Query 041931
Match_columns 491
No_of_seqs 145 out of 1230
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 12:12:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041931.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041931hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02946 acyl_WS_DGAT acyltra 100.0 3.1E-51 6.7E-56 429.2 44.5 416 29-485 1-446 (446)
2 PF03007 WES_acyltransf: Wax e 100.0 3.4E-36 7.3E-41 292.1 24.3 242 29-277 1-263 (263)
3 PF06974 DUF1298: Protein of u 99.9 2.9E-26 6.2E-31 203.9 18.4 145 340-484 3-153 (153)
4 COG4908 Uncharacterized protei 99.9 2.1E-22 4.5E-27 196.0 30.0 379 47-482 29-437 (439)
5 PF07247 AATase: Alcohol acety 99.9 2.2E-21 4.7E-26 205.4 33.5 411 28-468 1-467 (480)
6 PRK09294 acyltransferase PapA5 99.9 5E-20 1.1E-24 191.4 28.2 391 25-484 6-411 (416)
7 PRK12467 peptide synthase; Pro 99.9 2E-19 4.3E-24 228.7 33.3 400 25-483 48-478 (3956)
8 PRK12467 peptide synthase; Pro 99.8 6.8E-19 1.5E-23 223.9 34.0 399 24-483 1114-1539(3956)
9 PRK12316 peptide synthase; Pro 99.8 4E-18 8.6E-23 220.5 31.6 397 25-483 2601-3022(5163)
10 PRK12316 peptide synthase; Pro 99.8 9.6E-18 2.1E-22 217.0 32.7 401 24-483 47-476 (5163)
11 PF00668 Condensation: Condens 99.8 4.2E-18 9E-23 167.9 21.4 274 25-357 3-300 (301)
12 PRK10252 entF enterobactin syn 99.8 7.6E-17 1.6E-21 190.3 35.1 392 24-483 5-425 (1296)
13 PRK05691 peptide synthase; Val 99.8 3.6E-17 7.9E-22 209.9 32.2 400 24-483 1726-2153(4334)
14 PRK05691 peptide synthase; Val 99.7 5.1E-16 1.1E-20 199.5 33.1 396 25-483 674-1098(4334)
15 PLN02481 Omega-hydroxypalmitat 98.4 6.7E-05 1.4E-09 78.6 22.0 268 25-358 31-323 (436)
16 PLN02663 hydroxycinnamoyl-CoA: 98.3 0.00013 2.9E-09 76.2 23.6 140 25-177 20-171 (431)
17 PF02458 Transferase: Transfer 98.2 3.6E-05 7.8E-10 80.5 14.7 268 26-358 21-312 (432)
18 PLN03157 spermidine hydroxycin 98.1 0.00056 1.2E-08 71.9 21.3 137 25-177 20-172 (447)
19 PLN00140 alcohol acetyltransfe 97.8 0.0035 7.6E-08 65.8 21.3 263 27-357 24-307 (444)
20 COG1020 EntF Non-ribosomal pep 96.1 0.22 4.7E-06 54.8 17.0 97 260-386 7-103 (642)
21 TIGR03443 alpha_am_amid L-amin 95.9 0.14 3.1E-06 61.6 15.6 158 267-482 42-201 (1389)
22 PF07428 Tri3: 15-O-acetyltran 94.6 1.5 3.2E-05 43.4 14.8 305 38-386 39-393 (413)
23 PF00198 2-oxoacid_dh: 2-oxoac 91.8 9 0.0002 36.4 15.4 172 252-482 31-223 (231)
24 PRK11856 branched-chain alpha- 90.5 12 0.00026 38.8 16.3 39 252-290 215-258 (411)
25 PLN02528 2-oxoisovalerate dehy 86.5 32 0.00069 35.8 16.1 40 251-290 210-258 (416)
26 TIGR01349 PDHac_trf_mito pyruv 84.4 41 0.00089 35.2 15.7 38 253-290 235-280 (435)
27 TIGR02927 SucB_Actino 2-oxoglu 83.8 28 0.0006 38.0 14.7 38 253-290 381-428 (590)
28 PRK11857 dihydrolipoamide acet 81.3 60 0.0013 32.2 14.9 22 270-291 131-152 (306)
29 PRK14843 dihydrolipoamide acet 78.8 78 0.0017 32.1 15.3 20 270-289 173-192 (347)
30 PRK05704 dihydrolipoamide succ 77.9 92 0.002 32.3 16.7 38 253-290 206-253 (407)
31 PF00302 CAT: Chloramphenicol 75.3 1.9 4E-05 40.3 2.1 23 152-174 183-205 (206)
32 PLN02226 2-oxoglutarate dehydr 75.0 81 0.0017 33.2 14.1 39 252-290 261-309 (463)
33 PTZ00144 dihydrolipoamide succ 73.5 1.2E+02 0.0026 31.6 15.2 39 253-291 217-265 (418)
34 COG4845 Chloramphenicol O-acet 72.8 3.4 7.4E-05 37.8 3.0 28 153-180 186-213 (219)
35 PF13745 HxxPF_rpt: HxxPF-repe 71.3 27 0.00058 27.1 7.8 65 403-470 24-88 (91)
36 TIGR01348 PDHac_trf_long pyruv 70.6 1.3E+02 0.0028 32.6 14.9 21 270-290 372-392 (546)
37 PRK13757 chloramphenicol acety 69.6 3.2 6.9E-05 39.1 2.2 25 152-176 186-210 (219)
38 TIGR01347 sucB 2-oxoglutarate 69.4 1.5E+02 0.0032 30.8 15.0 21 270-290 229-249 (403)
39 PRK11854 aceF pyruvate dehydro 67.4 2E+02 0.0044 31.7 16.0 37 254-290 432-479 (633)
40 PLN02744 dihydrolipoyllysine-r 67.3 1.9E+02 0.004 31.3 17.4 38 253-290 337-384 (539)
41 PRK11855 dihydrolipoamide acet 56.8 2.9E+02 0.0062 29.9 16.2 37 254-290 348-393 (547)
42 PRK12270 kgd alpha-ketoglutara 54.6 3.7E+02 0.0081 31.3 14.7 106 270-417 169-276 (1228)
43 PF01402 RHH_1: Ribbon-helix-h 50.6 38 0.00083 21.8 4.2 31 255-285 7-37 (39)
44 PF03869 Arc: Arc-like DNA bin 47.4 37 0.0008 23.7 3.9 32 255-286 12-43 (50)
45 PF05534 HicB: HicB family; I 36.6 30 0.00065 24.3 2.1 22 259-280 29-50 (51)
46 PF13443 HTH_26: Cro/C1-type H 34.0 22 0.00047 25.7 1.1 23 255-277 36-58 (63)
47 PHA01513 mnt Mnt 33.0 53 0.0012 25.6 3.1 30 257-286 15-44 (82)
48 smart00803 TAF TATA box bindin 32.5 1E+02 0.0022 22.8 4.5 35 257-291 3-38 (65)
49 PRK11856 branched-chain alpha- 29.5 28 0.0006 36.2 1.4 30 152-181 376-405 (411)
50 PF12651 RHH_3: Ribbon-helix-h 28.3 1E+02 0.0022 20.9 3.5 33 256-288 11-43 (44)
51 KOG0557 Dihydrolipoamide acety 27.8 4.4E+02 0.0095 27.7 9.5 36 252-287 269-311 (470)
52 PRK03762 hypothetical protein; 26.6 2.1E+02 0.0046 23.4 5.8 38 449-486 47-84 (103)
53 COG3655 Predicted transcriptio 23.3 54 0.0012 25.0 1.6 23 255-277 41-63 (73)
54 PRK11855 dihydrolipoamide acet 20.9 47 0.001 35.9 1.3 30 152-181 513-542 (547)
55 PRK14623 hypothetical protein; 20.7 2.8E+02 0.006 22.9 5.4 37 450-486 44-80 (106)
56 PRK14628 hypothetical protein; 20.6 3.1E+02 0.0067 23.0 5.8 37 450-486 62-98 (118)
57 PF14483 Cut8_M: Cut8 dimerisa 20.5 42 0.00092 22.0 0.5 27 54-80 9-35 (38)
58 COG5435 Uncharacterized conser 20.4 2.4E+02 0.0052 24.7 5.1 48 437-484 17-64 (147)
No 1
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=100.00 E-value=3.1e-51 Score=429.17 Aligned_cols=416 Identities=28% Similarity=0.353 Sum_probs=314.1
Q ss_pred CChhhhhcc--CCCCceE-EEEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCCCcceeee
Q 041931 29 LSPMARMFH--EPESNVY-IVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNLDDHVIVP 104 (491)
Q Consensus 29 Ls~~d~~~~--~~~~~v~-~~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~~~hv~~~ 104 (491)
|||.|++|+ +.+.+.+ +...+.++|++|.+.|++++.+.+.+||.||+++.+.....+.++|+. ++++++.|+...
T Consensus 1 ls~~D~~~l~~e~~~~~~~~~~~~~l~g~ld~~~l~~al~~~~~rh~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (446)
T TIGR02946 1 LSPVDAAFLRLETPTRPMHIGALAVFEGPLSFEALRALLESRLPLAPRFRQRLREVPLGLGHPYWVEDPDFDLDYHVRRV 80 (446)
T ss_pred CCHHHHHHHhccCCCCCceEEEEEEEcCCccHHHHHHHHHHhhccCChhhcccccCCCCCCCcEEeeCCCCChHHhhccc
Confidence 688999887 3443333 346678899999999999999999999999999987533356789987 888999888765
Q ss_pred cCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcccCCCCCCC
Q 041931 105 NLEPKLIDSPDKFVEDYTSSLSQTGIKMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPNEV 184 (491)
Q Consensus 105 ~l~~~~~~~~~~~l~~~i~~~~~~p~d~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p~~~ 184 (491)
+++..+ .++++++++++..++|||.++|+|+++++++.. ++++++++++||+++||+|+..++.++++.+.++...
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~p~dl~~Pl~r~~li~~~~-~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~~~~~~ 156 (446)
T TIGR02946 81 ALPAPG---TRRELLELVGRLMSTPLDRSRPLWEMHLIEGLA-GGRFAVLTKVHHALADGVAGLRLLARLLDDDPDPPPL 156 (446)
T ss_pred cCCCCC---CHHHHHHHHHHHhcCCCCCCCCCeEEEEEeccC-CCeEEEEEEeehhhhchHHHHHHHHHHcCCCCCCCCC
Confidence 554333 678899999999999999999999999999654 5789999999999999999999999999876433222
Q ss_pred CCCCCCCCCCCCCCCCCCchHH------------HHHHHHHHHHHHHHHHHHH----HHhccccCCCCCCccCCCCCCCC
Q 041931 185 PTIPSVTKKIDSNGHSKGFWPY------------LLFKLWLFWNTLVDVVMFI----ATALMFVRDTKTPLKGELGNGCL 248 (491)
Q Consensus 185 ~~~p~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 248 (491)
+.. .+..+.. ...+..+ .+.......+.+....... ...+ +...|+++++++.+.
T Consensus 157 ~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 227 (446)
T TIGR02946 157 PAP-PPPPQPS----TRGLLSGALSGLPSALLRRVASTAPGVVRAAGRAVEGVARSARPAL-PFTAPPTPLNGPISR--- 227 (446)
T ss_pred CCC-CCCCCCc----hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccC-CCCCCCCcCCCCCCc---
Confidence 111 0110000 0111111 0000000000011110000 0011 223566777777765
Q ss_pred CeEEEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecCCCC
Q 041931 249 PRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAG 328 (491)
Q Consensus 249 ~r~~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~ 328 (491)
.|.+.+..++++++|++|+++|+|+|||++||++++|++|+.++|+ .+. .+++++||||+|...+
T Consensus 228 ~r~~~~~~~~~~~l~~~a~~~g~T~ndvllaa~~~al~~~~~~~~~--------------~~~-~~i~~~~pv~~R~~~~ 292 (446)
T TIGR02946 228 KRRFAAQSLPLADVKAVAKAFGVTINDVVLAAVAGALRRYLEERGE--------------LPD-DPLVAMVPVSLRPMED 292 (446)
T ss_pred cceEEeeccCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHcCC--------------CCC-CceEEEEeeecccccc
Confidence 7788899999999999999999999999999999999999988764 244 3799999999998643
Q ss_pred hhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHH---HHHHHHhH-hhcC--
Q 041931 329 IQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLS---KSFLKFCN-KAAS-- 402 (491)
Q Consensus 329 ~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~---~~l~~~~~-~~~~-- 402 (491)
...+||+++.+.+.||.+ .+||.++|++|+++|+..|++......+... .++|..+. .+.+
T Consensus 293 ------------~~~~~N~~~~~~~~l~~~-~~~~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~ 359 (446)
T TIGR02946 293 ------------DSEGGNQVSAVLVPLPTG-IADPVERLSAIHASMTRAKESGQAMGANALLALSGLLPAPLLRLALRAL 359 (446)
T ss_pred ------------CCCCCCEEEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHhHhhcCHHHHHHHHHhccHHHHHHHHHHh
Confidence 247999999999999997 7789999999999999999998776443322 22222221 1111
Q ss_pred ---CCCcceEEEeccCCCccceEEcCceeeEeecc-ccCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHH
Q 041931 403 ---FPSETTLWFSNVMGPQEEISLYGYPIAYVAPS-CCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESL 478 (491)
Q Consensus 403 ---~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~-~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l 478 (491)
.....++++||+|||..+++++|.++.+++++ |...+.+++++++||+|++++++++|++++||++.|.++|+++|
T Consensus 360 ~~~~~~~~~~~~SNvpg~~~~~~~~g~~v~~~~~~~p~~~~~~l~~~~~sy~g~l~~~~~~d~~~~~d~~~l~~~~~~~l 439 (446)
T TIGR02946 360 ARKAQRLFNLVISNVPGPREPLYLAGAKLDELYPLSPLLDGQGLNITVTSYNGQLDFGLLADRDAVPDPQELADALEAAL 439 (446)
T ss_pred hccCCCceeEEEeCCCCCCcccEecCeeEEEeeccccccCCCeEEEEEEecCCeEEEEEeechhhCCCHHHHHHHHHHHH
Confidence 11235899999999999999999999999997 56788999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 041931 479 HLIKTAS 485 (491)
Q Consensus 479 ~~l~~~a 485 (491)
++|.++|
T Consensus 440 ~~l~~~~ 446 (446)
T TIGR02946 440 EELEAAA 446 (446)
T ss_pred HHHHhhC
Confidence 9998765
No 2
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=100.00 E-value=3.4e-36 Score=292.13 Aligned_cols=242 Identities=28% Similarity=0.370 Sum_probs=178.7
Q ss_pred CChhhhhcc-----CCCCceEEEEEEEeC--C--CCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCCC
Q 041931 29 LSPMARMFH-----EPESNVYIVTMIGFK--S--KINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNLD 98 (491)
Q Consensus 29 Ls~~d~~~~-----~~~~~v~~~~~~~~~--~--~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~~ 98 (491)
||+.|.+|| ..++|++.+.+++.. + +.+.++|++.+++++..+|+||+|++..++..+.|+|++ ++||++
T Consensus 1 Ls~~Da~fl~~e~~~~pmhv~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~fDl~ 80 (263)
T PF03007_consen 1 LSPLDAAFLYMETPSNPMHVGALAIFDPPTDGAPPLDVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDFDLD 80 (263)
T ss_pred CChHHHHHHhcCCCCCCceEEEEEEEEcCCCCCCcchHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCCChH
Confidence 566777665 255788888888876 2 347999999999999999999999999888889999999 889999
Q ss_pred cceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcccC
Q 041931 99 DHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKV 178 (491)
Q Consensus 99 ~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~~ 178 (491)
+||+...++.++ ++++|++++++++++|||+++||||+|+|+|+. +++++|++|+|||++||.+++.++..+++..
T Consensus 81 ~Hv~~~~l~~pg---~~~~l~~~v~~l~~~pLd~~rPlWe~~li~g~~-~g~~Al~~k~HHal~DG~~~~~l~~~l~~~~ 156 (263)
T PF03007_consen 81 YHVRRVALPAPG---DRAELQALVSRLASTPLDRSRPLWEVHLIEGLE-GGRFALVLKVHHALADGVSLMRLLAALLDRS 156 (263)
T ss_pred HceEEecCCCCC---CHHHHHHHHHHHhcCCCCCCCCCcEEEEEecCC-CCcEEEEEeehhhhhhhHhHHHHHHHHhCCC
Confidence 999998988777 899999999999999999999999999999975 6889999999999999999999999999865
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCc----hHHHHH---HHHHHHHHHHHHHHHHH---HhccccCCCCCCccCCCCCCC
Q 041931 179 SDPNEVPTIPSVTKKI-DSNGHSKGF----WPYLLF---KLWLFWNTLVDVVMFIA---TALMFVRDTKTPLKGELGNGC 247 (491)
Q Consensus 179 ~~p~~~~~~p~~~~~~-~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (491)
.++...+..+....+. .......|. ...+.. .+......+........ ........|++++|+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~n~~~~~-- 234 (263)
T PF03007_consen 157 PDPPPPPPPPRPPPPAPRTRPRASGLLRRAAAALGRALRAVRGAARDAGRLLRAAASARDLPLPFAAPPTPFNGPISR-- 234 (263)
T ss_pred CCCCCCCCCcccCcCccchhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcccCCCCCC--
Confidence 4433332222111111 000111121 111111 11111211111111110 0111234678899988887
Q ss_pred CCeEEEEeeechHHHHHHHHHcCCcchhHH
Q 041931 248 LPRRFVHRSVSLDDVKLVRNAMNTTINDVM 277 (491)
Q Consensus 248 ~~r~~~~~~~~l~~vk~ia~~~g~TvNdvl 277 (491)
.|++++..+++++||+|++++|+|||||+
T Consensus 235 -~R~~~~~~~~l~~vk~i~~~~g~TvNDVv 263 (263)
T PF03007_consen 235 -RRRFATASLPLDDVKAIAKALGATVNDVV 263 (263)
T ss_pred -CeEEEEEEecHHHHHHHHHHhCCChhhcC
Confidence 88999999999999999999999999985
No 3
>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=99.94 E-value=2.9e-26 Score=203.90 Aligned_cols=145 Identities=42% Similarity=0.657 Sum_probs=125.5
Q ss_pred CCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHh-----HhhcC-CCCcceEEEec
Q 041931 340 SKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFC-----NKAAS-FPSETTLWFSN 413 (491)
Q Consensus 340 ~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~SN 413 (491)
++..+||+++.+.++||+...+||.+||+++++.|++.|++.++...+.+..+++..+ ..+.. ...+.++++||
T Consensus 3 ~~~~~GN~~~~v~~pL~~~~~~dpl~rl~~~~~~~~~~K~s~~a~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~viSN 82 (153)
T PF06974_consen 3 SKARWGNQFGFVLLPLPTADPADPLERLRAAKRSMDRKKRSLEAMLSYALLALVPPLLGAKAARALSNRLSPKANLVISN 82 (153)
T ss_pred CCCCCcceEEEEEeecCcCCccCHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHhhhhhHHHHHhhccCcceEEEec
Confidence 5678999999999999996457999999999999999999999887776655543333 12222 33567999999
Q ss_pred cCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Q 041931 414 VMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTA 484 (491)
Q Consensus 414 vpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~ 484 (491)
||||+++++|+|++|+.+++++...+.+++|+++||+|+++|++++|++++||++.|+++|+++|+||.+|
T Consensus 83 VPGP~~~l~~~G~~v~~i~~~~~~~~~~L~itv~SY~g~l~~gi~ad~~~vpD~~~l~~~~~~~l~eL~~A 153 (153)
T PF06974_consen 83 VPGPQEPLYFAGARVEYIYPSPLGDGQALNITVFSYAGKLDFGIVADRDAVPDPQRLADCFEEALEELKEA 153 (153)
T ss_pred CCCChhheEECCeeeEEEEeeeecCCcceEEEEEEeCCEEEEEEEEccccCCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999998776778899999999999999999999999999999999999999999764
No 4
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=99.92 E-value=2.1e-22 Score=195.97 Aligned_cols=379 Identities=17% Similarity=0.130 Sum_probs=238.3
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCCCc-ceeeecCCCCCCCCcHHHHHH-HHH
Q 041931 47 TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNLDD-HVIVPNLEPKLIDSPDKFVED-YTS 123 (491)
Q Consensus 47 ~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~~~-hv~~~~l~~~~~~~~~~~l~~-~i~ 123 (491)
.++.+.+.+|.+.|+++|.-.+...|.|.|++.+. ..+++|.+ .++++++ .++... .- +++.+.+ .+.
T Consensus 29 ~vi~f~~~fni~~lkkAl~~svka~piL~c~f~eg---~~~~~Wq~i~d~~v~~~~i~l~~---t~---~~~~~~E~~fs 99 (439)
T COG4908 29 YVITFGDKFNIDRLKKALRYSVKAVPILSCKFSEG---EKRPFWQRILDFEVDQIAIHLEE---TK---TDEPFGEVAFS 99 (439)
T ss_pred EEEEeCCccCHHHHHHHHHHHHHhhhhhhhhhhhc---ccchhHHHHhcccccceeEEEee---ec---ccccchhHHHH
Confidence 56788889999999999999999999999999874 45799998 7777776 222211 11 2223322 336
Q ss_pred HhhcCCCC-CC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcccCC----CCCCCCCCCCCCCCCCCC
Q 041931 124 SLSQTGIK-MS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVS----DPNEVPTIPSVTKKIDSN 197 (491)
Q Consensus 124 ~~~~~p~d-~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~~~----~p~~~~~~p~~~~~~~~~ 197 (491)
++..++++ .. .|...+.+++.. .+..|++.+||+++||+|+.+++..+.+.|. +|+..|.. . ..+.+
T Consensus 100 ~Fi~~k~~~t~~~PqI~v~~~r~~---~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys~L~~~~~~~p~~---~-~~g~k 172 (439)
T COG4908 100 RFIVRKLNITKESPQIKVFVVRQT---VGDTLVINLHHAVCDGRGFLEYLYLLARLYSKLLDNPNYQPNE---E-SKGSK 172 (439)
T ss_pred HHHhcccccccCCCeEEEeeehhc---cCcEEEEEechhhhcchhHHHHHHHHHHHHHhcccCCCCCcch---h-hcccc
Confidence 77777777 44 699999999874 4568999999999999999999888877652 23222111 1 00111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccC----CCCCCccCCCCCCCCCeEEEEeeechHHHHHH---HHHcC
Q 041931 198 GHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVR----DTKTPLKGELGNGCLPRRFVHRSVSLDDVKLV---RNAMN 270 (491)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~~~~~~~l~~vk~i---a~~~g 270 (491)
+. .+ .+....... ..+.+.... .. .+..|+.+. ++...-.+.+-.++.++++.+ |+.+|
T Consensus 173 ~i-~~-v~d~f~~~~--------~~r~~ik~~--~e~n~i~~~fP~~~s--~d~~~m~~~~~~I~~~ef~~ikay~k~~g 238 (439)
T COG4908 173 DI-FG-VRDLFDVLE--------RKRGLIKNL--IERNRITRVFPLGGS--PDGPNMSFEKTTIPSDEFKKIKAYAKVHG 238 (439)
T ss_pred ch-hh-hhhhhhHHH--------HHHHhhhhh--hccCCCCccCCCcCC--CCCCcceEEEEecCHHHHHHHHHhhhhcC
Confidence 10 00 111111111 111111111 11 112233321 122345677788887766654 67899
Q ss_pred CcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecCCCChhHHHHHhhcCCCCCCCceEEE
Q 041931 271 TTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGY 350 (491)
Q Consensus 271 ~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~~~ 350 (491)
.||||++|||++..--.|-..+. +.+..+.+.||||+|+....+ +..++|..+.
T Consensus 239 aTiNDiilaa~~~fr~~y~~~~~----------------k~~~~lsi~~~VDlRkyl~sk----------~~sI~Nls~~ 292 (439)
T COG4908 239 ATINDIILAALLKFRLLYNTTHE----------------KANNYLSIDMPVDLRKYLPSK----------EESISNLSSY 292 (439)
T ss_pred CcHHHHHHHHHHHHHHHHhhhch----------------hhcCeeeeceeeehhhhcccc----------ccceecccee
Confidence 99999999998544434433221 122489999999999987532 3689999999
Q ss_pred EEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHh--------HhhcC-CCCcceEEEeccCCCcc-c
Q 041931 351 IIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFC--------NKAAS-FPSETTLWFSNVMGPQE-E 420 (491)
Q Consensus 351 ~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~--------~~~~~-~~~~~~~~~SNvpgp~~-~ 420 (491)
..+.++.++.+|+...++.|+..|...|.+...+..+++..++|-.+ ++... .+. ....-||++.-.+ .
T Consensus 293 ~~i~I~~dd~~~fe~t~~~vk~~~~~~k~gl~g~~~~yl~~ilp~~fkr~~~~~~kk~~~~~~~-~g~ssTNiG~id~~~ 371 (439)
T COG4908 293 LTIVINVDDVTDFEKTLEKVKGIMNPKKIGLAGLYSFYLLGILPLMFKRKLYLKLKKLVEDRFV-EGKSSTNIGIIDEEV 371 (439)
T ss_pred EEEEEeccccccHHHHHHHHHhhcCccccCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-ccccccccccccccc
Confidence 99999998778999999999999998777776666665555443322 11111 111 1222399986443 3
Q ss_pred eEEcCceee-Eeec-cc--cCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q 041931 421 ISLYGYPIA-YVAP-SC--CGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIK 482 (491)
Q Consensus 421 l~~~G~~v~-~~~~-~~--~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~ 482 (491)
.-|+|.... +.++ .| .++..+++++++.|.++|++++.-..+=-...+++.+.|...|.+..
T Consensus 372 ~~f~g~~~d~~~~~~~p~~~ap~Fpl~~tt~g~~~tLtinf~r~~dk~~~~~~fl~~f~~~l~~~~ 437 (439)
T COG4908 372 PPFGGEAEDTDAFFFGPCKYAPVFPLGVTTYGYKLTLTINFYRTNDKKKITGHFLDLFAKELRETL 437 (439)
T ss_pred CCcCceecccceEEEeecccCccceeEEEEeccceEEEEEEEeecCcchHHHHHHHHHHhHhHHHh
Confidence 455664444 2333 34 56677888888888888888884321111235667777777776653
No 5
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=99.91 E-value=2.2e-21 Score=205.38 Aligned_cols=411 Identities=16% Similarity=0.180 Sum_probs=232.4
Q ss_pred cCChhhhhcc-CCCCceE--EEEEEEeCCCCCHHHHHHHHHHHHhhccCCccceeccc-----------ccCCceEEEe-
Q 041931 28 PLSPMARMFH-EPESNVY--IVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDE-----------KIEGGLKWVP- 92 (491)
Q Consensus 28 ~Ls~~d~~~~-~~~~~v~--~~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~-----------~~~~~p~w~~- 92 (491)
+|++.+++|. ....+.| .....++..+++.+.|..||+..+.+||.|++.+.... ....+|||..
T Consensus 1 ~lg~lE~~~~~r~~~~~y~n~~v~a~y~~~~~~~~l~~AL~~~I~~~P~L~~~i~~~~~~~~~~~~~~~~~~~~P~~~~l 80 (480)
T PF07247_consen 1 RLGFLERYFYARHRLGLYSNFIVTATYNKPLSKNQLYHALRSVILKHPILSVNIFGEDDPEDDAYYNSDNYTVRPYFKRL 80 (480)
T ss_pred CCChhHHHHHHhhhcCCceeEEEEEEECCCCCHHHHHHHHHHHHHhCccEEEEEeccCCcccccccccccceeccccccc
Confidence 4788888887 3333333 22334556789999999999999999999999998641 1134678888
Q ss_pred eecCCCcceeeecCCC-CCCC-CcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHH
Q 041931 93 TKVNLDDHVIVPNLEP-KLID-SPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMS 169 (491)
Q Consensus 93 ~~~d~~~hv~~~~l~~-~~~~-~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~ 169 (491)
+.+|+++||.+..... .... ..++++.+.+.+. .-+++.. +|+||+.+++..+.++...|+|.+||+++||+|++.
T Consensus 81 ~~I~l~dvV~~~~~e~~~~~d~~~~~~l~~~l~~~-~~~~~~~~~P~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~ 159 (480)
T PF07247_consen 81 PSIDLDDVVSFEQREEFRDEDEKFDEELLEILNNH-NFPYDDPTKPLWRLIVLPNEDDESFQFIVFVFHHAIFDGMSGKI 159 (480)
T ss_pred CeEEHHHeeccCCccccccCCccccHHHHHHHhhc-ccCCCCCCCCCeEEEEECCCCCCcceEEEEEecccccccHHHHH
Confidence 8999999993321100 0000 0345555555433 3344444 599999999874333466889999999999999999
Q ss_pred HHHHHcccCCCCCCCCC------CCCCC---CCCCCCC-CCCCchH---HHHHHHHHHHHHHHHHHHHHHHhccccCCC-
Q 041931 170 LLLACCRKVSDPNEVPT------IPSVT---KKIDSNG-HSKGFWP---YLLFKLWLFWNTLVDVVMFIATALMFVRDT- 235 (491)
Q Consensus 170 l~~~l~~~~~~p~~~~~------~p~~~---~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 235 (491)
|+.+++.........+. +.... ......| .....+. ..+......+.. ++...+ .....
T Consensus 160 Fh~~ll~~L~~~~~~~~~~~~~~i~~~~~~~~~~~~LP~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~ 232 (480)
T PF07247_consen 160 FHEDLLEALNSLSSDPEPDDNDVIFDPSSDVEHLPSLPPPIEELIKSSPSLYFLPKSLWSS------FIFPSL-FFSKWS 232 (480)
T ss_pred HHHHHHHHHhhccccccccccCceecCCcccccccCCCcCHHHhhhccccHHHHHHHHHHH------hhhhhc-cccccc
Confidence 99998865422111110 00000 0000111 0000000 011111111111 011101 00000
Q ss_pred CCCc--cCCCC---CCCCCeEEEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCC
Q 041931 236 KTPL--KGELG---NGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLP 310 (491)
Q Consensus 236 ~~~~--~~~~~---~~~~~r~~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p 310 (491)
..+. ...+. ..+..+.+......++.+.+.||++|+|++..+.|+++.||.+....... ..
T Consensus 233 ~~~~~~~~~~~~~~~~t~~~~~~i~~~~~~~ll~~CR~~~~TlT~~L~al~~~al~~~~~~~~~--------------~~ 298 (480)
T PF07247_consen 233 DKPIFATIPPIPKPFKTRYRSLSISPEELKKLLKACRKHGTTLTALLHALIALALSKVQLPKPK--------------SE 298 (480)
T ss_pred cCCccCCCCccccCCcceEEEEEECHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhccccc--------------cc
Confidence 0111 11111 10112233344455677888999999999999999999999874222111 01
Q ss_pred CCcceEEEEEeeecCCCChhHHHHHhhcCCCCCCCceEEEEEe--ee-ccC----CCCCHHHHHHHHHHHHHHHHhchhh
Q 041931 311 NNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIF--PF-TIA----LRDDPLDYLREAKVAMDRKKASLEA 383 (491)
Q Consensus 311 ~~~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~--~l-p~~----~~~~~~~rl~~v~~~~~~~k~~~~~ 383 (491)
. ..+.+.+|||+|+..... . ++ ......|+.++.... .+ +.. ..+++++..+.+++.+.+..+....
T Consensus 299 ~-~~~~~~~pvnlR~~~p~~-~-~~---~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~fW~~a~~~~~~i~~~i~~~~~ 372 (480)
T PF07247_consen 299 K-SSFKISTPVNLRRFLPED-S-EL---RDEYSYGNFVGGIDFSYSISPVSASRGSSENFWELARQIQKEIKESIKNGKS 372 (480)
T ss_pred C-ceEEEEeeeeCCCCCCcc-c-cc---cccccceeEEEccceeeecccccccccchHHHHHHHHHHHHHHHHHHhcccc
Confidence 1 268999999999975421 0 00 012356777765333 11 111 1135688888888888775443322
Q ss_pred hHH--HHHHHHHH------HHh-HhhcCCCCcceEEEeccCCCccceEEcCceeeEeecc-cc-CCCceeEEEEEEeC-C
Q 041931 384 SFS--YFLSKSFL------KFC-NKAASFPSETTLWFSNVMGPQEEISLYGYPIAYVAPS-CC-GQPNGLMIHVVSYA-N 451 (491)
Q Consensus 384 ~~~--~~~~~~l~------~~~-~~~~~~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~-~~-~~~~~l~v~v~sy~-~ 451 (491)
... ..+..++. .++ .++.. ....++.+||++-... -.-++..|.++++. +. ..+..+.++++|.+ |
T Consensus 373 ~~~~~~~~~~~l~~~~d~~~~~~~~~~~-~r~~t~evSNLG~~~~-~~~~~~~I~~~~Fsq~~~~~~~~f~~~viS~~~G 450 (480)
T PF07247_consen 373 LNGVGFLMNDFLLKYVDIWDFFKSKIGK-PRRSTFEVSNLGVFDF-EENGKWKIEDMVFSQSAGVIGSAFSFNVISTKGG 450 (480)
T ss_pred cchhhhHHHHHHhccCCHHHHHHhhcCC-CCCCcEEEEeCCcccC-CCCCCeEEEEEEEeCCCCCCcCCEEEEEEEcCCC
Confidence 111 11111111 122 22222 2256899999985443 34466789998885 43 35667899999975 8
Q ss_pred EEEEEEEecCCCCCCHH
Q 041931 452 KMTFVLSVDDGLIPDPH 468 (491)
Q Consensus 452 ~l~~~v~~d~~~~~d~~ 468 (491)
.|.|++++.++++.+.+
T Consensus 451 ~L~i~~s~~~~~~~~~~ 467 (480)
T PF07247_consen 451 GLNISISWQEGIVEDEE 467 (480)
T ss_pred ceEEEEEEeCCcccccc
Confidence 99999999999887543
No 6
>PRK09294 acyltransferase PapA5; Provisional
Probab=99.87 E-value=5e-20 Score=191.42 Aligned_cols=391 Identities=13% Similarity=0.118 Sum_probs=225.7
Q ss_pred CCccCChhhhhccCCCCceEEEEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEeeecCCCcceeee
Q 041931 25 ENQPLSPMARMFHEPESNVYIVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVPTKVNLDDHVIVP 104 (491)
Q Consensus 25 ~~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~~~~d~~~hv~~~ 104 (491)
.-++|++.+++|...... +...++++|.+|.+.|++++++.+.+||.||+++... ..+.+.++.. -+....+.+.
T Consensus 6 ~~~~L~~~~~~f~~~~~~--~~~~~~l~g~lD~~~L~~Al~~l~~rhp~Lr~~~~~~--~~~~~~~~~~-~~~~~~v~~~ 80 (416)
T PRK09294 6 VIRKLAPSEEVFARYEAF--TGYTAHLRGVLDIDALSDAFDALLRAHPVLAAHLEQD--SDGGWELVAD-DLLHPGIVVV 80 (416)
T ss_pred cccCCchHHhhhhccCce--EEEEEEEcCCCCHHHHHHHHHHHHHhCHHhhEEEEEC--CCCceEEeeC-CcCCCCeEEE
Confidence 358999999999874433 3357889999999999999999999999999999643 2343444431 1222233333
Q ss_pred cCCCCCCCCcHHHHHHHHHHhhcCCCCCC--CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcccCCCC-
Q 041931 105 NLEPKLIDSPDKFVEDYTSSLSQTGIKMS--MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDP- 181 (491)
Q Consensus 105 ~l~~~~~~~~~~~l~~~i~~~~~~p~d~~--~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p- 181 (491)
++. +.++ .++++.+ .|++++.++.+ ++++.+++.+||+++||+|+..++.+++..|...
T Consensus 81 d~~------~~~~---------~~~~~l~~~~~l~~~~~~~~---~~~~~l~l~~hH~i~DG~S~~~ll~el~~~Y~~~~ 142 (416)
T PRK09294 81 DGD------AARP---------LPELQLDQGVSLLALDVVPD---DGGARVTLYIHHSIADAHHSASLLDELWSRYTDVV 142 (416)
T ss_pred ecc------cccc---------cCCCCCCCCCceEEEEEEEc---CCCEEEEEEeccEeEccccHHHHHHHHHHHHHHHH
Confidence 221 1111 3556664 35899988764 4678999999999999999999999988766321
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-HHHHHHHHHHhc--cccCCCCCCccCCCCCCCCCeEEEEee
Q 041931 182 --NEVPTIPSVTKKIDSNGHSKGFWPYLLFKLWLFWNT-LVDVVMFIATAL--MFVRDTKTPLKGELGNGCLPRRFVHRS 256 (491)
Q Consensus 182 --~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~~~~~ 256 (491)
...+..+..+.. .. ..+.... +..+.. ..+...+....+ .....+..+...+... ..........
T Consensus 143 ~~~~~~~~~~~~~~-------~~-~ed~~~~-~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~~~~~~~~ 212 (416)
T PRK09294 143 TTGDPGPIRPQPAP-------QS-LEAVLAQ-RGIRRQALSGAERFMPAMYAYELPPTPTAAVLAKPGL-PQAVPVTRCR 212 (416)
T ss_pred hCCCCCCCCCCCCC-------cC-HHHHHHh-cCCCcccccchhhhhhhhccccCCCCCcCcCCCCCCC-CCCCceeEEE
Confidence 111111100000 00 1111000 000000 000000000000 0001111111111000 0011222345
Q ss_pred ec---hHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecCCCChhHHH
Q 041931 257 VS---LDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELA 333 (491)
Q Consensus 257 ~~---l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~~~~~~ 333 (491)
++ .+++++.||++|+|+|.+++|+++.++.++... ++ ..+.+++||++|.....+ +
T Consensus 213 l~~~~~~~L~~~a~~~~~t~~~~l~Aa~~~~l~r~~~~------------------~~-~~i~~~~pv~~R~~l~p~-~- 271 (416)
T PRK09294 213 LSKAQTSSLAAFGRRHRLTVNALVSAAILLAEWQLRRT------------------PH-VPLPYVYPVDLRFRLTPP-V- 271 (416)
T ss_pred eCHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCC------------------CC-CceeeecchhhHhhcCCC-C-
Confidence 55 789999999999999999999999999887421 22 367889999999753210 0
Q ss_pred HHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCCC-CcceEEEe
Q 041931 334 NMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASFP-SETTLWFS 412 (491)
Q Consensus 334 ~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~S 412 (491)
.....+|.++.+...+..+...++.+.+++++++++........ ...+... ...+. .... ....+.+|
T Consensus 272 ------~~~~~~n~~g~~~~~~~~~~~~sf~ela~~v~~~~~~~l~~~~v--~~~~~~~-~~~~~--~~~~~~~~~v~~S 340 (416)
T PRK09294 272 ------AATEGTNLLGAATYLAEIGPDTDIVDLARAIAATLRADLADGVI--QQSFLHF-GTAFE--GTPPGLPPVVFIT 340 (416)
T ss_pred ------CcccceeeEeeeeeeccccCCCCHHHHHHHHHHHHhhhhhccee--eehhhcc-ccccc--CCCCCCCCeEEEe
Confidence 12367999988777777654568999999999999866554331 1011111 00010 1111 12367889
Q ss_pred ccCCCccceEEcCceeeEeec-c--ccCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Q 041931 413 NVMGPQEEISLYGYPIAYVAP-S--CCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTA 484 (491)
Q Consensus 413 Nvpgp~~~l~~~G~~v~~~~~-~--~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~ 484 (491)
|++....+-.-.|.++..+.. + ....+. ...+++||+|+|.|+|.+... .++...+++.+.|..+.+.
T Consensus 341 nlg~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~i~f~~~~~---~~~~~~~~~~~~~~~~~~~ 411 (416)
T PRK09294 341 NLGVAPPMRTPPGLELEDIHSQFYCAISVPI-GGYSCGVFAGRLLIEHHGHIA---APGKSLEAIRELLCTVPSE 411 (416)
T ss_pred cCCcCCCCCCCCCeEEEeeeeeeeecccCce-eEEEEeeecCceeeeeccCcC---CccchHHHHHHHHHhhhhh
Confidence 987543322234555554433 1 122222 347889999999999999854 3447777888887777543
No 7
>PRK12467 peptide synthase; Provisional
Probab=99.86 E-value=2e-19 Score=228.72 Aligned_cols=400 Identities=17% Similarity=0.192 Sum_probs=256.4
Q ss_pred CCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCC
Q 041931 25 ENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNL 97 (491)
Q Consensus 25 ~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~ 97 (491)
...|||++|+.+| ++....|++ ..+++.|++|.++|++++.+.+.+|+.||+++... .+.++++- +..++
T Consensus 48 ~~~pLS~~Q~~lw~~~~~~~~~~~Yni~~~~~l~g~lD~~~L~~A~~~vv~rH~~LRt~f~~~---~~~~~q~v~~~~~~ 124 (3956)
T PRK12467 48 ERIPLSYAQERQWFLWQLDPDSAAYNIPTALRLRGELDVSALRRAFDALVARHESLRTRFVQD---EEGFRQVIDASLSL 124 (3956)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCCceeccEEEEEeCCCCHHHHHHHHHHHHHHhhhheEEEEec---CCeEEEEEcCCCCC
Confidence 4579999999544 566677765 77899999999999999999999999999999864 46676554 44444
Q ss_pred CcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcc
Q 041931 98 DDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 98 ~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
+.++. ++.....+..+..+.+++.+...+|||+. .|+|++.+++. +++++.+++.+||+++||+|+..++.++..
T Consensus 125 ~i~~~--d~~~~~~~~~~~~~~~~~~~~~~~~fdL~~~pl~r~~l~~~--~~~~~~l~l~~HHii~DG~S~~~l~~el~~ 200 (3956)
T PRK12467 125 TIPLD--DLANEQGRARESQIEAYINEEVARPFDLANGPLLRVRLLRL--ADDEHVLVVTLHHIISDGWSMRVLVEELVQ 200 (3956)
T ss_pred ceeEE--ecccCChhhHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEE--CCCcEEEEEecCeeeEccchHHHHHHHHHH
Confidence 43332 22111100035578888999999999986 69999999985 257899999999999999999999999887
Q ss_pred cCCCCCC--CCCCCCCCCCCCCCCCCCCchHHHHH--------HHHHHHHHHHHHHHHHHHhccccCCCCCCcc----CC
Q 041931 177 KVSDPNE--VPTIPSVTKKIDSNGHSKGFWPYLLF--------KLWLFWNTLVDVVMFIATALMFVRDTKTPLK----GE 242 (491)
Q Consensus 177 ~~~~p~~--~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 242 (491)
.|..... .+.++..+ .....|..+... .-..+|+.. +.. ..+...+. .+
T Consensus 201 ~Y~~~~~g~~~~~~~~~------~~y~dy~~~~~~~l~~~~~~~~~~yW~~~------L~~-----~~~~~~lp~~~~~~ 263 (3956)
T PRK12467 201 LYSAYSQGREPSLPALP------IQYADYAIWQRSWLEAGERERQLAYWQEQ------LGG-----EHTVLELPTDRPRP 263 (3956)
T ss_pred HHHHHhcCCCCCCCCCC------CCHHHHHHHHHHHhcChhhHHHHHHHHHH------hcc-----CCCcCCCCCCCCCC
Confidence 6632110 01111110 000111111100 011233321 111 01111111 11
Q ss_pred CCCCCCCeE--EEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEE
Q 041931 243 LGNGCLPRR--FVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFF 320 (491)
Q Consensus 243 ~~~~~~~r~--~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vP 320 (491)
......... +....-..++++++|+++|+|++.+++||++..|++|.. . +++.+++|
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~L~~~a~~~g~T~~~vl~aA~a~lL~r~tg---~------------------~dv~iG~p 322 (3956)
T PRK12467 264 AVPSYRGARLRVDLPQALSAGLKALAQREGVTLFMVLLASFQTLLHRYSG---Q------------------SDIRIGVP 322 (3956)
T ss_pred CCCCcCceeEEEeCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC---C------------------CCEEEEec
Confidence 000001111 222233357899999999999999999999999999952 2 27999999
Q ss_pred eeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHh-
Q 041931 321 MNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNK- 399 (491)
Q Consensus 321 VslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~- 399 (491)
++.|...+. +..+|.+++.+++.+..+...++.+.++++++++.....+....+.. +.+.+. . .+
T Consensus 323 vsgR~~~~~-----------~~~iG~fiNtlplrv~~~~~~t~~~ll~~v~~~~~~a~~hq~~p~~~-l~~~l~-~-~~~ 388 (3956)
T PRK12467 323 NANRNRVET-----------ERLIGFFVNTQVLKAEVDPQASFLELLQQVKRTALGAQAHQDLPFEQ-LVEALQ-P-ERS 388 (3956)
T ss_pred cCCCCchhh-----------hcceeeeeeeeeeEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhC-C-CCC
Confidence 999986432 34688888888888887756689999999999988888777654432 112110 0 11
Q ss_pred hc-CCCCcceEEEeccCCC---ccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCC--HHHHHHH
Q 041931 400 AA-SFPSETTLWFSNVMGP---QEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPD--PHKLCDD 473 (491)
Q Consensus 400 ~~-~~~~~~~~~~SNvpgp---~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d--~~~l~~~ 473 (491)
.. ..+++..+.+.|.+.. .....+.|..+..+..........+++.+...++.+.+.+.++.+++.. ++.+.+.
T Consensus 389 ~~~~plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~lf~~~~~~~~~~~ 468 (3956)
T PRK12467 389 LSHSPLFQVMFNHQNTATGGRDREGAQLPGLTVEELSWARHTAQFDLALDTYESAQGLWAAFTYATDLFEATTIERLATH 468 (3956)
T ss_pred CCCCCceEEEEEeecccccccccccccCCCceEEEeecCCCceeeeeEEEEEecCCcEEEEEEEecccCCHHHHHHHHHH
Confidence 11 1344444555565422 1123456666655533222334678888888888999999999999963 5666777
Q ss_pred HHHHHHHHHH
Q 041931 474 LEESLHLIKT 483 (491)
Q Consensus 474 ~~~~l~~l~~ 483 (491)
|...|..+..
T Consensus 469 ~~~~l~~~~~ 478 (3956)
T PRK12467 469 WRNLLEAIVA 478 (3956)
T ss_pred HHHHHHHHhh
Confidence 7777766654
No 8
>PRK12467 peptide synthase; Provisional
Probab=99.84 E-value=6.8e-19 Score=223.87 Aligned_cols=399 Identities=14% Similarity=0.142 Sum_probs=252.2
Q ss_pred CCCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecC
Q 041931 24 EENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVN 96 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d 96 (491)
....|||+.|+.+| ++....|++ ..++++|.+|.++|++++...+.+|+.||+++... .+.++.+- +...
T Consensus 1114 ~~~~PlS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~L~~Al~~vv~rH~~LRT~f~~~---~~~~~q~v~~~~~ 1190 (3956)
T PRK12467 1114 DQPLPLSYAQERQWFLWQLEPGSAAYHIPQALRLKGPLDIEALERSFDALVARHESLRTTFVQE---DGRTRQVIHPVGS 1190 (3956)
T ss_pred ccccccchHHHHHHHHHhhCCCCccceeeEEEEECCCcCHHHHHHHHHHHHHhCCcceEEEEcc---CCeEEEEECCCCC
Confidence 44579999999543 456666754 77899999999999999999999999999999864 45665543 4333
Q ss_pred CCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHc
Q 041931 97 LDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACC 175 (491)
Q Consensus 97 ~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~ 175 (491)
+...+. .+.... ..++++.+++.+...+|||.. .|+|++.+++. +++++.+++.+||+++||+|+..++.++.
T Consensus 1191 ~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~fdl~~~pl~R~~l~~~--~~~~~~l~l~~HHii~DG~S~~ill~el~ 1264 (3956)
T PRK12467 1191 LTLEEP--LLLAAD--KDEAQLKVYVEAEARQPFDLEQGPLLRVGLLRL--AADEHVLVLTLHHIVSDGWSMQVLVDELV 1264 (3956)
T ss_pred CceEEe--ecCccc--chHHHHHHHHHHHhhCCCCCCCCcceeEEEEEE--CCCeEEEEEecchhhhhHhHHHHHHHHHH
Confidence 332222 211111 045678888988899999997 59999999985 25788999999999999999999999988
Q ss_pred ccCCCC--CCCCCCCCCCCCCCCCCCCCCchHHHHHH--------HHHHHHHHHHHHHHHHHhccccCCCCCCc--cCCC
Q 041931 176 RKVSDP--NEVPTIPSVTKKIDSNGHSKGFWPYLLFK--------LWLFWNTLVDVVMFIATALMFVRDTKTPL--KGEL 243 (491)
Q Consensus 176 ~~~~~p--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 243 (491)
..|... ...+.+|..+. ....|..+.... ...+|+.- +.. ..+...+ ..+.
T Consensus 1265 ~~Y~~~~~g~~~~l~~~~~------~y~dy~~wq~~~l~~~~~~~~~~yW~~~------L~~-----~~~~~~lp~~~~~ 1327 (3956)
T PRK12467 1265 ALYAAYSQGQSLQLPALPI------QYADYAVWQRQWMDAGERARQLAYWKAQ------LGG-----EQPVLELPTDRPR 1327 (3956)
T ss_pred HHHHHHhCCCCCCCCCCCC------CHHHHHHHHHHHhcCchHHHHHHHHHHH------hcC-----CCCcccCCCCCCC
Confidence 766311 11111211110 001111111111 01223211 110 0111111 1110
Q ss_pred C--CCCCCeEE--EEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEE
Q 041931 244 G--NGCLPRRF--VHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATF 319 (491)
Q Consensus 244 ~--~~~~~r~~--~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~v 319 (491)
. ......++ ....-..+.+++.|+++|+|++.+++||++..|++|... +++.+++
T Consensus 1328 ~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~vT~~~vl~aA~a~lL~r~sg~---------------------~dvv~G~ 1386 (3956)
T PRK12467 1328 PAVQSHRGARLAFELPPALAEGLRALARREGVTLFMLLLASFQTLLHRYSGQ---------------------DDIRVGV 1386 (3956)
T ss_pred CcccCcCceEEEEEeCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCC---------------------CCEEEEe
Confidence 0 00011111 122233478999999999999999999999999999532 2799999
Q ss_pred EeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHh
Q 041931 320 FMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNK 399 (491)
Q Consensus 320 PVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~ 399 (491)
|++.|...+. +..+|-+++.+++++..+...++.+.|++++++......+....+... .+.+ ..-..
T Consensus 1387 pvsgR~~~~~-----------~~~vG~fvNtlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~i-~~~l-~~~r~ 1453 (3956)
T PRK12467 1387 PIANRNRAET-----------EGLIGFFVNTQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQL-VEAL-QPERS 1453 (3956)
T ss_pred cccCCCchhh-----------hcceeeeeeeeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHHH-HHHh-ccccc
Confidence 9999986432 345788888888888776566899999999999888877766554421 1211 10011
Q ss_pred hcC-CCCcceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCC--HHHHHHHHHH
Q 041931 400 AAS-FPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPD--PHKLCDDLEE 476 (491)
Q Consensus 400 ~~~-~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d--~~~l~~~~~~ 476 (491)
... ++++.-+++.|.+... ...+.|..+..+..........+++.+.-.++.+.+.+.++.+++.. ++.+.+.|..
T Consensus 1454 ~~~~pLFq~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~ 1532 (3956)
T PRK12467 1454 LSHSPLFQVMFNHQRDDHQA-QAQLPGLSVESLSWESQTAQFDLTLDTYESSEGLQASLTYATDLFEASTIERLAGHWLN 1532 (3956)
T ss_pred CCCCCceeEEEEeecccccc-cccCCCceeEeeecCCcccccceEEEEEecCCeEEEEEEEeCCcCCHHHHHHHHHHHHH
Confidence 111 3343334444433211 13455655544432122334578888877788999999999999953 5677777777
Q ss_pred HHHHHHH
Q 041931 477 SLHLIKT 483 (491)
Q Consensus 477 ~l~~l~~ 483 (491)
.|+.+.+
T Consensus 1533 lL~~l~~ 1539 (3956)
T PRK12467 1533 LLQGLVA 1539 (3956)
T ss_pred HHHHHhh
Confidence 7777654
No 9
>PRK12316 peptide synthase; Provisional
Probab=99.82 E-value=4e-18 Score=220.49 Aligned_cols=397 Identities=15% Similarity=0.153 Sum_probs=252.0
Q ss_pred CCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCC
Q 041931 25 ENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNL 97 (491)
Q Consensus 25 ~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~ 97 (491)
...|||+.|+.+| .+....|++ ..++++|.+|.++|++++...+.+||.||+++... .+.++++- +..++
T Consensus 2601 ~~~pls~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~L~~A~~~lv~rH~~LRt~f~~~---~~~~~q~v~~~~~~ 2677 (5163)
T PRK12316 2601 QPLPLSHAQQRQWFLWQLEPESAAYHLPSALHLRGVLDQAALEQAFDALVLRHETLRTRFVEV---GEQTRQVILPNMSL 2677 (5163)
T ss_pred cCCCCChHHHhHHHHcccCCCccccccceEEEEcCCcCHHHHHHHHHHHHHHhhHhhcceeee---CCeEEEEECCCCCc
Confidence 3578999998443 355556654 77899999999999999999999999999999874 45565554 44333
Q ss_pred CcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcc
Q 041931 98 DDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 98 ~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
..+.. ... .. .++++++++.+...+|||.. .|+|++.+++. .++.+.+++.+||+++||+|+..++.++..
T Consensus 2678 ~~~~~--~~~-~~---~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~l~~HHii~DG~S~~~l~~eL~~ 2749 (5163)
T PRK12316 2678 RIVLE--DCA-GV---ADAAIRQRVAEEIQRPFDLARGPLLRVRLLAL--DGQEHVLVITQHHIVSDGWSMQVMVDELVQ 2749 (5163)
T ss_pred cceee--ccc-cC---CHHHHHHHHHHHhhCCCCCCCCCcEEEEEEEE--CCCeEEEEEecCcCcccHhHHHHHHHHHHH
Confidence 32221 111 11 56778889999999999997 59999999986 256789999999999999999999999887
Q ss_pred cCCCC--CCCCCCCCCCCCCCCCCCCCCchHHHH--------HHHHHHHHHHHHHHHHHHHhccccCCCCCCccCCC--C
Q 041931 177 KVSDP--NEVPTIPSVTKKIDSNGHSKGFWPYLL--------FKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGEL--G 244 (491)
Q Consensus 177 ~~~~p--~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 244 (491)
.|... ...+.+|.... ....|..+.. .....+|+.. +.. .......|...+. .
T Consensus 2750 ~Y~~~~~g~~~~l~~~~~------~y~dy~~~~~~~~~~~~~~~~~~yW~~~------L~~---~~~~~~lp~~~~~~~~ 2814 (5163)
T PRK12316 2750 AYAGARRGEQPTLPPLPL------QYADYAAWQRAWMDSGEGARQLDYWRER------LGG---EQPVLELPLDRPRPAL 2814 (5163)
T ss_pred HHHHHhcCCCCCCCCCCC------CHHHHHHHHHHHhcCchHHHHHHHHHHH------hcC---CCCcccCCccCCCCcc
Confidence 66321 11111211110 0011111110 0111233321 111 0000011111110 0
Q ss_pred CCCCCeE--EEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEee
Q 041931 245 NGCLPRR--FVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMN 322 (491)
Q Consensus 245 ~~~~~r~--~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVs 322 (491)
....... +.......+++++.|+++|+|++.+++||++..|++|... +++.+++|++
T Consensus 2815 ~~~~~~~~~~~l~~~~~~~L~~~a~~~~vT~~~~l~aA~a~~L~r~tg~---------------------~dv~iG~pvs 2873 (5163)
T PRK12316 2815 QSHRGARLDVALDVALSRELLALARREGVTLFMLLLASFQVLLHRYSGQ---------------------SDIRVGVPIA 2873 (5163)
T ss_pred CCCCCceEEEECCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCC---------------------CceEEEeeec
Confidence 0001111 2223334578899999999999999999999999999532 2799999999
Q ss_pred ecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcC
Q 041931 323 LRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAAS 402 (491)
Q Consensus 323 lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~ 402 (491)
.|...+ + +..+|.+++.+++.+..+...++.+.|+++++++.....+....+.. +.+.+.. -.....
T Consensus 2874 gR~~~~---~--------~~~iG~fvntlPlrv~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~-~r~~~~ 2940 (5163)
T PRK12316 2874 NRNRAE---T--------ERLIGFFVNTQVLRAQVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVEALQP-ERSLSH 2940 (5163)
T ss_pred CCCchh---H--------HhhhhheecceeEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhcc-ccccCC
Confidence 996543 2 23589999888888887656689999999999988887776654442 1121110 011111
Q ss_pred -CCCcceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCC--CHHHHHHHHHHHHH
Q 041931 403 -FPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIP--DPHKLCDDLEESLH 479 (491)
Q Consensus 403 -~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~--d~~~l~~~~~~~l~ 479 (491)
.+++..+++.|.+ .....+.|..+..+..........+.+.+...++.+.+.+.++.+++. ..+.+.+.|...|.
T Consensus 2941 ~plf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~~~~~~~i~~l~~~f~~lL~ 3018 (5163)
T PRK12316 2941 SPLFQVMYNHQSGE--RAAAQLPGLHIESFAWDGAATQFDLALDTWESAEGLGASLTYATDLFDARTVERLARHWQNLLR 3018 (5163)
T ss_pred CCceeEEEeeeccc--cccccCCCceeEeeeccCCccceeeEEEEEecCCcEEEEEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 3333344444433 222345565555443222234457888888888889999999999995 36677777777777
Q ss_pred HHHH
Q 041931 480 LIKT 483 (491)
Q Consensus 480 ~l~~ 483 (491)
++.+
T Consensus 3019 ~l~~ 3022 (5163)
T PRK12316 3019 GMVE 3022 (5163)
T ss_pred HHHh
Confidence 7754
No 10
>PRK12316 peptide synthase; Provisional
Probab=99.81 E-value=9.6e-18 Score=216.95 Aligned_cols=401 Identities=13% Similarity=0.158 Sum_probs=248.2
Q ss_pred CCCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEE-eeecC
Q 041931 24 EENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWV-PTKVN 96 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~-~~~~d 96 (491)
+...|||+.|+.+| .+....|++ ..+++.|++|.++|++++.+.+.+|+.||+++... .+.+..+ .+...
T Consensus 47 ~~~~plS~~Q~~lw~~~~l~~~~~~yn~~~~~~i~g~ld~~~l~~A~~~vv~rHe~LRt~f~~~---~~~~~q~v~~~~~ 123 (5163)
T PRK12316 47 AERDRLSYAQQRMWFLWQLEPQSGAYNLPSAVRLNGPLDRQALERAFASLVQRHETLRTVFPRG---ADDSLAQVPLDRP 123 (5163)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCCcchhcEEEEEeCCCCHHHHHHHHHHHHHHhhhceEEEEee---CCeEEEEECCCCC
Confidence 44579999999554 455566655 77899999999999999999999999999999864 4455332 23222
Q ss_pred CCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHc
Q 041931 97 LDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACC 175 (491)
Q Consensus 97 ~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~ 175 (491)
++. .+.++.....+..++.+.+++.+...+|||+. .|+|++.+++. +++++.+++.+||+++||+|+..++.++.
T Consensus 124 ~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~pfdl~~~pl~r~~l~~~--~~~~~~l~l~~HHii~Dg~S~~~l~~el~ 199 (5163)
T PRK12316 124 LEV--EFEDCSGLPEAEQEARLRDEAQRESLQPFDLCEGPLLRVRLLRL--GEEEHVLLLTLHHIVSDGWSMNVLIEEFS 199 (5163)
T ss_pred CCc--cEEECCCCChhhHHHHHHHHHHHhhcCCCCCCCCCceEEEEEEE--CCCcEEEEEcccceeechhHHHHHHHHHH
Confidence 221 12222111100023345556666669999996 59999999985 25788999999999999999999999998
Q ss_pred ccCCCCC--CCCCCCCCCCCCCCCCCCCCchHHHHH--------HHHHHHHHHHHHHHHHHHhccccCCCCC--CccCC-
Q 041931 176 RKVSDPN--EVPTIPSVTKKIDSNGHSKGFWPYLLF--------KLWLFWNTLVDVVMFIATALMFVRDTKT--PLKGE- 242 (491)
Q Consensus 176 ~~~~~p~--~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 242 (491)
..|.... ..+.++.... ....|..+... ....+|..- +.. ..+.. |...+
T Consensus 200 ~~Y~~~~~~~~~~l~~~~~------~y~dy~~~q~~~~~~~~~~~~~~yW~~~------l~~-----~~~~~~lp~~~~~ 262 (5163)
T PRK12316 200 RFYSAYATGAEPGLPALPI------QYADYALWQRSWLEAGEQERQLEYWRAQ------LGE-----EHPVLELPTDHPR 262 (5163)
T ss_pred HHHHHHhcCCCCCCCCCCC------CHHHHHHHHHHHhcChhHHHHHHHHHHH------hCC-----CCccccCCCCCCC
Confidence 7763211 1111211110 00111111111 011223211 111 01111 11111
Q ss_pred C-CCCCCCeE--EEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEE
Q 041931 243 L-GNGCLPRR--FVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATF 319 (491)
Q Consensus 243 ~-~~~~~~r~--~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~v 319 (491)
+ .......+ +....-..+.++++|+++|+|++.+++|+++..|++|... +++.+++
T Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~T~~~~llaa~a~lL~~~tg~---------------------~dv~ig~ 321 (5163)
T PRK12316 263 PAVPSYRGSRYEFSIDPALAEALRGTARRQGLTLFMLLLGAFNVLLHRYSGQ---------------------TDIRVGV 321 (5163)
T ss_pred CCCCCcCCeeEEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC---------------------CCeEEEe
Confidence 0 00001111 1122233578999999999999999999999999998532 2799999
Q ss_pred EeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHh
Q 041931 320 FMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNK 399 (491)
Q Consensus 320 PVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~ 399 (491)
|++.|...+. +..+|.+++.+.+.+..+...++.+.++++++.+.....+....+.. +.+.+ .. .+
T Consensus 322 pvs~R~~~~~-----------~~~vG~f~n~lplr~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~~l-~~-~r 387 (5163)
T PRK12316 322 PIANRNRAEV-----------EGLIGFFVNTQVLRSVFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVEAL-KV-ER 387 (5163)
T ss_pred eeCCCCchhh-----------hcceeeeeeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHh-CC-CC
Confidence 9999976542 34688999888888888755689999999999998888877664442 11211 10 11
Q ss_pred -hcC-CCCcceEEEeccCC-CccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCC--CHHHHHHHH
Q 041931 400 -AAS-FPSETTLWFSNVMG-PQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIP--DPHKLCDDL 474 (491)
Q Consensus 400 -~~~-~~~~~~~~~SNvpg-p~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~--d~~~l~~~~ 474 (491)
... ++++..+.+.|... ......+.|..+..+..........+.+.+...++.+.+.+.++.+++. ..+.+.+.|
T Consensus 388 ~~~~~plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~lf~~~~i~~l~~~~ 467 (5163)
T PRK12316 388 SLSHSPLFQVMYNHQPLVADIEALDTVAGLEFGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYATDLFEARTVERMARHW 467 (5163)
T ss_pred CCCCCCcEEEEEEeecccccccccccCCCceEEeeccCCCccceeEEEEEEEcCCcEEEEEEEchhhCCHHHHHHHHHHH
Confidence 111 33333344444332 2222345665555443222233456888888889999999999999995 356667777
Q ss_pred HHHHHHHHH
Q 041931 475 EESLHLIKT 483 (491)
Q Consensus 475 ~~~l~~l~~ 483 (491)
...|..+.+
T Consensus 468 ~~lL~~i~~ 476 (5163)
T PRK12316 468 QNLLRGMVE 476 (5163)
T ss_pred HHHHHHHHh
Confidence 766666644
No 11
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=99.80 E-value=4.2e-18 Score=167.86 Aligned_cols=274 Identities=17% Similarity=0.192 Sum_probs=155.3
Q ss_pred CCccCChhhh-hcc----CCCCceE-EEEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCC
Q 041931 25 ENQPLSPMAR-MFH----EPESNVY-IVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNL 97 (491)
Q Consensus 25 ~~~~Ls~~d~-~~~----~~~~~v~-~~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~ 97 (491)
...|||++|+ +|+ .+....+ +..+++++|.+|.+.|++++...+.+||.||+++... ....++... ...++
T Consensus 3 ~~~plt~~Q~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~l~~A~~~~~~~h~~Lr~~~~~~--~~~~~~~~~~~~~~~ 80 (301)
T PF00668_consen 3 DVYPLTPAQQGIWLLQQLSPDSSSYNIAFVFELDGPIDIERLRQALERLIARHPILRTRFEED--DGFEPYQRVLESSSI 80 (301)
T ss_dssp SCEE--HHHHHHHHHHHHSTTSTTTEEEEEEEEEES--HHHHHHHHHHHHHH-GGGGEEEEEC--TTCSSEEEEESEEET
T ss_pred CccCCHHHHHHHHHHhccCCCCCcEEEEEEEEecCccchHHHhhhhHhhhhhhhhhhheeeee--cccccceeeeecccc
Confidence 4679999999 443 3333333 4477899999999999999999999999999999985 222443332 22222
Q ss_pred CcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcc
Q 041931 98 DDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 98 ~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
+... .++. ..+....+..+++.+...+++|.+ .|++++.+++.- ++++.+++.+||+++||+|+..++.++.+
T Consensus 81 ~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~l~~~~--~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~ 154 (301)
T PF00668_consen 81 EIEY--IDVS--SDSDSEEEILELIEQELNRPFDLSEGPLFRFTLIRTS--DDEYFLLISFHHIICDGWSLNILLRELLQ 154 (301)
T ss_dssp TCEE--EECC--TS-HHHHHHHHHHHHHHCC---TCTSBSEEEEEEEEE--TTEEEEEEEEEGGG--HHHHHHHHHHHHH
T ss_pred cccc--cccc--ccccchhhhhhhhhhhhhhcccccccchhhccccccc--cccchhcccccccccccccchhhhhhhHH
Confidence 2211 1111 100035788888888899999986 599999999873 45899999999999999999999999988
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCchHHH--------HHHHHHHHHHHHHHHHHHHHhccccCCCC--CCcc-CCCCC
Q 041931 177 KVSDPNEVPTIPSVTKKIDSNGHSKGFWPYL--------LFKLWLFWNTLVDVVMFIATALMFVRDTK--TPLK-GELGN 245 (491)
Q Consensus 177 ~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~ 245 (491)
.|.... ...+... .....+.... ....+.+|.. .+ ....+. .+.. .....
T Consensus 155 ~y~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~W~~----------~l-~~~~~~~~~~~~~~~~~~ 215 (301)
T PF00668_consen 155 AYAGLS--NPLPAPS------PSYKDFVEFQREYRNSDRLQEARAFWRE----------YL-RGVPPAPSLPPDFPRPSI 215 (301)
T ss_dssp HHHHHH--TT----S-------BHHHHHHHHHHHHTSHHHHHHHHHHHH----------HC-CTS-----CTTTT--CSS
T ss_pred hhhccc--ccccccc------cccccccccccccccccccccccccccc----------cc-cccccccccccccccccc
Confidence 764322 0011110 0000000000 0011112221 11 000110 1111 11111
Q ss_pred CCCCeEEEEeee---chHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEee
Q 041931 246 GCLPRRFVHRSV---SLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMN 322 (491)
Q Consensus 246 ~~~~r~~~~~~~---~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVs 322 (491)
...........+ ..+.+++.|+++|+|++++++||++.+|++|... .++.+++|++
T Consensus 216 ~~~~~~~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~l~~~~~~---------------------~~~~i~~~~~ 274 (301)
T PF00668_consen 216 PSYSPSRISFSLSSELSKRLKEFAKQYGVTPFAVLLAAFALALSRLTGQ---------------------DDVVIGTPVS 274 (301)
T ss_dssp BEEBEEEEEEE--HHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTT---------------------SEEEEEEEE-
T ss_pred cccccccccccccchhhhhhhhhhhhhcccchhhhhhhhhhhhhhcccc---------------------ceeeeccccc
Confidence 000001112233 3568888999999999999999999999998632 2799999999
Q ss_pred ecCC--CChhHHHHHhhcCCCCCCCceEEEEEeeecc
Q 041931 323 LRPS--AGIQELANMLKKGSKAKWGNQIGYIIFPFTI 357 (491)
Q Consensus 323 lR~~--~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~ 357 (491)
.|.. .+. ....|++++.+++.+..
T Consensus 275 ~R~~~~~~~-----------~~~vG~~~~~~P~~i~~ 300 (301)
T PF00668_consen 275 GRPRSGPGF-----------SNTVGPFVNTLPVRIDV 300 (301)
T ss_dssp --TTTSCGG-----------GGS-SS--EEEEEEEE-
T ss_pred CCCCCCcCh-----------hhCeeeEeEEEEEEEEc
Confidence 9998 432 46799999988887765
No 12
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.80 E-value=7.6e-17 Score=190.28 Aligned_cols=392 Identities=13% Similarity=0.120 Sum_probs=236.2
Q ss_pred CCCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceE-EEeeecC
Q 041931 24 EENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLK-WVPTKVN 96 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~-w~~~~~d 96 (491)
+...|||++|+.+| .+....|++ ..+++.|.+|.++|++++...+.+|+.||+++... .|.+. ++.+..+
T Consensus 5 ~~~~Pls~~Q~~lw~~~~~~~~~~~yn~~~~~~l~g~ld~~~l~~Al~~lv~rh~~LRt~f~~~---~g~~~q~v~~~~~ 81 (1296)
T PRK10252 5 SQHLPLVAAQPGIWMAEKLSPLPSAWSVAHYVELTGELDAPLLARAVVAGLAEADTLRMRFTED---NGEVWQWVDPALT 81 (1296)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCCCceeeeEEEEEeCCCCHHHHHHHHHHHHHhccceEEEEEcC---CCeEEEEECCCCC
Confidence 34579999999554 466666755 77899999999999999999999999999999874 45553 3333322
Q ss_pred CCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCCC--CceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHH
Q 041931 97 LDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMSM--PMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLAC 174 (491)
Q Consensus 97 ~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~~--PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l 174 (491)
+.. +.+.++... +..++++++++.+...+|||+++ |+|++.+++. +++++.+++.+||+++||+|+..++.++
T Consensus 82 ~~~-~~~~d~~~~--~~~~~~~~~~~~~~~~~~fdl~~~~pl~r~~l~~~--~~~~~~l~~~~HHii~DG~S~~~l~~el 156 (1296)
T PRK10252 82 FPL-PEIIDLRTQ--PDPHAAAQALMQADLQQDLRVDSGKPLVFHQLIQL--GDNRWYWYQRYHHLLVDGFSFPAITRRI 156 (1296)
T ss_pred CCc-CceeecCCC--CCHHHHHHHHHHHHhcCCcCCCCCCCCeEEEEEEE--cCCEEEEEEecCceeEccccHHHHHHHH
Confidence 221 112222211 11455677888888899999974 9999999985 3578999999999999999999999988
Q ss_pred cccCCCC--CCCCCCCCCCCCCCCCCCCCCchHHH--------HHHHHHHHHHHHHHHHHHHHhccccCCCCCCcc--CC
Q 041931 175 CRKVSDP--NEVPTIPSVTKKIDSNGHSKGFWPYL--------LFKLWLFWNTLVDVVMFIATALMFVRDTKTPLK--GE 242 (491)
Q Consensus 175 ~~~~~~p--~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 242 (491)
...|..- ...+..+... + ...+..+. ......+|+.. +.. . .+...+. .+
T Consensus 157 ~~~Y~~~~~g~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~yW~~~------L~~----~-~~~~~l~~~~~ 218 (1296)
T PRK10252 157 AAIYCAWLRGEPTPASPFT------P-FADVVEEYQRYRASEAWQRDAAFWAEQ------RRQ----L-PPPASLSPAPL 218 (1296)
T ss_pred HHHHHHHhcCCCCCCCCCc------c-HHHHHHHHHHHhhCchhhHHHHHHHHH------hcC----C-CCcccCCCCCC
Confidence 7765311 0011011000 0 00000000 01112234321 111 0 0111111 00
Q ss_pred CC--CCCCCeEEEEeeechHHHHHH-HHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEE
Q 041931 243 LG--NGCLPRRFVHRSVSLDDVKLV-RNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATF 319 (491)
Q Consensus 243 ~~--~~~~~r~~~~~~~~l~~vk~i-a~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~v 319 (491)
.+ ......++ ...++.+...++ +.+.|+|.+.+++|+++..|.+|... ..+.+++
T Consensus 219 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~l~aa~~~lL~r~sg~---------------------~dv~ig~ 276 (1296)
T PRK10252 219 PGRSASADILRL-KLEFTDGAFRQLAAQASGVQRPDLALALVALWLGRLCGR---------------------MDYAAGF 276 (1296)
T ss_pred CCccCCCcceee-eeecCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCC---------------------CceEEEE
Confidence 00 00001111 123343333333 23568999999999999999998632 2799999
Q ss_pred EeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHh
Q 041931 320 FMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNK 399 (491)
Q Consensus 320 PVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~ 399 (491)
|++.|...+. ...+|.+++.+++.+..+...++.+.++++++.+....++....+... . +.+..
T Consensus 277 p~sgR~~~~~-----------~~~vG~fvntlplr~~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~i-~----~~l~~ 340 (1296)
T PRK10252 277 IFMRRLGSAA-----------LTATGPVLNVLPLRVHIAAQETLPELATRLAAQLKKMRRHQRYDAEQI-V----RDSGR 340 (1296)
T ss_pred EecCCCchhh-----------hcCCCcccceEEEEEecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHHH-H----HHhcC
Confidence 9999976432 346899999888888876566899999999999988887776644411 1 21111
Q ss_pred hc--CCCCcceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEE-EeCCEEEEEEEecCCCCCC--HHHHHHHH
Q 041931 400 AA--SFPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVV-SYANKMTFVLSVDDGLIPD--PHKLCDDL 474 (491)
Q Consensus 400 ~~--~~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~-sy~~~l~~~v~~d~~~~~d--~~~l~~~~ 474 (491)
.. ..+...-+.+.|... ...+.|......... ......+.+.+. .-++.+.+.+.++.+++.. .+.+.+.|
T Consensus 341 ~~~~~~lf~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~dl~l~~~~~~~~~l~~~~~y~~~~f~~~~i~~l~~~~ 416 (1296)
T PRK10252 341 AAGDEPLFGPVLNIKVFDY---QLDFPGVQAQTHTLA-TGPVNDLELALFPDEHGGLSIEILANPQRYDEATLIAHAERL 416 (1296)
T ss_pred ccCCCCceeEEEEeeeccc---ccCcCCccceeeecC-CCccCCeEEEEEECCCCcEEEEEEEChhhCCHHHHHHHHHHH
Confidence 11 123333333434331 233444433222111 122235677665 3468899999999988852 55566666
Q ss_pred HHHHHHHHH
Q 041931 475 EESLHLIKT 483 (491)
Q Consensus 475 ~~~l~~l~~ 483 (491)
...|..+.+
T Consensus 417 ~~ll~~~~~ 425 (1296)
T PRK10252 417 KALIAQFAA 425 (1296)
T ss_pred HHHHHHHHh
Confidence 666666543
No 13
>PRK05691 peptide synthase; Validated
Probab=99.79 E-value=3.6e-17 Score=209.92 Aligned_cols=400 Identities=13% Similarity=0.124 Sum_probs=246.0
Q ss_pred CCCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecC
Q 041931 24 EENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVN 96 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d 96 (491)
+...|||+.|+.+| .+....|+. .+++++|.+|.++|++++...+.+|+.||++++.. .+.++.+- ...+
T Consensus 1726 ~~~~pls~~Q~~l~~~~~~~~~~~~Yn~~~~~~l~g~ld~~~L~~A~~~lv~rH~~LRT~f~~~---~~~~~q~v~~~~~ 1802 (4334)
T PRK05691 1726 SQPVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLSGVLDVDRFEAALQALILRHETLRTTFPSV---DGVPVQQVAEDSG 1802 (4334)
T ss_pred ccCCCCCHHHHhHHHhhhccCCCcccceeeeehccCCCCHHHHHHHHHHHHHhCCcceEEEEcc---CCeEEEEECCCCC
Confidence 44579999999554 455556654 67899999999999999999999999999999864 45554332 2222
Q ss_pred CCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHc
Q 041931 97 LDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACC 175 (491)
Q Consensus 97 ~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~ 175 (491)
+. +.+.++.........+.+..++.+...+|||+. .|++++.+++. +++++.+++.+||++.||+|+..++.++.
T Consensus 1803 ~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HHii~DG~S~~ll~~el~ 1878 (4334)
T PRK05691 1803 LR--MDWQDFSALPADARQQRLQQLADSEAHQPFDLERGPLLRACLVKA--AEREHYFVLTLHHIVTEGWAMDIFARELG 1878 (4334)
T ss_pred CC--eeEeeccCCChHhHHHHHHHHHHHHHhcCCCCCCCceeEEEEEEe--CCCcEEEEEecchhhhhhhhHHHHHHHHH
Confidence 22 222222111100023456777888888999997 59999999985 35788999999999999999999999988
Q ss_pred ccCCC--CCCCCCCCCCCCCCCCCCCCCCchHHHHH--------HHHHHHHHHHHHHHHHHHhccccCCCCCCcc--C--
Q 041931 176 RKVSD--PNEVPTIPSVTKKIDSNGHSKGFWPYLLF--------KLWLFWNTLVDVVMFIATALMFVRDTKTPLK--G-- 241 (491)
Q Consensus 176 ~~~~~--p~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 241 (491)
..|.. ....+..+.... ....|..+... ....+|... +.. ..+...+. .
T Consensus 1879 ~~Y~~~~~~~~~~~~~~~~------~y~dy~~~~~~~l~~~~~~~~~~yW~~~------L~~-----~~~~~~lp~~~~~ 1941 (4334)
T PRK05691 1879 ALYEAFLDDRESPLEPLPV------QYLDYSVWQRQWLESGERQRQLDYWKAQ------LGN-----EHPLLELPADRPR 1941 (4334)
T ss_pred HHHHHHhcCCCCCCCCCCC------CHHHHHHHHHHHhcChhhHHHHHHHHHH------hcC-----CCCcccCCCCCCC
Confidence 76631 011111111100 00011111000 011233321 111 00111111 0
Q ss_pred CCCCCCCCeEE--EEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEE
Q 041931 242 ELGNGCLPRRF--VHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATF 319 (491)
Q Consensus 242 ~~~~~~~~r~~--~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~v 319 (491)
+.........+ .......+++++.|+++|+|++.+++||++..|++|... +++.+++
T Consensus 1942 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~vT~~~~l~aA~a~lL~r~sg~---------------------~dvv~G~ 2000 (4334)
T PRK05691 1942 PPVQSHRGELYRFDLSPELAARVRAFNAQRGLTLFMTMTATLAALLYRYSGQ---------------------RDLRIGA 2000 (4334)
T ss_pred CcccCcCceEEEEECCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCC---------------------CCeEEEe
Confidence 00000001111 112223478889999999999999999999999999632 2799999
Q ss_pred EeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHh
Q 041931 320 FMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNK 399 (491)
Q Consensus 320 PVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~ 399 (491)
|++.|...+. +..+|.+++.+++++..+...++.+.++++++++.....+....+.. +.+.+. . .+
T Consensus 2001 ~vsgR~~~~~-----------~~~vG~fvntlPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~-~-~r 2066 (4334)
T PRK05691 2001 PVANRIRPES-----------EGLIGAFLNTQVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVEALQ-P-PR 2066 (4334)
T ss_pred cccCCCchhh-----------hcceeeeeeeeeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhc-c-cc
Confidence 9999976432 34688888888888887656689999999999988877766654432 112110 0 11
Q ss_pred h--cCCCCcceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCC--HHHHHHHHH
Q 041931 400 A--ASFPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPD--PHKLCDDLE 475 (491)
Q Consensus 400 ~--~~~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d--~~~l~~~~~ 475 (491)
. ..++++..+.+.|.+... ...+.|..+.............+.+.+...++.+.+.+.++.+++.. .+.+.+.|.
T Consensus 2067 ~~~~~plf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~ 2145 (4334)
T PRK05691 2067 SAAYNPLFQVMCNVQRWEFQQ-SRQLAGMTVEYLVNDARATKFDLNLEVTDLDGRLGCCLTYSRDLFDEPRIARMAEHWQ 2145 (4334)
T ss_pred ccCCCCceEEEEEeecccccc-ccCCCCceeEeecccCCccccceEEEEEecCCcEEEEEEECcccCCHHHHHHHHHHHH
Confidence 1 113334445555543211 22345555543322112334568888887889999999999998853 566777777
Q ss_pred HHHHHHHH
Q 041931 476 ESLHLIKT 483 (491)
Q Consensus 476 ~~l~~l~~ 483 (491)
..|+.+.+
T Consensus 2146 ~~l~~~~~ 2153 (4334)
T PRK05691 2146 NLLEALLG 2153 (4334)
T ss_pred HHHHHHHh
Confidence 77776654
No 14
>PRK05691 peptide synthase; Validated
Probab=99.75 E-value=5.1e-16 Score=199.48 Aligned_cols=396 Identities=14% Similarity=0.130 Sum_probs=238.4
Q ss_pred CCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCC
Q 041931 25 ENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNL 97 (491)
Q Consensus 25 ~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~ 97 (491)
...|+|++|+.+| .+....|.+ ..+++.|.+|.++|++++...+.+||.||+++... .+.++.+- ...++
T Consensus 674 ~~~plS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~---~~~~~q~v~~~~~~ 750 (4334)
T PRK05691 674 QALPQSLAQNRLWLLWQLDPQSAAYNIPGGLHLRGELDEAALRASFQRLVERHESLRTRFYER---DGVALQRIDAQGEF 750 (4334)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcceeccEEEEEeccCCHHHHHHHHHHHHHHhhhhcEEEEcc---CCeEEEEECCCCCC
Confidence 3579999999654 455566655 77899999999999999999999999999999863 45554332 22222
Q ss_pred CcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcc
Q 041931 98 DDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 98 ~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
.. ...++.........+.+++++.+...+|||+. .|++|+++++. +++++.+++.+||+++||+|+..++.++..
T Consensus 751 ~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~R~~l~~~--~~~~~~l~l~~HHii~DG~S~~ll~~el~~ 826 (4334)
T PRK05691 751 AL--QRIDLSDLPEAEREARAAQIREEEARQPFDLEKGPLLRVTLVRL--DDEEHQLLVTLHHIVADGWSLNILLDEFSR 826 (4334)
T ss_pred cc--eEEeCCCCChHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEE--cCCeEEEEEeeCceeeccchHHHHHHHHHH
Confidence 21 12222111100023456677788889999997 59999999985 257899999999999999999999999887
Q ss_pred cCCCC--CCCCCCCCCCCCCCCCCCCCCchHHHHH--------HHHHHHHHHHHHHHHHHHhccccCCCCCCc--cCCC-
Q 041931 177 KVSDP--NEVPTIPSVTKKIDSNGHSKGFWPYLLF--------KLWLFWNTLVDVVMFIATALMFVRDTKTPL--KGEL- 243 (491)
Q Consensus 177 ~~~~p--~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 243 (491)
.|..- ...+.++... .....|..+... ....+|... +.. ..|..++ ..+.
T Consensus 827 ~Y~~~~~g~~~~l~~~~------~~y~dy~~~~~~~l~~~~~~~~~~yW~~~------L~~-----~~~~~~l~~~~~~~ 889 (4334)
T PRK05691 827 LYAAACQGQTAELAPLP------LGYADYGAWQRQWLAQGEAARQLAYWKAQ------LGD-----EQPVLELATDHPRS 889 (4334)
T ss_pred HHHHHhcCCCCCCCCCC------CCHHHHHHHHHHHhcChhHHHHHHHHHHH------hCC-----CCCccCCCCCCCCC
Confidence 66321 0111111110 000111111100 111233321 111 0111111 1110
Q ss_pred C-CCCCCeEEEEeeec---hHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEE
Q 041931 244 G-NGCLPRRFVHRSVS---LDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATF 319 (491)
Q Consensus 244 ~-~~~~~r~~~~~~~~---l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~v 319 (491)
. ......+. ...++ .+.++++|+++|+|++.+++||++..|++|... +++.+++
T Consensus 890 ~~~~~~~~~~-~~~l~~~~~~~L~~~a~~~gvT~~~vl~aa~allL~rytg~---------------------~dv~~G~ 947 (4334)
T PRK05691 890 ARQAHSAARY-SLRVDASLSEALRGLAQAHQATLFMVLLAAFQALLHRYSGQ---------------------GDIRIGV 947 (4334)
T ss_pred ccCCcCceEE-EEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCC---------------------CCEEEEe
Confidence 0 00001111 12233 467899999999999999999999999999632 2799999
Q ss_pred EeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHh
Q 041931 320 FMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNK 399 (491)
Q Consensus 320 PVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~ 399 (491)
|++.|...+. +..+|-+++.+++.+..+...++.+.|+++++.......+....+. .+ .+.+..
T Consensus 948 ~~sgR~~~~~-----------~~~vG~fintlplr~~~~~~~t~~~ll~~v~~~~~~a~~h~~~p~~----~i-~~~l~~ 1011 (4334)
T PRK05691 948 PNANRPRLET-----------QGLVGFFINTQVLRAQLDGRLPFTALLAQVRQATLGAQAHQDLPFE----QL-VEALPQ 1011 (4334)
T ss_pred cccCCCchhh-----------hcceeeeeeeeeEEEecCCCCCHHHHHHHHHHHHHHHHhhccCCHH----HH-HHHhCc
Confidence 9999975432 2457888888888888775668899999999988887766655433 11 121111
Q ss_pred hcC-CCCcceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEE-eCCEEEEEEEecCCCCCC--HHHHHHHHH
Q 041931 400 AAS-FPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVS-YANKMTFVLSVDDGLIPD--PHKLCDDLE 475 (491)
Q Consensus 400 ~~~-~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~s-y~~~l~~~v~~d~~~~~d--~~~l~~~~~ 475 (491)
... .+++..+++.|.+... ...+.|................+.+.+.. .++.+.+.+.++.+++.. .+.+.+.|.
T Consensus 1012 ~~~~~lf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~ 1090 (4334)
T PRK05691 1012 AREQGLFQVMFNHQQRDLSA-LRRLPGLLAEELPWHSREAKFDLQLHSEEDRNGRLTLSFDYAAELFDAATIERLAEHFL 1090 (4334)
T ss_pred cCCCCceeEEEEcccCCccc-cccCCCceeeeecccCCcccceEEEEEEECCCCcEEEEEEEchhhCCHHHHHHHHHHHH
Confidence 111 2333334444432111 11233433333211111223445655543 356799999999998853 566777777
Q ss_pred HHHHHHHH
Q 041931 476 ESLHLIKT 483 (491)
Q Consensus 476 ~~l~~l~~ 483 (491)
..|+++.+
T Consensus 1091 ~~l~~~~~ 1098 (4334)
T PRK05691 1091 ALLEQVCE 1098 (4334)
T ss_pred HHHHHHHh
Confidence 77776654
No 15
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=98.36 E-value=6.7e-05 Score=78.60 Aligned_cols=268 Identities=13% Similarity=0.061 Sum_probs=133.5
Q ss_pred CCccCChhhhhccCCCCceEEEEEEEeCCC----CCHHHHHHHHHHHHhhccCCccceecccccCCceEEE---------
Q 041931 25 ENQPLSPMARMFHEPESNVYIVTMIGFKSK----INPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWV--------- 91 (491)
Q Consensus 25 ~~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~----ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~--------- 91 (491)
+..+||.+|+.+ ..++..+.+|+.... -..+.|+++|.+.+..++.|.=|++.. ..|+++..
T Consensus 31 ~~~~LS~lD~~~---~~~~~~~~fy~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRL~~~--~~g~~~i~c~~~Gv~fv 105 (436)
T PLN02481 31 GLYFLSNLDQNI---AVIVRTVYCFKSEERGSNEDPVDVIKKALSKVLVHYYPLAGRLTIS--SEGKLIVDCTGEGVVFV 105 (436)
T ss_pred CceecCccccCc---ceeeeEEEEECCCCcccccCHHHHHHHHHHHHhccccCCCCeeeeC--CCCcEEEEEcCCCeEEE
Confidence 367788888743 123334455654321 135889999999999999888888754 23333322
Q ss_pred e--eecCCCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCC--CC-CCCceEEEEecccCCCCeeEEEEEeccccccccc
Q 041931 92 P--TKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGI--KM-SMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTS 166 (491)
Q Consensus 92 ~--~~~d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~--d~-~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s 166 (491)
+ .+.+++++.. ...+ +...+..++ ...|. +. ..|+.-+.+.. +. .|+.+|-+.+||+++||.|
T Consensus 106 ea~~d~~l~~l~~------~~~p-~~~~~~~l~---~~~~~~~~~~~~Pll~vQvT~-F~-~GG~~lg~~~~H~v~Dg~g 173 (436)
T PLN02481 106 EAEANCSIEEIGD------ITKP-DPETLGKLV---YDVPGAKNILEIPPLTAQVTR-FK-CGGFVLGLCMNHCMFDGIG 173 (436)
T ss_pred EEEecCcHHHhcc------ccCC-CCHHHHHhC---CCCCCcccccccceeeeccce-Ee-cCcEEEEEEeccccccHHH
Confidence 1 1111111110 0000 112232222 11121 11 24665555432 22 4789999999999999999
Q ss_pred HHHHHHHHcccCCCCCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccCCC
Q 041931 167 LMSLLLACCRKVSDPNEVPTIPSVTKKIDS---NGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGEL 243 (491)
Q Consensus 167 ~~~l~~~l~~~~~~p~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (491)
+..++....+...... ....|... +... .+....+ .+... .. ....+......+.
T Consensus 174 ~~~fl~~WA~~~rg~~-~~~~p~~d-r~~l~~~~pp~~~~----------~~~~~-------~~---~~~~~~~~~~~~~ 231 (436)
T PLN02481 174 AMEFVNSWGETARGLP-LSVPPFLD-RSILRARNPPKIEF----------PHQEF-------AE---IEDVSGTSKLYDD 231 (436)
T ss_pred HHHHHHHHHHHhcCCC-CCCCCCcC-cccCCCCCCCCCCc----------Ccccc-------cc---ccCCccccccccc
Confidence 9999987655432111 11011111 1000 0000000 00000 00 0000000000000
Q ss_pred CCCCCCeEEEEeeechHHHHHHHHHc----CCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEE
Q 041931 244 GNGCLPRRFVHRSVSLDDVKLVRNAM----NTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATF 319 (491)
Q Consensus 244 ~~~~~~r~~~~~~~~l~~vk~ia~~~----g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~v 319 (491)
. ....+.|....-.++++|+.|... .+|-+|++.|.+-.++.+- .+. .++ ....+..
T Consensus 232 ~-~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~S~~dal~A~iW~~~~rA---~~~--------------~~~-~~~~l~~ 292 (436)
T PLN02481 232 E-ELVYKSFCFDPEKLEKLKSMALEDGVIKKCSTFEALTAFVWRARTKA---LKM--------------LPD-QQTKLLF 292 (436)
T ss_pred c-CceEEEEEECHHHHHHHHHhcccccCCCCcChHHHHHHHHHHHHHhc---cCC--------------CCC-CeEEEEE
Confidence 1 011344555555667777666433 2789999999877666543 221 123 3788999
Q ss_pred EeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccC
Q 041931 320 FMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIA 358 (491)
Q Consensus 320 PVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 358 (491)
+||+|...+.. + +....||.+......++.+
T Consensus 293 ~vd~R~rl~Pp-l-------p~~Y~GN~v~~~~~~~~~~ 323 (436)
T PLN02481 293 AVDGRSRFNPP-L-------PKGYFGNGIVLTNALTTAG 323 (436)
T ss_pred EEcCccCCCCC-C-------CCCceeeeeeeccccccHH
Confidence 99999874311 1 3556899886655555543
No 16
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=98.33 E-value=0.00013 Score=76.24 Aligned_cols=140 Identities=15% Similarity=0.110 Sum_probs=80.4
Q ss_pred CCccCChhhhhccCCCCceEEEEEEEeCC---CCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEeeecCCCcce
Q 041931 25 ENQPLSPMARMFHEPESNVYIVTMIGFKS---KINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVPTKVNLDDHV 101 (491)
Q Consensus 25 ~~~~Ls~~d~~~~~~~~~v~~~~~~~~~~---~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~~~~d~~~hv 101 (491)
+..+||..|+.+ +..++..+.+|.... ..|.+.|+++|.+.+..+..|.-|+... ..|+++..-.+ + =+
T Consensus 20 ~~~~LS~lD~~~--~~~~~~~v~fY~~~~~~~~~~~~~Lk~sLs~~L~~~yplaGRl~~~--~~g~~~i~c~~-~---Gv 91 (431)
T PLN02663 20 RGLWNSNVDLVV--PRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLRRD--EDGRIEIDCNA-E---GV 91 (431)
T ss_pred CcccCChhhccc--ccccccEEEEEcCCCCCCccCHHHHHHHHHHHHhhccccceeeeEC--CCCCEEEEECC-C---Cc
Confidence 467788888754 344555555666432 2467899999999999888888888764 23444321111 0 01
Q ss_pred eeecCCCCCCCCcHHHHHHH-----HHHhhcC-CCC---CCCCceEEEEecccCCCCeeEEEEEecccccccccHHHHHH
Q 041931 102 IVPNLEPKLIDSPDKFVEDY-----TSSLSQT-GIK---MSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLL 172 (491)
Q Consensus 102 ~~~~l~~~~~~~~~~~l~~~-----i~~~~~~-p~d---~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~ 172 (491)
.++.-.... +-+++.++ ..++... +.. .+.|+..+.+-. +. .|+.+|-+.+||+++||.|+..++.
T Consensus 92 ~fv~A~~~~---~l~~~~~~~~~~~~~~l~P~~~~~~~~~~~P~l~vQvt~-F~-cGG~~lg~~~~H~v~Dg~g~~~fl~ 166 (431)
T PLN02663 92 LFVEADTPS---VIDDFGDFAPTLELRQLIPTVDYSGGISSYPLLVLQVTH-FK-CGGVSLGVGMQHHAADGFSGLHFIN 166 (431)
T ss_pred eEEEEecCC---CHHHhhccCCCHHHHhhcCCCCCccccccCceEEEEEEE-ec-cCCEEEEEEecccccchHHHHHHHH
Confidence 110000000 11111111 1122211 111 235877777654 22 4789999999999999999999998
Q ss_pred HHccc
Q 041931 173 ACCRK 177 (491)
Q Consensus 173 ~l~~~ 177 (491)
.....
T Consensus 167 awa~~ 171 (431)
T PLN02663 167 TWSDM 171 (431)
T ss_pred HHHHH
Confidence 75543
No 17
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=98.16 E-value=3.6e-05 Score=80.46 Aligned_cols=268 Identities=16% Similarity=0.202 Sum_probs=126.8
Q ss_pred CccCChhhhhccCCCCceEEEEEEEeCCCCC----HHHHHHHHHHHHhhccCCccceecccccCCce---------EEEe
Q 041931 26 NQPLSPMARMFHEPESNVYIVTMIGFKSKIN----PEVVKANLEHSLLKHRRFSSLQVVDEKIEGGL---------KWVP 92 (491)
Q Consensus 26 ~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~ld----~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p---------~w~~ 92 (491)
..+||++|. ++....++..+..|......+ .+.|+++|.+.+..+|-|-=|+ ..+ .+++ .|+.
T Consensus 21 ~~~LS~lD~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~~lAGrl-~~~--~~~~~i~c~d~Gv~f~~ 96 (432)
T PF02458_consen 21 TLPLSNLDL-QLMPPYYVPVLLFYRPPSSSDDSDIVDNLKESLSKTLVHYYPLAGRL-RDP--DGRLEIDCNDDGVEFVE 96 (432)
T ss_dssp EEE--HHHH-HCCGCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHTTSGGGGSEE-ESS--CTTTEEEECTTTEEEEE
T ss_pred cccCchhhc-CcccccEEEEEEEecCccccccchHHHHHHHHHHHhHhhCcccCcEE-ccc--ccceEEEEecCCCEEEE
Confidence 688999996 333344555556676654432 4679999999999999888888 432 2222 2222
Q ss_pred eecCCCcceeeecCCCCCCCCcHHHHHHHHHHhhc-CCCCC---CCCceEEEEecccCCCCeeEEEEEecccccccccHH
Q 041931 93 TKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQ-TGIKM---SMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLM 168 (491)
Q Consensus 93 ~~~d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~-~p~d~---~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~ 168 (491)
.+.|.. + .++..... ..... ..+.. .++.. +.|+..+.+-. +. +|+.+|.+.+||+++||.|+.
T Consensus 97 a~~~~~--l--~~~~~~~~--~~~~~----~~l~p~~~~~~~~~~~Pll~vQvt~-f~-~GG~~lg~~~~H~v~Dg~~~~ 164 (432)
T PF02458_consen 97 AEADGT--L--DDLLDLEP--PSEFL----RDLVPQLPVSSEGEDAPLLAVQVTR-FK-CGGLALGVSFHHAVADGTGFS 164 (432)
T ss_dssp EEESS---H--HHHCSSSC--CGGGG----GGGSSS-SSSEEETTEBSEEEEEEE-ET-TTEEEEEEEEETTT--HHHHH
T ss_pred Eecccc--e--eecccccc--chHHH----HHHhhhcccCCcccccceeEeeeee-ec-ccceeeeeeceeccCcccchh
Confidence 111111 0 01100000 01111 11111 12222 24777777643 22 478999999999999999999
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccCCCCCCCC
Q 041931 169 SLLLACCRKVSDPNEVPTIPSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGCL 248 (491)
Q Consensus 169 ~l~~~l~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (491)
.|+......+.........|... +..... ...+.. . . ........+.... .......
T Consensus 165 ~fl~~wa~~~rg~~~~~~~p~~~-r~~~~~------~~~p~~------------~-~-~~~~~~~~~~~~~--~~~~~~~ 221 (432)
T PF02458_consen 165 QFLKAWAEICRGGSPPSPPPVFD-RSLLLP------PNPPSV------------S-F-PPSEFEPFPPEPA--PPSSKCV 221 (432)
T ss_dssp HHHHHHHHHHHTTCHHHHHHCHS-STTSS-------STTHHH------------G-C-TCSCHTTC--TTS-----SSEE
T ss_pred HHHHHHHhhhcCCcccccccccc-hHHhhh------ccCccc------------c-c-ccccccccccccc--ccccccc
Confidence 99987554321110000000000 000000 000000 0 0 0000000000000 0010011
Q ss_pred CeEEEEeeechHHHHHHHHHc------C-CcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEe
Q 041931 249 PRRFVHRSVSLDDVKLVRNAM------N-TTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFM 321 (491)
Q Consensus 249 ~r~~~~~~~~l~~vk~ia~~~------g-~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPV 321 (491)
.+.+....++.+.+++.+.+. . .|-||++.|.+-.++.+-.... +. ...++.++|
T Consensus 222 ~~~~~f~~~~~~~l~~lk~~~~~~~~~~~~St~d~l~A~lWr~~~rar~~~-----------------~~-~~~~l~~~v 283 (432)
T PF02458_consen 222 SKTFVFSKLSIEKLKKLKSEALSSSSGKPVSTFDALTALLWRCITRARGLP-----------------SD-ETSRLSFAV 283 (432)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHSTTTSTT-S-HHHHHHHHHHHHHHHHHCHT-----------------TT-TCEEEEEEE
T ss_pred cceeeecccHHHHHHHHhhccccccCCCCCCeeEEEEEehhhhhccccccc-----------------cc-ccccccccc
Confidence 223333445688888776542 1 2889999988877776643221 12 258999999
Q ss_pred eecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccC
Q 041931 322 NLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIA 358 (491)
Q Consensus 322 slR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 358 (491)
|+|...+.+ + ++...||.+....+.....
T Consensus 284 d~R~rl~pp-l-------p~~Y~GN~~~~~~~~~~~~ 312 (432)
T PF02458_consen 284 DCRKRLNPP-L-------PEGYFGNAVFFAFASATAG 312 (432)
T ss_dssp ETHHHSSS-----------TTB-S--EEEEEEEEEHH
T ss_pred ccCCCcCCC-c-------ceeecCceEeecccccchh
Confidence 999864311 1 4567999998888877764
No 18
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=98.06 E-value=0.00056 Score=71.92 Aligned_cols=137 Identities=17% Similarity=0.126 Sum_probs=76.5
Q ss_pred CCccCChhhhhccCCCCceEEEEEEEeCC--C-CC-HHHHHHHHHHHHhhccCCccceecccccCCce---------EEE
Q 041931 25 ENQPLSPMARMFHEPESNVYIVTMIGFKS--K-IN-PEVVKANLEHSLLKHRRFSSLQVVDEKIEGGL---------KWV 91 (491)
Q Consensus 25 ~~~~Ls~~d~~~~~~~~~v~~~~~~~~~~--~-ld-~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p---------~w~ 91 (491)
+..+||.+|+.+ +..++..+..|.-+. . .+ .+.|+++|.+.+..|+-|.=|+... ..|++ .++
T Consensus 20 ~~~~LS~lD~~~--~~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~--~~g~~~i~c~~~Gv~fv 95 (447)
T PLN03157 20 GRRSLSEWDQVG--TITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWI--GGGRLELECNAMGVLLI 95 (447)
T ss_pred CccCCChhhhcc--ccccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEc--CCCcEEEEECCCCeEEE
Confidence 356788888854 344555555564321 1 12 5789999999999888787777643 12222 222
Q ss_pred eee--cCCCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCCceEEEEecccCCCCeeEEEEEecccccccccHH
Q 041931 92 PTK--VNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIK-MSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLM 168 (491)
Q Consensus 92 ~~~--~d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d-~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~ 168 (491)
..+ .++++... .. ...++.+++-..-. .-+ .+.|+..+.+-. +. .|+.+|.+.+||+++||.|+.
T Consensus 96 eA~~~~~l~~~~~------~~---~~~~~~~l~P~~~~-~~~~~~~Pll~vQvT~-F~-cGG~~lg~~~~H~v~Dg~~~~ 163 (447)
T PLN03157 96 EAESEAKLDDFGD------FS---PTPEFEYLIPSVDY-TKPIHELPLLLVQLTK-FS-CGGISLGLGISHAVADGQSAL 163 (447)
T ss_pred EEEeCCcHHHhhc------cC---CCHHHHhhcCCCCc-ccccccCceEEEEEEE-ec-CCCEEEEEEeeccccchHhHH
Confidence 211 11111100 00 11233333211100 001 125776665532 22 478999999999999999999
Q ss_pred HHHHHHccc
Q 041931 169 SLLLACCRK 177 (491)
Q Consensus 169 ~l~~~l~~~ 177 (491)
.++....+.
T Consensus 164 ~fl~aWA~~ 172 (447)
T PLN03157 164 HFISEWARI 172 (447)
T ss_pred HHHHHHHHH
Confidence 999865543
No 19
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=97.78 E-value=0.0035 Score=65.84 Aligned_cols=263 Identities=11% Similarity=0.098 Sum_probs=132.0
Q ss_pred ccCChhhhhccCCCCceEEEEEEEeCCC--C---C-HHHHHHHHHHHHhhccCCccceecccc---cCCceEEEe--eec
Q 041931 27 QPLSPMARMFHEPESNVYIVTMIGFKSK--I---N-PEVVKANLEHSLLKHRRFSSLQVVDEK---IEGGLKWVP--TKV 95 (491)
Q Consensus 27 ~~Ls~~d~~~~~~~~~v~~~~~~~~~~~--l---d-~~~l~~~l~~~~~~~p~lr~~v~~~~~---~~~~p~w~~--~~~ 95 (491)
.+||.+|+.. +..++..+..|..... . + .+.|+++|.+.+..++-|-=|+..... ...+-.++. .+.
T Consensus 24 ~~LS~lD~~~--~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~i~cn~~Gv~fveA~~~~ 101 (444)
T PLN00140 24 FKLSLLDQLT--PTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKG 101 (444)
T ss_pred CCCChHHhcc--cccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCccccCCceeEccCCCceEEEEEecC
Confidence 3588888743 3344555556665321 1 1 378999999999888877767664210 122334444 333
Q ss_pred CCCcceeeecCCCCCCCCcHHHHHHHHHHhhcC-CC----CC-CCCceEEEEecccCCCCeeEEEEEecccccccccHHH
Q 041931 96 NLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQT-GI----KM-SMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMS 169 (491)
Q Consensus 96 d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~-p~----d~-~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~ 169 (491)
++++.+. .. +...++++ ... +. +. ..|+..+-+-. +. .|+.+|-+.+||+++||.|+..
T Consensus 102 ~l~d~l~-----~~----~~~~~~~l----~p~~~~~~~~~~~~~Pll~vQvT~-F~-cGG~~lG~~~~H~v~Dg~s~~~ 166 (444)
T PLN00140 102 SLSDFLK-----HP----QLELLNKF----LPCQPFSYESDPEAIPQVAIQVNT-FD-CGGIALGLCFSHKIIDAATASA 166 (444)
T ss_pred cHHHhcC-----CC----CHHHHHhh----CCCCcccccCCccCCceEEEEEEE-ec-cCcEEEEeeeceEcccHHHHHH
Confidence 3332211 01 22233333 221 22 11 24766555433 22 3789999999999999999999
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCCCCC-CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccCCCCCCCC
Q 041931 170 LLLACCRKVSDPNEVPTIPSVTKKIDS-NGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGCL 248 (491)
Q Consensus 170 l~~~l~~~~~~p~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (491)
|+....+...........|... +... .+....+ .... . . .. +.... ... ..-
T Consensus 167 Fl~~WA~~~rg~~~~~~~P~~d-r~~~~~p~~~~~----~~~~---~-----------~---~~--~~~~~--~~~-~~v 219 (444)
T PLN00140 167 FLDSWAANTRGHYSEVINPDLF-EASSFFPPLNSF----PVQF---L-----------L---LM--EENWF--FKE-NYI 219 (444)
T ss_pred HHHHHHHHhcCCCCCCCCcccc-cccccCCCCCcc----cccc---c-----------c---cc--ccccc--ccC-ceE
Confidence 9987654332111111111111 1000 0000000 0000 0 0 00 00000 000 011
Q ss_pred CeEEEEeeechHHHHHHHHHc---CCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecC
Q 041931 249 PRRFVHRSVSLDDVKLVRNAM---NTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRP 325 (491)
Q Consensus 249 ~r~~~~~~~~l~~vk~ia~~~---g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~ 325 (491)
.++|....-.++.+|+.+... .+|-+|++.|.+-.++.+-...... .+ ....+.++||+|+
T Consensus 220 ~~~f~fs~~~I~~LK~~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~~~---------------~~-~~~~~~~~vn~R~ 283 (444)
T PLN00140 220 TKRFVFDAKAIATLRAKAKSKRVPNPSRIETLSCFIWKCCTAASRSISA---------------AP-RPSISVHAVNIRQ 283 (444)
T ss_pred EEEEEECHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhhhccC---------------CC-CceEEEEEEeccc
Confidence 334444555566666665432 4788999988777776554322111 11 2578889999998
Q ss_pred CCChhHHHHHhhcCCCCCCCceEEEEEeeecc
Q 041931 326 SAGIQELANMLKKGSKAKWGNQIGYIIFPFTI 357 (491)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~ 357 (491)
....+ + ++...||.+.........
T Consensus 284 Rl~Pp-L-------P~~y~GN~i~~~~~~~~~ 307 (444)
T PLN00140 284 RTKPP-M-------SRYSIGNLFWWALAAADP 307 (444)
T ss_pred cCCCC-C-------Ccccccchhhhheecccc
Confidence 75421 1 355689988655554444
No 20
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.08 E-value=0.22 Score=54.81 Aligned_cols=97 Identities=14% Similarity=0.040 Sum_probs=73.6
Q ss_pred HHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecCCCChhHHHHHhhcC
Q 041931 260 DDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKG 339 (491)
Q Consensus 260 ~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~~~~~~~~~~~~ 339 (491)
+.++++++.+|+|++.+++|+++..|.+|... .++.+++|+..|..... .+
T Consensus 7 ~~l~~~~~~~~~t~~~~l~a~~~~~l~r~~~~---------------------~~~~~g~~~~~r~~~~~-~~------- 57 (642)
T COG1020 7 AALRALAAEHGLTLFMVLLAAFAALLSRWSGQ---------------------EDIVLGLPVAGRPLALP-DV------- 57 (642)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC---------------------CCEEEeeeecCCCcccc-ch-------
Confidence 45889999999999999999999999888532 37899999888864321 11
Q ss_pred CCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHH
Q 041931 340 SKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFS 386 (491)
Q Consensus 340 ~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~ 386 (491)
+..+|-++..+.+..-.....++.+.+.++++.+.....+......
T Consensus 58 -~~~ig~f~n~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~ 103 (642)
T COG1020 58 -EQLIGLFANTLPLRLDISGRVTFAELLARLRELALGALEHQDLPGE 103 (642)
T ss_pred -HhhccchheeeeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHH
Confidence 2346777666666666653457899999999999988888776544
No 21
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=95.90 E-value=0.14 Score=61.65 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=99.1
Q ss_pred HHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecCCCChhHHHHHhhcCCCCCCCc
Q 041931 267 NAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGN 346 (491)
Q Consensus 267 ~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN 346 (491)
+++|+|.+.+++||++..|++|... .++.+++|++.|. |
T Consensus 42 ~~~~~t~~~~l~aa~~~lL~r~sg~---------------------~dv~iG~~~~~R~--------------------~ 80 (1389)
T TIGR03443 42 AGGGSTPFIILLAAFAALVYRLTGD---------------------EDIVLGTSSNKSG--------------------R 80 (1389)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHcCC---------------------CceEEEeeeCCCC--------------------c
Confidence 8899999999999999999999632 2799999998763 2
Q ss_pred eEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCCCCcceEEEeccCCCccceEEcCc
Q 041931 347 QIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASFPSETTLWFSNVMGPQEEISLYGY 426 (491)
Q Consensus 347 ~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~SNvpgp~~~l~~~G~ 426 (491)
.+.+++..+...++.+.++++++++.....++...+... .+.+ .......+...-+.+.+.+.+....
T Consensus 81 ---~lplr~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~i-~~~l-~~~~~~~~~p~lf~~~~~~~~~~~~------- 148 (1389)
T TIGR03443 81 ---PFVLRLNITPELSFLQLYAKVSEEEKEGASDIGVPFDEL-SEHI-QAAKKLERTPPLFRLAFQDAPDNQQ------- 148 (1389)
T ss_pred ---eEEEEecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHHH-HHHh-ccccCCCCCCccEEEEeecCCcccc-------
Confidence 135555555456889999999999999888777654421 1211 0001111100001223332221110
Q ss_pred eeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCC--HHHHHHHHHHHHHHHH
Q 041931 427 PIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPD--PHKLCDDLEESLHLIK 482 (491)
Q Consensus 427 ~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d--~~~l~~~~~~~l~~l~ 482 (491)
..+ .......|.+.+.-.++.+.+.+.++.++++. .+.+.+.|...|+++.
T Consensus 149 --~~~---~~~~~~dl~~~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~f~~lL~~~~ 201 (1389)
T TIGR03443 149 --TTY---STGSTTDLTVFLTPSSPELELSIYYNSLLFSSDRITIVADQLAQLLSAAS 201 (1389)
T ss_pred --ccc---ccCCccceEEEEEecCCcEEEEEEEchhcCCHHHHHHHHHHHHHHHHHHH
Confidence 011 11223467777777789999999999999953 4556666666666554
No 22
>PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi. In Fusarium sporotrichioides, this is required for acetylation of the C-15 hydroxyl group of trichothecenes in the biosynthesis of T-2 toxin [].; PDB: 3FP0_A 3FOT_A.
Probab=94.58 E-value=1.5 Score=43.38 Aligned_cols=305 Identities=16% Similarity=0.092 Sum_probs=125.3
Q ss_pred CCCCceEEEEEEEeCC----CCCHHHHHHHHHHHHh----hccCCccceecccccCCce---EEEeeec--CC-C-----
Q 041931 38 EPESNVYIVTMIGFKS----KINPEVVKANLEHSLL----KHRRFSSLQVVDEKIEGGL---KWVPTKV--NL-D----- 98 (491)
Q Consensus 38 ~~~~~v~~~~~~~~~~----~ld~~~l~~~l~~~~~----~~p~lr~~v~~~~~~~~~p---~w~~~~~--d~-~----- 98 (491)
......|+...++.-. .+++..|+..++..+. .||..-|+...+ .+-| .+..++- +. +
T Consensus 39 ~~~~dlyi~tsl~~~~~~st~ltL~~Lk~~~e~ALv~~RfeHPE~Act~~wd---~qv~piI~Y~~pks~e~a~~wa~~~ 115 (413)
T PF07428_consen 39 RGLYDLYIATSLRNAAPASTTLTLRNLKEMFERALVHQRFEHPECACTASWD---DQVPPIIQYQSPKSNEDALAWARGC 115 (413)
T ss_dssp TTTT-EEEEEEEEE-S-TT----HHHHHHHHHHHHHHHHHH-GGGG-EEE-----SSSS-EEEEE--SSHHHHHHHHHHH
T ss_pred ccccceEEeeeeccccccccceeHHHHHHHHHHHHHHHhhcCcccceeeeec---cCCCceEEecCCCCcHHHHHHhhcc
Confidence 3667788877776432 5777777777766553 489988888654 2222 1221111 11 1
Q ss_pred cceeeecCCCCCCCCcHHHHHHHHHHh--hcCCCCCCCCceEEEEecccC-------CCCeeEEEEEecccccccccHHH
Q 041931 99 DHVIVPNLEPKLIDSPDKFVEDYTSSL--SQTGIKMSMPMWDLHLLNIKT-------SDAESVAVLRVHHSLGDGTSLMS 169 (491)
Q Consensus 99 ~hv~~~~l~~~~~~~~~~~l~~~i~~~--~~~p~d~~~PlW~~~lv~~~~-------~~~~~~lv~~~HH~l~DG~s~~~ 169 (491)
-||+-. .. +.=++..-++.. ..+.-.+++ ..++.++-+.. .+...-++|-.||...||.|+-.
T Consensus 116 vHv~~~----~~---~~ld~~~e~e~~r~~~~d~~Psk-~i~iflv~~v~~~~t~i~~~~~V~~vFhsnHL~wDGis~r~ 187 (413)
T PF07428_consen 116 VHVRPT----AK---TGLDLRTESEEKRAAAKDNGPSK-SIVIFLVSDVPTLDTPIPQDATVELVFHSNHLFWDGISCRK 187 (413)
T ss_dssp EEEEE-----S-----HHHHHHHHHHHHCCT--------S-EEEEEESSSSTTS---TT-EEEEEEEE-GGG--HHHHHH
T ss_pred eeeccc----CC---CcchhhhhhhhhhhhcccCCCCc-ceEEEEecCCCCCCcccCCCCEEEEEEecccceeccccchh
Confidence 133311 11 111222222111 111111223 45666665432 23567799999999999999999
Q ss_pred HHHHHcccCCC----C--CCCCCCCCCCCCCCCCCC---CCCc-hHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCc
Q 041931 170 LLLACCRKVSD----P--NEVPTIPSVTKKIDSNGH---SKGF-WPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPL 239 (491)
Q Consensus 170 l~~~l~~~~~~----p--~~~~~~p~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (491)
|..+++...++ + ...+.+++...-....+. +.+. .......+....... .+.+..- ...-.-++
T Consensus 188 FvGDlfR~l~~~i~~~~~~e~~~~~WG~Ei~NL~~pvld~lk~~v~tlg~EFd~~~~qy---~~aL~~~---y~s~Gl~~ 261 (413)
T PF07428_consen 188 FVGDLFRLLGELIGASDKAELPKIQWGTEIKNLSPPVLDALKDDVSTLGSEFDDTCTQY---TSALMAN---YKSWGLPF 261 (413)
T ss_dssp HHHHHHHHHCCTTT---GGGS----TTTTGGGS---TGGGBSS-GGG--HHHHHHHHHH---HHHHHHH---HCS--CE-
T ss_pred hhHHHHHHHHhhcCCCcccccccCcchhhhhhcChHHHHHHhcchhhhhhHHHHHHHHH---HHHHhhc---ccccCCCC
Confidence 88888765322 1 112333332210000000 0111 122222221111111 1111110 01111223
Q ss_pred cCCCCCCCCCeEEEEeeechHHHHHH---HHHc---CCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCc
Q 041931 240 KGELGNGCLPRRFVHRSVSLDDVKLV---RNAM---NTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNI 313 (491)
Q Consensus 240 ~~~~~~~~~~r~~~~~~~~l~~vk~i---a~~~---g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~ 313 (491)
+...+ ..++....++.++-.++ +|.. +.|++-+..||+..||-+-+.... .|++.
T Consensus 262 ~pg~g----lpr~~i~~fs~~eS~Ai~k~vKt~~gP~~TisHL~qAAvllALL~~~~P~d---------------~~D~~ 322 (413)
T PF07428_consen 262 NPGLG----LPRCIIHSFSAEESIAIKKAVKTRLGPKYTISHLGQAAVLLALLRDLKPTD---------------LPDSQ 322 (413)
T ss_dssp ----------EEEEEEE--HHHHHHHHHHHHHHT-TT--HHHHHHHHHHHHHHHH----------------------TT-
T ss_pred CCCCC----CcceecccCChhhhHHHHHHHhcccCCCcCHHHHHHHHHHHHHHhccCCCC---------------CCCcc
Confidence 22222 33445666776554444 3432 799999999999999988764332 45654
Q ss_pred ceEEEEEeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeecc------CCCCCHHHHHHHHHHHHHHHHhchhhhHH
Q 041931 314 RLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTI------ALRDDPLDYLREAKVAMDRKKASLEASFS 386 (491)
Q Consensus 314 ~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~------~~~~~~~~rl~~v~~~~~~~k~~~~~~~~ 386 (491)
-+..-+||+.|+.... +.+ ..--+..-+...+.+.. .+.++=.-.++.+.+.++..|.+.+-++.
T Consensus 323 ~~isp~~v~GRR~Lr~-~~a-------~~~Y~~cqt~a~V~~eniks~~v~~~d~k~~~~~~l~~a~~~~k~~yd~~l~ 393 (413)
T PF07428_consen 323 AFISPMPVNGRRWLRP-KIA-------KNYYAICQTAAVVRFENIKSIAVSDADDKDIQVKALEQACRDVKKSYDQWLS 393 (413)
T ss_dssp -EEEEEEEE-GGGB-H-HHH-------TS--S--EEEEEEEE--GGGG---TTS-HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEecccccCcchhccc-chh-------hhhhhhhhccceEEEccchheeccccccccccHHHHHHHHHHHHHHHHHHhc
Confidence 5888999999997643 121 12234444555555542 22333233357777788888887766543
No 23
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=91.76 E-value=9 Score=36.39 Aligned_cols=172 Identities=15% Similarity=0.117 Sum_probs=81.6
Q ss_pred EEEeeechHHHHHHHHH----c-----CCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEee
Q 041931 252 FVHRSVSLDDVKLVRNA----M-----NTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMN 322 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia~~----~-----g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVs 322 (491)
+....+++..+.+..++ . ++|++++++-|++.||++|=.-.+. ..+..+. ... ..+.+++.|+
T Consensus 31 ~~~~evd~t~l~~~r~~l~~~~~~~~~kis~~~~likAva~AL~~~P~lNa~----~~~~~~i---~~~-~~vnIgvAV~ 102 (231)
T PF00198_consen 31 TLSREVDVTALLALRKELKEAGEEPGGKISITDFLIKAVALALKEHPELNAS----WDGDGEI---VLY-ERVNIGVAVD 102 (231)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHHTTST-THHHHHHHHHHHHHHHSGGGSEE----EETTSEE---EEE-SS--EEEEEE
T ss_pred EEEEEEEHHHHHHHHHHhhhHHHhhccCCChhHeeeehHhhhhHHHHHhccc----cccccce---eee-eeEEEEEEEE
Confidence 34577777665554332 2 8999999999999999876322110 1000000 111 2677788876
Q ss_pred ecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcC
Q 041931 323 LRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAAS 402 (491)
Q Consensus 323 lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~ 402 (491)
... | . +..-+...+..+..+..+.+++..++.++.... +.
T Consensus 103 ~~~-------------------G-L---~vPVIr~a~~~sl~eIa~e~~~l~~~ar~g~l~----------~~------- 142 (231)
T PF00198_consen 103 TPD-------------------G-L---VVPVIRDADKKSLAEIAKELRDLAERAREGKLT----------PE------- 142 (231)
T ss_dssp ETT-------------------E-E---EEEEETTGGGS-HHHHHHHHHHHHHHHHTT-------------GG-------
T ss_pred cCC-------------------C-E---EEEEEeCCccccHHHHHHHHhhhhccchhhhhh----------hh-------
Confidence 531 2 1 122222222345555555555444444432110 01
Q ss_pred CCCcceEEEeccCCCccceEEcCceeeEeecc-ccCCCceeEEEEE-----------EeCCEEEEEEEecCCCCCCHHHH
Q 041931 403 FPSETTLWFSNVMGPQEEISLYGYPIAYVAPS-CCGQPNGLMIHVV-----------SYANKMTFVLSVDDGLIPDPHKL 470 (491)
Q Consensus 403 ~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~-~~~~~~~l~v~v~-----------sy~~~l~~~v~~d~~~~~d~~~l 470 (491)
-+...++++||++.. | +....|+ .++...-++++-. .-...+.+++++|..++ |....
T Consensus 143 d~~g~TftisNlG~~-------g--~~~~~pii~~pq~ail~vG~i~~~p~~~~~~~~~~~~~~lslt~DHRvi-dG~~a 212 (231)
T PF00198_consen 143 DLQGGTFTISNLGMF-------G--VESFTPIINPPQVAILGVGAIRDRPVVEDGEVVVRPVMNLSLTFDHRVI-DGAEA 212 (231)
T ss_dssp GGSS-SEEEEEGGGT-------T---SCEE----TTSSEEEEEEEEEEEEEEETTCEEEEEEEEEEEEEETTTS--HHHH
T ss_pred hhhccceeeeecCCC-------C--cceeEccCCcccceEEEecceEEEEEEEeccceeeEEEEeEEeccceEE-cHHHH
Confidence 234468999998742 2 2223332 1111122344333 23568999999999988 54433
Q ss_pred HHHHHHHHHHHH
Q 041931 471 CDDLEESLHLIK 482 (491)
Q Consensus 471 ~~~~~~~l~~l~ 482 (491)
+ .|...+.++.
T Consensus 213 a-~Fl~~l~~~l 223 (231)
T PF00198_consen 213 A-RFLKDLKELL 223 (231)
T ss_dssp H-HHHHHHHHHH
T ss_pred H-HHHHHHHHHH
Confidence 3 3334444443
No 24
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=90.51 E-value=12 Score=38.81 Aligned_cols=39 Identities=13% Similarity=0.323 Sum_probs=33.9
Q ss_pred EEEeeechHHHHHHHHHc-----CCcchhHHHHHHHHHHHHHHH
Q 041931 252 FVHRSVSLDDVKLVRNAM-----NTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia~~~-----g~TvNdvllAa~a~aL~~~~~ 290 (491)
+....+++..+.+.++++ +.|++++++-|++.||.++=.
T Consensus 215 ~~~~~idvt~l~~~~k~~~~~~~~ls~~~~~ikav~~Al~~~P~ 258 (411)
T PRK11856 215 TLTDEVDVTALLALRKQLKAIGVKLTVTDFLIKAVALALKKFPE 258 (411)
T ss_pred EEEEEEEhHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHhCcH
Confidence 346888999999888888 899999999999999998743
No 25
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=86.54 E-value=32 Score=35.81 Aligned_cols=40 Identities=13% Similarity=0.190 Sum_probs=28.3
Q ss_pred EEEEeeechHHHHHHHHH---------cCCcchhHHHHHHHHHHHHHHH
Q 041931 251 RFVHRSVSLDDVKLVRNA---------MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 251 ~~~~~~~~l~~vk~ia~~---------~g~TvNdvllAa~a~aL~~~~~ 290 (491)
.+....+++..+.+..++ .+.|+|++++-|++.||.+|=.
T Consensus 210 ~~~~~eid~~~l~~~r~~~~~~~~~~g~kls~~~~likA~a~aL~~~P~ 258 (416)
T PLN02528 210 FHYVEEINVDALVELKASFQENNTDPTVKHTFLPFLIKSLSMALSKYPL 258 (416)
T ss_pred EEEEEEEEhHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCch
Confidence 334577776555543322 2589999999999999998743
No 26
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=84.42 E-value=41 Score=35.23 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=27.5
Q ss_pred EEeeechHHHHHHHHH--------cCCcchhHHHHHHHHHHHHHHH
Q 041931 253 VHRSVSLDDVKLVRNA--------MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 253 ~~~~~~l~~vk~ia~~--------~g~TvNdvllAa~a~aL~~~~~ 290 (491)
....+++.++.++.++ .+.|++++++=|++.||.+|=.
T Consensus 235 ~~~evd~t~l~~~r~~~~~~~~~~~klt~~~~l~kA~a~AL~~~P~ 280 (435)
T TIGR01349 235 VSIECNVDKLLALRKELNAMASEVYKLSVNDFIIKASALALREVPE 280 (435)
T ss_pred EEEEEEhHHHHHHHHHHHhhhhcCCcccHHHHHHHHHHHHHHhCcH
Confidence 3566666555554332 3699999999999999998744
No 27
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=83.82 E-value=28 Score=38.04 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=26.5
Q ss_pred EEeeechHHHHHHHHH----------cCCcchhHHHHHHHHHHHHHHH
Q 041931 253 VHRSVSLDDVKLVRNA----------MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 253 ~~~~~~l~~vk~ia~~----------~g~TvNdvllAa~a~aL~~~~~ 290 (491)
....+++.++.++.++ ...|+|++++-|++.||++|=.
T Consensus 381 ~~~evdvt~l~~~R~~l~~~~~~~~~~kls~~~~iiKA~a~AL~~~P~ 428 (590)
T TIGR02927 381 QLHEVDMTKIAALRARAKAAFAEKEGVNLTFLPFFAKAVIDALKAHPN 428 (590)
T ss_pred EEeEEEcHHHHHHHHHHHhhhHHhcCCcccHHHHHHHHHHHHHHhCCH
Confidence 3456666555443222 2589999999999999998743
No 28
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=81.34 E-value=60 Score=32.25 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=19.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHH
Q 041931 270 NTTINDVMLGVTQAGLSRYLNR 291 (491)
Q Consensus 270 g~TvNdvllAa~a~aL~~~~~~ 291 (491)
+.|++++++-|++.||.+|=.-
T Consensus 131 kls~~~~likA~a~AL~~~P~~ 152 (306)
T PRK11857 131 KLTFLPFIAKAILIALKEFPIF 152 (306)
T ss_pred CCCHHHHHHHHHHHHHHhCcHh
Confidence 5899999999999999988543
No 29
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=78.84 E-value=78 Score=32.06 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=17.9
Q ss_pred CCcchhHHHHHHHHHHHHHH
Q 041931 270 NTTINDVMLGVTQAGLSRYL 289 (491)
Q Consensus 270 g~TvNdvllAa~a~aL~~~~ 289 (491)
.+|+|++++=|++.||++|=
T Consensus 173 kls~~~~likA~a~AL~~~P 192 (347)
T PRK14843 173 KTTVTDLLSLAVVKTLMKHP 192 (347)
T ss_pred cccHHHHHHHHHHHHHHhCc
Confidence 59999999999999998873
No 30
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=77.86 E-value=92 Score=32.33 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=27.0
Q ss_pred EEeeechHHHHHHHHH----------cCCcchhHHHHHHHHHHHHHHH
Q 041931 253 VHRSVSLDDVKLVRNA----------MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 253 ~~~~~~l~~vk~ia~~----------~g~TvNdvllAa~a~aL~~~~~ 290 (491)
....+++.++.++.++ .+.|+|++++-|++.||.+|=.
T Consensus 206 ~~~evd~~~l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~ 253 (407)
T PRK05704 206 TFNEVDMTPVMDLRKQYKDAFEKKHGVKLGFMSFFVKAVVEALKRYPE 253 (407)
T ss_pred EEEEEeHHHHHHHHHHHHhhhHhhcCCCcCHHHHHHHHHHHHHHhCcH
Confidence 3566776655543222 2599999999999999998744
No 31
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=75.35 E-value=1.9 Score=40.25 Aligned_cols=23 Identities=26% Similarity=0.381 Sum_probs=18.9
Q ss_pred EEEEEecccccccccHHHHHHHH
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLAC 174 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l 174 (491)
-|-+.+||+++||.-..+++.+|
T Consensus 183 PvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 183 PVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp EEEEEEETTT--HHHHHHHHHHH
T ss_pred EEEEEEecccccHHHHHHHHHHh
Confidence 38999999999999999998876
No 32
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=74.96 E-value=81 Score=33.25 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=27.4
Q ss_pred EEEeeechHHHHHHHHH--------c--CCcchhHHHHHHHHHHHHHHH
Q 041931 252 FVHRSVSLDDVKLVRNA--------M--NTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia~~--------~--g~TvNdvllAa~a~aL~~~~~ 290 (491)
+...++++.++.++.++ + ..|++++++-|++.||.+|=.
T Consensus 261 t~~~evDvt~L~~lR~~l~~~~~~~~g~klS~~~~liKAva~AL~~~P~ 309 (463)
T PLN02226 261 TTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQHQPV 309 (463)
T ss_pred EEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCCH
Confidence 34567776555543322 2 589999999999999998743
No 33
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=73.48 E-value=1.2e+02 Score=31.56 Aligned_cols=39 Identities=5% Similarity=0.071 Sum_probs=27.1
Q ss_pred EEeeechHHHHHHHH--------Hc--CCcchhHHHHHHHHHHHHHHHH
Q 041931 253 VHRSVSLDDVKLVRN--------AM--NTTINDVMLGVTQAGLSRYLNR 291 (491)
Q Consensus 253 ~~~~~~l~~vk~ia~--------~~--g~TvNdvllAa~a~aL~~~~~~ 291 (491)
....+++.++.+..+ ++ ..|+|++++=|++.||++|=.-
T Consensus 217 ~~~eid~t~l~~~r~~~~~~~~~~~g~klS~~~~liKAva~AL~~~P~~ 265 (418)
T PTZ00144 217 TFNECDMSALMELRKEYKDDFQKKHGVKLGFMSAFVKASTIALKKMPIV 265 (418)
T ss_pred EEEEEechHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHh
Confidence 356666654443322 22 5899999999999999998544
No 34
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=72.80 E-value=3.4 Score=37.80 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=23.8
Q ss_pred EEEEecccccccccHHHHHHHHcccCCC
Q 041931 153 AVLRVHHSLGDGTSLMSLLLACCRKVSD 180 (491)
Q Consensus 153 lv~~~HH~l~DG~s~~~l~~~l~~~~~~ 180 (491)
+.+++||+.+||+-...|+..+....+.
T Consensus 186 lavq~hHA~vDG~Hi~~l~~~lQ~~~~~ 213 (219)
T COG4845 186 LAVQAHHANVDGFHIGQLFDQLQTLFSP 213 (219)
T ss_pred EEEEecccccchhhHHHHHHHHHHHhcC
Confidence 8899999999999999999887765433
No 35
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=71.28 E-value=27 Score=27.09 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=36.5
Q ss_pred CCCcceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHH
Q 041931 403 FPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKL 470 (491)
Q Consensus 403 ~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l 470 (491)
++.++.+++-|.+. ..+.++|..++..-.........|++.+...++.+.+.+.++.+++ +.+.+
T Consensus 24 plfqv~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~Y~~~lf-~~~ti 88 (91)
T PF13745_consen 24 PLFQVMFNYQNFSQ--SALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLEYNTDLF-SEETI 88 (91)
T ss_dssp SS-SEEEEEE------S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEEEETTT---HHHH
T ss_pred cccCeEEEEEeccc--ccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEEEEhHhC-CHHHH
Confidence 55566677777654 3467888887755332345566899999999999999999999988 44433
No 36
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=70.60 E-value=1.3e+02 Score=32.61 Aligned_cols=21 Identities=14% Similarity=0.371 Sum_probs=18.6
Q ss_pred CCcchhHHHHHHHHHHHHHHH
Q 041931 270 NTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 270 g~TvNdvllAa~a~aL~~~~~ 290 (491)
+.|+|++++-|++.||.+|=.
T Consensus 372 kls~~~~l~kA~~~AL~~~P~ 392 (546)
T TIGR01348 372 KLTVLHILMKAVAAALKKFPK 392 (546)
T ss_pred cccHHHHHHHHHHHHHHhCCh
Confidence 589999999999999998743
No 37
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=69.58 E-value=3.2 Score=39.08 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=22.1
Q ss_pred EEEEEecccccccccHHHHHHHHcc
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
-|-+.+||+++||.-..+++..|..
T Consensus 186 PvSvqvHHa~~DG~Hv~~F~~~lQ~ 210 (219)
T PRK13757 186 PLAIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_pred EEEEEEehhccchHHHHHHHHHHHH
Confidence 4889999999999999999887764
No 38
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=69.36 E-value=1.5e+02 Score=30.81 Aligned_cols=21 Identities=14% Similarity=0.226 Sum_probs=18.6
Q ss_pred CCcchhHHHHHHHHHHHHHHH
Q 041931 270 NTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 270 g~TvNdvllAa~a~aL~~~~~ 290 (491)
+.|+|++++=|++.||.+|=.
T Consensus 229 kls~~~~likA~a~AL~~~P~ 249 (403)
T TIGR01347 229 KLGFMSFFVKAVVAALKRFPE 249 (403)
T ss_pred CcCHHHHHHHHHHHHHHhCcH
Confidence 589999999999999998743
No 39
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=67.40 E-value=2e+02 Score=31.73 Aligned_cols=37 Identities=11% Similarity=0.175 Sum_probs=26.5
Q ss_pred EeeechHHHHHHHH---------H--cCCcchhHHHHHHHHHHHHHHH
Q 041931 254 HRSVSLDDVKLVRN---------A--MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 254 ~~~~~l~~vk~ia~---------~--~g~TvNdvllAa~a~aL~~~~~ 290 (491)
...+++..+.++.+ . ...|++++++=|++.||.+|=.
T Consensus 432 ~~evD~t~l~~~rk~~~~~~~~~~~g~k~t~~~~likAva~Al~~~P~ 479 (633)
T PRK11854 432 FDKADITELEAFRKQQNAEAEKRKLGVKITPLVFIMKAVAAALEQMPR 479 (633)
T ss_pred EeEEEcHHHHHHHHHHhhhhhhhcccCcccHHHHHHHHHHHHHHhCCH
Confidence 46666665554433 1 3589999999999999998743
No 40
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=67.32 E-value=1.9e+02 Score=31.27 Aligned_cols=38 Identities=13% Similarity=0.298 Sum_probs=27.6
Q ss_pred EEeeechHHHHHHHHH----------cCCcchhHHHHHHHHHHHHHHH
Q 041931 253 VHRSVSLDDVKLVRNA----------MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 253 ~~~~~~l~~vk~ia~~----------~g~TvNdvllAa~a~aL~~~~~ 290 (491)
....+++.++.++.++ .++|+|++++=|++.||.+|=.
T Consensus 337 ~~~evdvt~L~~lR~~l~~~~~~~~g~kls~~~~liKA~a~AL~~~P~ 384 (539)
T PLN02744 337 LTVDTRVDKLMALRSQLNSLQEASGGKKISVNDLVIKAAALALRKVPQ 384 (539)
T ss_pred EEEEEEcHHHHHHHHHHHHHhhhcccCccCHHHHHHHHHHHHHHhCcH
Confidence 3567776655554332 2589999999999999998744
No 41
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=56.82 E-value=2.9e+02 Score=29.93 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=26.1
Q ss_pred EeeechHHHHHHHH-------H--cCCcchhHHHHHHHHHHHHHHH
Q 041931 254 HRSVSLDDVKLVRN-------A--MNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 254 ~~~~~l~~vk~ia~-------~--~g~TvNdvllAa~a~aL~~~~~ 290 (491)
...+++..+.++.+ . ...|++++++-|++.||.+|=.
T Consensus 348 ~~evd~t~l~~~r~~~~~~~~~~g~k~s~~~~likAv~~al~~~P~ 393 (547)
T PRK11855 348 FDEADITDLEALRKQLKKEAEKAGVKLTMLPFFIKAVVAALKEFPV 393 (547)
T ss_pred EEEEEChHHHHHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHhCcH
Confidence 46667666554322 1 2478899999999999988743
No 42
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=54.65 E-value=3.7e+02 Score=31.29 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=59.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhcCccccccccccc-CCC-CCCCcceEEEEEeeecCCCChhHHHHHhhcCCCCCCCce
Q 041931 270 NTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSER-NNN-LPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQ 347 (491)
Q Consensus 270 g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~-~~~-~p~~~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~ 347 (491)
++|+++++.-|++.||..+=.-... +.+. .|. .-....+.+++.|++-.+++ ..+.
T Consensus 169 KVSFThlI~kAvv~AL~~~P~mNas-------y~~~DGKp~iv~~~~VNlGiAVdl~~~dG---------------sRgL 226 (1228)
T PRK12270 169 KVSFTHLIGYALVQALKAFPNMNRH-------YAEVDGKPTLVTPAHVNLGLAIDLPKKDG---------------SRQL 226 (1228)
T ss_pred cccHHHHHHHHHHHHHHhCchhhce-------eeccCCCceeeccCCcceEEEEecCCCCC---------------Ccce
Confidence 6899999999999999887432211 1110 010 11113788999998865442 1222
Q ss_pred EEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCCCCcceEEEeccCCC
Q 041931 348 IGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASFPSETTLWFSNVMGP 417 (491)
Q Consensus 348 ~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~SNvpgp 417 (491)
+ ...+...+..++.+.....++..++.+...-.. . -+...++++||.++.
T Consensus 227 V---VPvIK~Ad~l~f~ef~~ay~dLV~KAR~gKLt~----------e-------D~~GgTFTISN~G~i 276 (1228)
T PRK12270 227 V---VPAIKGAETMDFAQFWAAYEDIVRRARDGKLTA----------D-------DFQGTTISLTNPGGI 276 (1228)
T ss_pred e---eccccccccCCHHHHHHHHHHHHHHHHcCCCCH----------H-------HhCCceEEEecCCcc
Confidence 2 222222235577777766666666555432210 1 234568999997653
No 43
>PF01402 RHH_1: Ribbon-helix-helix protein, copG family; InterPro: IPR002145 CopG, also known as RepA, is responsible for the regulation of plasmid copy number. It binds to the repAB promoter and controls synthesis of the plasmid replication initiator protein RepB. Many bacterial transcription regulation proteins bind DNA through a 'helix-turn-helix' motif, nevertheless CopG displays a fully defined HTH-motif structure that is involved not in DNA-binding, but in the maintenance of the intrinsic dimeric functional structure and cooperativity [, ].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2BJ3_B 2BJ8_A 2BJ1_A 2BJ9_A 2BJ7_B 1EA4_L 2CPG_C 1B01_B 2BA3_A 2K9I_B ....
Probab=50.56 E-value=38 Score=21.82 Aligned_cols=31 Identities=3% Similarity=0.083 Sum_probs=23.2
Q ss_pred eeechHHHHHHHHHcCCcchhHHHHHHHHHH
Q 041931 255 RSVSLDDVKLVRNAMNTTINDVMLGVTQAGL 285 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL 285 (491)
..--.+.+.++|++.|.|.++++--++...+
T Consensus 7 ~~~~~~~l~~~a~~~g~s~s~~ir~ai~~~l 37 (39)
T PF01402_consen 7 PDELYERLDELAKELGRSRSELIREAIREYL 37 (39)
T ss_dssp EHHHHHHHHHHHHHHTSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 3444678889999999999999866655433
No 44
>PF03869 Arc: Arc-like DNA binding domain; InterPro: IPR005569 Arc repressor act by the cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognise bases in the major groove [].; GO: 0003677 DNA binding; PDB: 3QOQ_D 1MNT_B 1QTG_B 1BDV_A 1PAR_C 1BDT_C 1ARR_B 1MYL_F 1MYK_A 1NLA_B ....
Probab=47.45 E-value=37 Score=23.74 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=24.7
Q ss_pred eeechHHHHHHHHHcCCcchhHHHHHHHHHHH
Q 041931 255 RSVSLDDVKLVRNAMNTTINDVMLGVTQAGLS 286 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~ 286 (491)
..--.+.|+..|+.+|-++|.-++.++-.+|.
T Consensus 12 P~~l~~~lk~~A~~~gRS~NsEIv~~L~~~l~ 43 (50)
T PF03869_consen 12 PEELKEKLKERAEENGRSMNSEIVQRLEEALK 43 (50)
T ss_dssp EHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 33346899999999999999998887776654
No 45
>PF05534 HicB: HicB family; InterPro: IPR008651 This family consists of several bacterial HicB related proteins. The function of HicB is unknown although it is thought to be involved in pilus formation. It has been speculated that HicB performs a function antagonistic to that of pili and yet is necessary for invasion of certain niches [].
Probab=36.61 E-value=30 Score=24.32 Aligned_cols=22 Identities=9% Similarity=0.025 Sum_probs=18.3
Q ss_pred hHHHHHHHHHcCCcchhHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGV 280 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa 280 (491)
-++++..|++.|+|+|+.+.-+
T Consensus 29 h~~l~~~A~~~gvSlN~~I~~a 50 (51)
T PF05534_consen 29 HRALAEAAAAEGVSLNQWIEEA 50 (51)
T ss_pred HHHHHHHHHHhCCCHHHHHHHH
Confidence 3788888999999999987654
No 46
>PF13443 HTH_26: Cro/C1-type HTH DNA-binding domain; PDB: 3TYR_A 3TYS_A 3B7H_A.
Probab=33.97 E-value=22 Score=25.71 Aligned_cols=23 Identities=22% Similarity=0.413 Sum_probs=15.8
Q ss_pred eeechHHHHHHHHHcCCcchhHH
Q 041931 255 RSVSLDDVKLVRNAMNTTINDVM 277 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~TvNdvl 277 (491)
...+++.+.++|+.+||+++|++
T Consensus 36 ~~~~~~~l~~ia~~l~~~~~el~ 58 (63)
T PF13443_consen 36 SNPSLDTLEKIAKALNCSPEELF 58 (63)
T ss_dssp ----HHHHHHHHHHHT--HHHCT
T ss_pred ccccHHHHHHHHHHcCCCHHHHh
Confidence 45678999999999999999975
No 47
>PHA01513 mnt Mnt
Probab=32.96 E-value=53 Score=25.62 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=25.6
Q ss_pred echHHHHHHHHHcCCcchhHHHHHHHHHHH
Q 041931 257 VSLDDVKLVRNAMNTTINDVMLGVTQAGLS 286 (491)
Q Consensus 257 ~~l~~vk~ia~~~g~TvNdvllAa~a~aL~ 286 (491)
--.++|+..|+..|.++|.-+..++..+|.
T Consensus 15 eLk~rL~~aA~~nGRSmNaeIv~~Le~al~ 44 (82)
T PHA01513 15 ELKEKLKQRAKANGRSLNAELVQIVQDALS 44 (82)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 335789999999999999999988887764
No 48
>smart00803 TAF TATA box binding protein associated factor. TAFs (TATA box binding protein associated factors) are part of the transcription initiation factor TFIID multimeric protein complex. TFIID is composed of the TATA box binding protein (TBP) and a number of TAFs. The TAFs provide binding sites for many different transcriptional activators and co-activators that modulate transcription initiation by Pol II. TAF proteins adopt a histone-like fold.
Probab=32.54 E-value=1e+02 Score=22.84 Aligned_cols=35 Identities=9% Similarity=0.171 Sum_probs=29.5
Q ss_pred echHHHHHHHHHcCCc-chhHHHHHHHHHHHHHHHH
Q 041931 257 VSLDDVKLVRNAMNTT-INDVMLGVTQAGLSRYLNR 291 (491)
Q Consensus 257 ~~l~~vk~ia~~~g~T-vNdvllAa~a~aL~~~~~~ 291 (491)
++.+.++++++..|++ ++|-....++..+..++.+
T Consensus 3 ~p~~~i~ria~~~Gi~ris~~a~~~l~~~~e~rl~~ 38 (65)
T smart00803 3 LPKETIKDVAESLGIGNLSDEAAKLLAEDVEYRIKE 38 (65)
T ss_pred CCHHHHHHHHHHCCCccccHHHHHHHHHHHHHHHHH
Confidence 5678999999999998 9999888888888766654
No 49
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=29.54 E-value=28 Score=36.17 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=25.5
Q ss_pred EEEEEecccccccccHHHHHHHHcccCCCC
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRKVSDP 181 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p 181 (491)
-|.+.+||.+.||.-+.+|+..+.+...+|
T Consensus 376 ~lslt~DHRviDG~~aa~Fl~~l~~~le~p 405 (411)
T PRK11856 376 PLSLSFDHRVIDGADAARFLKALKELLENP 405 (411)
T ss_pred EEeEEeehhhcCcHHHHHHHHHHHHHHhCH
Confidence 488999999999999999999887655444
No 50
>PF12651 RHH_3: Ribbon-helix-helix domain
Probab=28.30 E-value=1e+02 Score=20.88 Aligned_cols=33 Identities=9% Similarity=0.155 Sum_probs=25.5
Q ss_pred eechHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Q 041931 256 SVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 256 ~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~ 288 (491)
.--.++++.+++..|+..+.++=-|+...|..|
T Consensus 11 ~el~~~L~~ls~~t~i~~S~Ll~eAle~~l~ky 43 (44)
T PF12651_consen 11 KELYEKLKELSEETGIPKSKLLREALEDYLEKY 43 (44)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhc
Confidence 334689999999999999999877666555544
No 51
>KOG0557 consensus Dihydrolipoamide acetyltransferase [Energy production and conversion]
Probab=27.85 E-value=4.4e+02 Score=27.65 Aligned_cols=36 Identities=22% Similarity=0.437 Sum_probs=24.4
Q ss_pred EEEeeechHHHHHHHH-------HcCCcchhHHHHHHHHHHHH
Q 041931 252 FVHRSVSLDDVKLVRN-------AMNTTINDVMLGVTQAGLSR 287 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia~-------~~g~TvNdvllAa~a~aL~~ 287 (491)
+......++.+-++.+ ..++++||++.=+.+.++++
T Consensus 269 yvt~~~~~d~ll~~r~~ln~~~~~~~vsvndliiKAaa~al~~ 311 (470)
T KOG0557|consen 269 YVTVDVNLDKLLALREKLNFEKSIKKVSLNDLIAKAAALALAK 311 (470)
T ss_pred EEeeeeehHHHHHHHHHhhhcccCcccchhHHHHHHHHHHHhc
Confidence 3345555555544433 34799999999988888865
No 52
>PRK03762 hypothetical protein; Provisional
Probab=26.63 E-value=2.1e+02 Score=23.42 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=29.4
Q ss_pred eCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 041931 449 YANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTASL 486 (491)
Q Consensus 449 y~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~a~ 486 (491)
-++.--.++.-|++++.|.+.|.|++..++.+-.+.+.
T Consensus 47 nG~~~i~~i~Id~~ll~D~e~LeDLI~aAiNdA~~k~~ 84 (103)
T PRK03762 47 NGKGEVIDISIDDSLLEDKESLQILLISAINDVYKMVE 84 (103)
T ss_pred EcCceEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 35666677888888888999999998888887766553
No 53
>COG3655 Predicted transcriptional regulator [Transcription]
Probab=23.31 E-value=54 Score=25.00 Aligned_cols=23 Identities=13% Similarity=0.404 Sum_probs=20.5
Q ss_pred eeechHHHHHHHHHcCCcchhHH
Q 041931 255 RSVSLDDVKLVRNAMNTTINDVM 277 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~TvNdvl 277 (491)
..+.++.+-++|++..|+++|++
T Consensus 41 k~I~~~tL~~iC~~LeCqpgDil 63 (73)
T COG3655 41 KAIRLSTLEKICKALECQPGDIL 63 (73)
T ss_pred ceeeHHHHHHHHHHcCCChhhee
Confidence 56778999999999999999985
No 54
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=20.95 E-value=47 Score=35.92 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=25.4
Q ss_pred EEEEEecccccccccHHHHHHHHcccCCCC
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRKVSDP 181 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p 181 (491)
-|.+.+||-++||.-+.+|+..+.....+|
T Consensus 513 ~lslt~DHRviDG~~aa~Fl~~l~~~le~p 542 (547)
T PRK11855 513 PLSLSYDHRVIDGATAARFTNYLKQLLADP 542 (547)
T ss_pred EEeEEccchhcCcHHHHHHHHHHHHHHhCH
Confidence 388999999999999999999888655444
No 55
>PRK14623 hypothetical protein; Provisional
Probab=20.73 E-value=2.8e+02 Score=22.87 Aligned_cols=37 Identities=30% Similarity=0.310 Sum_probs=26.8
Q ss_pred CCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 041931 450 ANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTASL 486 (491)
Q Consensus 450 ~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~a~ 486 (491)
+..=-+++.-|++++.|.+.|.|++..++.+-.+.+.
T Consensus 44 G~~~i~~i~Idp~~l~D~E~LeDLI~aAvn~A~~k~~ 80 (106)
T PRK14623 44 ANREIKSISIDDELLEDKEQLEDYLVLTLNKAIEKAT 80 (106)
T ss_pred cCccEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444456667777888999999999888887665553
No 56
>PRK14628 hypothetical protein; Provisional
Probab=20.56 E-value=3.1e+02 Score=23.05 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=28.0
Q ss_pred CCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 041931 450 ANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTASL 486 (491)
Q Consensus 450 ~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~a~ 486 (491)
++.--.+|.-|+.++.|.+.|.|++..++.+-...+.
T Consensus 62 G~~ei~~I~Idp~~l~D~E~LeDLIiaA~NdA~~ka~ 98 (118)
T PRK14628 62 CDRRVKDIEIDEDLKEDFETLKDLLIAGMNEVMEKIE 98 (118)
T ss_pred cCceEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4455566777888888999999999988887666553
No 57
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=20.52 E-value=42 Score=22.03 Aligned_cols=27 Identities=7% Similarity=0.102 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHHHHhhccCCccceec
Q 041931 54 KINPEVVKANLEHSLLKHRRFSSLQVV 80 (491)
Q Consensus 54 ~ld~~~l~~~l~~~~~~~p~lr~~v~~ 80 (491)
.+|.++|+..+...+.+||.+...++.
T Consensus 9 ~Ld~~qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 9 TLDKDQLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp TS-HHHHHHHHHHHHHHSTHHHHHHHT
T ss_pred HcCHHHHHHHHHHHHHhChhHHHHHHh
Confidence 579999999999999999998776654
No 58
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=20.45 E-value=2.4e+02 Score=24.67 Aligned_cols=48 Identities=10% Similarity=0.162 Sum_probs=40.5
Q ss_pred CCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Q 041931 437 GQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTA 484 (491)
Q Consensus 437 ~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~ 484 (491)
-....++|-+.+-+|+-.++|+-.++.++..+.+.++++++++.|.+-
T Consensus 17 w~DrSvNvf~~~~~gt~~~sfvIsRd~~~~g~~~~~y~~rql~~l~k~ 64 (147)
T COG5435 17 WQDRSVNVFVSGDNGTSGFSFVISRDPLEPGDTFPEYVQRQLALLRKQ 64 (147)
T ss_pred hccceEEEEEecCCCcceeEEEEecCCCCCCCcHHHHHHHHHHHHHhh
Confidence 346688888888888899999999988887788999999999988764
Done!