BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041931
(491 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
Length = 481
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/467 (43%), Positives = 296/467 (63%), Gaps = 20/467 (4%)
Query: 27 QPLSPMARMFHEPESNVYIVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEG 86
+PLSPM+ M P N +IV GFK++ N + ++L+ RFSS ++ K +G
Sbjct: 17 EPLSPMSHMLSSP--NFFIVITFGFKTRCNRSAFVDGINNTLINAPRFSSKMEINYKKKG 74
Query: 87 GLKWVPTKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMSMPMWDLHLLNIKT 146
W+P K+ +DDH+IVP+LE I +PD+FVEDYTS+++ + MS P+W+ HLLN+KT
Sbjct: 75 EPVWIPVKLRVDDHIIVPDLEYSNIQNPDQFVEDYTSNIANIPMDMSKPLWEFHLLNMKT 134
Query: 147 SDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPNEVPTIPSVTKKIDSNGHSKGFWPY 206
S AES+A++++HHS+GDG SLMSLLLAC RK+SDP+ + + + TKK S +W +
Sbjct: 135 SKAESLAIVKIHHSIGDGMSLMSLLLACSRKISDPDALVSNTTATKK---PADSMAWWLF 191
Query: 207 L--LFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGCLPRRFVHRSVSLDDVKL 264
+ F + + + T+V+ + T + F+ DTK PL G +G + VHR +S +DVKL
Sbjct: 192 VGFWFMIRVTFTTIVEFSKLMLT-VCFLEDTKNPLMGNPSDGFQSWKVVHRIISFEDVKL 250
Query: 265 VRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLR 324
+++ MN +NDV+LG+TQAGLSRYL+ KY +G + + +R+R +NLR
Sbjct: 251 IKDTMNMKVNDVLLGMTQAGLSRYLSSKY------DGSTAEKKKILEKLRVRGAVAINLR 304
Query: 325 PSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEAS 384
P+ I++LA+M+ KGSK +WGN IG +IFP + DPL+Y+R AK MDRKK SLEA
Sbjct: 305 PATKIEDLADMMAKGSKCRWGNFIGTVIFPLWVKSEKDPLEYIRRAKATMDRKKISLEAF 364
Query: 385 FSYFLSKSFLKFCNKAA------SFPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQ 438
F Y + K LKF A T+L FSNV GP EEIS + +PI+Y+A S
Sbjct: 365 FFYGIIKFTLKFFGGKAVEAFGKRIFGHTSLAFSNVKGPDEEISFFHHPISYIAGSALVG 424
Query: 439 PNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTAS 485
L IH +SY +K+ L+VD I DP++LCDD+ E+L +IK+A+
Sbjct: 425 AQALNIHFISYVDKIVINLAVDTTTIQDPNRLCDDMVEALEIIKSAT 471
>sp|P67211|Y3761_MYCBO Putative diacyglycerol O-acyltransferase Mb3761c OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3761c PE=3
SV=1
Length = 454
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 151/391 (38%), Gaps = 66/391 (16%)
Query: 120 DYTSSLSQTGIKMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVS 179
+ TS L + + P+W+LH++ +D ++HH+L DG S M L
Sbjct: 101 ELTSRLHTSLLDRHRPLWELHVVE-GLNDGRFAMYTKMHHALIDGVSAMKLAQRTLSADP 159
Query: 180 DPNEVPTIPSVTKKIDSNGHSKGFWPY-LLFKLWLFWNTLVDVVMFIATALMFVRDTKTP 238
D EV I ++ + + S G LFK+ L + +A A + + P
Sbjct: 160 DDAEVRAIWNLPPRPRTRPPSDGSSLLDALFKMAGSVVGLAPSTLKLARAALLEQQLTLP 219
Query: 239 LKG-------ELGNGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNR 291
++G RR +S SLD +K V+ A T+ND +L + L YL
Sbjct: 220 FAAPHSMFNVKVGGA---RRCAAQSWSLDRIKSVKQAAGVTVNDAVLAMCAGALRYYLIE 276
Query: 292 KYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYI 351
+ N LP+ RP + ++ K+ + A GN +G +
Sbjct: 277 R--------------NALPD------------RPLIAMVPVSLRSKEDADAG-GNLVGSV 309
Query: 352 IFPFTIALRDDPLDYLREAKVAMDRKKASL-EASFSYFLSKSFLKFC--------NKAAS 402
+ + DDP ++ +MD K L E L+ S L ++
Sbjct: 310 LCNLATHV-DDPAQRIQTISASMDGNKKVLSELPQLQVLALSALNMAPLTLAGVPGFLSA 368
Query: 403 FPSETTLWFSNVMGPQEEISLYG-------YPIAYVAPSCCGQPNG--LMIHVVSYANKM 453
P + SNV GP + + YG YP++ + P+G L I +V+ A +
Sbjct: 369 VPPPFNIVISNVPGPVDPL-YYGTARLDGSYPLSNI-------PDGQALNITLVNNAGNL 420
Query: 454 TFVLSVDDGLIPDPHKLCDDLEESLHLIKTA 484
F L +P +L LE SL ++ A
Sbjct: 421 DFGLVGCRRSVPHLQRLLAHLESSLKDLEQA 451
>sp|P67210|TGS2_MYCTU Probable diacyglycerol O-acyltransferase tgs2 OS=Mycobacterium
tuberculosis GN=tgs2 PE=1 SV=1
Length = 454
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 151/391 (38%), Gaps = 66/391 (16%)
Query: 120 DYTSSLSQTGIKMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVS 179
+ TS L + + P+W+LH++ +D ++HH+L DG S M L
Sbjct: 101 ELTSRLHTSLLDRHRPLWELHVVE-GLNDGRFAMYTKMHHALIDGVSAMKLAQRTLSADP 159
Query: 180 DPNEVPTIPSVTKKIDSNGHSKGFWPY-LLFKLWLFWNTLVDVVMFIATALMFVRDTKTP 238
D EV I ++ + + S G LFK+ L + +A A + + P
Sbjct: 160 DDAEVRAIWNLPPRPRTRPPSDGSSLLDALFKMAGSVVGLAPSTLKLARAALLEQQLTLP 219
Query: 239 LKG-------ELGNGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNR 291
++G RR +S SLD +K V+ A T+ND +L + L YL
Sbjct: 220 FAAPHSMFNVKVGGA---RRCAAQSWSLDRIKSVKQAAGVTVNDAVLAMCAGALRYYLIE 276
Query: 292 KYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYI 351
+ N LP+ RP + ++ K+ + A GN +G +
Sbjct: 277 R--------------NALPD------------RPLIAMVPVSLRSKEDADAG-GNLVGSV 309
Query: 352 IFPFTIALRDDPLDYLREAKVAMDRKKASL-EASFSYFLSKSFLKFC--------NKAAS 402
+ + DDP ++ +MD K L E L+ S L ++
Sbjct: 310 LCNLATHV-DDPAQRIQTISASMDGNKKVLSELPQLQVLALSALNMAPLTLAGVPGFLSA 368
Query: 403 FPSETTLWFSNVMGPQEEISLYG-------YPIAYVAPSCCGQPNG--LMIHVVSYANKM 453
P + SNV GP + + YG YP++ + P+G L I +V+ A +
Sbjct: 369 VPPPFNIVISNVPGPVDPL-YYGTARLDGSYPLSNI-------PDGQALNITLVNNAGNL 420
Query: 454 TFVLSVDDGLIPDPHKLCDDLEESLHLIKTA 484
F L +P +L LE SL ++ A
Sbjct: 421 DFGLVGCRRSVPHLQRLLAHLESSLKDLEQA 451
>sp|P67205|Y919_MYCBO Putative diacyglycerol O-acyltransferase Mb0919 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0919 PE=3
SV=1
Length = 505
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 93/238 (39%), Gaps = 38/238 (15%)
Query: 71 HRRFSSLQVVDEKIEGGLKWVPTKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGI 130
HR +SL + E T+V+LD HV + L P+ + + S L +
Sbjct: 90 HRSLTSLGQWSWRTE-------TEVDLDYHVRLSALPPR---AGTAELWALVSELHAGML 139
Query: 131 KMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPN-------- 182
S P+W + L+ ++VHH+L DG S+M LL +DP+
Sbjct: 140 DRSRPLWQVDLIE-GLPGGRCAVYVKVHHALADGVSVMRLLQRIV--TADPHQRQMPTLW 196
Query: 183 EVPTIPSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLV-DVVMFIA----------TALMF 231
EVP SV K G S+ P L K L V +V +A + +
Sbjct: 197 EVPAQASVAKHTAPRGSSR---PLTLAKGVLGQARGVPGMVRVVADTTWRAAQCRSGPLT 253
Query: 232 VRDTKTPLKGELGNGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYL 289
+ TPL + R S ++ ++ V + TINDV+L + L YL
Sbjct: 254 LAAPHTPLNEPIAGA---RSVAGCSFPIERLRQVAEHADATINDVVLAMCGGALRAYL 308
>sp|P67204|Y895_MYCTU Putative diacyglycerol O-acyltransferase Rv0895/MT0919
OS=Mycobacterium tuberculosis GN=Rv0895 PE=2 SV=1
Length = 505
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 93/238 (39%), Gaps = 38/238 (15%)
Query: 71 HRRFSSLQVVDEKIEGGLKWVPTKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGI 130
HR +SL + E T+V+LD HV + L P+ + + S L +
Sbjct: 90 HRSLTSLGQWSWRTE-------TEVDLDYHVRLSALPPR---AGTAELWALVSELHAGML 139
Query: 131 KMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPN-------- 182
S P+W + L+ ++VHH+L DG S+M LL +DP+
Sbjct: 140 DRSRPLWQVDLIE-GLPGGRCAVYVKVHHALADGVSVMRLLQRIV--TADPHQRQMPTLW 196
Query: 183 EVPTIPSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLV-DVVMFIA----------TALMF 231
EVP SV K G S+ P L K L V +V +A + +
Sbjct: 197 EVPAQASVAKHTAPRGSSR---PLTLAKGVLGQARGVPGMVRVVADTTWRAAQCRSGPLT 253
Query: 232 VRDTKTPLKGELGNGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYL 289
+ TPL + R S ++ ++ V + TINDV+L + L YL
Sbjct: 254 LAAPHTPLNEPIAGA---RSVAGCSFPIERLRQVAEHADATINDVVLAMCGGALRAYL 308
>sp|O06343|Y3480_MYCTU Putative diacyglycerol O-acyltransferase Rv3480c/MT3584
OS=Mycobacterium tuberculosis GN=Rv3480c PE=2 SV=1
Length = 497
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 87/227 (38%), Gaps = 58/227 (25%)
Query: 250 RRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNL 309
RRF + LD +K + + TINDV L + GL R+L+ L E L
Sbjct: 271 RRFATQQYPLDRLKAIGAQYDATINDVALAIIGGGLRRFLDE----------LGE----L 316
Query: 310 PNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYL-- 367
PN L +N+RP GN + I+ + DP+ L
Sbjct: 317 PNK-SLIVVLPVNVRPK-------------DDEGGGNAVATILATLGTDVA-DPVQRLAA 361
Query: 368 -----REAKV---AMDRK-----KASLEASFSYFLSKSFLKFCNKAASFPSETTLWFSNV 414
R AK +MD+ A+L A + L+ + +P L SNV
Sbjct: 362 VTASTRAAKAQLRSMDKDAILAYSAALMAPYGVQLAST---LSGVKPPWPYTFNLCVSNV 418
Query: 415 MGPQEEISLYG------YPIAYVAPSCCGQPNGLMIHVVSYANKMTF 455
GP++ + L G YP++ VA S L + + SYA + F
Sbjct: 419 PGPEDVLYLRGSRMEASYPVSLVAHS-----QALNVTLQSYAGTLNF 460
>sp|O06795|Y1760_MYCTU Putative diacyglycerol O-acyltransferase Rv1760/MT1809
OS=Mycobacterium tuberculosis GN=Rv1760 PE=2 SV=1
Length = 502
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 135 PMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSD-PNEVP---TIPSV 190
P+W++ ++ +L+VHH++ DG + +LL C D P P T
Sbjct: 150 PLWEMWVIEGGARSDTVAVMLKVHHAVVDGVAGANLLSHLCSLQPDAPAPQPVRGTGGGN 209
Query: 191 TKKIDSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKT----------PLK 240
+I ++G +GF + + V+ + L+ R+ +T P
Sbjct: 210 VLQIAASG-LEGF----ASRPVRLATVVPATVLTLVRTLLRAREGRTMAAPFSAPPTPFN 264
Query: 241 GELGNGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYL 289
G LG R + + + DVK V++ TINDV++ + L R+L
Sbjct: 265 GPLGR---LRNIAYTQLDMRDVKRVKDRFGVTINDVVVALCAGALRRFL 310
>sp|P0A651|Y3154_MYCBO Putative diacyglycerol O-acyltransferase Mb3154c OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3154c PE=3
SV=1
Length = 463
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 136/368 (36%), Gaps = 65/368 (17%)
Query: 135 PMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPNEVPTIPSVTKKI 194
P+W++ ++ +D++ + ++HH + DG + LL + + I + +
Sbjct: 114 PLWEVWVIE-GLADSKWAILTKLHHCMADGIAATHLLAGLSDESMSDSFASNIHTTMQSQ 172
Query: 195 DSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGCLP--RRF 252
++ GF L + +V A +P L NG + RR+
Sbjct: 173 SASVRRGGFRVNPSEALTASTAVMAGIVRAAKGASEIAAGVLSPAASSL-NGPISDLRRY 231
Query: 253 VHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNN 312
V L DV+ V + TINDV L + Y + I G R ++
Sbjct: 232 SAAKVPLADVEQVCRKFDVTINDVALAA--------ITESYRNVLIQRGERPRFDS---- 279
Query: 313 IRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKV 372
LR ++ R ++ + + N + ++ P +++PL LR
Sbjct: 280 --LRTLVPVSTRSNSALSKTDNRVS-------------LMLPNLPVDQENPLQRLRIVHS 324
Query: 373 AMDRKKASLEASFSYFLSKSFLKFCNKAASFPSETTLW----------------FSNVMG 416
+ R KA + F + + N+ P T W +NV G
Sbjct: 325 RLTRAKAGGQRQF----GNTLMAIANR---LPFPMTAWAVGLLMRLPQRGVVTVATNVPG 377
Query: 417 PQEEISLYG------YPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKL 470
P+ + + G YP++ +A + ++SYA+ + F + D ++ D +L
Sbjct: 378 PRRPLQIMGRRVLDLYPVSPIAMQLRTS-----VAMLSYADDLYFGILADYDVVADAGQL 432
Query: 471 CDDLEESL 478
+E+++
Sbjct: 433 ARGIEDAV 440
>sp|P0A650|TGS1_MYCTU Probable diacyglycerol O-acyltransferase tgs1 OS=Mycobacterium
tuberculosis GN=tgs1 PE=1 SV=1
Length = 463
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 136/368 (36%), Gaps = 65/368 (17%)
Query: 135 PMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPNEVPTIPSVTKKI 194
P+W++ ++ +D++ + ++HH + DG + LL + + I + +
Sbjct: 114 PLWEVWVIE-GLADSKWAILTKLHHCMADGIAATHLLAGLSDESMSDSFASNIHTTMQSQ 172
Query: 195 DSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGCLP--RRF 252
++ GF L + +V A +P L NG + RR+
Sbjct: 173 SASVRRGGFRVNPSEALTASTAVMAGIVRAAKGASEIAAGVLSPAASSL-NGPISDLRRY 231
Query: 253 VHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNN 312
V L DV+ V + TINDV L + Y + I G R ++
Sbjct: 232 SAAKVPLADVEQVCRKFDVTINDVALAA--------ITESYRNVLIQRGERPRFDS---- 279
Query: 313 IRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKV 372
LR ++ R ++ + + N + ++ P +++PL LR
Sbjct: 280 --LRTLVPVSTRSNSALSKTDNRVS-------------LMLPNLPVDQENPLQRLRIVHS 324
Query: 373 AMDRKKASLEASFSYFLSKSFLKFCNKAASFPSETTLW----------------FSNVMG 416
+ R KA + F + + N+ P T W +NV G
Sbjct: 325 RLTRAKAGGQRQF----GNTLMAIANR---LPFPMTAWAVGLLMRLPQRGVVTVATNVPG 377
Query: 417 PQEEISLYG------YPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKL 470
P+ + + G YP++ +A + ++SYA+ + F + D ++ D +L
Sbjct: 378 PRRPLQIMGRRVLDLYPVSPIAMQLRTS-----VAMLSYADDLYFGILADYDVVADAGQL 432
Query: 471 CDDLEESL 478
+E+++
Sbjct: 433 ARGIEDAV 440
>sp|Q8GGG1|WSD_ACIAD O-acyltransferase WSD OS=Acinetobacter sp. (strain ADP1)
GN=wax-dgaT PE=1 SV=1
Length = 458
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 88/244 (36%), Gaps = 43/244 (17%)
Query: 250 RRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNL 309
RRF +S LD + + ++N TINDV+L V L YL
Sbjct: 234 RRFAAQSFDLDRFRNIAKSLNVTINDVVLAVCSGALRAYL-------------------- 273
Query: 310 PNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLRE 369
N PS + + + + N+I I+ +DDPL L
Sbjct: 274 ---------MSHNSLPSKPLIAMVPASIRNDDSDVSNRITMILANLATH-KDDPLQRLEI 323
Query: 370 AKVAMDRKKASLEASFS-YFLSKSFLKFCNKAASFPSET-------TLWFSNVMGPQEEI 421
+ ++ K + S L+ S + + + S L SNV GP+E +
Sbjct: 324 IRRSVQNSKQRFKRMTSDQILNYSAVVYGPAGLNIISGMMPKRQAFNLVISNVPGPREPL 383
Query: 422 SLYGYPIAYVAPSCC---GQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESL 478
G + + P+ GQ L I + SY +K+ L +P L LEE +
Sbjct: 384 YWNGAKLDALYPASIVLDGQ--ALNITMTSYLDKLEVGLIACRNALPRMQNLLTHLEEEI 441
Query: 479 HLIK 482
L +
Sbjct: 442 QLFE 445
>sp|O53304|Y3087_MYCTU Putative diacyglycerol O-acyltransferase Rv3087/MT3172
OS=Mycobacterium tuberculosis GN=Rv3087 PE=1 SV=1
Length = 472
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 250 RRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNR 291
RRF S L +V+ V + TINDV L + RYL R
Sbjct: 241 RRFSCESFPLAEVREVSKTLGVTINDVFLACVAGAVRRYLER 282
>sp|P25852|ZRAR_SALTY Transcriptional regulatory protein ZraR OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=zraR PE=1 SV=2
Length = 441
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 74 FSSLQVVDEKIEGG-LKWVPTKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKM 132
FSS++ E ++ G L ++ ++ D + LE L + + E ++S +Q G+
Sbjct: 86 FSSVETAVEALKAGALDYLIKPLDFDR--LQETLEKALAHTRETGAELPSASAAQFGMIG 143
Query: 133 SMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSD 180
S P HLLN A S A + +H G G L++ L C SD
Sbjct: 144 SSPAMQ-HLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSD 190
>sp|Q8Z333|ZRAR_SALTI Transcriptional regulatory protein ZraR OS=Salmonella typhi GN=zraR
PE=3 SV=1
Length = 441
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 74 FSSLQVVDEKIEGG-LKWVPTKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKM 132
FSS++ E ++ G L ++ ++ D + LE L + + E ++S +Q G+
Sbjct: 86 FSSVETAVEALKAGALDYLIKPLDFDR--LQETLEKALAHTRETGAELPSASAAQFGMIG 143
Query: 133 SMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSD 180
S P HLLN A S A + +H G G L++ L C SD
Sbjct: 144 SSPAMQ-HLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSD 190
>sp|Q1GNH1|FOLD_SPHAL Bifunctional protein FolD OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=folD PE=3 SV=1
Length = 302
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 38 EPESNVYIVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVV------DEKIEGGLKWV 91
+P S VY+ G K K A+ EH L ++ + DE ++G L +
Sbjct: 49 DPASAVYV----GSKGKATVAAGMASFEHRLAATATQDEVEALLRQLNADEAVDGILLQL 104
Query: 92 PTKVNLDDHVIVPNLEPKLIDSPDKFVEDYTS------SLSQTGIKMSMPMWDLHLLNIK 145
P +LD+ V ++ PDK V+ T +L G+ P L LL +
Sbjct: 105 PLPGHLDEQAAVATID------PDKDVDGLTPVSAGRLALGIPGMVPCTPYGCLLLLQDR 158
Query: 146 TSDAESVAVLRVHHSLGDGTSLMSLLL-ACCRKVSDPNEVPTIPSVTKKID 195
D + + S+ G + LLL A C + +P++ ++ D
Sbjct: 159 LGDLSGKDAIVIGRSILVGKPMGQLLLGANCTVTMAHSRTKDLPALVRRAD 209
>sp|A6VUQ2|RLMD_MARMS 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Marinomonas
sp. (strain MWYL1) GN=rlmD PE=3 SV=1
Length = 440
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 322 NLRPSAGIQELANMLKKGSKAKW--GNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKA 379
NL Q LAN + +KA W G I L D P Y R A++A+D KK
Sbjct: 90 NLCGGCSFQHLANEQQLSAKADWLQGQLRNLITTQELETLSDTPTGYRRRARLAIDIKKG 149
Query: 380 SLEASFSYFLSKSFL 394
+ F SK +
Sbjct: 150 RMVLGFRGKASKEII 164
>sp|P0C6X9|R1AB_CVMA5 Replicase polyprotein 1ab OS=Murine coronavirus (strain A59) GN=rep
PE=1 SV=1
Length = 7176
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 114 PDKFVEDYTSSLSQTGIKMSMPMWDLH---LLNIKTSDAESVA--VLRVHHSLGDGTSL- 167
P VE + + TG+ +S M+DL+ LLN+ D +S+ V H+SL +G L
Sbjct: 2641 PMLMVEKKLITTANTGLSVSRTMFDLYVDSLLNVLDVDRKSLTSFVNAAHNSLKEGVQLE 2700
Query: 168 --MSLLLACCRKVSDPNEVPTIPSVTKKIDS 196
M + C R+ + S+TK + S
Sbjct: 2701 QVMDTFIGCARRKCAIDSDVETKSITKSVMS 2731
>sp|P0C6V0|R1A_CVMA5 Replicase polyprotein 1a OS=Murine coronavirus (strain A59) GN=1a
PE=1 SV=1
Length = 4468
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 114 PDKFVEDYTSSLSQTGIKMSMPMWDLH---LLNIKTSDAESVA--VLRVHHSLGDGTSL- 167
P VE + + TG+ +S M+DL+ LLN+ D +S+ V H+SL +G L
Sbjct: 2641 PMLMVEKKLITTANTGLSVSRTMFDLYVDSLLNVLDVDRKSLTSFVNAAHNSLKEGVQLE 2700
Query: 168 --MSLLLACCRKVSDPNEVPTIPSVTKKIDS 196
M + C R+ + S+TK + S
Sbjct: 2701 QVMDTFIGCARRKCAIDSDVETKSITKSVMS 2731
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,256,447
Number of Sequences: 539616
Number of extensions: 7306277
Number of successful extensions: 15964
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 15943
Number of HSP's gapped (non-prelim): 29
length of query: 491
length of database: 191,569,459
effective HSP length: 122
effective length of query: 369
effective length of database: 125,736,307
effective search space: 46396697283
effective search space used: 46396697283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)