTTC--CCSS-----------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHcC------------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH-----------
Confidence 35688898887 58889999998764 3456999999999999999999999884311
Q ss_pred ccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcch
Q 041922 115 SSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARD 194 (523)
Q Consensus 115 ~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (523)
.+..|..|.||||.|+.
T Consensus 121 --------------------~~~~~~~~~tpL~~Aa~------------------------------------------- 137 (376)
T 2aja_A 121 --------------------VKVIQAENYQAFRLAAE------------------------------------------- 137 (376)
T ss_dssp --------------------CC--CHHHHHHHHHHHH-------------------------------------------
T ss_pred --------------------HHHhccCCCCHHHHHHH-------------------------------------------
Confidence 12234457789998872
Q ss_pred hhhhHHHHHHHHHHhccc------ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccc--cccCCCcHHHHHH-HcCchh
Q 041922 195 ETATAAVQELKFMKKKDQ------QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHD--LDSEKKNLVLLAV-ENRQTG 265 (523)
Q Consensus 195 ~~~~~~~~~v~~Ll~~~~------~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~--~d~~G~t~Lh~A~-~~~~~~ 265 (523)
.+ ..+++++|+++.. .+..+.||||+|+..|+.+++++|+++ |++++. .|.+|+||||+|+ .+|+.+
T Consensus 138 ~G---~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~-ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 138 NG---HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL-APTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp TT---CHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHS-CGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred cC---CHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 22 3568888888742 112239999999999999999999997 888887 8999999999999 999999
Q ss_pred HHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 266 IYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 266 iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
++++|+++|+ . |+||||+|+..|+.+++
T Consensus 214 iv~~Ll~~ga-------~-------~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 214 VINFLLDCPV-------M-------LAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp HHHHHTTSHH-------H-------HHHHHHCTTTTTTTTHH
T ss_pred HHHHHHhCCC-------c-------cchHHHHHHHCCCHHHH
Confidence 9999999876 3 89999999999998865
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=3.3e-22 Score=167.34 Aligned_cols=81 Identities=22% Similarity=0.172 Sum_probs=75.6
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGN 292 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~ 292 (523)
.|..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+..|+.+++++|+++|+ +++.+|.+|+
T Consensus 36 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-------~~~~~~~~g~ 107 (123)
T 3aaa_C 36 TLEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGA-------DKTVKGPDGL 107 (123)
T ss_dssp CCTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCCCcCCCCC
Confidence 345689999999999999999999997 89999999999999999999999999999999999 9999999999
Q ss_pred cHhHHHHHh
Q 041922 293 SALHLAAKF 301 (523)
Q Consensus 293 TpLH~Aa~~ 301 (523)
||||+|...
T Consensus 108 t~l~~A~~~ 116 (123)
T 3aaa_C 108 TAFEATDNQ 116 (123)
T ss_dssp CHHHHCCCH
T ss_pred CHHHHhCCH
Confidence 999999543
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=2e-22 Score=168.74 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=101.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeE
Q 041922 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCS 113 (523)
Q Consensus 34 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l 113 (523)
+..|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------ 66 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGE-----DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI------------ 66 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTC-----CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT------------
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCC-----CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------------
Confidence 5678999999999999999999999763 48999999999999999999999999999998766
Q ss_pred eccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcc
Q 041922 114 WSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNAR 193 (523)
Q Consensus 114 ~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (523)
T Consensus 67 -------------------------------------------------------------------------------- 66 (123)
T 3aaa_C 67 -------------------------------------------------------------------------------- 66 (123)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchh
Q 041922 194 DETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTG 265 (523)
Q Consensus 194 ~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~ 265 (523)
+.+|..|+||||+|+..|+.+++++|++. +++++.+|.+|+||||+|...+..+
T Consensus 67 -----------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 67 -----------------NAPDKHHITPLLSAVYEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp -----------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred -----------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 23445689999999999999999999997 8999999999999999995444433
No 98
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=4.7e-22 Score=166.70 Aligned_cols=86 Identities=28% Similarity=0.393 Sum_probs=80.5
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGN 292 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~ 292 (523)
.+..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..++.+++++|+++|+ +++.+|.+|+
T Consensus 31 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~-------~~~~~~~~g~ 102 (126)
T 1n0r_A 31 KDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-------DVNAKDKNGR 102 (126)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSC
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCC-------CCcccCCCCC
Confidence 344689999999999999999999997 89999999999999999999999999999999999 9999999999
Q ss_pred cHhHHHHHhCCCCC
Q 041922 293 SALHLAAKFGEYGP 306 (523)
Q Consensus 293 TpLH~Aa~~~~~~~ 306 (523)
||||+|+..++.++
T Consensus 103 t~l~~A~~~~~~~~ 116 (126)
T 1n0r_A 103 TPLHLAARNGHLEV 116 (126)
T ss_dssp CHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCcHHH
Confidence 99999999998654
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=7.3e-22 Score=191.87 Aligned_cols=139 Identities=16% Similarity=0.099 Sum_probs=115.8
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccc------cCCCCCcHHHHHHHc---CCHHHHHHHHHHhccccccccccccc
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAK------LTRSGDTALHIAAAA---GQTNIVSELVEIMGENASNVLKIQND 73 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~------~~~~g~T~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~d~ 73 (523)
.++|+.|+..|+.+.++.++.. +.+++. .+..|+||||+|+.. |+.+++++|++.|. +++.+|.
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga-----dvn~~d~ 224 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-----HLDAKAA 224 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS-----CTTCCCT
T ss_pred HHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC-----CCCCCCC
Confidence 3679999999999999999988 455555 588999999999997 89999999999864 5999999
Q ss_pred CCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCC
Q 041922 74 RGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKD 153 (523)
Q Consensus 74 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~ 153 (523)
+|+||||+|+..|+.+++++|+++|+++
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~---------------------------------------------------- 252 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALV---------------------------------------------------- 252 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCC----------------------------------------------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC----------------------------------------------------
Confidence 9999999999999999999999999876
Q ss_pred CCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHH
Q 041922 154 GDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMV 233 (523)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v 233 (523)
+.+|..|.||||+|+..|+.+++
T Consensus 253 ---------------------------------------------------------~~~d~~G~TpL~~A~~~~~~~iv 275 (301)
T 2b0o_E 253 ---------------------------------------------------------GTVNEAGETALDIARKKHHKECE 275 (301)
T ss_dssp ---------------------------------------------------------SCCCTTSCCHHHHHHHHTCHHHH
T ss_pred ---------------------------------------------------------CCcCCCCCCHHHHHHHcCCHHHH
Confidence 23455689999999999999999
Q ss_pred HHHHhhCCCcccccccCCCcHHHHHHHcCch
Q 041922 234 EKILDTIPVAIHDLDSEKKNLVLLAVENRQT 264 (523)
Q Consensus 234 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~ 264 (523)
++|++. +++ .|.||||+|++.|+.
T Consensus 276 ~~Ll~~-ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 276 ELLEQA-QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHH-HHH------TTSSCCC--------
T ss_pred HHHHHh-cCC------CCCChhHHHHhcCCc
Confidence 999997 543 689999999998864
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=3.3e-22 Score=185.74 Aligned_cols=159 Identities=16% Similarity=0.126 Sum_probs=128.7
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhcc-----c-----ccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccc
Q 041922 33 LTRSGDTALHIAAAAGQTNIVSELVEIMGE-----N-----ASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELI 102 (523)
Q Consensus 33 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~-----~-----~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 102 (523)
.+.+++++.+++.+.|....+..+.+.+.. + ....++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~- 99 (222)
T 3ehr_A 21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV- 99 (222)
T ss_dssp SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-
T ss_pred CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCc-
Confidence 355667777777777765443332221100 0 01235567888999999999999999999999998765
Q ss_pred cccCCCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHH
Q 041922 103 SAADEGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESA 182 (523)
Q Consensus 103 ~~~~~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 182 (523)
T Consensus 100 -------------------------------------------------------------------------------- 99 (222)
T 3ehr_A 100 -------------------------------------------------------------------------------- 99 (222)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcC
Q 041922 183 VAVHNKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENR 262 (523)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 262 (523)
+.+|..|.||||+|+..|+.+++++|++..+++++.+|.+|+||||+|+.+|
T Consensus 100 ----------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 100 ----------------------------NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp ----------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ----------------------------cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 2234568999999999999999999999778999999999999999999999
Q ss_pred chhHHHHHHhccccCCccccccccccCCCCcHhHHHHHhCCCCCc
Q 041922 263 QTGIYKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAKFGEYGPW 307 (523)
Q Consensus 263 ~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~~ 307 (523)
+.+++++|+++|+ +++.+|.+|+||||+|+..++.+++
T Consensus 152 ~~~~v~~Ll~~ga-------~~~~~~~~g~t~l~~A~~~~~~~~l 189 (222)
T 3ehr_A 152 YADIVQLLLAKGA-------RTDLRNIEKKLAFDMATNAACASLL 189 (222)
T ss_dssp CHHHHHHHHHHTC-------CSCCCCTTSCCHHHHCCSHHHHHHH
T ss_pred CHHHHHHHHHcCC-------CCccccCCCCCHHHHhcchhHHHHH
Confidence 9999999999999 9999999999999999988775443
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=6.8e-21 Score=171.22 Aligned_cols=116 Identities=23% Similarity=0.239 Sum_probs=89.4
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCcee
Q 041922 33 LTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLANC 112 (523)
Q Consensus 33 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l~ 112 (523)
.+.+|+||||+|+..|+.++++.|++ + .+++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-----~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--------- 104 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-D-----RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH--------- 104 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-T-----SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-c-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc---------
Confidence 35577888888888888888888887 3 34788888888888888888888888888888776522
Q ss_pred EeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCc
Q 041922 113 SWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNA 192 (523)
Q Consensus 113 l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (523)
T Consensus 105 -------------------------------------------------------------------------------- 104 (183)
T 3deo_A 105 -------------------------------------------------------------------------------- 104 (183)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhHHHHHHHHHHhccccc-CCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCch
Q 041922 193 RDETATAAVQELKFMKKKDQQS-GRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQT 264 (523)
Q Consensus 193 ~~~~~~~~~~~v~~Ll~~~~~~-~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~ 264 (523)
++ ..|.||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|++.++.
T Consensus 105 --------------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 105 --------------------RDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp --------------------CCSSSSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred --------------------CCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhccC
Confidence 22 3577888888888888888888876 778888888888888888776544
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=4.6e-21 Score=184.10 Aligned_cols=127 Identities=16% Similarity=0.134 Sum_probs=106.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHHhccccccc-ccccccCCChHHhHHHHc---CCHHHHHHHHhcCcccccccCCCCceeEe
Q 041922 39 TALHIAAAAGQTNIVSELVEIMGENASNV-LKIQNDRGDTALHLAAAL---GNEAMCHCMASKDRELISAADEGLANCSW 114 (523)
Q Consensus 39 T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~-~~~~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~l~l~ 114 (523)
++||.|+..|+.+.++.+++.+.+-.... ++..|..|+||||+|+.. |+.+++++|+++|+++
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i------------- 198 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL------------- 198 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-------------
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-------------
Confidence 68888888899888888888765322122 666688888999999888 8888899888888766
Q ss_pred ccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCCcch
Q 041922 115 SSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGNARD 194 (523)
Q Consensus 115 ~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (523)
T Consensus 199 -------------------------------------------------------------------------------- 198 (278)
T 1dcq_A 199 -------------------------------------------------------------------------------- 198 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhcc
Q 041922 195 ETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRK 274 (523)
Q Consensus 195 ~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 274 (523)
+.+|..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 199 ----------------n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 199 ----------------DKQTGKGSTALHYCCLTDNAECLKLLLRG-KASIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp ----------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----------------cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 23455689999999999999999999996 8999999999999999999999999999999998
Q ss_pred c
Q 041922 275 M 275 (523)
Q Consensus 275 ~ 275 (523)
+
T Consensus 262 a 262 (278)
T 1dcq_A 262 S 262 (278)
T ss_dssp T
T ss_pred C
Confidence 7
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=7.3e-21 Score=189.15 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=114.3
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHHHhcccccccccccc--cCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCce
Q 041922 35 RSGDTALHIAAAA-GQTNIVSELVEIMGENASNVLKIQN--DRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLAN 111 (523)
Q Consensus 35 ~~g~T~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~~d--~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l 111 (523)
..+.|+||.|+.. |+.++++.|++.|. +++..| ..|.||||+|+..|+.+++++|+++|+++
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Ga-----dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv---------- 261 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGA-----DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV---------- 261 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTC-----CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----------
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCC-----CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC----------
Confidence 3456899999999 99999999999864 478887 89999999999999999999999998876
Q ss_pred eEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCC
Q 041922 112 CSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGN 191 (523)
Q Consensus 112 ~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (523)
T Consensus 262 -------------------------------------------------------------------------------- 261 (368)
T 3jue_A 262 -------------------------------------------------------------------------------- 261 (368)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHH
Q 041922 192 ARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLL 271 (523)
Q Consensus 192 ~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll 271 (523)
+..|..|.||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..++.+++++|+
T Consensus 262 -------------------n~~d~~G~TpLh~A~~~g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 262 -------------------NQADSAGRGPLHHATILGHTGLACLFLKR-GADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp -------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -------------------CCCCCCCCCHHHHHHHcCcHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 23445689999999999999999999997 8999999999999999999999999999999
Q ss_pred hccccCCccccccccccCCCCcHhHHHHHhCC
Q 041922 272 DRKMLGESDLNIFEHVDIKGNSALHLAAKFGE 303 (523)
Q Consensus 272 ~~~~~~~~~~~~in~~d~~G~TpLH~Aa~~~~ 303 (523)
+.+.... .....+..|.|+++++.....
T Consensus 322 ~~~~~~~----~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 322 LAKMREA----EAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHC----------------------------
T ss_pred HcCCCcc----cccccCCCCCCHHHHHHHHHh
Confidence 8875321 455677889999998876543
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=5.4e-21 Score=180.19 Aligned_cols=55 Identities=11% Similarity=0.097 Sum_probs=36.8
Q ss_pred HHHHHHhc----ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 203 ELKFMKKK----DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 203 ~v~~Ll~~----~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
++++|+++ +.+|..|.||||+|+..++ +..+.||||+|+..|+.+++++|++++.
T Consensus 126 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 126 VVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 44444444 4455667888888875221 2567888888888888888888887654
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.4e-20 Score=194.42 Aligned_cols=137 Identities=14% Similarity=0.092 Sum_probs=110.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhccccccccccc------ccCCChHHhHHHH---cCCHHHHHHHHhcCcccccccC
Q 041922 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQ------NDRGDTALHLAAA---LGNEAMCHCMASKDRELISAAD 106 (523)
Q Consensus 36 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~------d~~G~TpLh~A~~---~g~~~iv~~Ll~~~~~~~~~~~ 106 (523)
...+.||.|+..|+.+.++.|++.|. ++|.+ |..|.||||+||+ .|+.+++++|+++|+++
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~-----~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v----- 200 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQ-----DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----- 200 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTC-----CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-----
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcc-----cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-----
Confidence 34478999999999999999999864 36655 8889999999976 89999999999998776
Q ss_pred CCCceeEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhh
Q 041922 107 EGLANCSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVH 186 (523)
Q Consensus 107 ~~~~l~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (523)
T Consensus 201 -------------------------------------------------------------------------------- 200 (497)
T 3lvq_E 201 -------------------------------------------------------------------------------- 200 (497)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCcchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhH
Q 041922 187 NKDGNARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGI 266 (523)
Q Consensus 187 ~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~i 266 (523)
+.+|.+|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+|+..|+.++
T Consensus 201 ------------------------n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~ 255 (497)
T 3lvq_E 201 ------------------------DAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKEC 255 (497)
T ss_dssp ------------------------TCCCSSSCCHHHHHTTTTCHHHHHHHHHT-CCCCSCCCTTCCCHHHHHHHTTCHHH
T ss_pred ------------------------CccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 33455789999999999999999999997 99999999999999999999999999
Q ss_pred HHHHHhccccCCccccccccccCCCCcHhHHHHH
Q 041922 267 YKLLLDRKMLGESDLNIFEHVDIKGNSALHLAAK 300 (523)
Q Consensus 267 v~~Ll~~~~~~~~~~~~in~~d~~G~TpLH~Aa~ 300 (523)
+++|+++|+ +++. ||+|.+..
T Consensus 256 ~~~Ll~~ga-------~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 256 EELLEQAQA-------GTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHHHTCC-------------------------
T ss_pred HHHHHHhCC-------CCCC------Ccceeecc
Confidence 999999999 7666 57776654
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=2.7e-20 Score=153.57 Aligned_cols=75 Identities=23% Similarity=0.216 Sum_probs=67.9
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCC
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGN 292 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~ 292 (523)
.|..|.||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+..++.+++++|+++|+ ++|.++..|.
T Consensus 38 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga-------~~n~~~~~~~ 109 (115)
T 2l6b_A 38 RSKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA-------DVNARSWGSS 109 (115)
T ss_dssp CCSSSCCTTHHHHTTTCHHHHHHHTTT-TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSS-------SHHHHSCCCC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCC-------CCCcCCcccc
Confidence 344688999999999999999999997 89999999999999999999999999999999999 9999999999
Q ss_pred cHh
Q 041922 293 SAL 295 (523)
Q Consensus 293 TpL 295 (523)
||-
T Consensus 110 ~~~ 112 (115)
T 2l6b_A 110 HHH 112 (115)
T ss_dssp ---
T ss_pred ccc
Confidence 984
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=3e-20 Score=184.69 Aligned_cols=114 Identities=19% Similarity=0.165 Sum_probs=81.8
Q ss_pred CCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcH
Q 041922 215 GRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSA 294 (523)
Q Consensus 215 ~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~Tp 294 (523)
..|.||||+|+..|+.+++++|+++ |++++..|.+|+||||+|+..|+.+++++|+++|+ +++.+|.+|+||
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Ga-------d~~~~d~~G~Tp 304 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHATILGHTGLACLFLKRGA-------DLGARDSEGRDP 304 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------CTTCCCTTSCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcC-------CCCCcCCCCCCH
Confidence 4689999999999999999999997 99999999999999999999999999999999999 999999999999
Q ss_pred hHHHHHhCCCCCccCCcchhhhHHHhHHHHHHHhh-CCcccccccCCCCCChhHHhhhh
Q 041922 295 LHLAAKFGEYGPWRIPGAALQMQWEIKWYKFVKES-MPRYFFLGYNNKGKTPKEIFTKT 352 (523)
Q Consensus 295 LH~Aa~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~-~~~~~~~~~n~~G~Tpl~la~~~ 352 (523)
||+|+..++.+++. .+... .........+..+.|+++++...
T Consensus 305 L~~A~~~g~~~iv~----------------lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 305 LTIAMETANADIVT----------------LLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHTTCHHHHH----------------HHHHHHC----------------------
T ss_pred HHHHHHCCCHHHHH----------------HHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999966531 11111 11111345677899999998764
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=9.4e-20 Score=144.19 Aligned_cols=62 Identities=26% Similarity=0.386 Sum_probs=50.8
Q ss_pred ccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccc
Q 041922 213 QSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKM 275 (523)
Q Consensus 213 ~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 275 (523)
+|..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|+++|+
T Consensus 31 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 31 KDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 344578888888888888888888886 78888888888888888888888888888888876
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=6.9e-20 Score=175.87 Aligned_cols=93 Identities=25% Similarity=0.267 Sum_probs=83.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcc----ccccCCCCCcHHHHHHHc---CCHHHHHHHHHHhcccccccccccccCCC
Q 041922 4 NCLSKFAMRGQWDNFVQAYENNPMSR----EAKLTRSGDTALHIAAAA---GQTNIVSELVEIMGENASNVLKIQNDRGD 76 (523)
Q Consensus 4 ~~L~~Aa~~g~~~~v~~ll~~~~~~~----~~~~~~~g~T~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~ 76 (523)
.+|+.|+..|+.+.+..++....... ++..|..|.||||+|+.. |+.+++++|++.|. ++|.+|.+|+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga-----~in~~d~~g~ 206 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG-----NLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS-----CTTCCCTTCC
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC-----CccccCCCCC
Confidence 57999999999999999999854432 455688999999999999 99999999999864 5999999999
Q ss_pred hHHhHHHHcCCHHHHHHHHhcCccc
Q 041922 77 TALHLAAALGNEAMCHCMASKDREL 101 (523)
Q Consensus 77 TpLh~A~~~g~~~iv~~Ll~~~~~~ 101 (523)
||||+|+..|+.+++++|+++|+++
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASI 231 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999876
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=2.1e-19 Score=187.29 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=83.6
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccc------CCCCCcHHHHHHH---cCCHHHHHHHHHHhccccccccccccc
Q 041922 3 VNCLSKFAMRGQWDNFVQAYENNPMSREAKL------TRSGDTALHIAAA---AGQTNIVSELVEIMGENASNVLKIQND 73 (523)
Q Consensus 3 ~~~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~------~~~g~T~Lh~Aa~---~g~~~~v~~Ll~~~~~~~~~~~~~~d~ 73 (523)
.+.||.|+..|+.+.++.++.. +.+++.. |..|.||||+|+. .|+.+++++|++.|. ++|.+|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga-----~vn~~d~ 205 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-----HLDAKAA 205 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC-----CTTCCCS
T ss_pred HHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC-----CCCccCC
Confidence 3579999999999999999998 5566655 8899999999966 999999999999874 5999999
Q ss_pred CCChHHhHHHHcCCHHHHHHHHhcCccc
Q 041922 74 RGDTALHLAAALGNEAMCHCMASKDREL 101 (523)
Q Consensus 74 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 101 (523)
+|+||||+|+..|+.+++++|+++|+++
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 233 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRALV 233 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCCCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999876
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=2.4e-19 Score=147.82 Aligned_cols=109 Identities=24% Similarity=0.305 Sum_probs=95.8
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhcccccccccccccCCChHHhHHHHcCCHHHHHHHHhcCcccccccCCCCce
Q 041922 32 KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTALHLAAALGNEAMCHCMASKDRELISAADEGLAN 111 (523)
Q Consensus 32 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~l 111 (523)
.+|.+|+||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-----~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------- 68 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGA-----DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV---------- 68 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTC-----CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT----------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----------
Confidence 468899999999999999999999998763 58999999999999999999999999999998765
Q ss_pred eEeccCCcccchhhhhhcCCccCCccCCCCCCCccccCCCCCCCCccCCCCCCCCCccccchhhhHHHHHHHHhhccCCC
Q 041922 112 CSWSSGNLEDKEHHREKRGTYMGLSSNDDHGKSSRDSRPDKDGDTFSVPETPPVLENDQIFQSRNICLESAVAVHNKDGN 191 (523)
Q Consensus 112 ~l~~~~~~~~v~~l~~~~~~~~~l~~~d~~g~tpLh~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (523)
T Consensus 69 -------------------------------------------------------------------------------- 68 (115)
T 2l6b_A 69 -------------------------------------------------------------------------------- 68 (115)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhHHHHHHHHHHhcccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHH
Q 041922 192 ARDETATAAVQELKFMKKKDQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLV 255 (523)
Q Consensus 192 ~~~~~~~~~~~~v~~Ll~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 255 (523)
+.+|..|.||||+|+..|+.+++++|+++ |++++..+..|.+|-
T Consensus 69 -------------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 69 -------------------NARSKDGNTPEHLAKKNGHHEIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp -------------------TCCCTTCCCTTHHHHTTTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred -------------------cccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence 22344688999999999999999999997 999999999999873
No 112
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=2.4e-19 Score=141.78 Aligned_cols=83 Identities=29% Similarity=0.404 Sum_probs=78.2
Q ss_pred CCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCCCCcHh
Q 041922 216 RKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIKGNSAL 295 (523)
Q Consensus 216 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~G~TpL 295 (523)
+|+||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+.+|+.+++++|+++|+ +++.+|.+|+|||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------~~~~~d~~g~t~l 72 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-------DVNAKDKNGRTPL 72 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTTSCCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CCCccCCCCCCHH
Confidence 489999999999999999999997 89999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHhCCCCC
Q 041922 296 HLAAKFGEYGP 306 (523)
Q Consensus 296 H~Aa~~~~~~~ 306 (523)
|+|+..++.++
T Consensus 73 ~~A~~~~~~~~ 83 (93)
T 1n0q_A 73 HLAARNGHLEV 83 (93)
T ss_dssp HHHHHTTCHHH
T ss_pred HHHHHcCCHHH
Confidence 99999998654
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=1.3e-17 Score=136.27 Aligned_cols=88 Identities=19% Similarity=0.233 Sum_probs=80.5
Q ss_pred ccccCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHHHhccccCCccccccccccCC
Q 041922 211 DQQSGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLLLDRKMLGESDLNIFEHVDIK 290 (523)
Q Consensus 211 ~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~in~~d~~ 290 (523)
...+.+|.||||+|+..|+.+++++|++. +++++.+|..|+||||+|+.+|+.+++++|+++|+ +++.+|.+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga-------~~~~~d~~ 89 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA-------DVXAQDKF 89 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCTT
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------CccccccC
Confidence 34577899999999999999999999997 89999999999999999999999999999999999 99999999
Q ss_pred CCcHhHHHHHhCCCCC
Q 041922 291 GNSALHLAAKFGEYGP 306 (523)
Q Consensus 291 G~TpLH~Aa~~~~~~~ 306 (523)
|+||||+|+..++.++
T Consensus 90 g~tpl~~A~~~~~~~~ 105 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDL 105 (110)
T ss_dssp SCCHHHHHHHHTCHHH
T ss_pred CCcHHHHHHHcCCHHH
Confidence 9999999999998554
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=5.8e-17 Score=132.39 Aligned_cols=56 Identities=21% Similarity=0.351 Sum_probs=45.2
Q ss_pred cCCCChHHHHHHHcChHHHHHHHHhhCCCcccccccCCCcHHHHHHHcCchhHHHHH
Q 041922 214 SGRKATPILIAAKMGVTEMVEKILDTIPVAIHDLDSEKKNLVLLAVENRQTGIYKLL 270 (523)
Q Consensus 214 ~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~L 270 (523)
|..|.||||+|+..|+.+++++|++. |++++.+|.+|+||||+|+.+|+.+++++|
T Consensus 54 d~~g~tpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 54 DKNGSTPLHLAARNGHLEVVKLLLEA-GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 44577888888888888888888886 788888888888888888888888888776
No 115
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=34.55 E-value=92 Score=26.52 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHhhhhhh
Q 041922 457 LFTSIAAIMISFCSGHFSV 475 (523)
Q Consensus 457 ~~~s~~~m~~af~~~~~~~ 475 (523)
+.+-+.++++=|.+.+-++
T Consensus 56 ilVYvGAi~VLflFvvMl~ 74 (184)
T 3rko_J 56 IIVYAGAIMVLFVFVVMML 74 (184)
T ss_dssp HHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 3344445555555554443
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=29.77 E-value=37 Score=20.46 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=11.7
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 041922 5 CLSKFAMRGQWDNFVQAY 22 (523)
Q Consensus 5 ~L~~Aa~~g~~~~v~~ll 22 (523)
.++.|+.+||.+.++.|=
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 456677777777766553
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=25.94 E-value=70 Score=30.28 Aligned_cols=21 Identities=5% Similarity=0.124 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhh
Q 041922 455 TSLFTSIAAIMISFCSGHFSV 475 (523)
Q Consensus 455 ~~~~~s~~~m~~af~~~~~~~ 475 (523)
.+..+|++.+..+|++|+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 456778888899999999965
No 118
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=24.31 E-value=54 Score=31.43 Aligned_cols=21 Identities=10% Similarity=0.276 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhh
Q 041922 455 TSLFTSIAAIMISFCSGHFSV 475 (523)
Q Consensus 455 ~~~~~s~~~m~~af~~~~~~~ 475 (523)
.+..+|++.|..+|++|+|-+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 467788888999999999965
Done!