Query 041931
Match_columns 491
No_of_seqs 145 out of 1230
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 21:06:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1l5a_A Amide synthase, VIBH; n 99.9 8.1E-25 2.8E-29 226.7 37.0 381 29-484 1-407 (436)
2 2jgp_A Tyrocidine synthetase 3 99.9 8.7E-26 3E-30 239.6 29.5 385 24-483 94-508 (520)
3 1q9j_A PAPA5, polyketide synth 99.9 2.8E-25 9.6E-30 228.9 27.6 390 24-483 5-415 (422)
4 4hvm_A Tlmii; PSI-biology, mid 99.9 2.4E-24 8.2E-29 227.0 28.7 404 24-483 11-459 (493)
5 2xhg_A Tyrocidine synthetase A 99.9 1E-22 3.5E-27 212.7 34.8 406 24-485 15-457 (466)
6 2vsq_A Surfactin synthetase su 99.9 1.7E-23 5.8E-28 244.5 27.2 394 25-483 11-430 (1304)
7 3fot_A 15-O-acetyltransferase; 99.6 2.7E-13 9.1E-18 142.3 33.7 411 26-482 30-515 (519)
8 2bgh_A Vinorine synthase; VS, 98.3 3.1E-05 1.1E-09 79.3 19.2 276 26-375 25-322 (421)
9 4g22_A Hydroxycinnamoyl-COA sh 98.1 0.00015 5.2E-09 74.5 18.6 135 24-176 24-175 (439)
10 2xr7_A Malonyltransferase; xen 98.0 0.00068 2.3E-08 69.9 21.8 280 26-358 21-333 (453)
11 2e1v_A Acyl transferase; BAHD 97.9 0.002 6.7E-08 66.4 24.0 262 26-358 26-331 (454)
12 2rkv_A Trichothecene 3-O-acety 97.7 0.011 3.6E-07 60.8 26.0 143 27-176 5-173 (451)
13 3rqc_A Probable lipoamide acyl 92.0 5.3 0.00018 36.4 15.4 173 251-482 32-214 (224)
14 3cla_A Type III chloramphenico 91.0 3.2 0.00011 37.6 12.7 38 251-288 28-65 (213)
15 1scz_A E2, dihydrolipoamide su 90.9 6.8 0.00023 35.9 15.0 169 252-482 31-223 (233)
16 1dpb_A Dihydrolipoyl-transacet 89.0 10 0.00035 34.9 14.7 37 252-288 42-87 (243)
17 3mae_A 2-oxoisovalerate dehydr 88.4 15 0.00052 34.1 15.4 172 252-483 45-238 (256)
18 2ii3_A Lipoamide acyltransfera 88.3 12 0.00042 34.8 14.8 37 252-288 57-102 (262)
19 2i9d_A Chloramphenicol acetylt 86.8 17 0.0006 32.7 16.8 38 251-288 30-67 (217)
20 3b8k_A PDCE2;, dihydrolipoylly 86.8 11 0.00038 34.6 13.4 170 254-482 41-231 (239)
21 1q23_A Chloramphenicol acetylt 85.6 20 0.0007 32.3 15.1 38 251-288 33-70 (219)
22 3l60_A Branched-chain alpha-ke 83.8 21 0.00073 32.9 13.8 38 251-288 40-82 (250)
23 1baz_A ARC repressor; transcri 52.8 16 0.00056 24.8 3.9 28 259-286 19-46 (53)
24 2xt6_A 2-oxoglutarate decarbox 52.5 2.1E+02 0.007 32.4 15.0 38 251-288 11-58 (1113)
25 3qoq_A Alginate and motility r 52.4 16 0.00054 26.5 3.9 29 258-286 30-58 (69)
26 1nla_A Transcriptional repress 47.0 22 0.00076 25.3 3.9 30 259-288 19-48 (64)
27 1p94_A Plasmid partition prote 42.1 25 0.00086 26.0 3.7 29 259-291 46-74 (76)
28 2k9i_A Plasmid PRN1, complete 41.1 34 0.0011 22.8 4.1 35 255-293 17-51 (55)
29 3rqc_A Probable lipoamide acyl 38.8 14 0.00048 33.5 2.3 30 153-182 189-218 (224)
30 3cla_A Type III chloramphenico 35.8 17 0.00057 32.8 2.2 113 58-177 52-207 (213)
31 2i9d_A Chloramphenicol acetylt 34.4 18 0.00061 32.6 2.2 25 152-176 190-214 (217)
32 2an7_A Protein PARD; bacterial 33.6 23 0.00077 26.3 2.2 23 259-281 13-35 (83)
33 1q23_A Chloramphenicol acetylt 33.3 19 0.00065 32.5 2.2 26 152-177 186-211 (219)
34 1scz_A E2, dihydrolipoamide su 32.4 15 0.00053 33.5 1.5 30 152-181 197-226 (233)
35 3b8k_A PDCE2;, dihydrolipoylly 31.2 14 0.00048 33.9 1.0 31 151-181 204-234 (239)
36 2deb_A CPT II, carnitine O-pal 29.7 2.3E+02 0.0079 29.9 10.2 68 408-487 581-648 (653)
37 1dpb_A Dihydrolipoyl-transacet 29.0 17 0.00056 33.5 1.0 30 152-181 209-238 (243)
38 2kel_A SVTR protein, uncharact 26.9 77 0.0026 21.7 3.9 29 259-291 25-53 (56)
39 2ii3_A Lipoamide acyltransfera 26.8 21 0.00071 33.3 1.3 29 152-180 225-253 (262)
40 2bsq_E FITA, trafficking prote 26.1 67 0.0023 23.7 3.7 28 259-286 13-40 (77)
41 1nm8_A Carnitine O-acetyltrans 26.1 2.3E+02 0.0078 29.7 9.3 69 408-486 529-598 (616)
42 2gpe_A Bifunctional protein PU 25.8 1.1E+02 0.0037 20.1 4.6 34 255-292 11-44 (52)
43 1u9p_A PARC; unknown function; 25.1 65 0.0022 26.0 3.7 27 259-285 30-56 (120)
44 1t1u_A Choline O-acetyltransfe 23.1 2.7E+02 0.0093 29.3 9.2 69 408-486 545-614 (639)
45 3mae_A 2-oxoisovalerate dehydr 22.9 32 0.0011 31.9 1.7 32 152-183 211-242 (256)
46 2cpg_A REPA protein, transcrip 22.7 1.1E+02 0.0039 19.1 4.0 33 254-290 9-41 (45)
47 2hue_C Histone H4; mini beta s 22.0 1E+02 0.0035 23.0 4.2 37 256-292 10-47 (84)
48 1mnt_A MNT repressor; transcri 20.1 82 0.0028 23.1 3.2 27 259-285 16-42 (76)
No 1
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=99.95 E-value=8.1e-25 Score=226.66 Aligned_cols=381 Identities=10% Similarity=0.037 Sum_probs=250.0
Q ss_pred CChhhhhcc-----CCCCceEE-EEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEeeecCCCccee
Q 041931 29 LSPMARMFH-----EPESNVYI-VTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVPTKVNLDDHVI 102 (491)
Q Consensus 29 Ls~~d~~~~-----~~~~~v~~-~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~~~~d~~~hv~ 102 (491)
||++|+.+| .+....|+ ...++++|++|.++|++++...+.+||.||+++... .+ ++.+..++..++
T Consensus 1 Ls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~rh~~LRt~f~~~---~~---~v~~~~~~~~~~- 73 (436)
T 1l5a_A 1 MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQ---GE---LYWHPFSPPIDY- 73 (436)
T ss_dssp CCGGGHHHHHHHHHSTTSCCSEEEEEEEEESSCCHHHHHHHHHHHHHTCGGGGEEECTT---CC---EEECSSCCCCEE-
T ss_pred CCHHHHHHHHHHHcCCCCCccceeEEEEEeCCCCHHHHHHHHHHHHHHhheeEEEEEec---CC---eECCCcCCCccE-
Confidence 689999554 45555554 367889999999999999999999999999999864 33 444333333222
Q ss_pred eecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcccCCC-
Q 041931 103 VPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSD- 180 (491)
Q Consensus 103 ~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~~~~- 180 (491)
.++.... ..++++.+++.+...+|||+. .|+|++.+++. +++++.+++.+||+++||+|+..++.++...|..
T Consensus 74 -~d~~~~~--~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~ 148 (436)
T 1l5a_A 74 -QDLSIHL--EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRL--SHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSL 148 (436)
T ss_dssp -EECTTCT--THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEE--ETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -EeCCCCC--CHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEE--cCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHH
Confidence 2322111 145678899999999999996 59999999974 2578999999999999999999999998876632
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCchHHHH--------HHHHHHHHHHHHHHHHHHHhccccCCCCCCccCCCCCC-CCC
Q 041931 181 --PNEVPTIPSVTKKIDSNGHSKGFWPYLL--------FKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNG-CLP 249 (491)
Q Consensus 181 --p~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 249 (491)
....+ .+... ...+..+.. .....+|... +.. . .+...+..+.... ...
T Consensus 149 ~~g~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~W~~~------l~~----~-~~~~~lp~~~~~~~~~~ 208 (436)
T 1l5a_A 149 LSGQTPT-AAFKP--------YQSYLEEEAAYLTSHRYWQDKQFWQGY------LRE----A-PDLTLTSATYDPQLSHA 208 (436)
T ss_dssp HHTCCCC-CCCCC--------HHHHHHHHHHHHTSHHHHHHHHHHHHH------HHT----S-CCCCBCCTTCCGGGCCE
T ss_pred hcCCCCC-CCccC--------HHHHHHHHHHhhccHhHHHHHHHHHHH------hcC----C-CCcccCCCCCCCCcccc
Confidence 11111 11100 011111100 0111233321 111 0 1111121111100 001
Q ss_pred eE--EEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecCCC
Q 041931 250 RR--FVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSA 327 (491)
Q Consensus 250 r~--~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~ 327 (491)
.. +.......+.++++|+++|+|++++++|+++.+|++|.. ..+.+++|++.|...
T Consensus 209 ~~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~L~~~~g----------------------~dv~ig~~~~~R~~~ 266 (436)
T 1l5a_A 209 VSLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEP----------------------DAPWLWLPFMNRWGS 266 (436)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHST----------------------TCCEEEEEECCCTTS
T ss_pred eeeEEecCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhC----------------------CceEEeeecccCCCh
Confidence 11 122233357899999999999999999999999999852 168999999999865
Q ss_pred ChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhH--hhcCCCC
Q 041931 328 GIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCN--KAASFPS 405 (491)
Q Consensus 328 ~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~--~~~~~~~ 405 (491)
+. +..+|++++.+++.+..+...++.+.++++++++.....+....+. .+ .+.+. +....+.
T Consensus 267 ~~-----------~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~----~i-~~~l~~~~~~~~lf 330 (436)
T 1l5a_A 267 VA-----------ANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIE----QI-EQDQGLNAEQSYFM 330 (436)
T ss_dssp GG-----------GGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHH----HH-HHHTTCCTTCCBCC
T ss_pred HH-----------hcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhcCCCHH----HH-HHHhcccccCCCcc
Confidence 42 3579999999999998875568999999999999988877655433 11 12221 1112334
Q ss_pred cceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEE-EeCCEEEEEEEecCCCCCC--HHHHHHHHHHHHHHHH
Q 041931 406 ETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVV-SYANKMTFVLSVDDGLIPD--PHKLCDDLEESLHLIK 482 (491)
Q Consensus 406 ~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~-sy~~~l~~~v~~d~~~~~d--~~~l~~~~~~~l~~l~ 482 (491)
+..+++.|.+.+ .++|..+........... .+.+.+. .++|.+.+.+.++.++++. ++.+.+.|...|+++.
T Consensus 331 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~l~l~v~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~l~ 405 (436)
T 1l5a_A 331 SPFINILPFESP----HFADCQTELKVLASGSAE-GINFTFRGSPQHELCLDITADLASYPQSHWQSHCERFPRFFEQLL 405 (436)
T ss_dssp CSEEEEECCCCC----CCTTCEEEEEEEEECCCC-SEEEEEEECTTSCEEEEEEEETTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeeccCcc----ccCCCeeEEEecCCCCcc-ceEEEEEecCCCcEEEEEEeChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 444555555433 567777765443221122 7888887 5789999999999999964 6778888888888776
Q ss_pred HH
Q 041931 483 TA 484 (491)
Q Consensus 483 ~~ 484 (491)
+.
T Consensus 406 ~~ 407 (436)
T 1l5a_A 406 AR 407 (436)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 2
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.95 E-value=8.7e-26 Score=239.61 Aligned_cols=385 Identities=15% Similarity=0.122 Sum_probs=255.0
Q ss_pred CCCccCChhhhhcc-----CCCCceEE-EEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecC
Q 041931 24 EENQPLSPMARMFH-----EPESNVYI-VTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVN 96 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~-----~~~~~v~~-~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d 96 (491)
+...|||+.|+.+| .+....|+ ...++++|++|.++|++++...+.+||.||+++... .|.++++- ++.+
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~---~~~~~q~v~~~~~ 170 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIARHESLRTSFAVV---NGEPVQNIHEDVP 170 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEEEE---TTEEEEEECSCCC
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHHHhHhheeEEEee---CCEEEEEECCCCC
Confidence 45679999999544 34444443 356788899999999999999999999999999874 56777665 4444
Q ss_pred CCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHc
Q 041931 97 LDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACC 175 (491)
Q Consensus 97 ~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~ 175 (491)
+...+ .++ +++++++ +.+...+|||+. .|+|++.+++. +++++.+++.+||+++||+|+..++.++.
T Consensus 171 ~~~~~--~~~-------~~~~~~~-~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HH~i~Dg~S~~~l~~el~ 238 (520)
T 2jgp_A 171 FALAY--SEV-------TEEEARE-LVSSLVQPFDLEVAPLIRVSLLKI--GEDRYVLFTDMHHSISDGVSSGILLAEWV 238 (520)
T ss_dssp CCCEE--EEC-------CHHHHHH-HHHHTCCCCCTTSSCCEEEEEEEE--ETTEEEEEEEEBGGGCCHHHHHHHHHHHH
T ss_pred CceEE--EeC-------CHHHHHH-HHHHhcCCCCCCCCcceeEEEEEE--cCCcEEEEEEccceeecHhHHHHHHHHHH
Confidence 43322 222 3455666 677788999996 79999999985 25789999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHH--------HHHHHHHHHHHHHHHHHHhccccCCCCCCcc--CC-CC
Q 041931 176 RKVSDPNEVPTIPSVTKKIDSNGHSKGFWPYLLF--------KLWLFWNTLVDVVMFIATALMFVRDTKTPLK--GE-LG 244 (491)
Q Consensus 176 ~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 244 (491)
..|... . +|... .....|..+... ....+|.. .+ ....+...+. .+ ++
T Consensus 239 ~~Y~~~-~---l~~~~------~~~~d~~~~~~~~~~~~~~~~~~~yW~~----------~l-~~~~~~~~lp~~~~~~~ 297 (520)
T 2jgp_A 239 QLYQGD-V---LPELR------IQYKDFAVWQQEFSQSAAFHKQEAYWLQ----------TF-ADDIPVLNLPTDFTRPS 297 (520)
T ss_dssp HHHTTC-C---CCCCS------CCHHHHHHHHHHHTTSHHHHHHHHHHHH----------HT-SSCCCCCCCCCSSCCCS
T ss_pred HHHccC-C---CCCCC------CCHHHHHHHHHHhhcChhhHHHHHHHHH----------Hh-CCCCCcCCCCCCCCCCC
Confidence 877432 1 11110 000111111110 01112221 11 0111111111 11 11
Q ss_pred CCCCCeEEEEeeec---hHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEe
Q 041931 245 NGCLPRRFVHRSVS---LDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFM 321 (491)
Q Consensus 245 ~~~~~r~~~~~~~~---l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPV 321 (491)
............++ .+.++++|+++|+|++++++||++.+|++|.. . .++.+++|+
T Consensus 298 ~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~~~---~------------------~dv~~g~~~ 356 (520)
T 2jgp_A 298 TQSFAGDQCTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKYAG---Q------------------EDIIVGTPI 356 (520)
T ss_dssp SCCCBEEEEEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT---C------------------SCEEEEEEE
T ss_pred CCCCCccEEEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC---C------------------CCeEEEecc
Confidence 00001111122333 57899999999999999999999999999963 2 279999999
Q ss_pred eecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHh--Hh
Q 041931 322 NLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFC--NK 399 (491)
Q Consensus 322 slR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~--~~ 399 (491)
+.|...+. +..+|++++.+++.+..+...++.+.++++++++.....+....+. .+ .+.+ .+
T Consensus 357 ~gR~~~~~-----------~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~----~i-~~~l~~~r 420 (520)
T 2jgp_A 357 TGRSHADL-----------EPIVGMFVNTLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPFE----EL-VEKLAIAR 420 (520)
T ss_dssp CCCCSGGG-----------TTCCSCCCEEEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCHH----HH-HHHTCCCC
T ss_pred CCCCchhh-----------hccEEeeeeeeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCHH----HH-HHHhcCCC
Confidence 99986432 4579999999999998875668999999999999888776554332 11 1211 11
Q ss_pred -hcC-CCCcceEEEeccCCCccceEEcCceeeEeecccc--CCCceeEEEEEEeCCEEEEEEEecCCCCCC--HHHHHHH
Q 041931 400 -AAS-FPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCC--GQPNGLMIHVVSYANKMTFVLSVDDGLIPD--PHKLCDD 473 (491)
Q Consensus 400 -~~~-~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~--~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d--~~~l~~~ 473 (491)
... .+++..+++.|.+ .....++|..+........ .....+.+.+..++|.+.+.+.++.++++. .+.+.+.
T Consensus 421 ~~~~~~lf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~L~l~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~ 498 (520)
T 2jgp_A 421 DLSRNPLFDTVFTFQNST--EEVMTLPECTLAPFMTDETGQHAKFDLTFSATEEREEMTIGVEYSTSLFTRETMERFSRH 498 (520)
T ss_dssp CTTSCSSCSEEEEEECCC--CSCCCCSSEEEEECSSCSSCSBCSSSEEEEEEECSSCEEEEEEEETTTCCHHHHHHHHHH
T ss_pred CCCCCCcEEEEEEEecCC--CccccCCCceeEEeecCCCCcceeeeeEEEEEECCCeEEEEEEEChhhCCHHHHHHHHHH
Confidence 111 3344445555544 3345667766655432222 455679999999999999999999999963 6777888
Q ss_pred HHHHHHHHHH
Q 041931 474 LEESLHLIKT 483 (491)
Q Consensus 474 ~~~~l~~l~~ 483 (491)
|...|+++.+
T Consensus 499 ~~~lL~~l~~ 508 (520)
T 2jgp_A 499 FLTIAASIVQ 508 (520)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888877765
No 3
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.94 E-value=2.8e-25 Score=228.89 Aligned_cols=390 Identities=12% Similarity=0.072 Sum_probs=236.9
Q ss_pred CCCccCChhhhhccCCCCceEEEEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEE-eeecCCCccee
Q 041931 24 EENQPLSPMARMFHEPESNVYIVTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWV-PTKVNLDDHVI 102 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~-~~~~d~~~hv~ 102 (491)
+...|||++|+.||..+.+ +...++++|++|.++|++++...+.+||.||+++... .+.++.+ .+..+.. ++.
T Consensus 5 ~~~~pls~~Q~~~~~~~y~--~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~---~~~~~q~v~~~~~~~-~~~ 78 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVF--TSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQS---SDGGWNLVADDLLHS-GIC 78 (422)
T ss_dssp SEEEECCHHHHHHHHTTCE--EEEEEEEESCCCHHHHHHHHHHHHHHCGGGSEEEEEC---TTSSEEEEECCSSSC-CCE
T ss_pred ceeecCCHHHHHHHhcCce--EEEEEEEecCCCHHHHHHHHHHHHHhCccceEEEEec---CCcceeeeccCCCCC-ceE
Confidence 3458999999988743322 3456788999999999999999999999999999864 4455332 2333332 233
Q ss_pred eecCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcccCCC--
Q 041931 103 VPNLEPKLIDSPDKFVEDYTSSLSQTGIKMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSD-- 180 (491)
Q Consensus 103 ~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~~~~-- 180 (491)
+.++.... ..+++. + ..++||...|+|++.+++ . ++++.+++.+||+++||+|+..++.++...|..
T Consensus 79 ~~d~~~~~---~~~~~~----~-~~~~~d~~~pl~r~~l~~--~-~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~ 147 (422)
T 1q9j_A 79 VIDGTAAT---NGSPSG----N-AELRLDQSVSLLHLQLIL--R-EGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAV 147 (422)
T ss_dssp EEC--------------------CCCCCCTTTCSEEEEEEC--C-SSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC---cchhhh----c-ccCccCCCCCcEEEEEEe--c-CCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhh
Confidence 33332111 122221 2 357998557999999998 2 578999999999999999999999998876531
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCchHHHHHH--------------HHHHHHHHHHHHHHHHHhccccCCCCCCccCCCC
Q 041931 181 --PNEVPTIPSVTKKIDSNGHSKGFWPYLLFK--------------LWLFWNTLVDVVMFIATALMFVRDTKTPLKGELG 244 (491)
Q Consensus 181 --p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (491)
.... ..+... ...+..+.... .+.+|+..... . .. + +...+.. ...+
T Consensus 148 ~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~--~-~~-l-p~~~~~~---~~~~ 210 (422)
T 1q9j_A 148 TTGDPG-PITPQP--------TPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPA--T-ET-P-AVLAHPG---LPQA 210 (422)
T ss_dssp HSSSCC-CCCCCC--------CCBCHHHHHHHSSCCC-----CTTSSTTTTCC------------------CC---SBCC
T ss_pred ccCCCC-CCCCCC--------CCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCC--c-cc-C-CCCCCCC---CCCC
Confidence 1111 111100 00111110000 00112110000 0 00 0 0000100 0001
Q ss_pred CCCCCeEEEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeec
Q 041931 245 NGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLR 324 (491)
Q Consensus 245 ~~~~~r~~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR 324 (491)
. ....+.......++++++|+++|+|++++++||++.+|++| ...| . .++.+++|++.|
T Consensus 211 ~--~~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~l~r~-~~~~-----------------~-~~v~~g~~~~~R 269 (422)
T 1q9j_A 211 V--PVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQL-RNTP-----------------H-VPIPYVYPVDLR 269 (422)
T ss_dssp C--CEEEECCCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHH-HTCS-----------------S-CCEEEEEEEETT
T ss_pred c--cceEEEeCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc-ccCC-----------------C-ceEEEeeeeecc
Confidence 0 11222233334578999999999999999999999999998 1112 1 379999999999
Q ss_pred CCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCCC
Q 041931 325 PSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASFP 404 (491)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~ 404 (491)
...... -+.....|.+|.+...+|.....++.+.++++++++...+.+...... .+. +..+.......
T Consensus 270 ~~~~~~--------~~~~~~~~~vG~f~n~lp~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~--~l~-~~~i~~~~~~~- 337 (422)
T 1q9j_A 270 FVLAPP--------VAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQS--GLH-FGTAFEGTPPG- 337 (422)
T ss_dssp TTSSSC--------CCTTTBSCCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHTHHHHS--CCB-GGGGGGCCCSS-
T ss_pred cccCCC--------CChhhhhhhheeeeeeeeccCCCCHHHHHHHHHHHHHHHHhcCeeeec--ccc-hHHHhcccCCC-
Confidence 862100 000245677777777778764568999999999999887766543210 000 00111111110
Q ss_pred CcceEEEeccCCCccceEEcCceeeEeecc-ccCCCceeEEE-EEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q 041931 405 SETTLWFSNVMGPQEEISLYGYPIAYVAPS-CCGQPNGLMIH-VVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIK 482 (491)
Q Consensus 405 ~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~-~~~~~~~l~v~-v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~ 482 (491)
....++++|+++......++|..+..+... .......+.+. +.+++|.+.+.+ ++.+ .+++.+.+.|...|.++.
T Consensus 338 ~pl~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-y~~~--~~~~~l~~~~~~~L~~l~ 414 (422)
T 1q9j_A 338 LPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEH-HGHI--AEPGKSLEAIRSLLCTVP 414 (422)
T ss_dssp SCCCEEEECCCCCCSCCCCTTCEEEEEEEEECCBSSCCCCEEEEEEETTEEEEEE-ESSC--SSHHHHHHHHHHHHHHTT
T ss_pred CCceEEEecCCcCCCCCCCCCceeEeeecccccCCCCCceEEEEEeeCCeEEEEE-ecCc--cchHHHHHHHHHHHHHhh
Confidence 111678999987655556788888776653 22345567776 778999999999 9987 788899988888888775
Q ss_pred H
Q 041931 483 T 483 (491)
Q Consensus 483 ~ 483 (491)
+
T Consensus 415 ~ 415 (422)
T 1q9j_A 415 S 415 (422)
T ss_dssp T
T ss_pred c
Confidence 4
No 4
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=99.93 E-value=2.4e-24 Score=227.00 Aligned_cols=404 Identities=11% Similarity=0.004 Sum_probs=236.1
Q ss_pred CCCccCChhhhhcc-----CCCCceEE-EEEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEeeecCC
Q 041931 24 EENQPLSPMARMFH-----EPESNVYI-VTMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVPTKVNL 97 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~-----~~~~~v~~-~~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~~~~d~ 97 (491)
+...|||++|+.+| .+... |. ...++++|++|.++|++++.+.+.+||.||+++... .|.++++.+.. +
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g~ld~~~L~~A~~~lv~rh~~LRt~f~~~---~~~~~~v~~~~-~ 85 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSGRIDDDRLAAAADEVLDAFPLLRVNFVDD---DGLWMRTRENA-D 85 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEESSCCHHHHHHHHHHHHHHCGGGGEEEEES---SSEEEEECSCC-C
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeCCCCHHHHHHHHHHHHHhchhceeEEEcc---CCEEEEecCCC-C
Confidence 45689999999554 34444 54 477899999999999999999999999999999874 56677333433 3
Q ss_pred CcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcc
Q 041931 98 DDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 98 ~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
. +.+.++.... ..++++.+++.+...+|||+. .|+|++.+++. +++++.+++.+||+++||+|+..++.++..
T Consensus 86 ~--~~~~d~~~~~--~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~ 159 (493)
T 4hvm_A 86 A--LVRSDLRGHP--DPQARCVELLRADRDRPTDPERDPLVRLHLVRL--SETDVVLGVVAHQMLLDARSRYMVLGAVWQ 159 (493)
T ss_dssp C--EEEEECTTSS--SHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEEC--SSSEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred C--ceEEECCCCC--chHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEE--CCCcEEEEEecchhhccHHHHHHHHHHHHH
Confidence 3 3344443221 133789999999999999997 59999999985 257889999999999999999999999998
Q ss_pred cCCCCCCCC-CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccCC-CCCCCCCeEEEE
Q 041931 177 KVSDPNEVP-TIPSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGE-LGNGCLPRRFVH 254 (491)
Q Consensus 177 ~~~~p~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~ 254 (491)
.|. ....+ ....-. . -.+.. .-...........+|... +.. .+.. ...+ .........+..
T Consensus 160 ~Y~-g~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~W~~~------l~~------~~~l-~~~~~~~~~~~~~~~~l 222 (493)
T 4hvm_A 160 AYY-GRFRPAQYRDFA-E-VADFH-PLDRETVRVARHRWWSRR------LPA------LPVR-GGDGGPVGPPETSRLRV 222 (493)
T ss_dssp HHT-TCCCGGGSBCGG-G-TTTCC-TTCSHHHHHHHHHHHHHH------GGG------SCCC-C-------CCEEEEEEE
T ss_pred HhC-CCCCCcCHHHHH-H-HHhhh-hcccChhhHHHHHHHHHh------ccC------CCCC-CCCCCCCCCCeeEEEEc
Confidence 772 22111 000000 0 00000 000011111223345421 111 1111 1111 010000112223
Q ss_pred eeechHHHHHHHHHcCCc--chhHHHHHHHHHHHHHHHH----hcCcccccccccccCCCCCCCcceEEEEEeeecCCCC
Q 041931 255 RSVSLDDVKLVRNAMNTT--INDVMLGVTQAGLSRYLNR----KYGQLNIINGLSERNNNLPNNIRLRATFFMNLRPSAG 328 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~T--vNdvllAa~a~aL~~~~~~----~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~ 328 (491)
..-..+.++++|+++|+| ++.+++||++.+|++|... .+.+ .....+.+++|++.|...+
T Consensus 223 ~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~--------------~g~~dv~~g~~~~gR~~~~ 288 (493)
T 4hvm_A 223 PGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTG--------------TGKDSLYLSTEVDLRDHLQ 288 (493)
T ss_dssp EHHHHHHHHCC------CHHHHHHHHHHHHHHHC------------------------------CEEEEEEEEEHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccCc--------------CCCCCEEEEeeccCCCCcc
Confidence 333457788889999999 9999999999999999111 0000 0113799999999997543
Q ss_pred hhHHHHHhhcCCCCCCCceEEEEEeeeccCC--CCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHh--Hh-hcC-
Q 041931 329 IQELANMLKKGSKAKWGNQIGYIIFPFTIAL--RDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFC--NK-AAS- 402 (491)
Q Consensus 329 ~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~--~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~--~~-~~~- 402 (491)
.+..+|++++.+++.+..+. ..++.+.++++++++.....+ ..... .+.++. +.+ .+ ...
T Consensus 289 -----------~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~~h-~~p~~-~i~~~~-~~l~~~~~~~~~ 354 (493)
T 4hvm_A 289 -----------LGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAVVH-YLPYH-DVVDLA-VDLGVVTPPRVA 354 (493)
T ss_dssp -----------CCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHHHT-CCCHH-HHHHHH-HHTTSCBTTBTT
T ss_pred -----------hhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHHhh-cCCHH-HHHHHH-hhhCcccCCCCC
Confidence 24679999999999998875 578999999999999988887 55433 122210 011 11 111
Q ss_pred CCCcceEEEeccC------CCccceEEcCceeeEeec---cc--------------cCCCceeEEEEEEeCCEEEEEEEe
Q 041931 403 FPSETTLWFSNVM------GPQEEISLYGYPIAYVAP---SC--------------CGQPNGLMIHVVSYANKMTFVLSV 459 (491)
Q Consensus 403 ~~~~~~~~~SNvp------gp~~~l~~~G~~v~~~~~---~~--------------~~~~~~l~v~v~sy~~~l~~~v~~ 459 (491)
.++...+++.|.+ +....+...|..+..+.. ++ ...+..+.+.+..++|.+.+.+.+
T Consensus 355 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~~~~l~~~~~y 434 (493)
T 4hvm_A 355 ARWDVAVHLCRNAPSSSLTRGERTLAELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGELGEDMVIVLDQ 434 (493)
T ss_dssp GGGCEEECC--------------------CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEETTEEEEEEEE
T ss_pred cceeEEEEEEecCCccccccccccccCCCceeeeccccccccccccccccccccccccCCcceEEEEEEeCCeEEEEEEE
Confidence 2233334444433 222233455655554332 00 112223888888899999999999
Q ss_pred cCCCCC-CHHHHHHHHHHHHHHHHH
Q 041931 460 DDGLIP-DPHKLCDDLEESLHLIKT 483 (491)
Q Consensus 460 d~~~~~-d~~~l~~~~~~~l~~l~~ 483 (491)
+..+++ .++.+.+.|.+.|.++.+
T Consensus 435 ~~~l~~~~i~~l~~~~~~~L~~~~~ 459 (493)
T 4hvm_A 435 RRTHPAGGGSALLDGLDAAMAQAVA 459 (493)
T ss_dssp CC-------CHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHh
Confidence 998773 267788888888877754
No 5
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=99.92 E-value=1e-22 Score=212.68 Aligned_cols=406 Identities=13% Similarity=0.126 Sum_probs=240.6
Q ss_pred CCCccCChhhhhcc---CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCCC
Q 041931 24 EENQPLSPMARMFH---EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNLD 98 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~---~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~~ 98 (491)
+...|||+.|++|+ .+..+.|++ ..+++.|++|.++|++++...+.+||.||+++... .+.++++. +..+..
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~Al~~lv~rh~~LRt~f~~~---~~~~~q~v~~~~~~~ 91 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGFDPKVIQSVMDKIIEHHDALRMVYQHE---NGNVVQHNRGLGGQL 91 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCCCHHHHHHHHHHHHHHSGGGGEEEECG---GGCCEEEECCSSSCC
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCCCHHHHHHHHHHHHHhChHhheEEecC---CCceeeecccccccc
Confidence 44679999999443 344455543 67899999999999999999999999999999864 45676665 333455
Q ss_pred cceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHccc
Q 041931 99 DHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRK 177 (491)
Q Consensus 99 ~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~~ 177 (491)
.++.+.++.... +.++..+.+.+...+|||+. .|+|++.+++. . + +..+++.+||+++||+|+..++.++...
T Consensus 92 ~~~~~~d~~~~~---~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~-~-~-~~~l~l~~HH~i~Dg~S~~~l~~el~~~ 165 (466)
T 2xhg_A 92 YDFFSYNLTAQP---DVQQAIEAETQRLHSSMNLQEGPLVKVALFQT-L-H-GDHLFLAIHHLVVDGISWRILFEDLATG 165 (466)
T ss_dssp CEEEEEECTTCS---CHHHHHHHHHHHHHTTCCTTTCCCEEEEEEEE-T-T-EEEEEEEEEGGGCCHHHHHHHHHHHHHH
T ss_pred ceeEEEecCCcc---cHHHHHHHHHHHHHhccCCCCCCeEEEEEEEc-C-C-CCEEEEEeeeeeechhhHHHHHHHHHHH
Confidence 556666654322 33333333556678999996 59999999985 2 3 3458999999999999999999998876
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCchHHHHH--------HHHHHHHHHHHHHHHHHHhccccCCCCCCccCCCCC-C
Q 041931 178 VSDP--NEVPTIPSVTKKIDSNGHSKGFWPYLLF--------KLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGN-G 246 (491)
Q Consensus 178 ~~~p--~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (491)
|... ...+.++... .....+..+... ....+|... +.. . ..+.-|...+.+. .
T Consensus 166 Y~~~~~g~~~~l~~~~------~~y~~~~~~~~~~~~~~~~~~~~~~W~~~------l~~-~---~~~~lp~~~~~~~~~ 229 (466)
T 2xhg_A 166 YAQALAGQAISLPEKT------DSFQSWSQWLQEYANEADLLSEIPYWESL------ESQ-A---KNVSLPKDYEVTDCK 229 (466)
T ss_dssp HHHHHTTCCCCCCCCC------SCHHHHHHHHHHHTTSHHHHTTHHHHHHH------HHH-C---CCCCCCCSSCCSSCB
T ss_pred HHHHHcCCCCCCCCCC------CCHHHHHHHHHHHhcCccchhhhHHHHHh------hcc-C---CcccCCccccccccc
Confidence 5311 1111121111 000011111110 011233321 111 0 1111111111000 0
Q ss_pred CCCeEEEEeeech---HHHHHHH-HHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEee
Q 041931 247 CLPRRFVHRSVSL---DDVKLVR-NAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMN 322 (491)
Q Consensus 247 ~~~r~~~~~~~~l---~~vk~ia-~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVs 322 (491)
..........++. +.+++.| +++|+|++++++||++.+|++|.. . .++.+++|++
T Consensus 230 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~t~~~~llaa~~~~l~~~~~---~------------------~dv~ig~~~~ 288 (466)
T 2xhg_A 230 QKSVRNMRIRLHPEETEQLLKHANQAYQTEINDLLLAALGLAFAEWSK---L------------------AQIVIHLEGH 288 (466)
T ss_dssp GGGEEEEEEECCHHHHHHHHHTGGGTTTCCHHHHHHHHHHHHHHHHHC---C------------------SEEEEEEEEC
T ss_pred cccceEEEEEcCHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhC---C------------------CceEEEecCC
Confidence 0011112234443 4555545 568999999999999999999952 2 2799999999
Q ss_pred ecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhH-hhc
Q 041931 323 LRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCN-KAA 401 (491)
Q Consensus 323 lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~-~~~ 401 (491)
.|...... ++....+|++++.+++.+..+...++.+.++++++.+...++..- .+.+.+.+...-. .-.
T Consensus 289 gR~~~~~~-------~~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~ 358 (466)
T 2xhg_A 289 GREDIIEQ-------ANVARTVGWFTSQYPVLLDLKQTAPLSDYIKLTKENMRKIPRKGI---GYDILKHVTLPENRGSL 358 (466)
T ss_dssp CCCSCSTT-------CCCTTCCSCCCEEEEEEEECSCCCSHHHHHHHHHHHHHHSGGGGT---HHHHHHHTSCGGGSTTC
T ss_pred CCCccccC-------CCccccccceeeeccEEEecCCCCCHHHHHHHHHHHHHhCccCCc---ccceeeecccccccccc
Confidence 99863100 012457999999999998887556899999999999877533222 2222222111000 000
Q ss_pred CCCCcceEEEeccCCCccceEEcCceeeEeec---c-c---------cCCCceeEEEEEEeCCEEEEEEEecCCCCCC--
Q 041931 402 SFPSETTLWFSNVMGPQEEISLYGYPIAYVAP---S-C---------CGQPNGLMIHVVSYANKMTFVLSVDDGLIPD-- 466 (491)
Q Consensus 402 ~~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~---~-~---------~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d-- 466 (491)
.......+.|+..+.........+..+..+.. . + ......+.+.+...+|.+.+.+.++.+++..
T Consensus 359 ~~~~~p~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~y~~~~~~~~~ 438 (466)
T 2xhg_A 359 SFRVQPEVTFNYLGQFDADMRTELFTRSPYSGGNTLGADGKNNLSPESEVYTALNITGLIEGGELVLTFSYSSEQYREES 438 (466)
T ss_dssp CCCCCCSEEEEEEEECCTTCSSSSCEECTTCTTCCSSTTCTTSBCTTSBCCCSEEEEEEEETTEEEEEEEEETTTSCHHH
T ss_pred cccCCCeEEEeecCcccccccCCceecccccCccccCcccccccccccCcceeEEEEEEEECCEEEEEEEEChhhCCHHH
Confidence 01111224444332222222222322211110 0 0 1124568888888899999999999999953
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 041931 467 PHKLCDDLEESLHLIKTAS 485 (491)
Q Consensus 467 ~~~l~~~~~~~l~~l~~~a 485 (491)
++.+.+.|...|.++.+..
T Consensus 439 i~~l~~~~~~~L~~l~~~~ 457 (466)
T 2xhg_A 439 IQQLSQSYQKHLLAIIAHC 457 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 6777788888888776654
No 6
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.92 E-value=1.7e-23 Score=244.53 Aligned_cols=394 Identities=14% Similarity=0.137 Sum_probs=254.0
Q ss_pred CCccCChhhhhcc-----CCCCceEEE-EEEEeCCCCCHHHHHHHHHHHHhhccCCccceecccccCCceEEEe-eecCC
Q 041931 25 ENQPLSPMARMFH-----EPESNVYIV-TMIGFKSKINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP-TKVNL 97 (491)
Q Consensus 25 ~~~~Ls~~d~~~~-----~~~~~v~~~-~~~~~~~~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~-~~~d~ 97 (491)
...|||++|+.+| +++...|++ ..++++|++|.++|++++...+.+||.||+++... ..+.|+++- ++.++
T Consensus 11 d~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~l~~A~~~lv~rH~~LRt~f~~~--~~~~p~Q~v~~~~~~ 88 (1304)
T 2vsq_A 11 DMYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIKCLEESMNVIMDRYDVFRTVFIHE--KVKRPVQVVLKKRQF 88 (1304)
T ss_dssp EEEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEECS--SCSSCEEEEESCCCC
T ss_pred CcCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCCcCHHHHHHHHHHHHHhhhhceEEEEEc--CCCeEEEEECCCCCC
Confidence 3579999999554 566666654 67889999999999999999999999999999864 344576654 44444
Q ss_pred CcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CCceEEEEecccCCCCeeEEEEEecccccccccHHHHHHHHcc
Q 041931 98 DDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKMS-MPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 98 ~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~~-~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
.. .+.++.....+..++++++++.+...+|||++ .|+|++.+++. +++++.+++.+||+++||+|+..++.++..
T Consensus 89 ~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HHii~DG~S~~~l~~el~~ 164 (1304)
T 2vsq_A 89 HI--EEIDLTHLTGSEQTAKINEYKEQDKIRGFDLTRDIPMRAAIFKK--AEESFEWVWSYHHIILDGWCFGIVVQDLFK 164 (1304)
T ss_dssp CE--EEEECTTSCHHHHHHHHHHHHHHHHHHCCCTTTSCSEEEEEEEE--ETTEEEEEEEEEGGGCCHHHHHHHHHHHHH
T ss_pred ce--EEEECCCCCchhHHHHHHHHHHHHhcCCCCCCCCCcEEEEEEEE--CCCcEEEEEecCceeechhhHHHHHHHHHH
Confidence 32 23333211100014578889999999999997 49999999985 257899999999999999999999999887
Q ss_pred cCCCC--CCCCCCCCCCCCCCCCCCCCCchHHHH----HHHHHHHHHHHHHHHHHHHhccccCCCCCCccC---CCCCCC
Q 041931 177 KVSDP--NEVPTIPSVTKKIDSNGHSKGFWPYLL----FKLWLFWNTLVDVVMFIATALMFVRDTKTPLKG---ELGNGC 247 (491)
Q Consensus 177 ~~~~p--~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 247 (491)
.|... ...+.+|... ....|..+.. .....+|+.. +.. .. +...+.. +.....
T Consensus 165 ~Y~~~~~g~~~~l~~~~-------~y~d~~~~~~~~~~~~~~~yW~~~------L~~----~~-~~~~lp~~~~~~~~~~ 226 (1304)
T 2vsq_A 165 VYNALREQKPYSLPPVK-------PYKDYIKWLEKQDKQASLRYWREY------LEG----FE-GQTTFAEQRKKQKDGY 226 (1304)
T ss_dssp HHHHHHTTCCCCCCCCC-------CTHHHHHHHHTSCHHHHHHHHHHH------HTT----CC-CCCTTTTTCCCSSCCC
T ss_pred HHHHhhcCCCCCCCCcc-------cHHHHHHHHhcchhhHHHHHHHHH------hCC----CC-ccccCCCCCCcccccc
Confidence 66320 0111111110 0111111110 1112234321 111 01 1111111 100000
Q ss_pred CCeE--EEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecC
Q 041931 248 LPRR--FVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRP 325 (491)
Q Consensus 248 ~~r~--~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~ 325 (491)
.... +.......++++++|+++|+|+|.+++||++..|++|.. . +++.+++|++.|.
T Consensus 227 ~~~~~~~~l~~~~~~~L~~~a~~~~~T~~~vllaa~a~~L~r~tg---~------------------~dvv~G~pvsgR~ 285 (1304)
T 2vsq_A 227 EPKELLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRYQQ---S------------------GDLAFGTVVSGRP 285 (1304)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT---C------------------SEEEEEEEECCCC
T ss_pred CcceEEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC---C------------------CCEEEEEEeCCCC
Confidence 1111 112233357899999999999999999999999999963 2 2799999999998
Q ss_pred C--CChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCC
Q 041931 326 S--AGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASF 403 (491)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~ 403 (491)
. .+. +..+|++++.+.+++..+...++.+.|+++++++.....+....+. .+ .+.+. ...
T Consensus 286 ~~~~~~-----------~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~----~i-~~~l~--~~~ 347 (1304)
T 2vsq_A 286 AEIKGV-----------EHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLY----DI-QSQAD--QPK 347 (1304)
T ss_dssp TTSTTG-----------GGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHH----HH-HHSSS--CSS
T ss_pred ccchhh-----------hcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHH----HH-HHHhC--CCc
Confidence 6 332 3468999999999998875678999999999999888887665433 11 12111 123
Q ss_pred CCcceEEEeccCCCc---cceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCC--HHHHHHHHHHHH
Q 041931 404 PSETTLWFSNVMGPQ---EEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPD--PHKLCDDLEESL 478 (491)
Q Consensus 404 ~~~~~~~~SNvpgp~---~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d--~~~l~~~~~~~l 478 (491)
+++..+++.|.+... ......|..+..+... ......+++.+ ..++.+.+.+.++.++++. .+.+.+.|...|
T Consensus 348 lf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~dL~l~~-~~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL 425 (1304)
T 2vsq_A 348 LIDHIIVFENYPLQDAKNEESSENGFDMVDVHVF-EKSNYDLNLMA-SPGDEMLIKLAYNENVFDEAFILRLKSQLLTAI 425 (1304)
T ss_dssp SCCCEEEECSSCHHHHSCCCHHHHSEEEEEEEEC-CCCCSSEEEEE-ECSSSCEEEEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred ccceeEEEeecccccccccccccCCceeEeeecc-cccccCeEEEE-ecCCcEEEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 445567777865211 1112234444443222 23345677765 4588999999999999963 667777777777
Q ss_pred HHHHH
Q 041931 479 HLIKT 483 (491)
Q Consensus 479 ~~l~~ 483 (491)
+++.+
T Consensus 426 ~~l~~ 430 (1304)
T 2vsq_A 426 QQLIQ 430 (1304)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 77754
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=99.65 E-value=2.7e-13 Score=142.31 Aligned_cols=411 Identities=12% Similarity=0.012 Sum_probs=205.4
Q ss_pred CccCChhhhhcc------CCCCceEEEEEEEeCCC----CCHHHHHHHHHHHH----hhccCCccceecccccCCceEEE
Q 041931 26 NQPLSPMARMFH------EPESNVYIVTMIGFKSK----INPEVVKANLEHSL----LKHRRFSSLQVVDEKIEGGLKWV 91 (491)
Q Consensus 26 ~~~Ls~~d~~~~------~~~~~v~~~~~~~~~~~----ld~~~l~~~l~~~~----~~~p~lr~~v~~~~~~~~~p~w~ 91 (491)
.|++...+..+. +....+++.+.+++..+ ++.+.|.+.+++.+ -.||.+-+++..+ ..+.+.|+
T Consensus 30 ~R~~~g~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~~l~~~lr~AW~~lR~~hP~iA~~v~~d--~~~~~~~~ 107 (519)
T 3fot_A 30 QRRCVGAEAIVGLEEKNRRALYDLYIATSLRNIAPASTLLTLQNLKEMFELALLDARFEHPECACTVSWD--DEVPAIIT 107 (519)
T ss_dssp EEECCTHHHHHHCHHHHTTTTTCEEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHCGGGGCEEECC--SSSSCEEE
T ss_pred EeecCccHHHHHHhhhcCCCcceEEEEEEEEecCCCCccccHHHHHHHHHHHHHHHHhhCCcceeEEeeC--CCCcccEE
Confidence 688899998775 34566777677776544 34455555555544 3699999998754 12222222
Q ss_pred --e--eecCCCcc----eeeecCCCCCCCCcHHHHHHHH--HHhhcCCCCCCCCceEEEEecccCC-----CC--eeEEE
Q 041931 92 --P--TKVNLDDH----VIVPNLEPKLIDSPDKFVEDYT--SSLSQTGIKMSMPMWDLHLLNIKTS-----DA--ESVAV 154 (491)
Q Consensus 92 --~--~~~d~~~h----v~~~~l~~~~~~~~~~~l~~~i--~~~~~~p~d~~~PlW~~~lv~~~~~-----~~--~~~lv 154 (491)
. .+-+++.. +.++.. .. +.+++..-+ .+....-..+. +.+.+++|..... .+ +..|+
T Consensus 108 Y~~~~~~~~~~~Wl~~Tf~v~~~--~~---t~~e~~~~~~~~r~~~~~~~p~-~~~~l~~v~~~~~~~~~~p~~~~~~lv 181 (519)
T 3fot_A 108 YESPESNESARDWARGCIHVQPT--AK---SALDLWSEMEEGRAAANDNTPS-KSIELFLLSDVSTDSTPIPQDATVEIL 181 (519)
T ss_dssp EECCSSHHHHHHHHHHHEEEEEC--SC---CHHHHHHHHHHHHHHTC-CCCC-CSCEEEEEESSSSTTSCCCTTCEEEEE
T ss_pred EecCCCHHHHHHHHHhcEEEeCC--CC---CHHHHHHhhhhhhcccccCCCc-cceEEEEEeccccccccCCCCceEEEE
Confidence 1 11122211 111110 11 333332111 11111111123 7899999854321 23 78899
Q ss_pred EEecccccccccHHHHHHHHcccCCCCC------CCCCCCCCCCCCCCCCC---CCCc-hH----HHHHHHHHHHHHHHH
Q 041931 155 LRVHHSLGDGTSLMSLLLACCRKVSDPN------EVPTIPSVTKKIDSNGH---SKGF-WP----YLLFKLWLFWNTLVD 220 (491)
Q Consensus 155 ~~~HH~l~DG~s~~~l~~~l~~~~~~p~------~~~~~p~~~~~~~~~~~---~~~~-~~----~~~~~~~~~~~~~~~ 220 (491)
|++||.++||+|+..++..+++...++. ..+.+.+.......-+. ..++ .. .....+......+
T Consensus 182 ~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~-- 259 (519)
T 3fot_A 182 FHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSAL-- 259 (519)
T ss_dssp EEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHH--
T ss_pred EEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHh--
Confidence 9999999999999999998887543321 11222111000000000 0111 00 0111111111111
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCCCCCeEEEEeee---chHHHHHHHHHc---CCcchhHHHHHHHHHHHHHHHHhcC
Q 041931 221 VVMFIATALMFVRDTKTPLKGELGNGCLPRRFVHRSV---SLDDVKLVRNAM---NTTINDVMLGVTQAGLSRYLNRKYG 294 (491)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~l~~vk~ia~~~---g~TvNdvllAa~a~aL~~~~~~~g~ 294 (491)
.... .. + ..|++...+. .+ .....+ ..+++++.||++ |+|||.++.||++.++.++....+.
T Consensus 260 -~~~~-~~--~----~~P~~~~~~~---~~-~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~ 327 (519)
T 3fot_A 260 -VANY-KS--R----GMKFQPGLAL---PR-CVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDL 327 (519)
T ss_dssp -HHHH-HS--C----CSBCCCCCCC---EE-EEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----C
T ss_pred -hcCC-Cc--c----cCCCCCCCCC---cc-eEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCccc
Confidence 0100 10 1 1122221121 22 233334 467888889999 9999999999999999987532111
Q ss_pred cccccccccccCCCCCCCcceEEEEEeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCC----CCCHHHH----
Q 041931 295 QLNIINGLSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIAL----RDDPLDY---- 366 (491)
Q Consensus 295 ~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~----~~~~~~r---- 366 (491)
+....+.+.+|||+|+....+. + ..-.|.....+.+.++.-. ..++.+.
T Consensus 328 ---------------~~~~~~~~~~pvnlR~~l~~~~---~-----~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~ 384 (519)
T 3fot_A 328 ---------------SDDEVFISPTSVDGRRWLREDI---A-----SNFYAMCQTAAVVRIENLKSITVSHKDEKELQVR 384 (519)
T ss_dssp ---------------CTTCCEEEEEEEECGGGBCHHH---H-----TSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHH
T ss_pred ---------------CCCccEEEEeeeeccccCCCcc---c-----ccccceeeeeeeeEecCccccccccchhhhhhHh
Confidence 2223689999999999754310 0 0113555566666665420 1112222
Q ss_pred -HHHHHHHHHHHHhch-hhhHHHHH---HH-HHHHHhHhhc-CCCCcceEEEeccCCCc--cceEEc-------CceeeE
Q 041931 367 -LREAKVAMDRKKASL-EASFSYFL---SK-SFLKFCNKAA-SFPSETTLWFSNVMGPQ--EEISLY-------GYPIAY 430 (491)
Q Consensus 367 -l~~v~~~~~~~k~~~-~~~~~~~~---~~-~l~~~~~~~~-~~~~~~~~~~SNvpgp~--~~l~~~-------G~~v~~ 430 (491)
+..+.+.+++..... .......+ .+ .+..++.... ..-...+..+||++--. -+-.++ ..+|++
T Consensus 385 ~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~lp~~y~~~~~~~~~~~V~~ 464 (519)
T 3fot_A 385 ALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEIKQTATGENVLSVES 464 (519)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSCSEEEETTTTEEEEEEEE
T ss_pred HHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCCccCcccccCCccccccchhhccccCCCCceEEEE
Confidence 222222222211110 00011111 11 1111221111 11113467899987544 334454 257777
Q ss_pred eeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q 041931 431 VAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIK 482 (491)
Q Consensus 431 ~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~ 482 (491)
+.+........+.+.+.||+|+|+|+++++...+ +.+...+.+++-.+.|.
T Consensus 465 ~~~~~~~~~~~~~~~~~Tf~g~L~l~~~yn~a~~-~~e~v~~~l~~v~~~L~ 515 (519)
T 3fot_A 465 IDFVVNQSLPYLAIRLDSWRDASTLNIIYNDANY-TEAEVQKYLQSIVEFML 515 (519)
T ss_dssp EEEEECCCSSSCEEEEEEETTEEEEEEEEETTTC-CHHHHHHHHHHHHHHHH
T ss_pred EEEEccccCCceEEEEEEECCEEEEEEEeccccC-CHHHHHHHHHHHHHHHH
Confidence 7664322344678999999999999999998777 55555555555444443
No 8
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=98.30 E-value=3.1e-05 Score=79.30 Aligned_cols=276 Identities=11% Similarity=0.116 Sum_probs=144.4
Q ss_pred CccCChhhhhccCCCCceEEEEEEEeCCC--C----CHHHHHHHHHHHHhhccCCccceecccc---cCCceEEEe--ee
Q 041931 26 NQPLSPMARMFHEPESNVYIVTMIGFKSK--I----NPEVVKANLEHSLLKHRRFSSLQVVDEK---IEGGLKWVP--TK 94 (491)
Q Consensus 26 ~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~--l----d~~~l~~~l~~~~~~~p~lr~~v~~~~~---~~~~p~w~~--~~ 94 (491)
..+||++|+.. +..++..+..|..... . ..+.|+++|.+.+..++.|.=|+..... ...+-.++. .+
T Consensus 25 ~~~LS~lD~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~i~c~~~Gv~fv~A~~d 102 (421)
T 2bgh_A 25 CYKISHLDQLL--LTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQ 102 (421)
T ss_dssp CCBCCHHHHTS--CSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEETTTEEECCCCCEEEEEEEES
T ss_pred ccCCChHHhcc--cccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccCCCcEEEEcCCceEEEEEEEc
Confidence 57899999852 3345555555654322 1 3588999999999999988888753110 122334444 33
Q ss_pred cCCCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCC-------CCCCCceEEEEecccCCCCeeEEEEEecccccccccH
Q 041931 95 VNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGI-------KMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSL 167 (491)
Q Consensus 95 ~d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~-------d~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s~ 167 (491)
.+++++... . + +...++ ++..... ..+.|+..+.+-.- . .|+.+|-+.+||+++||.|+
T Consensus 103 ~~l~~~~~~--~--p----~~~~~~----~l~p~~~~~~~~~~~~~~pll~vQvt~f-~-cgG~~lg~~~~H~v~Dg~~~ 168 (421)
T 2bgh_A 103 AQLSQAIQN--V--V----ELEKLD----QYLPSAAYPGGKIEVNEDVPLAVKISFF-E-CGGTAIGVNLSHKIADVLSL 168 (421)
T ss_dssp SCHHHHHSC--C--S----SGGGGG----GGSSSCSSSSSSSCCCTTCSEEEEEEEC-T-TSCEEEEEEEETTTCCHHHH
T ss_pred CCHHHHhcc--C--C----ChHHHH----hcCCCCCCccccccccCCceEEEEEEEE-c-CCCEEEEEEeeEEechHHHH
Confidence 333332210 0 1 111222 2221111 12368876666543 2 27899999999999999999
Q ss_pred HHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccCCCCCCC
Q 041931 168 MSLLLACCRKVSDPNEVPTIPSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGC 247 (491)
Q Consensus 168 ~~l~~~l~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (491)
..++......+.. ...+ . .+. +.+. .. +.. ....+..+. .......
T Consensus 169 ~~fl~~wa~~~rg-~~~~-~-~P~------------~dr~-~~--------------l~p---~~~~~~~~~-~~~~~~~ 214 (421)
T 2bgh_A 169 ATFLNAWTATCRG-ETEI-V-LPN------------FDLA-AR--------------HFP---PVDNTPSPE-LVPDENV 214 (421)
T ss_dssp HHHHHHHHHHHTT-CSCC-C-CCB------------CSHH-HH--------------HSC---CCTTCCCCC-CCCCSSE
T ss_pred HHHHHHHHHHhcC-CCCC-C-CCc------------cccc-cc--------------cCC---CcccCCCCc-cCCccce
Confidence 9999865543211 1111 1 110 0000 00 000 000110010 0000001
Q ss_pred CCeEEEEeeechHHHHHHHHH----cCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeee
Q 041931 248 LPRRFVHRSVSLDDVKLVRNA----MNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNL 323 (491)
Q Consensus 248 ~~r~~~~~~~~l~~vk~ia~~----~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVsl 323 (491)
..+.+....-.++++|+.+.. ..+|-+|++.|.+-.++.+-...... ++ ...++.++||+
T Consensus 215 ~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~---------------~~-~~~~l~~~vd~ 278 (421)
T 2bgh_A 215 VMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYG---------------AK-NKFVVVQAVNL 278 (421)
T ss_dssp EEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSC---------------CC-SCEEEEEEEES
T ss_pred EEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCC---------------CC-CceEEEEEecC
Confidence 122333334445555554433 24899999999777766655432211 12 37899999999
Q ss_pred cCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHH
Q 041931 324 RPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMD 375 (491)
Q Consensus 324 R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~ 375 (491)
|...+.+ -++...||.+.......+.++..+....+..+++.++
T Consensus 279 R~rl~pp--------lP~~y~GN~~~~~~~~~~~~~~~~l~~~a~~ir~ai~ 322 (421)
T 2bgh_A 279 RSRMNPP--------LPHYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLE 322 (421)
T ss_dssp GGGSSSC--------CCTTBCSCCEEEEEEEECTTCCCCGGGGHHHHHHHTC
T ss_pred ccccCCC--------CCCCccceEEEEEEEEecccccccHHHHHHHHHHHHH
Confidence 9864311 1356799999888888777532233333444444433
No 9
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=98.06 E-value=0.00015 Score=74.51 Aligned_cols=135 Identities=15% Similarity=0.103 Sum_probs=80.3
Q ss_pred CCCccCChhhhhccCCCCceEEEEEEEeCC---CCCHHHHHHHHHHHHhhccCCccceecccccCCceE---------EE
Q 041931 24 EENQPLSPMARMFHEPESNVYIVTMIGFKS---KINPEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLK---------WV 91 (491)
Q Consensus 24 ~~~~~Ls~~d~~~~~~~~~v~~~~~~~~~~---~ld~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~---------w~ 91 (491)
....+||++|+.+. ..++..+..|...+ ....+.|+++|.+.+..++.|-=|+...+ .|+++ ++
T Consensus 24 ~~~~~LS~lD~~~~--~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~--~g~~~i~c~~~Gv~fv 99 (439)
T 4g22_A 24 GRNLWNSNVDLVVP--NFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDE--DGRIEIECNGEGVLFV 99 (439)
T ss_dssp CCEECCCHHHHSCC--TTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECT--TSCEEEECCCCCEEEE
T ss_pred CCeecCChhHhCcc--ccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCC--CCCEEEEECCCCCEEE
Confidence 34578999999742 33444455566532 13468999999999999998888887542 23332 22
Q ss_pred e--eecCCCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCC---CCCCceEEEEecccCCCCeeEEEEEeccccccccc
Q 041931 92 P--TKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIK---MSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTS 166 (491)
Q Consensus 92 ~--~~~d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d---~~~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG~s 166 (491)
. .+.+++++-. .. ....+++++ ...+.+ .+.|+..+.+-.- . .|+.+|-+.+||+++||.|
T Consensus 100 ~A~~d~~l~~l~~------~~---p~~~~~~l~---p~~~~~~~~~~~pll~vQvT~f-~-cGG~~lg~~~~H~v~Dg~~ 165 (439)
T 4g22_A 100 EAESDGVVDDFGD------FA---PTLELRRLI---PAVDYSQGISSYALLVLQVTYF-K-CGGVSLGVGMRHHAADGFS 165 (439)
T ss_dssp EEEESSCGGGGTT------CC---CCGGGGGGS---CCCCTTSCTTSSCSEEEEEEEC-T-TSCEEEEEEECTTTCCHHH
T ss_pred EEEcCCcHHHhcC------CC---CCHHHHhcC---CCCCcccccccCceeEEEEEEe-c-CCCEEEEEEeeeccCcHHH
Confidence 2 1222222211 00 111222221 011111 1358777666543 2 3789999999999999999
Q ss_pred HHHHHHHHcc
Q 041931 167 LMSLLLACCR 176 (491)
Q Consensus 167 ~~~l~~~l~~ 176 (491)
+..|+.....
T Consensus 166 ~~~Fl~~wa~ 175 (439)
T 4g22_A 166 GLHFINSWSD 175 (439)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999986554
No 10
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=97.98 E-value=0.00068 Score=69.87 Aligned_cols=280 Identities=10% Similarity=0.010 Sum_probs=141.9
Q ss_pred CccCChhhhhccCCCCceEEEEEEEeCCCCC------HHHHHHHHHHHHhhccCCccceecccccCCceEEEeeecCCCc
Q 041931 26 NQPLSPMARMFHEPESNVYIVTMIGFKSKIN------PEVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVPTKVNLDD 99 (491)
Q Consensus 26 ~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~ld------~~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~~~~d~~~ 99 (491)
..+||++|+.++ ...++..+..|..+...+ .+.|+++|.+.+..++.|.=|+...+-..|+++..-.+- .
T Consensus 21 ~~~LS~lD~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~---~ 96 (453)
T 2xr7_A 21 TLPLTYFDHVWL-AFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTG---N 96 (453)
T ss_dssp EEECCHHHHGGG-GSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTTCCCEEEEETT---C
T ss_pred eECCCHHHhhhh-hcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCCCCEEEEecCC---C
Confidence 468999999765 223455556676543211 478999999999999999888875420023332211100 0
Q ss_pred ceeeecCCCCCCCCcHHHHHH-------HHHHhhcCCCCC---C-----CCceEEEEecccCCCCeeEEEEEeccccccc
Q 041931 100 HVIVPNLEPKLIDSPDKFVED-------YTSSLSQTGIKM---S-----MPMWDLHLLNIKTSDAESVAVLRVHHSLGDG 164 (491)
Q Consensus 100 hv~~~~l~~~~~~~~~~~l~~-------~i~~~~~~p~d~---~-----~PlW~~~lv~~~~~~~~~~lv~~~HH~l~DG 164 (491)
=|.++.-.... +-+++.. .+..+.. ..+. . .|+..+.+-.- . .|+.+|-+.+||+++||
T Consensus 97 gv~fv~A~~~~---~l~~l~~~~~~~~~~~~~l~p-~~~~~~~~~~~~~~pll~vQvT~f-~-cGG~~lg~~~~H~v~Dg 170 (453)
T 2xr7_A 97 SVSVIFSESDM---DFNYLIGYHPRNTKDFYHFVP-QLAEPKDAPGVQLAPVLAIQVTLF-P-NHGISIGFTNHHVAGDG 170 (453)
T ss_dssp CCEEEEEECCS---CHHHHTCSSCCCGGGGGGGSC-CCCCCEEETTEEECCCEEEEEEEE-T-TTEEEEEEEECTTTCCS
T ss_pred ceEEEEEecCC---CHHHhhccCCCChhhhhcCCC-CCCCcccccccccCCeEEEEEEEc-c-CCcEEEEEeeeeeeech
Confidence 01111000000 1111100 0011111 1111 1 57665555432 2 26899999999999999
Q ss_pred ccHHHHHHHHcccCC--C-CC-CCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC-C
Q 041931 165 TSLMSLLLACCRKVS--D-PN-EVPT-IPSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFVRDTKT-P 238 (491)
Q Consensus 165 ~s~~~l~~~l~~~~~--~-p~-~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (491)
.|+..|+......+. . +. ..+. .|... |....+. .. +... .+ .. +...+.. +
T Consensus 171 ~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~d-r~~l~~p-~~----~~~~-------------~~-~~--~~~~~~~~~ 228 (453)
T 2xr7_A 171 ATIVKFVRAWALLNKFGGDEQFLANEFIPFYD-RSVIKDP-NG----VGMS-------------IW-NE--MKKYKHMMK 228 (453)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCC-CSSSCCS-SC----HHHH-------------TT-TT--GGGCTTTSC
T ss_pred hHHHHHHHHHHHHhhcCCCcccCCCCCCCccc-cccccCC-CC----cchH-------------HH-Hh--ccccCCccc
Confidence 999999986543321 1 10 0011 11111 1000000 01 0000 00 00 0000100 0
Q ss_pred c-cCCCCCCCCCeEEEEeeechHHHHHHHHH-----cCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCC
Q 041931 239 L-KGELGNGCLPRRFVHRSVSLDDVKLVRNA-----MNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNN 312 (491)
Q Consensus 239 ~-~~~~~~~~~~r~~~~~~~~l~~vk~ia~~-----~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~ 312 (491)
. ..........+.|....-.++++|+.+.. ..+|-+|++.|.+-.++.+-....... -.++
T Consensus 229 ~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~------------~~~~- 295 (453)
T 2xr7_A 229 MSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEE------------IDEN- 295 (453)
T ss_dssp CSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCC------------CCTT-
T ss_pred cccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhcccccc------------CCCC-
Confidence 0 00001111245666667777888877654 248999999998777766654321000 0022
Q ss_pred cceEEEEEeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccC
Q 041931 313 IRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIA 358 (491)
Q Consensus 313 ~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 358 (491)
...++.++||+|...+.+ -++...||.+....+..+.+
T Consensus 296 ~~~~l~~~vd~R~rl~pp--------lP~~Y~GN~~~~~~~~~~~~ 333 (453)
T 2xr7_A 296 GMEFFGCAADCRAQFNPP--------LPPSYFGNALVGYVARTRQV 333 (453)
T ss_dssp SEEEEEEECCTTSCSSSC--------CCTTBCSCCCCEEEEEEEHH
T ss_pred cceEEEEEecccccCCCC--------CCcccccceeeeeeeeeeHH
Confidence 378999999999975411 14567999998777777664
No 11
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=97.92 E-value=0.002 Score=66.43 Aligned_cols=262 Identities=13% Similarity=0.093 Sum_probs=136.1
Q ss_pred CccCChhhhhccCCCCceEEEEEEEeCCC----C--CHHHHHHHHHHHHhhccCCcccee-cccccCCceE---------
Q 041931 26 NQPLSPMARMFHEPESNVYIVTMIGFKSK----I--NPEVVKANLEHSLLKHRRFSSLQV-VDEKIEGGLK--------- 89 (491)
Q Consensus 26 ~~~Ls~~d~~~~~~~~~v~~~~~~~~~~~----l--d~~~l~~~l~~~~~~~p~lr~~v~-~~~~~~~~p~--------- 89 (491)
..+||+.|+.++.. .++..+..|..... . ..+.|+++|.+.+..++.|.=|+. ..+ ..|+++
T Consensus 26 ~~~LS~lD~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~-~~g~~~i~c~~~~gv 103 (454)
T 2e1v_A 26 SLQLTFFDFFWLRS-PPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPA-PTKKPEICYVEGDSV 103 (454)
T ss_dssp EEECCHHHHTTTTC-CCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSS-SSSCCEEEECTTCCE
T ss_pred eecCchHHhhhhcc-CCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeeeccC-CCCCEEEEECCCCcE
Confidence 46899999976422 34555566665432 1 147899999999999999888887 321 122222
Q ss_pred -EEe--eecCCCcceeeecCCCCCCCCcHHHHHHHHHHhhcCCCCC--------CCCceEEEEecccCCCCeeEEEEEec
Q 041931 90 -WVP--TKVNLDDHVIVPNLEPKLIDSPDKFVEDYTSSLSQTGIKM--------SMPMWDLHLLNIKTSDAESVAVLRVH 158 (491)
Q Consensus 90 -w~~--~~~d~~~hv~~~~l~~~~~~~~~~~l~~~i~~~~~~p~d~--------~~PlW~~~lv~~~~~~~~~~lv~~~H 158 (491)
++. .+.++++ +.... +.....+. .+.. ..+. +.|+..+.+-.- . .|+.+|-+.+|
T Consensus 104 ~fv~A~~~~~l~~------l~~~~-~~~~~~~~----~l~p-~~~~~~~~~~~~~~pll~vQvT~f-~-cgG~~lg~~~~ 169 (454)
T 2e1v_A 104 AVTFAECNLDLNE------LTGNH-PRNCDKFY----DLVP-ILGESTRLSDCIKIPLFSVQVTLF-P-NQGIAIGITNH 169 (454)
T ss_dssp EEEEEEECSCGGG------TSSSS-CEEGGGGG----GGSC-CCCCCEECSSCEEEECEEEEEEEE-T-TTEEEEEEEEC
T ss_pred EEEEEEeCCCHHH------hcCCC-CCcchhhh----cCCC-CCCCcccccccccCceEEEEEEEe-c-CCcEEEEEEee
Confidence 222 1111111 10000 00111221 1211 1111 126665554432 2 26899999999
Q ss_pred ccccccccHHHHHHHHcccCCCCCC-----CCCC-CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 041931 159 HSLGDGTSLMSLLLACCRKVSDPNE-----VPTI-PSVTKKIDSNGHSKGFWPYLLFKLWLFWNTLVDVVMFIATALMFV 232 (491)
Q Consensus 159 H~l~DG~s~~~l~~~l~~~~~~p~~-----~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (491)
|+++||.|+..++......+..... .+.. |... | +++... +. ... ... . ..
T Consensus 170 H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~d-r---------~l~~p~--~~---~~~------~~~-~-~~ 226 (454)
T 2e1v_A 170 HCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYD-R---------IIKYPM--LD---EAY------LKR-A-KV 226 (454)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCC-C---------CCCCHH--HH---HHH------HHH-T-TC
T ss_pred eeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCccc-c---------cCCCCC--cc---hHH------HHh-h-hc
Confidence 9999999999999865543210110 0011 1111 1 011111 10 000 000 0 00
Q ss_pred CC------CCCCccCCCCCCCCCeEEEEeeechHHHHHHHHHc-----CCcchhHHHHHHHHHHHHHHHHhcCccccccc
Q 041931 233 RD------TKTPLKGELGNGCLPRRFVHRSVSLDDVKLVRNAM-----NTTINDVMLGVTQAGLSRYLNRKYGQLNIING 301 (491)
Q Consensus 233 ~~------~~~~~~~~~~~~~~~r~~~~~~~~l~~vk~ia~~~-----g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~ 301 (491)
.. +.. +. ... ....+.+....-.++++|+.+... .+|-+|++.|.+-.++.+-. .
T Consensus 227 ~~~~~~~~~~~-~~-~~~-~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar----~------- 292 (454)
T 2e1v_A 227 ESFNEDYVTQS-LA-GPS-DKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR----N------- 292 (454)
T ss_dssp TTHHHHCCCCC-CC-CCC-CEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH----C-------
T ss_pred cccccccCccc-CC-CCC-CceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc----C-------
Confidence 00 111 11 111 011234444555566777666542 48999999887776665543 2
Q ss_pred ccccCCCCCCCcceEEEEEeeecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccC
Q 041931 302 LSERNNNLPNNIRLRATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIA 358 (491)
Q Consensus 302 ~~~~~~~~p~~~~l~~~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 358 (491)
+ ...++.++||+|+..+.+ -++...||.+....+..+.+
T Consensus 293 ---------~-~~~~l~~~vd~R~rl~pp--------lP~~Y~GN~~~~~~~~~~~~ 331 (454)
T 2e1v_A 293 ---------D-KLQLFGFPIDRRARMKPP--------IPTAYFGNCVGGCAAIAKTN 331 (454)
T ss_dssp ---------C-SEEEEEEEEECGGGSSSC--------CCTTBCSCCEEEEEEEEEGG
T ss_pred ---------C-CceEEEEEecchhccCCC--------CCcccccceeeeEEeecchh
Confidence 1 278999999999864311 14567999998888777775
No 12
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=97.75 E-value=0.011 Score=60.79 Aligned_cols=143 Identities=9% Similarity=0.021 Sum_probs=76.8
Q ss_pred ccCChhhhhccCCCCceEEEEEEEeCCCCC----HHHHHHHHHHHHhhccCCccceecccc---cCCceEEEe-eecCCC
Q 041931 27 QPLSPMARMFHEPESNVYIVTMIGFKSKIN----PEVVKANLEHSLLKHRRFSSLQVVDEK---IEGGLKWVP-TKVNLD 98 (491)
Q Consensus 27 ~~Ls~~d~~~~~~~~~v~~~~~~~~~~~ld----~~~l~~~l~~~~~~~p~lr~~v~~~~~---~~~~p~w~~-~~~d~~ 98 (491)
.+||.+|+...-+..++..+..|....+.+ .+.|+++|.+.+..++-|-=|++..+. ..|.+ .+. .+ ...
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~-~i~~~~-~~~ 82 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTS-FIVPFE-DVP 82 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEE-EEECCC-SSC
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcE-EEeecC-CCC
Confidence 478888875311223444555566432211 477999999999999988888875421 12323 222 11 111
Q ss_pred cceeeecCCCC-CCCCcHHHHHHH------H-HHhh-c---CCC------CCCCCceEEEEecccCCCCeeEEEEEeccc
Q 041931 99 DHVIVPNLEPK-LIDSPDKFVEDY------T-SSLS-Q---TGI------KMSMPMWDLHLLNIKTSDAESVAVLRVHHS 160 (491)
Q Consensus 99 ~hv~~~~l~~~-~~~~~~~~l~~~------i-~~~~-~---~p~------d~~~PlW~~~lv~~~~~~~~~~lv~~~HH~ 160 (491)
.+.+.++... ..+ +-+++.+. + ...+ . -|. +.+.|+..+.+- -. .|+.+|-+.+||+
T Consensus 83 -~~~va~~~~d~~~p-~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~--~GG~~lg~~~~H~ 157 (451)
T 2rkv_A 83 -RVVVKDLRDDPSAP-TIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FI--KGGLILTVNGQHG 157 (451)
T ss_dssp -EEEEEECTTCTTSC-BHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EE--BTEEEEEEEEETT
T ss_pred -eEEEEeCCCCCCCC-CHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-Ee--cCceeeeeeehhc
Confidence 1222222110 011 23333321 0 0111 1 111 113677665554 22 2789999999999
Q ss_pred ccccccHHHHHHHHcc
Q 041931 161 LGDGTSLMSLLLACCR 176 (491)
Q Consensus 161 l~DG~s~~~l~~~l~~ 176 (491)
++||.|+..|+.....
T Consensus 158 v~Dg~g~~~Fl~awa~ 173 (451)
T 2rkv_A 158 AMDMVGQDAVIRLLSK 173 (451)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHH
Confidence 9999999999976554
No 13
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=91.97 E-value=5.3 Score=36.41 Aligned_cols=173 Identities=15% Similarity=0.091 Sum_probs=91.3
Q ss_pred EEEEeeechHHHHHHHHH-----cCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecC
Q 041931 251 RFVHRSVSLDDVKLVRNA-----MNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRP 325 (491)
Q Consensus 251 ~~~~~~~~l~~vk~ia~~-----~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~ 325 (491)
-..+..+++..+.+..++ .+.|++++++-|++.||.++=.-+. -+.....+.-..+.+.+++.|+.-
T Consensus 32 ~~~~~evDvt~l~~~r~~~k~~g~kls~~~~~ikA~~~Al~~~P~~N~-------~~~~~~~~i~~~~~v~igiAV~~~- 103 (224)
T 3rqc_A 32 FTVMEEVDVTSMVSILDSAKARNRKVTVTGFLARIVPSILKQYPYLNA-------IYDETRRVYILKKYYNIGIAVDTP- 103 (224)
T ss_dssp EEEEECCBTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHSGGGSB-------BCCSSTTCCCEECSCCEEEEEECS-
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHHhhe-------EEeCCCCEEEEeCccceEeEEEcC-
Confidence 344688888888777555 4679999999999999988632211 111110011111367788888741
Q ss_pred CCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCCCC
Q 041931 326 SAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASFPS 405 (491)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~~ 405 (491)
+ | .+ +++---. +..+..+..+.+++..++.++..-. +. .+.
T Consensus 104 --~----------------G-L~--vPvi~~a-~~~sl~~i~~~~~~l~~~ar~~~L~----------~~-------e~~ 144 (224)
T 3rqc_A 104 --D----------------G-LN--VFVIKDA-DRKSMVEISAEISDKASRARENKLQ----------LD-------EVQ 144 (224)
T ss_dssp --S----------------C-EE--EEEESCG-GGSCHHHHHHHHHHHHHHHTTTCCC----------GG-------GSC
T ss_pred --C----------------c-eE--EeEECCC-CCCCHHHHHHHHHHHHHHHHcCCCC----------cc-------ccC
Confidence 1 2 11 1221112 2457777777766665555542210 01 123
Q ss_pred cceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeC-----CEEEEEEEecCCCCCCHHHHHHHHHHHHHH
Q 041931 406 ETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYA-----NKMTFVLSVDDGLIPDPHKLCDDLEESLHL 480 (491)
Q Consensus 406 ~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~-----~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~ 480 (491)
..++++||+|.. ++ ....++. .+++..-+++..+. ..+.+++++|-.++ |-...+ .|.+.+.+
T Consensus 145 ggtftISnlG~~------G~---~~~tpii-n~pq~aIl~vG~~~~~p~r~~m~lsls~DHRvi-DGa~aa-~Fl~~l~~ 212 (224)
T 3rqc_A 145 DSTFTITNVGTI------GG---IMSTPII-NYPEVAILGVHRILEREGRKYMYLSLSCDHRLI-DGAVAT-RFIVDLKK 212 (224)
T ss_dssp CCSEEEEECTTT------CC---SEEECCC-CTTBSEEEEECCCEEETTEEECCEEEEEETTTS-CHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCcC------Cc---cceEecc-CCCCceEEEecccEEECCceEEEEEEEecccee-cHHHHH-HHHHHHHH
Confidence 458999999843 21 1233321 11221112222221 24889999999988 544444 33444544
Q ss_pred HH
Q 041931 481 IK 482 (491)
Q Consensus 481 l~ 482 (491)
+.
T Consensus 213 ~l 214 (224)
T 3rqc_A 213 VI 214 (224)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 14
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=91.01 E-value=3.2 Score=37.61 Aligned_cols=38 Identities=8% Similarity=0.142 Sum_probs=33.6
Q ss_pred EEEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Q 041931 251 RFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 251 ~~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~ 288 (491)
-..+.++++.++.+.+++.+.|+++.++=|++.||+++
T Consensus 28 ~~~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~ 65 (213)
T 3cla_A 28 FSLTSKIDITTLKKSLDDSAYKFYPVMIYLIAQAVNQF 65 (213)
T ss_dssp EEEEEEEECHHHHHHHHTSSCCHHHHHHHHHHHHHTTC
T ss_pred EEEEEEEEHHHHHHHHHHhCCCHHHHHHHHHHHHHhhC
Confidence 34578999999999999999999999999999999875
No 15
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=90.87 E-value=6.8 Score=35.91 Aligned_cols=169 Identities=12% Similarity=0.104 Sum_probs=87.7
Q ss_pred EEEeeechHHHHHHH---HH-------cCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEe
Q 041931 252 FVHRSVSLDDVKLVR---NA-------MNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFM 321 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia---~~-------~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPV 321 (491)
..+..+++..+.+.. +. .+.|++++++-|++.||.++=.-+ .-+... + .-..+.+.+++.|
T Consensus 31 ~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~N-------a~~~~~-~-i~~~~~v~igiAV 101 (233)
T 1scz_A 31 TTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVN-------ASIDGD-D-VVYHNYFDVSMAV 101 (233)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTT-------CEEETT-E-EECCSSCCEEECE
T ss_pred EEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhh-------EEEeCC-E-EEEeCceeEEEEE
Confidence 345777776665542 21 589999999999999998762211 001100 0 1011256677777
Q ss_pred eecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccC-CCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhh
Q 041931 322 NLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIA-LRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKA 400 (491)
Q Consensus 322 slR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~-~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~ 400 (491)
+... | +.+++=.+ +..+..+..+.+++..++.+...-. +.-
T Consensus 102 ~~~~-------------------G-----L~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~----------~~e---- 143 (233)
T 1scz_A 102 STPR-------------------G-----LVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLT----------VED---- 143 (233)
T ss_dssp EETT-------------------E-----EECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCC----------HHH----
T ss_pred EcCC-------------------c-----EEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCC----------ccc----
Confidence 5311 1 12222221 2457777777777766665553210 111
Q ss_pred cCCCCcceEEEeccCCCccceEEcCceeeEeeccccCCCc--eeEEEEEEe-----CC------EEEEEEEecCCCCCCH
Q 041931 401 ASFPSETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPN--GLMIHVVSY-----AN------KMTFVLSVDDGLIPDP 467 (491)
Q Consensus 401 ~~~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~--~l~v~v~sy-----~~------~l~~~v~~d~~~~~d~ 467 (491)
+...++++||+|.. ++ ....|+ ..+++ -++++-+.. +| .+.+++++|-.++ |-
T Consensus 144 ---~~ggtftISnlG~~------G~---~~~tpI-in~pq~aIl~vG~~~~~pv~~~g~i~~r~~m~lsls~DHRvi-DG 209 (233)
T 1scz_A 144 ---LTGGNFTITNGGVF------GS---LMSTPI-INPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLI-DG 209 (233)
T ss_dssp ---HSCCSEEEEEGGGG------TC---CCCCCC-CCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTC-CH
T ss_pred ---cCCCEEEEEeCCCC------Cc---cceEcc-cCCCCcEEEEccccEEEEEEECCEEEEEEEEEEEEEEcceee-ch
Confidence 12358999999853 22 112222 11122 234433332 34 3789999999988 54
Q ss_pred HHHHHHHHHHHHHHH
Q 041931 468 HKLCDDLEESLHLIK 482 (491)
Q Consensus 468 ~~l~~~~~~~l~~l~ 482 (491)
...+ .|.+.|.+++
T Consensus 210 a~aa-~Fl~~lk~~l 223 (233)
T 1scz_A 210 RESV-GFLVTIKELL 223 (233)
T ss_dssp HHHH-HHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHH
Confidence 4444 3344444443
No 16
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=88.99 E-value=10 Score=34.92 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=27.5
Q ss_pred EEEeeechHHHHHHH---HH------cCCcchhHHHHHHHHHHHHH
Q 041931 252 FVHRSVSLDDVKLVR---NA------MNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia---~~------~g~TvNdvllAa~a~aL~~~ 288 (491)
..+..+++..+.+.. ++ .+.|++++++-|++.||+++
T Consensus 42 ~~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikA~~~Al~~~ 87 (243)
T 1dpb_A 42 TQFESADITELEAFRVAQKAVAEKAGVKLTVLPLLLKACAYLLKEL 87 (243)
T ss_dssp EEEEEEECHHHHHHHHHTHHHHHHTTCCCCSHHHHHHHHHHHHHHS
T ss_pred EEEEEEEhHHHHHHHHHHhhhhhhccCCCChHHHHHHHHHHHHHhC
Confidence 345777776665542 22 58999999999999999876
No 17
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=88.42 E-value=15 Score=34.06 Aligned_cols=172 Identities=9% Similarity=0.003 Sum_probs=86.5
Q ss_pred EEEeeechHHHHHHHH----------HcCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEe
Q 041931 252 FVHRSVSLDDVKLVRN----------AMNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFM 321 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia~----------~~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPV 321 (491)
..+..+++..+.+..+ ..+.|++++++-|++.||+++=.-+. -+.... .... +.+.+++.|
T Consensus 45 t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na-------~~~~~~-i~~~-~~vnigiAV 115 (256)
T 3mae_A 45 WMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNS-------TWAGDK-IIEH-ANINISIAI 115 (256)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTTSE-------EEETTE-EEEC-SSCCEEECC
T ss_pred EEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHhhh-------EEecCE-EEEc-CcEEEEeEE
Confidence 3456777665554422 24699999999999999987622111 011000 0011 256677777
Q ss_pred eecCCCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhc
Q 041931 322 NLRPSAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAA 401 (491)
Q Consensus 322 slR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~ 401 (491)
+.-. | .+ ..-+...+..+..+..+.+++..++.++..-. +.
T Consensus 116 ~t~~-------------------G-L~---vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~----------~~------ 156 (256)
T 3mae_A 116 AAGD-------------------L-LY---VPVIKNADEKSIKGIAREISELAGKARNGKLS----------QA------ 156 (256)
T ss_dssp CCTT-------------------S-CC---CCEETTGGGSCHHHHHHHHHHHHHHHHTTCCC----------HH------
T ss_pred EcCC-------------------c-eE---EEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCC----------ch------
Confidence 5411 2 11 11111112456777777777666655543210 11
Q ss_pred CCCCcceEEEeccCCCccceEEcCceeeEeeccc-cCCCceeEEEEEEe-----CC------EEEEEEEecCCCCCCHHH
Q 041931 402 SFPSETTLWFSNVMGPQEEISLYGYPIAYVAPSC-CGQPNGLMIHVVSY-----AN------KMTFVLSVDDGLIPDPHK 469 (491)
Q Consensus 402 ~~~~~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~-~~~~~~l~v~v~sy-----~~------~l~~~v~~d~~~~~d~~~ 469 (491)
-+...++++||+|.. ++.. ..++. +....-++++-+.- +| .+.+++++|-.++ |-..
T Consensus 157 -e~~ggTftISNlG~~------G~~~---ftpIInppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRvi-DGa~ 225 (256)
T 3mae_A 157 -DMEGGTFTVNSTGSF------GSVQ---SMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRIL-DGLL 225 (256)
T ss_dssp -HHSCCSEEEECGGGG------TCSE---EECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTC-CHHH
T ss_pred -hcCCCEEEEecCCCC------Cccc---eEcccCCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccc-cHHH
Confidence 012348999999842 2221 22321 11111233333321 44 4789999999988 6444
Q ss_pred HHHHHHHHHHHHHH
Q 041931 470 LCDDLEESLHLIKT 483 (491)
Q Consensus 470 l~~~~~~~l~~l~~ 483 (491)
.+ .|.+.|.++++
T Consensus 226 aa-~Fl~~lk~~Le 238 (256)
T 3mae_A 226 AG-KFLQAIKANVE 238 (256)
T ss_dssp HH-HHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHh
Confidence 44 44455555544
No 18
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=88.26 E-value=12 Score=34.82 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=27.6
Q ss_pred EEEeeechHHHHHHHHH---------cCCcchhHHHHHHHHHHHHH
Q 041931 252 FVHRSVSLDDVKLVRNA---------MNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 252 ~~~~~~~l~~vk~ia~~---------~g~TvNdvllAa~a~aL~~~ 288 (491)
..+..+++..+.+..++ .+.|++++++-|++.||+++
T Consensus 57 ~~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikAva~Al~~~ 102 (262)
T 2ii3_A 57 GYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQF 102 (262)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHC
T ss_pred EEEEEEEhHHHHHHHHHHhhhhhhccCCccHHHHHHHHHHHHHHhC
Confidence 34677777666554222 57999999999999999876
No 19
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=86.84 E-value=17 Score=32.73 Aligned_cols=38 Identities=8% Similarity=-0.062 Sum_probs=34.0
Q ss_pred EEEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Q 041931 251 RFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 251 ~~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~ 288 (491)
-..+.++++..+.+.+++.+.|+|+.++=|++.||.++
T Consensus 30 ~~~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~ 67 (217)
T 2i9d_A 30 LSITSEVECGGARQRAKAAGQSFFLHYLYAVLRAANEI 67 (217)
T ss_dssp EEEEEEEECHHHHHHHHHTTCCHHHHHHHHHHHHHHHS
T ss_pred EEEEEEEEhHHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999999999876
No 20
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=86.78 E-value=11 Score=34.56 Aligned_cols=170 Identities=14% Similarity=0.057 Sum_probs=85.9
Q ss_pred EeeechHHHHHHHHH--------cCCcchhHHHHHHHHHHHHHHHHhcCcccccccccccCCCCCCCcceEEEEEeeecC
Q 041931 254 HRSVSLDDVKLVRNA--------MNTTINDVMLGVTQAGLSRYLNRKYGQLNIINGLSERNNNLPNNIRLRATFFMNLRP 325 (491)
Q Consensus 254 ~~~~~l~~vk~ia~~--------~g~TvNdvllAa~a~aL~~~~~~~g~~~~~~~~~~~~~~~~p~~~~l~~~vPVslR~ 325 (491)
+..+++..+.+..++ .+.|++++++-|++.||+++=.- +.-+.. ++ .-..+.+.+++.|+..
T Consensus 41 ~~evDvt~l~~~r~~~k~~~~~~~kls~~~~~ikAv~~Al~~~P~~-------Na~~~~-~~-i~~~~~v~igvAV~~~- 110 (239)
T 3b8k_A 41 SIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEA-------NSSWMD-TV-IRQNHVVDVSVAVSTP- 110 (239)
T ss_dssp EEEECCTTHHHHHHHTHHHHTTSSCCCHHHHHHHHHHHHHHHCCCS-------CTTSCC-CS-SSCSCCCCEEECEECS-
T ss_pred EEEEEcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHhChHh-------hEEEEC-CE-EEEeCceeEEEEEEcC-
Confidence 466666555554322 58999999999999999875211 111111 01 1111367788888641
Q ss_pred CCChhHHHHHhhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhHhhcCCCC
Q 041931 326 SAGIQELANMLKKGSKAKWGNQIGYIIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSKSFLKFCNKAASFPS 405 (491)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~~~~~rl~~v~~~~~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~~ 405 (491)
+ | .+ +++--.. +..+..+..+.+++..++.+...-. +. .+.
T Consensus 111 --~----------------G-L~--vPvi~~a-~~~~l~~i~~~~~~l~~~ar~~kL~----------~~-------e~~ 151 (239)
T 3b8k_A 111 --A----------------G-LI--TPIVFNA-HIKGVETIANDVVSLATKAREGKLQ----------PH-------EFQ 151 (239)
T ss_dssp --S----------------C-EE--CCEECCS-SCCCHHHHHHHHHHHHHHHHTTCCC----------GG-------GGC
T ss_pred --C----------------c-EE--EEEEcCC-CCCCHHHHHHHHHHHHHHHHcCCCC----------cc-------ccC
Confidence 1 1 11 1121222 2457777777777666665543210 11 123
Q ss_pred cceEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEe-------------CCEEEEEEEecCCCCCCHHHHHH
Q 041931 406 ETTLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSY-------------ANKMTFVLSVDDGLIPDPHKLCD 472 (491)
Q Consensus 406 ~~~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy-------------~~~l~~~v~~d~~~~~d~~~l~~ 472 (491)
..++++||+|..-.. .+ .++ .. ++... -++++-+.. ...+.+++++|-.++ |-...+
T Consensus 152 ggtftISnlG~~g~~-~f--tpi---in-~pq~a-Il~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRvi-DGa~aa- 221 (239)
T 3b8k_A 152 GGTFTISNLGMFGIK-NF--SAI---IN-PPQAC-ILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVV-DGAVGA- 221 (239)
T ss_dssp CCSEEEEECCSSCCS-SC--CCC---CC-TTSCC-CCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSS-CHHHHH-
T ss_pred CCEEEEEcCCCCCce-eE--ECc---CC-CCceE-EEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceee-chHHHH-
Confidence 458999999843211 00 111 10 11000 122222221 234899999999988 544444
Q ss_pred HHHHHHHHHH
Q 041931 473 DLEESLHLIK 482 (491)
Q Consensus 473 ~~~~~l~~l~ 482 (491)
.|.+.|.+++
T Consensus 222 ~Fl~~lk~~l 231 (239)
T 3b8k_A 222 QWLAEFRKYL 231 (239)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444455444
No 21
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=85.58 E-value=20 Score=32.31 Aligned_cols=38 Identities=0% Similarity=-0.098 Sum_probs=33.6
Q ss_pred EEEEeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Q 041931 251 RFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 251 ~~~~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~ 288 (491)
-..+.++++.++.+.+++.+.|+++.++=|++.||+++
T Consensus 33 ~t~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~ 70 (219)
T 1q23_A 33 YNQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAH 70 (219)
T ss_dssp EEEEEEEECHHHHHHHHHTTCCHHHHHHHHHHHHHTTC
T ss_pred EEEEEEEEhHHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 34478999999999989999999999999999999875
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=83.80 E-value=21 Score=32.92 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=29.6
Q ss_pred EEEEeeechHHHHHHHHH-----cCCcchhHHHHHHHHHHHHH
Q 041931 251 RFVHRSVSLDDVKLVRNA-----MNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 251 ~~~~~~~~l~~vk~ia~~-----~g~TvNdvllAa~a~aL~~~ 288 (491)
.+.+..+++..+.+.+++ .++|++++++-|++.||.++
T Consensus 40 ~~~~~evDvt~l~~~r~~~k~~~~kls~~~~iikAva~AL~~~ 82 (250)
T 3l60_A 40 AKASVEVICAELLRLRDRFVSAAPEITPFALTLRLLVIALKHN 82 (250)
T ss_dssp EEEEEEEECHHHHHHHHHHTTTCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhC
Confidence 344678888777776553 36799999999999999876
No 23
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=52.78 E-value=16 Score=24.80 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=23.0
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGLS 286 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL~ 286 (491)
-+.++..|+..|.|+|..+..++..++.
T Consensus 19 ~~~l~~~A~~~grS~N~~i~~~L~~~l~ 46 (53)
T 1baz_A 19 LDLVRKVAEENGRSVNSEIYQRVMESFK 46 (53)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 4788889999999999998877665543
No 24
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=52.52 E-value=2.1e+02 Score=32.44 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=26.9
Q ss_pred EEEEeeechHHHHH---HHHH-------cCCcchhHHHHHHHHHHHHH
Q 041931 251 RFVHRSVSLDDVKL---VRNA-------MNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 251 ~~~~~~~~l~~vk~---ia~~-------~g~TvNdvllAa~a~aL~~~ 288 (491)
...+..+++..+.+ ..+. .++|++++++-|++.||+++
T Consensus 11 ~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~ 58 (1113)
T 2xt6_A 11 ATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKF 58 (1113)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhC
Confidence 33457777655543 2222 47999999999999999876
No 25
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=52.43 E-value=16 Score=26.52 Aligned_cols=29 Identities=10% Similarity=0.192 Sum_probs=24.6
Q ss_pred chHHHHHHHHHcCCcchhHHHHHHHHHHH
Q 041931 258 SLDDVKLVRNAMNTTINDVMLGVTQAGLS 286 (491)
Q Consensus 258 ~l~~vk~ia~~~g~TvNdvllAa~a~aL~ 286 (491)
-.++++..|++.|.++|..+..++..++.
T Consensus 30 L~~~L~~~A~~~grSlNaeIv~~Le~sl~ 58 (69)
T 3qoq_A 30 MREQIAEVARSHHRSMNSEIIARLEQSLL 58 (69)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999888776665
No 26
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=46.97 E-value=22 Score=25.31 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=24.8
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGLSRY 288 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL~~~ 288 (491)
-+.++..|++.|.|+|.-+..++..++...
T Consensus 19 h~~l~~~A~~~GrSlN~~Iv~~L~~~l~~~ 48 (64)
T 1nla_A 19 LDLVRKVAEENGRSVNSEIYQRVMESFKKE 48 (64)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcc
Confidence 478888999999999999988888776543
No 27
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=42.09 E-value=25 Score=25.96 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=23.0
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNR 291 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~ 291 (491)
-.++|.+|...|.|++|++--+ ++.|+.+
T Consensus 46 h~rlK~~Aa~~g~Smsdvvrel----i~~~L~~ 74 (76)
T 1p94_A 46 HTRFKAACARKGTSITDVVNQL----VDNWLKE 74 (76)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHH----HHHHHHh
Confidence 4789999999999999998554 4566654
No 28
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=41.11 E-value=34 Score=22.84 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=25.4
Q ss_pred eeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhc
Q 041931 255 RSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKY 293 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~g 293 (491)
..-..+.+..+|+..|.|.++++-- |+..|+..++
T Consensus 17 ~~el~~~l~~~a~~~g~s~s~~ir~----ai~~~l~~~~ 51 (55)
T 2k9i_A 17 PQEWHDRLMEIAKEKNLTLSDVCRL----AIKEYLDNHD 51 (55)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHHH----HHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHhH
Confidence 3444678888999999999998744 5566665543
No 29
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=38.76 E-value=14 Score=33.52 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=25.8
Q ss_pred EEEEecccccccccHHHHHHHHcccCCCCC
Q 041931 153 AVLRVHHSLGDGTSLMSLLLACCRKVSDPN 182 (491)
Q Consensus 153 lv~~~HH~l~DG~s~~~l~~~l~~~~~~p~ 182 (491)
+.+.+||-+.||.-+.+|+..+-+...+|.
T Consensus 189 lsls~DHRviDGa~aa~Fl~~l~~~le~p~ 218 (224)
T 3rqc_A 189 LSLSCDHRLIDGAVATRFIVDLKKVIEDPN 218 (224)
T ss_dssp EEEEEETTTSCHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEeccceecHHHHHHHHHHHHHHHhCHH
Confidence 889999999999999999998877655554
No 30
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=35.79 E-value=17 Score=32.76 Aligned_cols=113 Identities=9% Similarity=0.022 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHhhccCCccceecccccCCceEEEe--e--ec-CCCcceeeec-CCCCCCCCcH----HHHHHHHHHhhc
Q 041931 58 EVVKANLEHSLLKHRRFSSLQVVDEKIEGGLKWVP--T--KV-NLDDHVIVPN-LEPKLIDSPD----KFVEDYTSSLSQ 127 (491)
Q Consensus 58 ~~l~~~l~~~~~~~p~lr~~v~~~~~~~~~p~w~~--~--~~-d~~~hv~~~~-l~~~~~~~~~----~~l~~~i~~~~~ 127 (491)
+-+..++...+.+||.|++++... .--+|.. . .+ +.+....+.- .+.. . +- +++.+++++.-.
T Consensus 52 ~~~ikAv~~Al~~~P~~Na~~~~~----~i~~~~~v~igiAVf~t~~GL~vpvi~~~~--~-~~~~i~~~~~~l~~~ar~ 124 (213)
T 3cla_A 52 PVMIYLIAQAVNQFDELRMAIKDD----ELIVWDSVDPQFTVFHQETETFSALSCPYS--S-DIDQFMVNYLSVMERYKS 124 (213)
T ss_dssp HHHHHHHHHHHTTCGGGSEEEETT----EEEEESCCEEEEEEEETTTTEEEEEECCCC--S-SHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhCHHhhEEEECC----EEEEEeccceeEEEEeCCCceEEEEEecCC--C-CHHHHHHHHHHHHHHHhh
Confidence 456688888899999999998632 1123332 2 22 3344333211 1111 1 33 344455554444
Q ss_pred C-CC----CCCCCceEEEEec---------ccC-C----------------CCe--eEEEEEecccccccccHHHHHHHH
Q 041931 128 T-GI----KMSMPMWDLHLLN---------IKT-S----------------DAE--SVAVLRVHHSLGDGTSLMSLLLAC 174 (491)
Q Consensus 128 ~-p~----d~~~PlW~~~lv~---------~~~-~----------------~~~--~~lv~~~HH~l~DG~s~~~l~~~l 174 (491)
. .+ +..+--+-+.-+. +.. . +++ --|.+.+||.++||.-+.+++..+
T Consensus 125 ~~kL~~~~~~~ggtftISnlg~~~ft~i~~~~~~g~~~~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~l 204 (213)
T 3cla_A 125 DTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRL 204 (213)
T ss_dssp CCSSSTTSSCCSSEEEEEEETTCCCSCCCCCCSCCTTCCSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCEEEEEcCCCCCcccccccCCCCCcccccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHH
Confidence 2 34 1233445554330 110 0 122 258899999999999999998877
Q ss_pred ccc
Q 041931 175 CRK 177 (491)
Q Consensus 175 ~~~ 177 (491)
-+.
T Consensus 205 k~~ 207 (213)
T 3cla_A 205 QEL 207 (213)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 31
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=34.38 E-value=18 Score=32.65 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=22.0
Q ss_pred EEEEEecccccccccHHHHHHHHcc
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCR 176 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~ 176 (491)
-|.+.+||.++||.-+.+++..+-+
T Consensus 190 ~lsls~DHRvvDG~~aa~Fl~~lk~ 214 (217)
T 2i9d_A 190 PIAMTIHHGFIDGHHLSLFYKKVED 214 (217)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEecchhhChHHHHHHHHHHHH
Confidence 5889999999999999999887653
No 32
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=33.60 E-value=23 Score=26.32 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=20.1
Q ss_pred hHHHHHHHHHcCCcchhHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVT 281 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~ 281 (491)
-+.+|.+|+..|.|||+++.-.+
T Consensus 13 H~rLKalAa~qG~SInqli~E~l 35 (83)
T 2an7_A 13 HQSLKALAALQGKTIKQYALERL 35 (83)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHHHHHHHHcCCcHHHHHHHHc
Confidence 47899999999999999987664
No 33
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=33.35 E-value=19 Score=32.51 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=22.7
Q ss_pred EEEEEecccccccccHHHHHHHHccc
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRK 177 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~ 177 (491)
-|.+.+||.+.||.-+.+++..+-..
T Consensus 186 ~lsls~DHRvvDG~~aa~Fl~~lk~~ 211 (219)
T 1q23_A 186 PLAIQVHHAVCDGFHVGRMLNELQQY 211 (219)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEchhhChHHHHHHHHHHHHH
Confidence 58899999999999999998876654
No 34
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=32.44 E-value=15 Score=33.48 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=24.7
Q ss_pred EEEEEecccccccccHHHHHHHHcccCCCC
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRKVSDP 181 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p 181 (491)
-+.+.+||-+.||.-+.+|+..+-+...+|
T Consensus 197 ~lsls~DHRviDGa~aa~Fl~~lk~~le~p 226 (233)
T 1scz_A 197 YLALSYDHRLIDGRESVGFLVTIKELLEDP 226 (233)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEcceeechHHHHHHHHHHHHHHhCH
Confidence 488999999999999999998877644344
No 35
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=31.17 E-value=14 Score=33.88 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=25.1
Q ss_pred eEEEEEecccccccccHHHHHHHHcccCCCC
Q 041931 151 SVAVLRVHHSLGDGTSLMSLLLACCRKVSDP 181 (491)
Q Consensus 151 ~~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p 181 (491)
--+.+.+||-++||.-+.+|+..+-+...+|
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~p 234 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEKP 234 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhCH
Confidence 3599999999999999999988876544343
No 36
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=29.66 E-value=2.3e+02 Score=29.91 Aligned_cols=68 Identities=15% Similarity=0.035 Sum_probs=45.6
Q ss_pred eEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHhhh
Q 041931 408 TLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGLIPDPHKLCDDLEESLHLIKTASLL 487 (491)
Q Consensus 408 ~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~~~d~~~l~~~~~~~l~~l~~~a~~ 487 (491)
-+..|++|++. + ..+.+.+..+.|++|+=.--++.+.|.|++-. -.+.++|.+.++++|.++.+....
T Consensus 581 ~LSTS~~~~~~--~--------~~~gfgPv~~dGyGi~Y~i~~~~i~f~iSs~~--~t~~~~F~~~L~~al~dm~~ll~~ 648 (653)
T 2deb_A 581 ILSTSTLNSPA--V--------SLGGFAPVVPDGFGIAYAVHDDWIGCNVSSYS--GRNAREFLHCVQKCLEDIFDALEG 648 (653)
T ss_dssp SEEEEECCCTT--E--------EEEECCCSSTTCEEEEEEECSSCEEEEEEECT--TSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCCCCc--c--------ccceeeccCCCceEEEEEecCCeEEEEEEeCC--CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 46778887643 1 12223222334566655555799999999853 248999999999999999876543
No 37
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=28.96 E-value=17 Score=33.52 Aligned_cols=30 Identities=10% Similarity=0.007 Sum_probs=24.8
Q ss_pred EEEEEecccccccccHHHHHHHHcccCCCC
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRKVSDP 181 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p 181 (491)
-+.+.+||-++||.-+.+|+..+-+...+|
T Consensus 209 ~lsls~DHRviDGa~aa~Fl~~lk~~le~p 238 (243)
T 1dpb_A 209 PLSLSYDCRVINGAAAARFTKRLGDLLADI 238 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHHHHHCG
T ss_pred EEEEEECcccccHHHHHHHHHHHHHHHhCH
Confidence 589999999999999999988877544343
No 38
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=26.85 E-value=77 Score=21.71 Aligned_cols=29 Identities=14% Similarity=0.265 Sum_probs=22.0
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNR 291 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~ 291 (491)
-.+++..|...|.|+|+++-- ||..|+..
T Consensus 25 H~rlk~~Aa~~g~Sln~~i~e----AL~~yl~~ 53 (56)
T 2kel_A 25 KTRLKVYCAKNNLQLTQAIEE----AIKEYLQK 53 (56)
T ss_dssp HHHHHHHHHHSCCCHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHH----HHHHHHHH
Confidence 478888899999999999755 45555544
No 39
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=26.78 E-value=21 Score=33.27 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=24.1
Q ss_pred EEEEEecccccccccHHHHHHHHcccCCC
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRKVSD 180 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~~~~ 180 (491)
.+.+.+||-++||.-+.+|+..+-+...+
T Consensus 225 ~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 225 NVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred EEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 48899999999999999998887654433
No 40
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=26.09 E-value=67 Score=23.69 Aligned_cols=28 Identities=7% Similarity=0.005 Sum_probs=24.3
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGLS 286 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL~ 286 (491)
...+|..|+++|-++|+.+..++..++.
T Consensus 13 ~~~Lk~rAa~~GrSle~e~r~iL~~a~~ 40 (77)
T 2bsq_E 13 HNAIKFRARAAGRSTEAEIRLILDNIAK 40 (77)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 4678889999999999999998888764
No 41
>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*
Probab=26.06 E-value=2.3e+02 Score=29.70 Aligned_cols=69 Identities=19% Similarity=0.129 Sum_probs=45.7
Q ss_pred eEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHhh
Q 041931 408 TLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGL-IPDPHKLCDDLEESLHLIKTASL 486 (491)
Q Consensus 408 ~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~-~~d~~~l~~~~~~~l~~l~~~a~ 486 (491)
-+..|++|++... .+.+.+..+.|++|+=.--++.+.|+|++-... -.+.++|.+.++++|.++.+...
T Consensus 529 ~LSTSq~~~~~~~----------~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 598 (616)
T 1nm8_A 529 HLSTSQVPAKTDC----------VMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQ 598 (616)
T ss_dssp SEEEEECCCSSSC----------EEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCccC----------ceEEecCCCCeeEEEEEecCCeEEEEEEeCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 4677888764311 222322233456665555688999999985432 24799999999999999987554
No 42
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=25.75 E-value=1.1e+02 Score=20.07 Aligned_cols=34 Identities=12% Similarity=0.202 Sum_probs=25.2
Q ss_pred eeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHh
Q 041931 255 RSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRK 292 (491)
Q Consensus 255 ~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~~~ 292 (491)
..--.+++..+|+..|.|.+.++- .|+..|+...
T Consensus 11 ~~~l~~~l~~lA~~~~rs~s~lir----~Ai~~yl~~~ 44 (52)
T 2gpe_A 11 DDATRERIKSAATRIDRTPHWLIK----QAIFSYLEQL 44 (52)
T ss_dssp EHHHHHHHHHHHHHTTCCHHHHHH----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCcCHHHHHH----HHHHHHHHHH
Confidence 333468899999999999999964 4566666554
No 43
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=25.06 E-value=65 Score=25.97 Aligned_cols=27 Identities=19% Similarity=0.228 Sum_probs=23.0
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGL 285 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL 285 (491)
-++++.+|++.|.|+|..+..++..++
T Consensus 30 h~~La~~Ak~eGrSLN~eIv~~Le~sl 56 (120)
T 1u9p_A 30 LDLVRKVAEENGRSVNSEIYQRVMESF 56 (120)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 478888999999999999988777654
No 44
>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*
Probab=23.07 E-value=2.7e+02 Score=29.26 Aligned_cols=69 Identities=17% Similarity=0.066 Sum_probs=45.7
Q ss_pred eEEEeccCCCccceEEcCceeeEeeccccCCCceeEEEEEEeCCEEEEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHhh
Q 041931 408 TLWFSNVMGPQEEISLYGYPIAYVAPSCCGQPNGLMIHVVSYANKMTFVLSVDDGL-IPDPHKLCDDLEESLHLIKTASL 486 (491)
Q Consensus 408 ~~~~SNvpgp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~~~l~~~v~~d~~~-~~d~~~l~~~~~~~l~~l~~~a~ 486 (491)
-+..|++|++.. . .+.+.+..+.|++|+=.--++.+.|+|++-... -.+.++|.+.++++|.++.+...
T Consensus 545 ~LSTSq~~~~~~--~--------~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 614 (639)
T 1t1u_A 545 VLSTSQVPTTME--M--------FCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 614 (639)
T ss_dssp SEEEEECCCSSS--E--------EEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCcc--c--------cceEcccCCCceEEEEEEcCCeEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 467788876421 1 122322233456665555688999999986432 24799999999999999987543
No 45
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=22.94 E-value=32 Score=31.89 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=26.7
Q ss_pred EEEEEecccccccccHHHHHHHHcccCCCCCC
Q 041931 152 VAVLRVHHSLGDGTSLMSLLLACCRKVSDPNE 183 (491)
Q Consensus 152 ~lv~~~HH~l~DG~s~~~l~~~l~~~~~~p~~ 183 (491)
.+.+.+||-+.||.-+.+|+..+-+...+|..
T Consensus 211 ~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~ 242 (256)
T 3mae_A 211 NLCLSIDHRILDGLLAGKFLQAIKANVEKISK 242 (256)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHHTCCT
T ss_pred EEEEEEccccccHHHHHHHHHHHHHHHhChHH
Confidence 48899999999999999999887776556654
No 46
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=22.68 E-value=1.1e+02 Score=19.12 Aligned_cols=33 Identities=12% Similarity=0.246 Sum_probs=24.0
Q ss_pred EeeechHHHHHHHHHcCCcchhHHHHHHHHHHHHHHH
Q 041931 254 HRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLN 290 (491)
Q Consensus 254 ~~~~~l~~vk~ia~~~g~TvNdvllAa~a~aL~~~~~ 290 (491)
...--.+++.++|++.|.|-++++- .|+..|+.
T Consensus 9 l~~~l~~~Ld~~a~~~g~srS~~ir----~ai~~~l~ 41 (45)
T 2cpg_A 9 LSESVLENLEKMAREMGLSKSAMIS----VALENYKK 41 (45)
T ss_dssp EEHHHHHHHHHHHHHHTCCHHHHHH----HHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcCHHHHHH----HHHHHHHH
Confidence 3444468888999999999988864 45566654
No 47
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=22.02 E-value=1e+02 Score=22.97 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=31.4
Q ss_pred eechHHHHHHHHHcCCc-chhHHHHHHHHHHHHHHHHh
Q 041931 256 SVSLDDVKLVRNAMNTT-INDVMLGVTQAGLSRYLNRK 292 (491)
Q Consensus 256 ~~~l~~vk~ia~~~g~T-vNdvllAa~a~aL~~~~~~~ 292 (491)
.++.+.++++++..|++ +++-..-.+...+..|+...
T Consensus 10 ~ip~~~I~Riar~~Gv~rIs~da~~~l~~~l~~~~~~I 47 (84)
T 2hue_C 10 GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENV 47 (84)
T ss_dssp SSCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCchhccHHHHHHHHHHHHHHHHHH
Confidence 46788999999999996 99888888999998887753
No 48
>1mnt_A MNT repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=20.10 E-value=82 Score=23.07 Aligned_cols=27 Identities=22% Similarity=0.358 Sum_probs=22.2
Q ss_pred hHHHHHHHHHcCCcchhHHHHHHHHHH
Q 041931 259 LDDVKLVRNAMNTTINDVMLGVTQAGL 285 (491)
Q Consensus 259 l~~vk~ia~~~g~TvNdvllAa~a~aL 285 (491)
-+.++..|+.+|.|+|..+..++..++
T Consensus 16 h~~L~~~A~~~grSlN~~I~~~L~~al 42 (76)
T 1mnt_A 16 REKLKFRAEANGRSMNSELLQIVQDAL 42 (76)
T ss_dssp HHHHHHTHHHHTSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 467888899999999999887776655
Done!