BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041936
(402 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449454724|ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/385 (64%), Positives = 312/385 (81%), Gaps = 2/385 (0%)
Query: 18 HHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLA 77
H+R L+T ILS PL++K K+RAAL+LLK+E NPE+I++ICRAA+LTPE HLDR+A
Sbjct: 23 HYRSLST--ILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIA 80
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
FS+AI+KLS+ +F+GI ++LEELK+RPDL+NERF H+I+LYGQANM +HA+RTFK++D
Sbjct: 81 FSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQID 140
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E +RHSV NALL A +AKDYKE+KRV++EFPK YGI+PD+DTYNRVIKAF ES S
Sbjct: 141 ELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSS 200
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
SS SI+AEMDRK +KPNA++F +AG Y EEK+EDV KVL +ME+YG++ GV+ YN R
Sbjct: 201 SSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNAR 260
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I SLCKL++ EAKAL D MLS+GM PNSVTY I+GFCK+GN +EAK ++ M NSG
Sbjct: 261 IRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGC 320
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+S YFT+ YF+C+GGDYETA C ES+ KGWVPNF+TMKSLV GL SKV EAK+
Sbjct: 321 QPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQ 380
Query: 378 LIGLVKEKFTKNVDTWNEIEAGLPQ 402
LIG +KE+F+KNV+ W+EIEAGLPQ
Sbjct: 381 LIGQIKERFSKNVEKWSEIEAGLPQ 405
>gi|359494840|ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Vitis vinifera]
Length = 396
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/401 (61%), Positives = 314/401 (78%), Gaps = 6/401 (1%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
F+SRLR HR SSILS TPL+SK+K+RAAL+LLKSE +P++ILEI
Sbjct: 2 AFLSRLRP------ISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEI 55
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
CRAAALTPESHLDR+AFS+AI+KL+++ +F+ I +L+ELK RPDL+ ERF +H+I+L+G
Sbjct: 56 CRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFG 115
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA M AVRTF++M + + +V + NALL + +AK+YKE R+F+EFPKTYGI+ +L
Sbjct: 116 QAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 175
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D+YN V+KAF ES SSS YSILAEM RK +KPNA+SFG L+AGFY EEKYEDV KVL+M
Sbjct: 176 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKM 235
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME Y M+ G+S YN+RI SLCKL+K +EAKALLD +L++ MKPNS TY H I+GFCK+GN
Sbjct: 236 MEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGN 295
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EAKK ++ M N G P+S YFT+VYF+C+GGD+E+AL FCKE + KGW PN +TM S
Sbjct: 296 LDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTS 355
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
LV GL SKV EA+ELIG +KEKF++NVD WNEIEAGLPQ
Sbjct: 356 LVNGLVSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ 396
>gi|147767812|emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
Length = 396
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/401 (61%), Positives = 314/401 (78%), Gaps = 6/401 (1%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
F+SRLR HR SSILS TPL+SK+K+RAAL+LLKSE +P++ILEI
Sbjct: 2 AFLSRLRP------ISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEI 55
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
CRAAALTPESHLDR+AFS+AI+KL+++ +F+ I +L+ELK RPDL+ ERF +H+I+L+G
Sbjct: 56 CRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFG 115
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA M AVRTF++M + + +V + NALL + +AK+YKE R+F+EFPKTYGI+ +L
Sbjct: 116 QAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 175
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D+YN V+KAF ES SSS YSILAEM RK +KPNA+SFG L+AGFY EEKYEDV KVL+M
Sbjct: 176 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKM 235
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME Y M+ G+S YN+RI SLCKL+K +EAKALLD +L++ MKPNS TY H I+GFCK+GN
Sbjct: 236 MEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGN 295
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EAKK ++ M N G P+S YFT+VYF+C+GGD+E+AL FCKE + KGW PN +TM S
Sbjct: 296 LDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTS 355
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
LV GL SKV EA+ELIG +KEKF++NVD WNEIEAGLPQ
Sbjct: 356 LVNGLVSISKVEEAQELIGQIKEKFSRNVDKWNEIEAGLPQ 396
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/407 (58%), Positives = 320/407 (78%), Gaps = 6/407 (1%)
Query: 2 GFISRLRTNLNLF----SQKHHRYLAT-SSILSSGDKTPLTSKDKTRAALTLLKSESNPE 56
+SR+R++ +LF + R L++ S+ILS KTPLTSK+K++AAL+LLKSE +P+
Sbjct: 2 ALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPD 61
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAH 115
+ILEICRAA+LTP+ +DR+AFS A+ L+E +F+ +S L+ ++ RPDL++ERF AH
Sbjct: 62 RILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAH 121
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+I+LY QANM +H++R F+++++ ++ +V + NALL A +AKDYKE KRV+IE PK Y
Sbjct: 122 AIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY 181
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL+TYNR+IK FCES +SS+YSI+AEM+RK IKPN+SSFG +++GFY E+K ++V
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KVL MM+ G+ GVS YN+RI SLCK +K EAKALLD MLS GMKPN+VTYSH I+G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC + +FEEAKK ++IM N G P+S YFT++Y++CKGGD+ETAL CKES+ K WVP+
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
F+ MKSLV GLA SKV EAKELIG VKEKFT+NV+ WNE+EA LPQ
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/407 (58%), Positives = 319/407 (78%), Gaps = 6/407 (1%)
Query: 2 GFISRLRTNLNLF----SQKHHRYLAT-SSILSSGDKTPLTSKDKTRAALTLLKSESNPE 56
+SR+R++ +LF + R L++ S+ILS KTPLTSK+K++AAL+LLKSE +P+
Sbjct: 2 ALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPD 61
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAH 115
+ILEICRAA+LTP+ H+DR+AFS A+ L+E +F+ +S L+ ++ R DL++ERF AH
Sbjct: 62 RILEICRAASLTPDCHIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRQDLKSERFAAH 121
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+I+LY QANM +H++R F+++++ ++ +V + NALL A +AKDYKE KRV+IE PK Y
Sbjct: 122 AIVLYAQANMLDHSLRVFRDLEKFEIPRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY 181
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL+TYNR+IK FCES +SS+YSI+AEM+RK IKPN+SSFG +++GFY E+K ++V
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYSEDKNDEV 241
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KVL MM+ G+ GVS YN+RI SLCK +K EAKALLD MLS GMKPN+VTYSH I G
Sbjct: 242 GKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRG 301
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC + +FEEAKK +++M N G P+S YFT++Y++CKGGD+ETAL CKES+ K WVP+
Sbjct: 302 FCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPS 361
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
F+ MKSLV GLA SKV EAKELIG VKEKFT+NV+ WNE+EA LPQ
Sbjct: 362 FSIMKSLVNGLAKDSKVDEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
>gi|255554937|ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542351|gb|EEF43893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 397
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/376 (63%), Positives = 305/376 (81%), Gaps = 7/376 (1%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
TPL+SK++TRAA++LLKSE NP+KI+EIC +A+LTPE+HLDR+AFS+AI KLS++N F+
Sbjct: 22 TPLSSKERTRAAISLLKSEENPQKIIEICNSASLTPEAHLDRIAFSVAITKLSKSNNFSF 81
Query: 94 ISQYLEELK-TRPDLQ-NERFHAHSIILYGQANMTEHAVRTFKEMDEHKL----RHSVGA 147
I Q+L++L+ +RPDL+ +ERF AH+I+L+GQA M +HAVRTFKE + SV
Sbjct: 82 IQQFLDDLRVSRPDLRTSERFAAHAIVLFGQAAMVDHAVRTFKEYHTDVIGLGNNGSVKV 141
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FNALL A +AKDY EVKRVF+EFPK Y I+P+LD+YN VIK+FC+S SSS +S+LAEM
Sbjct: 142 FNALLFACYLAKDYSEVKRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSSSGFSVLAEM 201
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM-ERYGMKSGVSMYNVRIHSLCKLRK 266
DRK +KPNA++FG L+AGFYKEEKYEDV KVL+MM ++YG++ GVS YN+RI SLCKL+K
Sbjct: 202 DRKRLKPNATTFGHLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKK 261
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
AEAKALLD MLS+ MKPNSVTY+H I+GFC +G+ E K+ ++ M N G P+S+ YFT
Sbjct: 262 SAEAKALLDGMLSRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFT 321
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+++++CKG D+ETAL CKESI K WVPN TMKSLV GLAG KV EAKELI +KEKF
Sbjct: 322 LLHYLCKGQDFETALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDEAKELIAKIKEKF 381
Query: 387 TKNVDTWNEIEAGLPQ 402
TKNV TW EIEAGLP+
Sbjct: 382 TKNVSTWEEIEAGLPR 397
>gi|21553755|gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/406 (57%), Positives = 317/406 (78%), Gaps = 5/406 (1%)
Query: 2 GFISRLRTNLNLF----SQKHHRYLAT-SSILSSGDKTPLTSKDKTRAALTLLKSESNPE 56
+SR+R++ +LF + R L++ S+IL+ KTPLTSK+K++AAL+LLKSE +P+
Sbjct: 2 ALLSRIRSSTSLFRYLNASPQIRSLSSASTILAPDSKTPLTSKEKSKAALSLLKSEKDPD 61
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+ILEICRAA+LTP+ H+DR+AFS A+ L+E N+F+ +S L+ L++ERF AH+
Sbjct: 62 RILEICRAASLTPDCHIDRIAFSAAVENLAEKNHFSAVSNLLDGFIENRHLKSERFAAHA 121
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+LY QANM +H++R F+++++ ++ +V + NALL A +AKDYKE KRV+IE PK YG
Sbjct: 122 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 181
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+PDL+TYNR+IK FCES +SS+YSI+AEM+RK IKPN+SSFG +++GFY E+K ++V
Sbjct: 182 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 241
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
KVL MM+ G+ GVS YN+RI SLCK +K EAKALLD MLS GMKPN+VTYSH I+GF
Sbjct: 242 KVLAMMKARGVNIGVSTYNIRIQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 301
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C + +FEEAKK +++M N G P+S YFT++Y++CKGGD+ETAL CKES+ K WVP+F
Sbjct: 302 CNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 361
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
+ MKSLV GLA SKV EAKELIG VKEKFT+NV+ WNE+EA LPQ
Sbjct: 362 SIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 407
>gi|356555650|ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Glycine max]
Length = 388
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/392 (58%), Positives = 307/392 (78%), Gaps = 4/392 (1%)
Query: 11 LNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPE 70
+++FS+ H +T+SILS TPLTSK KTR+A+ LLKSE+NPE+IL+ICRAAALTP+
Sbjct: 1 MSIFSRLRH--YSTTSILSPNSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAALTPD 58
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
SH+DR AFS+A++KL+ A++F GI +L++LKTRPDL+NE+F +H+I+LYGQANM +HA+
Sbjct: 59 SHIDRRAFSLAVSKLAAAHHFAGIRTFLDDLKTRPDLRNEKFLSHAIVLYGQANMLDHAI 118
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
RTF E D R SV N+LL A +AK+YKE+ R+++EFPKTY I+P+LDTYN VIKA
Sbjct: 119 RTFTE-DLPSPR-SVKTLNSLLFAALLAKNYKELTRIYLEFPKTYSIQPNLDTYNTVIKA 176
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
F ES +SS YS+LAEMD+ +I PN ++ ++GFY+E+K++DV KVL++ME+Y +
Sbjct: 177 FAESGSTSSVYSVLAEMDKNNIAPNVTTLNNSLSGFYREKKFDDVGKVLKLMEKYSVFPS 236
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+S YNVRI SLCKL++ +EAKALL+ M+ G KPNSV+Y+ I+GFCK+G+ EEAK+ +R
Sbjct: 237 ISTYNVRIQSLCKLKRSSEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFR 296
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G P+ YFT+V+F+C GG++E AL KE + KGWVPNFTTMKSLV GLAGA
Sbjct: 297 DMKRRGYLPDGECYFTLVHFLCCGGEFEAALEVAKECMGKGWVPNFTTMKSLVNGLAGAL 356
Query: 371 KVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
KV EAKE+I +KEKF ++ D W+EIEAGLPQ
Sbjct: 357 KVDEAKEVIKQIKEKFAESGDKWDEIEAGLPQ 388
>gi|297849542|ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338494|gb|EFH68911.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 403
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/403 (52%), Positives = 297/403 (73%), Gaps = 3/403 (0%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDK-TRAALTLLKSESNPEKILE 60
F+ R+RT+ +L Q ++ SS S LTSK K +RA L+LLKSE+NP +ILE
Sbjct: 2 AFLFRIRTSESLV-QNVTQFRLQSSSSSIFTLNSLTSKQKKSRATLSLLKSENNPNRILE 60
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAHSIIL 119
ICR+A+LTP+ H+DR+ FS+A+ L++ +F +SQ L+ ++ +PD ++E F +IIL
Sbjct: 61 ICRSASLTPDYHVDRIIFSVAVVTLAKEKHFVAVSQLLDGFIQNQPDPKSESFAVRAIIL 120
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+ANM + +++TF++++++++ +V + NALL A +AKDYKE RV++E PK YGI+P
Sbjct: 121 YGRANMLDRSIQTFRDLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL+TYNR+I+ CES +S +YSI+AEM+RK +KP ASSFG ++ GFYKEEK++DV KV+
Sbjct: 181 DLETYNRMIRVLCESGSTSLSYSIVAEMERKWVKPTASSFGLMIDGFYKEEKFDDVRKVM 240
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MM+ +G+ GV+ YN+ I LCK +K AEAKAL+D ++S M+PNSVTYS I+GFC +
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N +EA + +M SG P+S YFT++ +CKGGD+ETAL C+ES+ K WVP+F+ M
Sbjct: 301 ENLDEAMNLFEVMVYSGYKPDSECYFTLIRCLCKGGDFETALILCRESMEKNWVPSFSIM 360
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
K LV GLA SKV EAKELI VKEKFT+NVD WNE+EA LPQ
Sbjct: 361 KWLVNGLASVSKVDEAKELIAQVKEKFTRNVDLWNEVEAALPQ 403
>gi|224113615|ref|XP_002316521.1| predicted protein [Populus trichocarpa]
gi|222859586|gb|EEE97133.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/409 (54%), Positives = 291/409 (71%), Gaps = 17/409 (4%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
+RLR L +HH +TS PL+SK KT AAL+LLKSE+NPEKILEI
Sbjct: 2 ALFARLRLRLQFLHLRHHINFSTS---------PLSSKSKTCAALSLLKSETNPEKILEI 52
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT-RPDLQNERFHAHSIILY 120
CR+A LTP +H+DR+ FS+AI+KL+++N F+ I +L +L+T RPDL+ RF AHSIILY
Sbjct: 53 CRSACLTPYAHIDRITFSVAIDKLAKSNNFSYIDDFLTDLRTSRPDLRTVRFAAHSIILY 112
Query: 121 GQANMTEHAVRTFKEMDEHKLRH------SVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
GQA M + A+R FKE E SV NALL + +AK Y EV RVF++F K
Sbjct: 113 GQAGMIDQAIRLFKEYHEKNQNDVVLTSGSVKLLNALLFSCILAKKYDEVNRVFVDFSKR 172
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
Y I+P+L+T+N VI++FCES SSS YS+L EMD K +KPN ++FG L AGFY+EEKYED
Sbjct: 173 YKIEPNLETFNTVIQSFCESGSSSSCYSVLNEMDMKGVKPNETTFGHLFAGFYREEKYED 232
Query: 235 VNKVLQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
V V +M+E YG+ +G+ +YN+RIHSLCKL++ EA LL+ LSKG+ PN VTYSH I
Sbjct: 233 VGTVSKMIEEDYGISAGIGVYNIRIHSLCKLKRAREANVLLEGCLSKGITPNGVTYSHLI 292
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFC +G+ EEAK+ ++ M N G P S Y T+VYF+ KGGD+E+A CKES+ K V
Sbjct: 293 LGFCMEGDLEEAKRLFKSMENRGCQPAYSCYATLVYFLGKGGDFESAYRVCKESMGKKMV 352
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
PNF+TMK LV GLA + +V +AKELIG VKE+F+KN++ WNE+EAGLPQ
Sbjct: 353 PNFSTMKILVQGLASSGEVDKAKELIGEVKERFSKNIELWNEVEAGLPQ 401
>gi|297741760|emb|CBI32989.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/401 (55%), Positives = 274/401 (68%), Gaps = 53/401 (13%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
F+SRLR HR SSILS TPL+SK+K+RAAL+LLKSE +P++ILEI
Sbjct: 65 AFLSRLRP------ISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEI 118
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
CRAAALTPESHLDR
Sbjct: 119 CRAAALTPESHLDR---------------------------------------------- 132
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A M AVRTF++M + + +V + NALL + +AK+YKE R+F+EFPKTYGI+ +L
Sbjct: 133 -AGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 191
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D+YN V+KAF ES SSS YSILAEM RK +KPNA+SFG L+AGFY EEKYEDV KVL+M
Sbjct: 192 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKM 251
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME Y M+ G+S YN+RI SLCKL+K +EAKALLD +L++ MKPNS TY H I+GFCK+GN
Sbjct: 252 MEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGN 311
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EAKK ++ M N G P+S YFT+VYF+C+GGD+E+AL FCKE + KGW PN +TM S
Sbjct: 312 LDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTS 371
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
LV GL SKV EA+ELIG +KEKF++NVD WNEIEAGLPQ
Sbjct: 372 LVNGLVSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ 412
>gi|15221069|ref|NP_172629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200551|sp|Q9SAB4.1|PPR33_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11630, mitochondrial; Flags: Precursor
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity to gi|3367521 F8K4.8 from Arabidopsis thaliana
BAC gb|AC004392 [Arabidopsis thaliana]
gi|14326576|gb|AAK60332.1|AF385742_1 At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|19548051|gb|AAL87389.1| At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|21593339|gb|AAM65288.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|332190642|gb|AEE28763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/402 (50%), Positives = 295/402 (73%), Gaps = 3/402 (0%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDK-TRAALTLLKSESNPEKILE 60
F+ R+RT+ QK ++ SS S LTSK K +R L+LLKSE+NP++ILE
Sbjct: 2 AFLFRIRTS-EFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILE 60
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAHSIIL 119
ICR+ +L+P+ H+DR+ FS+A+ L+ +F +SQ L+ ++ +PD ++E F +IIL
Sbjct: 61 ICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIIL 120
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+ANM + +++TF+ ++++++ +V + NALL A +AKDYKE RV++E PK YGI+P
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL+TYNR+I+ CES +SS+YSI+AEM+RK IKP A+SFG ++ GFYKEEK+++V KV+
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MM+ +G+ GV+ YN+ I LCK +K AEAKAL+D ++S M+PNSVTYS I+GFC +
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N +EA + +M +G P+S YFT+++ +CKGGD+ETAL C+ES+ K WVP+F+ M
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLP 401
K LV GLA SKV EAKELI +VKEKFT+NVD WNE+EA LP
Sbjct: 361 KWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402
>gi|227463008|gb|ACP39956.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463010|gb|ACP39957.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 337
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/330 (58%), Positives = 237/330 (71%), Gaps = 4/330 (1%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
SR+RT+ S R+ SILS+ TPL++ KTRAAL LLKSE NP++IL I
Sbjct: 2 ALFSRIRTSATAASFHLRRF----SILSADSPTPLSAHQKTRAALCLLKSEQNPDRILNI 57
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
CRAA+LTP HLDR+AFS+AI+KLSE N+F I +L EL +RPDLQ+ERF +HS+ILYG
Sbjct: 58 CRAASLTPTFHLDRIAFSVAISKLSEGNHFQSIDTFLRELNSRPDLQHERFVSHSLILYG 117
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA M HA+ TF E S + NALL+A +AKDYKE KR+F+EFPK YGI+P+L
Sbjct: 118 QAKMLNHALTTFDEFYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEPNL 177
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+TYN IKA CES SSS YSIL +M K IKPNA++FG L+AGFY EEKYEDV KVL +
Sbjct: 178 ETYNTAIKALCESGSSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVLNL 237
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ +G+ GVS YN+RI SLC L+K EAKALLD MLSKG+ PNS TY+H IYG C+ GN
Sbjct: 238 MKEHGVSVGVSTYNIRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNHLIYGXCRGGN 297
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
EAKK ++ M N G P S YFT+ YF+
Sbjct: 298 LGEAKKVFKNMVNKGFEPESHCYFTLWYFL 327
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK-FYRIMSNSGLSPNSSVYFTMVYFMC 332
DE +KG ++ + + + +++EAK+ F G+ PN Y T + +C
Sbjct: 129 FDEFYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEPNLETYNTAIKALC 188
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVD 391
+ G + + +KG PN TT +L+ G K + +++ L+KE + V
Sbjct: 189 ESGSSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVLNLMKEHGVSVGVS 248
Query: 392 TWN 394
T+N
Sbjct: 249 TYN 251
>gi|224078640|ref|XP_002305587.1| predicted protein [Populus trichocarpa]
gi|222848551|gb|EEE86098.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 268/405 (66%), Gaps = 61/405 (15%)
Query: 6 RLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAA 65
RL++ L L + HH +L S+ +PL+S KTR AL+ LK+E+NPEKILEICR+A
Sbjct: 8 RLQSILPL-RRLHHHHLNFST-------SPLSSISKTRVALSRLKTETNPEKILEICRSA 59
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT-RPDLQNERFHAHSIILYGQAN 124
+LTPE+++DR+ FS+AI+KL+++N F+ I + L EL+T RPDL+ E+F AHSI+L+G+A
Sbjct: 60 SLTPEANIDRITFSVAIDKLAKSNNFSYIDELLTELRTSRPDLRTEQFAAHSIVLFGKAG 119
Query: 125 MTEHAVRTFKEMDEHKLRH------SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
M +HA+R FKE E SV N+LL + +AK Y EVKRVF++F K++ I+
Sbjct: 120 MIDHAIRLFKEYHEKNQNGVVLSSGSVKLLNSLLYSCILAKKYNEVKRVFVDFTKSFKIE 179
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+LDTYN +I+AF E SSS YSIL EMD+K +KPN ++ G L+ GFYKEEKYEDV KV
Sbjct: 180 PNLDTYNTIIQAFSEGGSSSSCYSILNEMDKKGVKPNTTTIGNLITGFYKEEKYEDVGKV 239
Query: 239 LQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
L+MME YG K+G+ +YN+RI SLCKL++ EA+ALL +++G+KP +VTY
Sbjct: 240 LKMMEEDYGTKAGIDIYNIRIRSLCKLKRSKEAEALLGGCIARGVKPKAVTYR------- 292
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+FE A YRI CK ES+ K VPN +
Sbjct: 293 ---DFESA---YRI--------------------CK------------ESMEKKLVPNSS 314
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
TMK LV GLA + V +AKELIG +KEKF+KNV+ WNE+EAGLPQ
Sbjct: 315 TMKMLVEGLASSGNVEKAKELIGEIKEKFSKNVELWNEVEAGLPQ 359
>gi|125528002|gb|EAY76116.1| hypothetical protein OsI_04043 [Oryza sativa Indica Group]
Length = 390
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/380 (46%), Positives = 257/380 (67%), Gaps = 17/380 (4%)
Query: 26 SILS-SGDKTPLTSKDKTRAALTLLKSESNP--EKILEICRAAALTPESHLDRLAFSIAI 82
SIL+ S TPLTS+ K+R A++LLKS +P ++IL ICRAAAL+P+SHLDR+A S+A
Sbjct: 25 SILNPSSPSTPLTSRQKSRLAISLLKSTPSPPPDQILSICRAAALSPDSHLDRVALSLAA 84
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
+KLS A + +L + L H+I L+GQA + AV TFK
Sbjct: 85 SKLSSA------PDSVRDLAS--SLLTPHHAPHAIALFGQAGLLPDAVSTFKS------S 130
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
S + NALL A ++ ++ E RVF FP Y +KP+ DT+N +IK+F ES + S YS
Sbjct: 131 PSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYS 190
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L EM +K +KPNA++F +AGFYKEE+++DV KV+++M+++G + ++NVR+ LC
Sbjct: 191 VLDEMCKKGVKPNATTFTTAIAGFYKEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLC 250
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
KL + +AKALL+EM+ KG KP+ +TY+H I+GFCK+G+ EEAK+ Y+ M+ GL +SS
Sbjct: 251 KLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSS 310
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y+ ++Y++CKGGD++TA+G E A+ WVP F+TMK LV GLAG+S+V EAK +I +
Sbjct: 311 FYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKM 370
Query: 383 KEKFTKNVDTWNEIEAGLPQ 402
KEKF + W E+E LPQ
Sbjct: 371 KEKFPDKAEGWKEVEDALPQ 390
>gi|20146263|dbj|BAB89045.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|20160842|dbj|BAB89782.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|215700983|dbj|BAG92407.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 390
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 178/380 (46%), Positives = 256/380 (67%), Gaps = 17/380 (4%)
Query: 26 SILS-SGDKTPLTSKDKTRAALTLLKS--ESNPEKILEICRAAALTPESHLDRLAFSIAI 82
SIL+ S TPLTS+ K+R A++LLKS P++IL ICRAAAL+P+SHLDR+A S+A
Sbjct: 25 SILNPSSPSTPLTSRQKSRLAISLLKSTPPPPPDQILSICRAAALSPDSHLDRVALSLAA 84
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
+KLS A + +L + L H+I L+GQA + AV TFK
Sbjct: 85 SKLSSA------PDSVRDLAS--SLLTPHHAPHAIALFGQAGLLPDAVSTFKS------S 130
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
S + NALL A ++ ++ E RVF FP Y +KP+ DT+N +IK+F ES + S YS
Sbjct: 131 PSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYS 190
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L EM +K +KPNA++F +AGFYKEE+++DV KV+++M+++G + ++NVR+ LC
Sbjct: 191 VLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLC 250
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
KL + +AKALL+EM+ KG KP+ +TY+H I+GFCK+G+ EEAK+ Y+ M+ GL +SS
Sbjct: 251 KLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSS 310
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y+ ++Y++CKGGD++TA+G E A+ WVP F+TMK LV GLAG+S+V EAK +I +
Sbjct: 311 FYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKM 370
Query: 383 KEKFTKNVDTWNEIEAGLPQ 402
KEKF + W E+E LPQ
Sbjct: 371 KEKFPDKAEGWKEVEDALPQ 390
>gi|242054647|ref|XP_002456469.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
gi|241928444|gb|EES01589.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
Length = 392
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/380 (46%), Positives = 255/380 (67%), Gaps = 17/380 (4%)
Query: 26 SILS-SGDKTPLTSKDKTRAALTLLKSESNP--EKILEICRAAALTPESHLDRLAFSIAI 82
SIL+ S TPLTS++KTR A++LLKS P ++IL ICRAAALTPE+H+DR+A S+A
Sbjct: 27 SILNPSSPSTPLTSREKTRLAISLLKSSPPPPPDQILSICRAAALTPETHIDRIALSLAA 86
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
+KLS A L +L + + R H+I+L+GQAN+ A+ TF+
Sbjct: 87 SKLSSA------PDTLRDLAS--TVLTPRHAPHAIVLFGQANLLPDAISTFQS------S 132
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
S + NAL+ A ++ ++ E RVF FP +G+KP+ +T+N +IK+F ES S YS
Sbjct: 133 PSTRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFYS 192
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ EM +K +KPNA++F +AGFYKEE+++DV KVL++M++ G + +YNVR+ SLC
Sbjct: 193 VFDEMCKKGLKPNATTFTTALAGFYKEERFDDVGKVLELMKKNGCGESLPVYNVRVQSLC 252
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
KL + EA+AL+DEM+ KG KP+ VTY+H IYGFCK+G+ EEAK+ Y+ M GL + +
Sbjct: 253 KLGRSGEARALVDEMVKKGTKPSWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDIN 312
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
YF +++++CKG D++TALG E AK WVP F+TMK LV GLAG+S++ EAK +I +
Sbjct: 313 FYFMLIHYLCKGDDFDTALGVYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKM 372
Query: 383 KEKFTKNVDTWNEIEAGLPQ 402
KEKF + W E+E LP
Sbjct: 373 KEKFPDKTEGWKEVEEALPH 392
>gi|226490900|ref|NP_001141371.1| uncharacterized protein LOC100273462 [Zea mays]
gi|194704218|gb|ACF86193.1| unknown [Zea mays]
gi|414880165|tpg|DAA57296.1| TPA: hypothetical protein ZEAMMB73_527047 [Zea mays]
Length = 393
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/381 (46%), Positives = 251/381 (65%), Gaps = 17/381 (4%)
Query: 25 SSILS-SGDKTPLTSKDKTRAALTLLKSESNP--EKILEICRAAALTPESHLDRLAFSIA 81
+SIL+ S TPLTS+ KTR A++LLKS P ++IL ICRAAALTPE+H+DR+A S+A
Sbjct: 27 ASILNPSSPSTPLTSRHKTRLAISLLKSSPPPPPDQILSICRAAALTPETHIDRIALSLA 86
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+KLS A L +L + + R H+I L+GQA++ A+ TF+
Sbjct: 87 ASKLSSA------PDTLRDLAS--TVLTPRHAPHAIALFGQAHLLPDAISTFQS------ 132
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
S + NAL+ A ++ ++ E RVF FP +G+KP+ +T+N +IK+F ES S Y
Sbjct: 133 SPSTRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFY 192
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ EM +K +KPN+ +F +AGFYKEEK++D+ KVL++M++ G + +YNVR+ SL
Sbjct: 193 SVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSL 252
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CKL + EA+AL+DEM+ KG KPN VTY+H IYGFCK+G+ EEAK+ Y+ M GL +S
Sbjct: 253 CKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDS 312
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
YF ++Y++CKG D +TALG E AK WVP F+TMK LV GLAG+S++ EAK +I
Sbjct: 313 DFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEK 372
Query: 382 VKEKFTKNVDTWNEIEAGLPQ 402
+KEKF + W E+E P
Sbjct: 373 MKEKFPDKTEGWKEVEEAFPH 393
>gi|195620494|gb|ACG32077.1| membrane-associated salt-inducible protein [Zea mays]
Length = 393
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/381 (46%), Positives = 251/381 (65%), Gaps = 17/381 (4%)
Query: 25 SSILS-SGDKTPLTSKDKTRAALTLLKSESNP--EKILEICRAAALTPESHLDRLAFSIA 81
+SIL+ S TPLTS+ KTR A++LLKS P ++IL ICRAAALTPE+H+DR+A S+A
Sbjct: 27 ASILNPSSPSTPLTSRHKTRLAISLLKSSPPPPPDQILSICRAAALTPETHIDRIALSLA 86
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+KLS A L +L + + R H+I L+GQA++ A+ TF+
Sbjct: 87 ASKLSSA------PDTLRDLAS--TVLTPRHAPHAIALFGQAHLLPDAISTFQS------ 132
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
S + NAL+ A ++ ++ E RVF FP +G+KP+ +T+N +IK+F ES S Y
Sbjct: 133 SPSTRSLNALIFACIVSGNHTEXARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFY 192
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ EM +K +KPN+ +F +AGFYKEEK++D+ KVL++M++ G + +YNVR+ SL
Sbjct: 193 SVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSL 252
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CKL + EA+AL+DEM+ KG KPN VTY+H IYGFCK+G+ EEAK+ Y+ M GL +S
Sbjct: 253 CKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDS 312
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
YF ++Y++CKG D +TALG E AK WVP F+TMK LV GLAG+S++ EAK +I
Sbjct: 313 DFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEK 372
Query: 382 VKEKFTKNVDTWNEIEAGLPQ 402
+KEKF + W E+E P
Sbjct: 373 MKEKFPDKTEGWKEVEEAFPH 393
>gi|357125390|ref|XP_003564377.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Brachypodium
distachyon]
Length = 390
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 249/380 (65%), Gaps = 17/380 (4%)
Query: 26 SILSSGDKT-PLTSKDKTRAALTLLKSESNP--EKILEICRAAALTPESHLDRLAFSIAI 82
SIL+ T LTS+ KTR A++LLKS P ++IL ICRAAAL+P +HLDR+A S+A
Sbjct: 25 SILNPSSPTSALTSRQKTRLAISLLKSSPPPPPDQILSICRAAALSPNTHLDRVALSLAT 84
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
++LS A L +L + L H+I L+GQA + A+ TF+
Sbjct: 85 SRLSSA------PDSLRDLTS--SLLIPHHAPHAIALFGQAGLLPDAISTFQSSP----- 131
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
S + NALL A +A ++ E R+F FP + +KP+ +T+N +IK+F ES + S YS
Sbjct: 132 -STRSLNALLFACLVAGNHAEAARIFQTFPDAHNVKPNTETFNAIIKSFSESGTTRSFYS 190
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ EM +K +KPNA++F +AGFYKEE++ DV KV+++M+++G + +YN R+ LC
Sbjct: 191 VFDEMCKKGVKPNATTFTTAIAGFYKEEQFGDVEKVIELMKKHGCGESLQVYNARVQGLC 250
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
KL + EAKALL+EM+ +G KP+ VTY+H IYGFCK+G+ EE K+ Y+ M GL +SS
Sbjct: 251 KLGRSGEAKALLNEMVKRGTKPSWVTYNHLIYGFCKEGDLEEVKRLYKEMGKKGLVGDSS 310
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
YFT+++++CK GD+++ALG E+ A+ WVP F+TMK LV GLAG+SKV EAK +I +
Sbjct: 311 FYFTLIFYLCKAGDFDSALGVYNETTARSWVPCFSTMKMLVNGLAGSSKVDEAKGIIEKM 370
Query: 383 KEKFTKNVDTWNEIEAGLPQ 402
KEKF + W E+E LPQ
Sbjct: 371 KEKFPDKAEGWKEVEEALPQ 390
>gi|359494844|ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Vitis vinifera]
Length = 336
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/318 (54%), Positives = 229/318 (72%), Gaps = 18/318 (5%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
F+SRLR ++S HR SSILS TPL+SK+K+RAAL+LLKSE +P++ILEI
Sbjct: 2 AFLSRLRP---IYS---HRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEI 55
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
CRAAALTPESHLDR+AFS+AI+KL+++ +F+ I +L+ELK RPDL+ ERF +H+I+L+G
Sbjct: 56 CRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFG 115
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA M AVRTF++M + + +V + NALL + +AK+YKE R+F+EFPKTYGI+ +L
Sbjct: 116 QAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 175
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D+YN V+KAF ES SSS YSILAEM RK +KPNA+SFG L+AGFY EEKYEDV VL+M
Sbjct: 176 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGXVLKM 235
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS-----------KGMKPNSVTYS 290
ME Y M+ G+S YN+R SLCKL+ +E +ALLD +L+ KG PN T +
Sbjct: 236 MEEYXMQPGISTYNIRXQSLCKLKXSSE-RALLDGILARRMXXXXXXYEKGWXPNISTMT 294
Query: 291 HFIYGFCKDGNFEEAKKF 308
+ G EEA++
Sbjct: 295 SLVNGLXSISKVEEAREL 312
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT---YNRVIKAFCESSDSSSAYSI 203
AF+ + L +K + ++ E +PDL T + I F ++ + A
Sbjct: 71 AFSVAISKLADSKHFDSIRHFLDELKA----RPDLRTERFVSHAIVLFGQAGMLNDAVRT 126
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHSLC 262
+M + + S AL+ + Y++ N++ L+ + YG++ + YN + +
Sbjct: 127 FEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFS 186
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ + ++L EM KG+KPN+ ++ + GF + +E+ ++M + P S
Sbjct: 187 ESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGXVLKMMEEYXMQPGIS 246
Query: 323 VYFTMVYFMCK----------GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
Y +CK G + KGW PN +TM SLV GL SKV
Sbjct: 247 TYNIRXQSLCKLKXSSERALLDGILARRMXXXXXXYEKGWXPNISTMTSLVNGLXSISKV 306
Query: 373 SEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
EA+ELIG +KEKF++NVD WNEIEAGLPQ
Sbjct: 307 EEARELIGQIKEKFSRNVDKWNEIEAGLPQ 336
>gi|125572292|gb|EAZ13807.1| hypothetical protein OsJ_03733 [Oryza sativa Japonica Group]
Length = 351
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 234/380 (61%), Gaps = 56/380 (14%)
Query: 26 SILS-SGDKTPLTSKDKTRAALTLLKS--ESNPEKILEICRAAALTPESHLDRLAFSIAI 82
SIL+ S TPLTS+ K+R A++LLKS P++IL ICRAAAL+P+SHLDR
Sbjct: 25 SILNPSSPSTPLTSRQKSRLAISLLKSTPPPPPDQILSICRAAALSPDSHLDR------- 77
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
A + AV TFK
Sbjct: 78 ----------------------------------------AGLLPDAVSTFKS------S 91
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
S + NALL A ++ ++ E RVF FP Y +KP+ DT+N +IK+F ES + S YS
Sbjct: 92 PSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYS 151
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L EM +K +KPNA++F +AGFYKEE+++DV KV+++M+++G + ++NVR+ LC
Sbjct: 152 VLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLC 211
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
KL + +AKALL+EM+ KG KP+ +TY+H I+GFCK+G+ EEAK+ Y+ M+ GL +SS
Sbjct: 212 KLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSS 271
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y+ ++Y++CKGGD++TA+G E A+ WVP F+TMK LV GLAG+S+V EAK +I +
Sbjct: 272 FYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKM 331
Query: 383 KEKFTKNVDTWNEIEAGLPQ 402
KEKF + W E+E LPQ
Sbjct: 332 KEKFPDKAEGWKEVEDALPQ 351
>gi|326528779|dbj|BAJ97411.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534194|dbj|BAJ89447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/384 (44%), Positives = 250/384 (65%), Gaps = 25/384 (6%)
Query: 26 SILS-SGDKTPLTSKDKTRAALTLLKSESNP--EKILEICRAAALTPESHLDRLAFSIAI 82
SIL+ S TPLT++ KTR A++LLKS P ++IL ICRAAAL+P++HLDR+A S+A
Sbjct: 25 SILNPSSPTTPLTTRQKTRLAISLLKSSPPPPPDQILSICRAAALSPKTHLDRVALSLAT 84
Query: 83 NKLSEANYFNGISQYLEELKTR---PDLQNERFHAH-SIILYGQANMTEHAVRTFKEMDE 138
++LS A L +L + PD HAH +I+L+GQA + A+ TF+
Sbjct: 85 SRLSTA------PDSLRDLTSSLLIPD------HAHHAIVLFGQAGLLPDAISTFQSSP- 131
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
S + NALL A +A ++ E R+F FP + +KP+ +T+N +IK+F ES +
Sbjct: 132 -----STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTR 186
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
S YS+ EM ++ +KP A++F A +AGFYKEE+++DV KV+++M+++G + +YN R+
Sbjct: 187 SFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARV 246
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
LCKL + +AKALL EM KG KP+ VTY+H IYGFCK+G+ EE K+ Y+ M GL
Sbjct: 247 QGLCKLGRNGDAKALLSEMAKKGTKPSWVTYNHLIYGFCKEGDLEEVKRLYKEMGMKGLV 306
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+S+ YFT+++ +CK GD++TAL E + W+P F+TMK LV GLAG+S++ EAK +
Sbjct: 307 GDSNFYFTVIFHLCKAGDFDTALSVYNEIAPRNWIPCFSTMKMLVNGLAGSSRIDEAKGI 366
Query: 379 IGLVKEKFTKNVDTWNEIEAGLPQ 402
I +KEKF W E+E LPQ
Sbjct: 367 IEKMKEKFPDRDAGWKEVEEALPQ 390
>gi|210077731|gb|ACJ07054.1| putative membrane-associated salt-inducible protein [Aegilops
speltoides]
Length = 289
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 199/303 (65%), Gaps = 14/303 (4%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
++IL ICRAAAL+P++HLDR+A S+A ++LS A L +L + + + HA
Sbjct: 1 DQILSICRAAALSPKTHLDRVALSLATSRLSTA------PDSLRDLTSSLLIPHHAHHA- 53
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I+L+GQA + A+ TF+ S + NALL A +A ++ E R+F FP +
Sbjct: 54 -IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAH 106
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+KP+ +T+N +IK+F ES + S YS+ EM ++ +KP A++F A +AGFYKEE+++DV
Sbjct: 107 RVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDV 166
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV+++M+++G + +YN R+ LCKL + +AKALL EM KG KPN VTY+H IYG
Sbjct: 167 EKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYG 226
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK+G+ EEAK+ Y+ M GL +S YFT+++ +CK GD++TALG E I + WVP
Sbjct: 227 FCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPC 286
Query: 356 FTT 358
F+T
Sbjct: 287 FST 289
>gi|210077729|gb|ACJ07053.1| putative membrane-associated salt-inducible protein [Secale
cereale]
Length = 289
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 199/303 (65%), Gaps = 14/303 (4%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
++IL ICRAAAL+P++HLDR+A S+A ++LS A L +L + + + HA
Sbjct: 1 DQILSICRAAALSPKTHLDRVALSLATSRLSTA------PASLRDLTSSLLIPHHAHHA- 53
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I+L+GQA + A+ TF+ S + NALL A +A ++ E R+F FP +
Sbjct: 54 -IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAH 106
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+KP+ +T+N +IK+F ES + S YS+ EM ++ +KP A++F A +AGFYKEE+++DV
Sbjct: 107 RVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKEGVKPTATTFTAAIAGFYKEERFDDV 166
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV+++M+++G + +YN R+ LCKL + +AKALL EM KG KPN VTY+H IYG
Sbjct: 167 EKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYG 226
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK+G+ EEAK+ Y+ M GL +S YFT+++ +CK GD++TALG E I + WVP
Sbjct: 227 FCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPC 286
Query: 356 FTT 358
F+T
Sbjct: 287 FST 289
>gi|115440435|ref|NP_001044497.1| Os01g0793200 [Oryza sativa Japonica Group]
gi|113534028|dbj|BAF06411.1| Os01g0793200, partial [Oryza sativa Japonica Group]
Length = 235
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 172/235 (73%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F FP Y +KP+ DT+N +IK+F ES + S YS+L EM +K +KPNA++F +AGFY
Sbjct: 1 FQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFY 60
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KEE+++DV KV+++M+++G + ++NVR+ LCKL + +AKALL+EM+ KG KP+ +
Sbjct: 61 KEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWL 120
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+H I+GFCK+G+ EEAK+ Y+ M+ GL +SS Y+ ++Y++CKGGD++TA+G E
Sbjct: 121 TYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEI 180
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
A+ WVP F+TMK LV GLAG+S+V EAK +I +KEKF + W E+E LPQ
Sbjct: 181 AARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKMKEKFPDKAEGWKEVEDALPQ 235
>gi|210077735|gb|ACJ07056.1| putative membrane-associated salt-inducible protein [Triticum
urartu]
Length = 289
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 198/303 (65%), Gaps = 14/303 (4%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
++IL ICRAAAL+P++HLDR+A S+A ++LS A L +L + + + HA
Sbjct: 1 DQILSICRAAALSPKTHLDRVALSLATSRLSTA------PDSLRDLTSSLLIPHHAHHA- 53
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I+L+GQA + A+ TF+ S + NALL A +A ++ E R+F FP +
Sbjct: 54 -IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHTEAARIFQTFPDAH 106
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+KP+ +T+N +IK+F ES + S YS+ EM ++ +KP A++F A +AGFYKEE+++DV
Sbjct: 107 RVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDV 166
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV+++M+++ + +YN R+ LCKL + +AKALL EM KG KPN VTY+H IYG
Sbjct: 167 EKVIKLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYG 226
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK+G+ EEAK+ Y+ M GL +S YFT+++ +CK GD++TALG E I + WVP
Sbjct: 227 FCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPC 286
Query: 356 FTT 358
F+T
Sbjct: 287 FST 289
>gi|210077733|gb|ACJ07055.1| putative membrane-associated salt-inducible protein [Triticum
monococcum]
Length = 277
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 188/291 (64%), Gaps = 14/291 (4%)
Query: 68 TPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE 127
+P++HLDR+A S+A ++LS A L +L + + + HA I+L+GQA +
Sbjct: 1 SPKTHLDRVALSLATSRLSTA------PDSLRDLTSSLLIPHHAHHA--IVLFGQAGLLP 52
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ TF+ S + NALL A +A ++ E R+F FP + +KP+ +T+N +
Sbjct: 53 DAITTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNSI 106
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IK+F ES + S YS+ EM ++ +KP A++F A +AGFYKEE+++DV KV+++M+++G
Sbjct: 107 IKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGC 166
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ +YN R+ LCKL + +AKALL EM KG KPN VTY+H IYGFCK+G+ EEAK+
Sbjct: 167 GESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAKR 226
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y+ M GL +S YFT+++ +CK GD++TALG E I + WVP F+T
Sbjct: 227 LYKEMGKKGLVGDSGFYFTVIFHLCKSGDFDTALGVYNEIIPRNWVPCFST 277
>gi|194707518|gb|ACF87843.1| unknown [Zea mays]
gi|219888485|gb|ACL54617.1| unknown [Zea mays]
Length = 196
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 139/196 (70%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M +K +KPN+ +F +AGFYKEEK++D+ KVL++M++ G + +YNVR+ SLCKL +
Sbjct: 1 MCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA+AL+DEM+ KG KPN VTY+H IYGFCK+G+ EEAK+ Y+ M GL +S YF
Sbjct: 61 SGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFM 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++Y++CKG D +TALG E AK WVP F+TMK LV GLAG+S++ EAK +I +KEKF
Sbjct: 121 LIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKMKEKF 180
Query: 387 TKNVDTWNEIEAGLPQ 402
+ W E+E P
Sbjct: 181 PDKTEGWKEVEEAFPH 196
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 149 NALLLALTIAKDYKE-----VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
N++ +A YKE +K+V +E K G L YN +++ C+ S A ++
Sbjct: 9 NSITFTTALAGFYKEEKFDDIKKV-LELMKKNGCGESLPVYNVRVQSLCKLGRSGEARAL 67
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+ EM +K KPN ++ L+ GF KE E+ ++ + M R G+ Y + I+ LCK
Sbjct: 68 VDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFMLIYYLCK 127
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
A L +E+ +K P T + G +EAK
Sbjct: 128 GDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAK 170
>gi|255553141|ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543245|gb|EEF44777.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 400
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 193/350 (55%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGIS 95
L K AL LK+E +PEK+ + +A A +R AF I++L+ A F+ I
Sbjct: 32 LNQKPLEEPALAKLKAERDPEKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIE 91
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
LE KT P + E F I+LYG+A MT+HAV TF +M + + +V +FNA L L
Sbjct: 92 HLLEHQKTLPQGRREGFIIRIIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNAALKVL 151
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
T D + +K E P+ + I D+ + N +IKAFC+ S AY ++ +M+R I+P+
Sbjct: 152 TETCDLEAIKAFLSEVPEKFDIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPD 211
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L++ FYK +++E N + +M G +S +NVRI L +R+ +A ++
Sbjct: 212 VVTYTTLISAFYKNDRWEISNGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVML 271
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M G+ P+ VTY+ I GF + G E A++ Y + G PN +Y TM++ +CKGG
Sbjct: 272 LMERIGISPDEVTYNLVIKGFGQAGYLEMARRVYSALHGKGYKPNVKIYQTMIHCLCKGG 331
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+++ A CK+ + K W N T+ +L+ GL ++ +AK ++ L + +
Sbjct: 332 EFDLAYTMCKDCMKKSWFLNVDTIHTLLDGLKKNGQLDKAKMIVTLAQRR 381
>gi|359482337|ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 193/348 (55%), Gaps = 3/348 (0%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LK+E +PE++ ++ +A A +R AF +++L+ A F+ I LE KT
Sbjct: 45 ALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTL 104
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A M + AV TF +M + +V +FNA L LT + D + +
Sbjct: 105 PQGRREGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAI 164
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ P +GI+ D+ + N VIKA C+ AY ++ EM++ + P+ ++ L++
Sbjct: 165 DLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLIS 224
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
FYK ++E N + +M G ++ +NVRI L R+ +A +L+ M G+ P
Sbjct: 225 AFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITP 284
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+ VTY+ I GFC+ G E AKK Y + G PN +Y TM++++CKGG+++ A C
Sbjct: 285 DEVTYNLVIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMC 344
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK---FTKN 389
K+ + + W N T+ L+ GL G ++ +AK ++ L +++ F+KN
Sbjct: 345 KDCMNRNWSLNVDTIYKLLEGLKGNGEIDKAKVILRLARKRVPSFSKN 392
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 202/358 (56%), Gaps = 4/358 (1%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKT 103
A ++L+SE +P++ LEI + + S L R A + + +L+++ F I +E K
Sbjct: 42 AKSILRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKN 101
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
P + E + + I YG A M +HA+RTF +M+E S +FNALL A +K + +
Sbjct: 102 DPKITQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQ 161
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
V + F E P+ YGI PD +Y ++K++CES S A S+L EM+ K ++ A +F ++
Sbjct: 162 VPKFFEEIPRRYGIXPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTIL 221
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
YK+ + + KV M + G V YNV+I KAL+DEM + G+K
Sbjct: 222 DALYKQGQSDRAEKVWHEMAKKGCLD-VGAYNVKIM-FAHGGDPENVKALIDEMSNAGLK 279
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P++++Y++ + +CK G +EAKK Y + +G PN++ + T++Y++C+ GD+ET
Sbjct: 280 PDTISYNYLMTSYCKSGMMDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKV 339
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
K+S + +P+F T++ LV GL K EAK LI VK+ F N ++ W ++E L
Sbjct: 340 FKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDL 397
>gi|449468996|ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 207/379 (54%), Gaps = 9/379 (2%)
Query: 20 RYLATSSILSSGDKTPLT------SKDKTRAALTLLKSESNPEKILEICRAAALTPESHL 73
R+ ++++ S D T SK AL LK+E +PEK+ + +A A
Sbjct: 9 RFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIE 68
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+R AF +++L+ A F+ I LE KT P + E F I+LYG+A M +HA+ TF
Sbjct: 69 NRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTF 128
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + +V +FNA+L L ++D ++ E P+ + I+ D+ + N ++KAFC+
Sbjct: 129 YDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCD 188
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ AY ++ EM++ IKP+ ++ L++ YK+ + E N + +M G ++
Sbjct: 189 FGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTT 248
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NVRI L + R+ +A L+ M + G+ P+ VTY+ I GFC+ G + AK+ Y +
Sbjct: 249 FNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALH 308
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SG PN +Y TM++++CK D+ A CK+++ K W PN T+ SL+ GL +
Sbjct: 309 GSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAG 368
Query: 374 EAKELIGLVKEK---FTKN 389
+A+ ++ L +++ F+KN
Sbjct: 369 KAQLILALARKRVPPFSKN 387
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 202/358 (56%), Gaps = 4/358 (1%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKT 103
A ++L+SE +P++ LEI + + S L R A + + +L+++ F I +E K
Sbjct: 40 AKSILRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKN 99
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
P + E + + I YG A M +HA+RTF +M+E S +FNALL A +K + +
Sbjct: 100 DPKITQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQ 159
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
V + F E P+ YG+ PD +Y ++K++CES S A S+L EM+ K ++ A +F ++
Sbjct: 160 VPKFFEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTIL 219
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
YK+ + + KV M + G V YNV+I KAL+DEM + G+K
Sbjct: 220 DALYKQGQSDRAEKVWHEMAKKGCLD-VGAYNVKIM-FAHGGDPENVKALIDEMSNAGLK 277
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P++++Y++ + +CK G +EAKK Y + +G PN++ + T++Y++C+ GD+ET
Sbjct: 278 PDTISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKV 337
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
K+S + +P+F T++ LV GL K EAK LI VK+ F N ++ W ++E L
Sbjct: 338 FKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDL 395
>gi|338762831|gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 197/361 (54%), Gaps = 3/361 (0%)
Query: 42 TRAALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNGISQYLEE 100
T A + L+ +P+K LEI + + S L R + +L++++ F+ I +LE
Sbjct: 43 TSRAKSQLRYVYDPDKALEIYSSVSPNYTSPLSSRYTQEYTVRRLAKSHRFSDIESFLES 102
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
K P + E F + I YG A M +HA++TF EMD+ S +FNALL A +K+
Sbjct: 103 HKNDPKITQEPFLSSLIRSYGLAGMFDHALKTFNEMDDLGTPRSTVSFNALLSACNSSKN 162
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ +F E P+ YG+ PD +Y +IKA+CE SA L EM+ K I+ A +F
Sbjct: 163 FGRAPELFDEVPQRYGLSPDKFSYGNLIKAYCEMGSPESALERLKEMEEKGIEITAVTFT 222
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ FYK+ K E+ +V M + G V YNVRI + K L++E+ S
Sbjct: 223 TIMHSFYKKGKNEEAERVWSEMVKRGCPIDVGAYNVRIMHIHG-EDPDSVKGLIEEISSA 281
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+KP++++Y++ + +CK G +EA K Y + +G PN++ + T+++++CK +ET
Sbjct: 282 GLKPDTISYNYLMTSYCKSGMMDEAFKVYEDLEGNGCKPNAATFRTLIFYLCKRQRFETG 341
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAG 399
KES+A +P+F T+K L+ GL SK EAK +I VK+KF N V W ++
Sbjct: 342 YKVFKESVAVHKIPDFNTLKHLLEGLVKRSKFKEAKGMIRTVKKKFPPNVVKAWERLQKE 401
Query: 400 L 400
L
Sbjct: 402 L 402
>gi|357455193|ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486925|gb|AES68128.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 439
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 188/341 (55%), Gaps = 1/341 (0%)
Query: 42 TRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
++ AL LKSE +P K+ I ++ A P +R AF +++L+ A F+ I Q LE+
Sbjct: 76 SKPALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQ 135
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
K P + E F I LYG A M +HA+ TF +M + + +V +FNA L L ++D+
Sbjct: 136 KKLPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDF 195
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFG 220
E+ R E P+ + I+ D+ + N +KAFCE+ AY + + ++ K +KP+ ++
Sbjct: 196 DEISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYT 255
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L++ FY +++E N + M G+ + +NVRI L +R+ +A L+ M
Sbjct: 256 TLISAFYDHKRWEIGNGLWNQMVLKGVMPNLHTFNVRIQFLVTVRRVWDANKLMALMQRN 315
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+ P+ VT I GF + G E A + Y + + G ++++Y TM++ +CK GD+ A
Sbjct: 316 GVTPDEVTLVLVIKGFFRAGYPEMAMRVYSALHDKGYKISANIYQTMIHNLCKRGDFSQA 375
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
CK+S+ K W PN T+ L+ GL + K+++AK ++ L
Sbjct: 376 YTLCKDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIVAL 416
>gi|449438040|ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 210/403 (52%), Gaps = 8/403 (1%)
Query: 4 ISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICR 63
+ R L L S+ H +T+ L +P S RAA + + S+S+P+K+ +
Sbjct: 5 LPRTPRRLFLISRLHSFSYSTTPPLQPTSDSPFPS---LRAAKSAILSQSDPDKLAQSFI 61
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ P R + +I KL+ A F+ I ++ P +E F I+LY
Sbjct: 62 QASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVIIQSHHKSPSATSEGFWIRLIMLYSSV 121
Query: 124 NMTEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
M A+ + HK S + A+L ++V +F P+ G+ P
Sbjct: 122 GMVNQALYILDQAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTAV 181
Query: 183 TYNRVIKAFCESSDSSSAYSILAEM--DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
++N V+KAF +D SA + + E+ D + PN SF L+ ++ +++ +
Sbjct: 182 SHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGFDEIEK 241
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+ + G++ ++ YN RI LCK ++CA AK +LDEM+SKG+KPNS +Y I+G+C G
Sbjct: 242 EISKRGLEFNLATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDVG 301
Query: 301 NFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ E A K + I+ + +SP S +Y+ ++ M K G++E AL C+E+I + WVP F M
Sbjct: 302 DIESAMKILKGILEDGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPFEAM 361
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGLP 401
++LV GL SKV EAKE++ +K++ VD+W +IEA LP
Sbjct: 362 EALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEAALP 404
>gi|224070831|ref|XP_002303255.1| predicted protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 196/363 (53%), Gaps = 5/363 (1%)
Query: 23 ATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAI 82
A S+ + + ++ PL AL LK+E +PEK+ + +A A +R AF +
Sbjct: 25 AVSNRIQNQNQKPLEE-----PALVKLKAERDPEKLFNLFKANAENRLVVENRFAFEDTV 79
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
++L+ AN F+ I LE K P + E F I+LYG+A M +HA+ TF M H +
Sbjct: 80 SRLAGANRFDYIEHLLEHQKPLPQGRREGFMVRIIMLYGKAGMIKHAIDTFYNMHLHGCK 139
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V + NA L LT +D ++ E PK + I+ D+ + N ++KA CE+ + AY
Sbjct: 140 RTVKSVNAALKVLTGTRDLAAIEAFVNEAPKKFDIELDIFSVNIIVKALCETGNLDKAYL 199
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
++ EM++ ++P+ ++ L++ FYK + E N + +M G ++ +NVRI L
Sbjct: 200 LMVEMEKSGVRPDVITYTTLMSAFYKNNRSEIGNGLWNLMVLKGCLPNLATFNVRIQYLV 259
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+R+ A ++ ML G+ P+ VTY+ I GF + G E AK Y + G N
Sbjct: 260 NIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKGFFQTGKLEMAKMVYFSLRGKGHKFNVK 319
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
VY TMV+++CKGG+++ A C++ + W N T+ +L+ GL ++++AK ++ L
Sbjct: 320 VYQTMVHYLCKGGEFDLAYTMCRDCMRNNWFLNVDTIHTLLEGLKKNGQLNKAKVIVTLA 379
Query: 383 KEK 385
+++
Sbjct: 380 QKR 382
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 188/346 (54%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
TP T+ T T+ E +K+++ + ++ +PE +S + +LS A F+
Sbjct: 14 TPKTTSTATIPPSTVNTKERKLQKLVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSM 73
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ +LE K D+ NE+F I LYG+A M +HA R F EM + K +V +FNALL
Sbjct: 74 VEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLS 133
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
A + + +V+ +FP GI PD+ ++N VIK +CE + S +L EM+++ I+
Sbjct: 134 ACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIE 193
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ +F L+ GFY ++ D K+ +ME + V YN R+ L + EA L
Sbjct: 194 PDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELENRVMEAVEL 253
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM +KG++P+ ++Y+ I G C D N EE K +YR + +G P+ Y T++ ++ +
Sbjct: 254 LGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLIPYLRQ 313
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
GD + A+ C E + KG + N T + +V L S+V EAK+L+
Sbjct: 314 KGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRVEEAKDLV 359
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 40/268 (14%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
E E + RH ++ ++ L+ AK + V+ F+E K + + R+I + ++
Sbjct: 47 ESPEFRARHRF--YSTIVRRLSFAKQFSMVED-FLEHQKNFADITNEQFTIRLISLYGKA 103
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME-RYGMKSGVSM 253
A+ + EM SF AL++ K++ V L+ + G+ V
Sbjct: 104 GMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVS 163
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ I C++ +L EM +G++P+ +T++ + GF +G F + +K + +M
Sbjct: 164 FNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLME 223
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+K VPN + S + GL ++V
Sbjct: 224 -----------------------------------SKNVVPNVRSYNSRLRGLELENRVM 248
Query: 374 EAKELIGLVKEKFTK-NVDTWNEIEAGL 400
EA EL+G ++ K + +V ++N + GL
Sbjct: 249 EAVELLGEMENKGIRPDVMSYNAVIKGL 276
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N AV EM+ +R V ++NA++ L ++ +EVK + + K G PD T
Sbjct: 245 NRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKL-KENGRMPDRVT 303
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
Y +I + D A + E+ K + NA+ F +V K + E+ +++
Sbjct: 304 YMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRVEEAKDLVE 360
>gi|297842851|ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335148|gb|EFH65566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 184/341 (53%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LKSE +PEK+ ++ +A A +R AF +++L+ A + I LE KT
Sbjct: 41 ALVKLKSERDPEKLFKLFQANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTL 100
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A MT+ A+ TF MD + + SV +FNA L L+ D +
Sbjct: 101 PQGRREGFIVRIIMLYGKAGMTKQALDTFYNMDLYGCKRSVKSFNAALQVLSFKPDLHTI 160
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ + P Y I D ++N IK+FCE AY + EM++ +KP+ ++ L++
Sbjct: 161 REFLHDAPAKYRIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLKPDVVTYTTLIS 220
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
FYK E+ N + +M G + ++ +NVRI L R+ +A LL M ++P
Sbjct: 221 AFYKHERCVIGNGLWNLMVLKGCRPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+S+TY+ I GF A++ Y M G PN +Y TM++++CK G+++ A C
Sbjct: 281 DSITYNMVIKGFFLARFPHMAERVYTAMHGKGYKPNVKIYQTMIHYLCKAGNFDLAYTMC 340
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K+ + K W PN T++ L+ GL ++ +AK ++GLV ++
Sbjct: 341 KDCMRKKWYPNLDTVEMLLKGLVKKDQLDQAKSIMGLVHKR 381
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 97/271 (35%), Gaps = 52/271 (19%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK- 102
AAL +L + + I E A +D ++F+IAI E +G + E++
Sbjct: 146 AALQVLSFKPDLHTIREFLHDAPAKYRIDIDAVSFNIAIKSFCELGILDGAYMAMREMEK 205
Query: 103 --TRPDLQN-----ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+PD+ F+ H + G G +N ++L
Sbjct: 206 SGLKPDVVTYTTLISAFYKHERCVIGN-----------------------GLWNLMVLK- 241
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
G +P+L T+N I+ + A +L M + ++P+
Sbjct: 242 --------------------GCRPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPD 281
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ++ ++ GF+ +V M G K V +Y IH LCK A +
Sbjct: 282 SITYNMVIKGFFLARFPHMAERVYTAMHGKGYKPNVKIYQTMIHYLCKAGNFDLAYTMCK 341
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + K PN T + G K ++AK
Sbjct: 342 DCMRKKWYPNLDTVEMLLKGLVKKDQLDQAK 372
>gi|225425092|ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 198/361 (54%), Gaps = 7/361 (1%)
Query: 44 AALTLLKSESNPEKILEICRAAALT-PESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
AA + ++SE +PEK+ I + R + ++ +LS + + + + ++ K
Sbjct: 29 AAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRSGRLDLVERLIDHQK 88
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
T P + E F I+LY + M +HA+RTF +M + +++ + + A+L
Sbjct: 89 TLPHPRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSLCAILTVYLDNDLID 148
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
++ VF P G+ P +Y+ V+KAFC+ D SA +L +M+ P+ S+ L
Sbjct: 149 QLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQKDMESARKLLHKME----NPDIGSYNVL 204
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ + + + +++L+ ++ G++ + YN RI CK ++ AK LLDEM++KG+
Sbjct: 205 LEAYSENGDGVEFDEILKEIKNKGLEHDCTTYNHRILRFCKNKESVRAKKLLDEMVAKGV 264
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KPNS +Y+ I+GFCK G+FE A+K R++++ ++P S Y T+ M K G++++AL
Sbjct: 265 KPNSASYNMIIHGFCKVGDFESAQKVLGRMLADGYVAPCSISYITLFQHMVKEGEFDSAL 324
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
CKE I + WVP F M LV GL SKV AKE++ +K++ N D+W EA L
Sbjct: 325 NMCKEIIRRKWVPPFEAMDGLVKGLVEISKVEAAKEVVEKMKKRLKGNAADSWKTHEAAL 384
Query: 401 P 401
P
Sbjct: 385 P 385
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 171/313 (54%), Gaps = 5/313 (1%)
Query: 71 SHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
S LDR + + +L+ A F I + LEE K D+ E F I LYG++ M
Sbjct: 58 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGM 117
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+HA + F EM + K SV +FNALL A +K + ++ F E P G+ PD+ +YN
Sbjct: 118 FDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYN 177
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ AFCE SA S+L EM++ ++P+ +F L+ FY+ Y D K+ +M++
Sbjct: 178 IIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKN 237
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ V YN ++ + + +EA L+DEM + G+KP+ T + + GFC GN EEA
Sbjct: 238 NVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEA 297
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K++Y ++ + L P + Y T++ F+ + GD++ A CKE ++ W+ ++ ++ G
Sbjct: 298 KRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEG 357
Query: 366 LAGASKVSEAKEL 378
L SK+ EA EL
Sbjct: 358 LVKESKIEEATEL 370
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 119 LYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+Y + N+ + V+ FK+ E + R G + + L AK ++ ++ + E K I
Sbjct: 41 IYRERNL-KRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDI 99
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+ R+I + +S A+ + EM + + + SF AL+ +K++ ++
Sbjct: 100 SRE-GFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDG 158
Query: 238 VLQMME-RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
Q + G+ V YN+ +++ C++ A ++LDEM G++P+ +T++ + F
Sbjct: 159 FFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAF 218
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
++G++ + +K + +M + ++PN Y
Sbjct: 219 YQNGSYADGEKIWDLMKKNNVAPNVRSY-------------------------------- 246
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ + G+ +++SEA ELI +K K +V T N + G
Sbjct: 247 ---NAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGF 288
>gi|156070795|gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 200/356 (56%), Gaps = 7/356 (1%)
Query: 49 LKSESNPEKILEICRAAA---LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
LK+E +P+K LEI + + ++P S R A + +L++++ F+ I +LE K P
Sbjct: 40 LKAEHDPDKALEIYSSVSDRYVSPLS--SRYAQEFTVKRLAKSHRFSDIENFLESHKNSP 97
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ E F + I YG A M +HA++ + +MD+ S +FN LL A +K Y V
Sbjct: 98 KITQEPFLSSIIRSYGVAGMFDHALKIYHQMDDLGTPRSAISFNVLLSACVRSKLYDRVP 157
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E P YG PD +Y +I+++CE A L EM+ K ++ + +F ++
Sbjct: 158 QLFDEIPVKYGFLPDKVSYGILIRSYCEMGSPEMAMERLKEMEEKGVEITSVTFTTILHS 217
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
FYK+ K ++ KV M G V YNV+I ++ + KAL++EM G+KP+
Sbjct: 218 FYKKRKSDEAEKVWNEMVNRGCGPDVGAYNVKIMNI-QGGDPEGVKALIEEMNDAGLKPD 276
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+++Y++ + +C++ +EA+K Y + +G +PN++ + T+++++CK G +ET K
Sbjct: 277 TISYNYLMTCYCRNELIDEAQKVYDDLEKNGCNPNAATFRTLIFYLCKKGRFETGYKVFK 336
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
ES+ +P+F T+K LV GLA SK+ +AK + VK+KF N + W +IE L
Sbjct: 337 ESVKVQKIPDFDTLKYLVEGLAKKSKLKDAKGMCRTVKKKFPPNLIKAWTKIEEEL 392
>gi|357148282|ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 188/345 (54%)
Query: 38 SKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY 97
S D L +K E +P+++ E+ RA A +R AF A+ +LS A + + +
Sbjct: 78 STDSETPLLVRIKHERDPKRLYELFRANAHNRLLVENRFAFQDAVARLSGARRNDLVEEI 137
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
LE+ K P + E F I LYG+A M EHA+RTF+EM+ + + +FNA L L
Sbjct: 138 LEQHKALPQGRREGFVVRIIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLMQ 197
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A+ + E ++F E P YG++ D +YN V+K C+ + +AY ++ EM+++ I+P+
Sbjct: 198 AQLFDEALQLFEEGPGKYGVELDDISYNTVVKMMCDMGELRAAYRVMQEMEKEGIQPDVI 257
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+A FYK + E + + +M G ++ YNVRI L R+ +A L+ +M
Sbjct: 258 TYTTLMAAFYKNGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLINRRRGWQANDLVRKM 317
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G++P+ +TY+ I GF E AK + M G PN +Y TMV+++C+ ++
Sbjct: 318 YAAGIRPDEITYNLVIKGFFMMREHEMAKTVFGAMHGRGCKPNGKIYQTMVHYLCERREF 377
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ A CK+S+ W P+ T+ L+ GL SK A E++ LV
Sbjct: 378 DLAFRLCKDSMENNWFPSVDTIHHLLKGLMSISKDRNAGEIMKLV 422
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 184/337 (54%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
L +K E +PE++ ++ R A +R AF A+ +L+ A + + + LE+ K P
Sbjct: 103 LVKIKHERDPERLYQLFRTNAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKALP 162
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ E F I LYG+A M HA+RTF+EM + + + NA + L A+ + E
Sbjct: 163 QGRREGFVVRIIGLYGKAGMPSHALRTFQEMGMYGCPRTAKSLNATMKVLLRAQMFDEAL 222
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+F E P+ YG++ D + N V+K +C+ D +AY ++ M+ ++P+ ++ L+A
Sbjct: 223 WLFEEGPEKYGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTLMAA 282
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
FYK + E + + +M G + ++ YNVRI L + +A L+ +M + G+KP+
Sbjct: 283 FYKCGQREVGDGLWNLMRLRGCEPTLATYNVRIQFLINRERGWQANELVRKMYAVGIKPD 342
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I GF G E AK + M G PNS VY TMV+++C+ D++ A FCK
Sbjct: 343 EITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRFCK 402
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+S+ K W P+ T+ L+ GL SK A+E++ LV
Sbjct: 403 DSMEKNWFPSVNTINQLLKGLMAISKDRNAREIMKLV 439
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 194/367 (52%), Gaps = 5/367 (1%)
Query: 19 HRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAF 78
H A S+++ + ++ PL AL LK+E +PEK+ + +A A +R AF
Sbjct: 21 HSPAAVSNLIQNQNQKPLEE-----PALLKLKAERDPEKLFNLFKANAENKLVVENRFAF 75
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+++L+ AN F+ I LE KT P + E + I+LYG+A M EHA+ TF M
Sbjct: 76 EDTVSRLAGANRFDYIEHLLEHQKTLPQGRREGYMVRIIMLYGKAGMIEHAIDTFHNMHL 135
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+ +V +FNA L LT +D ++ E PK + I+ D+ + N ++KA CE
Sbjct: 136 RGCKRTVKSFNAALKVLTGTRDLATIETFVNEAPKKFDIEFDIFSVNIIVKALCERGVLD 195
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+Y ++ EM++ + P+ ++ L + +YK K E N + +M G ++ +NVRI
Sbjct: 196 KSYLLMVEMEKSGVTPDVITYTTLTSAYYKNNKAEIGNGLWNLMVLKGCLPNLATFNVRI 255
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
L +R+ A ++ M G+ P+ V+Y+ + GF + GN E AK Y + G
Sbjct: 256 QYLVNIRRAWHANDVMRLMQKIGIVPDEVSYNLVLKGFFQVGNLEMAKLVYFSLRCKGHK 315
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
N VY TMV+++CKGG+++ A C++ + W N T+ +L+ GL ++++AK +
Sbjct: 316 FNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRTNWFLNVDTIHTLLEGLKKNGQLNKAKVI 375
Query: 379 IGLVKEK 385
+ L + +
Sbjct: 376 LTLAQRR 382
>gi|293334061|ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 184/344 (53%)
Query: 39 KDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
+++ + L +K E +PE++ ++ RA A +R AF A+ +L+ A + + + L
Sbjct: 90 EEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEIL 149
Query: 99 EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
E+ K P + E F I LYG+A M HA+RTF+EM + + + NA + L A
Sbjct: 150 EQHKALPQGRREGFVVRIIGLYGKAGMPGHALRTFQEMGMYGCPRTAKSLNATMKVLLRA 209
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + E +F E P+ Y ++ D + N V+K FC+ D +AY ++ M+R ++P+ +
Sbjct: 210 RMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYQVMQGMERAGVRPDVIT 269
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ L+A FYK + E + + +M G ++ YNVRI L + +A L +M
Sbjct: 270 YTTLMAAFYKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANELARKMY 329
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+KP+ +TY+ I GF G E AK + M G PNS VY TMV+++C+ D++
Sbjct: 330 VAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFD 389
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
A CK+S+ K W P+ T+ L+ GL SK KE++ LV
Sbjct: 390 LAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLV 433
>gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 180/341 (52%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LKSE +PEK+ + +A A +R AF +++L+ A + I LE KT
Sbjct: 41 ALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTL 100
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A MT+ A+ TF MD + + SV +FNA L L+ D +
Sbjct: 101 PQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTI 160
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ P YGI D ++N IK+FCE AY + EM++ + P+ ++ L++
Sbjct: 161 WEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS 220
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
YK E+ N + +M G K ++ +NVRI L R+ +A LL M ++P
Sbjct: 221 ALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+S+TY+ I GF + A++ Y M G PN +Y TM++++CK G+++ A C
Sbjct: 281 DSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMC 340
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K+ + K W PN T++ L+ GL ++ +AK ++ LV +
Sbjct: 341 KDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 99/269 (36%), Gaps = 36/269 (13%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT 103
AAL +L + I E A +D ++F+IAI E +G + E++
Sbjct: 146 AALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREME- 204
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
++ +T V T+ + +H L L + K
Sbjct: 205 ------------------KSGLTPDVV-TYTTLISALYKHERCVIGNGLWNLMVLK---- 241
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
G KP+L T+N I+ + A +L M + ++P++ ++ ++
Sbjct: 242 ------------GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF+ + +V M G K + +Y IH LCK A + + + K
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
PN T + G K G ++AK ++
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIMELV 378
>gi|15220068|ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 180/341 (52%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LKSE +PEK+ + +A A +R AF +++L+ A + I LE KT
Sbjct: 41 ALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTL 100
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A MT+ A+ TF MD + + SV +FNA L L+ D +
Sbjct: 101 PQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTI 160
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ P YGI D ++N IK+FCE AY + EM++ + P+ ++ L++
Sbjct: 161 WEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS 220
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
YK E+ N + +M G K ++ +NVRI L R+ +A LL M ++P
Sbjct: 221 ALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+S+TY+ I GF + A++ Y M G PN +Y TM++++CK G+++ A C
Sbjct: 281 DSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMC 340
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K+ + K W PN T++ L+ GL ++ +AK ++ LV +
Sbjct: 341 KDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 36/263 (13%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT 103
AAL +L + I E A +D ++F+IAI E +G + E++
Sbjct: 146 AALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREME- 204
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
++ +T V T+ + +H L L + K
Sbjct: 205 ------------------KSGLTPDVV-TYTTLISALYKHERCVIGNGLWNLMVLK---- 241
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
G KP+L T+N I+ + A +L M + ++P++ ++ ++
Sbjct: 242 ------------GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF+ + +V M G K + +Y IH LCK A + + + K
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 284 PNSVTYSHFIYGFCKDGNFEEAK 306
PN T + G K G ++AK
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAK 372
>gi|26453140|dbj|BAC43646.1| unknown protein [Arabidopsis thaliana]
gi|28950987|gb|AAO63417.1| At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 180/341 (52%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LKSE +PEK+ + +A A +R AF +++L+ A + I LE KT
Sbjct: 41 ALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTL 100
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A MT+ A+ TF MD + + SV +FNA L L+ D +
Sbjct: 101 PQGRREGFMVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTI 160
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ P YGI D ++N IK+FCE AY + EM++ + P+ ++ L++
Sbjct: 161 WEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS 220
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
YK E+ N + ++ G K ++ +NVRI L R+ +A LL M ++P
Sbjct: 221 ALYKHERCVIGNGLWNLIVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+S+TY+ I GF + A++ Y M G PN +Y TM++++CK G+++ A C
Sbjct: 281 DSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMC 340
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K+ + K W PN T++ L+ GL ++ +AK ++ LV +
Sbjct: 341 KDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 36/263 (13%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT 103
AAL +L + I E A +D ++F+IAI E +G + E++
Sbjct: 146 AALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREME- 204
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
++ +T V T+ + +H L L + K
Sbjct: 205 ------------------KSGLTPDVV-TYTTLISALYKHERCVIGNGLWNLIVLK---- 241
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
G KP+L T+N I+ + A +L M + ++P++ ++ ++
Sbjct: 242 ------------GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF+ + +V M G K + +Y IH LCK A + + + K
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 284 PNSVTYSHFIYGFCKDGNFEEAK 306
PN T + G K G ++AK
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAK 372
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 189/355 (53%), Gaps = 4/355 (1%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSI---AINKLSEANY 90
+PL + KT A T+ +S SN + E+ + +S R + A+ L++A
Sbjct: 14 SPLPATTKTPAK-TIKRSSSNNSSLKEMVDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKK 72
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
F+ I LE K ++ E F + LYG+A M EHA + F E+ + +V +FNA
Sbjct: 73 FSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPKLNCERTVVSFNA 132
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL +K + ++ F E P G+ PD+ +YN ++ AFCE SA S+L EM++
Sbjct: 133 LLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKV 192
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++P+ +F L+ FY+ Y D K+ +M++ + V YN ++ + + +EA
Sbjct: 193 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEA 252
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
L+DEM + G+KP+ T + + GFC GN EEAK++Y ++ + L P + Y T++ F
Sbjct: 253 VELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPF 312
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + GD++ A CKE ++ W+ ++ ++ GL SK+ EA EL+ L K K
Sbjct: 313 LVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 367
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 202/360 (56%), Gaps = 7/360 (1%)
Query: 45 ALTLLKSESNPEKILEICRAAA---LTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
A + LK+E +P+K LEI + + ++P S R A + +L++++ F+ I +LE
Sbjct: 34 AKSKLKAEHDPDKALEIYSSVSDRYISPLS--SRYAQEYIVKRLAKSHRFSDIENFLESH 91
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
K P + E F + I YG A M +HA++ + +MD+ S +FN LL A +K Y
Sbjct: 92 KNSPKITQEPFLSSIIRSYGVARMFDHALKIYHQMDDLGTPRSAISFNVLLSACMHSKLY 151
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
V ++F E P YG PD +Y +I+++CE A EM+ K ++ A +F
Sbjct: 152 DRVAQLFDEIPVKYGFLPDKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTT 211
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ FYK+ K ++ +V M G V YNV+I ++ + K KAL++EM + G
Sbjct: 212 ILHSFYKKGKSDEAERVWNEMVSRGCGPDVGAYNVKIMNI-QGSKPEGVKALIEEMSNAG 270
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+KP++++Y++ + +CK+ +EA+K Y + +G +PN++ + T+++++CK G +ET
Sbjct: 271 LKPDTISYNYLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGRFETGY 330
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
+ES++ +P+F T+K LV GL S+ +AK + VK+KF N V W ++E L
Sbjct: 331 KVFRESVSVHKIPDFITLKYLVEGLVKKSRWRDAKGMSRTVKKKFPPNLVKAWIKLEEDL 390
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 198/356 (55%), Gaps = 7/356 (1%)
Query: 49 LKSESNPEKILEICRAAA---LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
LK+E +P+K+LEI + + ++P S R A + +L++++ F+ I +LE K
Sbjct: 38 LKAEHDPDKVLEIYSSVSDRYISPLS--SRYAQEYTVKRLAKSHRFSDIESFLESHKNSS 95
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ E F + I YG A M +HA++ + +MD+ S +FN LL A K Y V+
Sbjct: 96 KITQEPFLSSIIRSYGIAGMFDHALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDRVR 155
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E P YG PD +Y +I+++CE A L EM+ K ++ A +F L+
Sbjct: 156 QLFDEMPVKYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHA 215
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
FYK+ ++ KV M G V YNV+I ++ + KAL++EM + G+KP+
Sbjct: 216 FYKKGMGDEAEKVWNEMVNKGCGPDVGAYNVKIRNI-QGGDPEGVKALIEEMNNAGLKPD 274
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+++Y++ + +C++G +EA+K Y + +G +PN++ + +++ ++CK G +ET K
Sbjct: 275 TISYNYLMTCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVFK 334
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
ES+ +P+F T+K LV GL K+ +AK + VK+KF N V W ++E L
Sbjct: 335 ESVRVNKMPDFNTLKCLVEGLVKREKLKDAKGMSRTVKKKFPPNLVKAWAKLEEEL 390
>gi|317106734|dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 193/372 (51%), Gaps = 6/372 (1%)
Query: 20 RYLATSSILSSGDKTPLTS------KDKTRAALTLLKSESNPEKILEICRAAALTPESHL 73
R+ +++ ++S D + S + AL LK+E +PEK+ + +A A
Sbjct: 9 RFCHSAAAIASTDSPAVVSNYSLNNRPLEEPALIKLKAERDPEKLFNLFKANAQNRLVIE 68
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+R AF +++L+ A F+ I LE KT P + E F I+LY +A M +HA+ TF
Sbjct: 69 NRFAFEDTVSRLAGARRFHYIENLLEHQKTLPQGRREGFIVRIIMLYAKAGMVKHALNTF 128
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + + +V +FNA L LT ++ ++ E P+ + I D+ + N +IKA CE
Sbjct: 129 YDMHLYGCKRTVKSFNAALKVLTGTRNMVAIQDFLCEAPEKFDITMDIFSINIIIKALCE 188
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
AY ++ + + I+ + ++ L++ Y+ + + N + +M G K ++
Sbjct: 189 MGYLDKAYLVMVQFQKSGIEADVITYTTLISASYRNKLWMIGNGLWNLMVLKGCKPNLAT 248
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NVRI L R+ EA ++ M G+ P+ VTY+ I GFC G E AK+ Y +
Sbjct: 249 FNVRIQYLVNSRQSWEANDVMRLMQRIGIAPDQVTYNLVIKGFCLAGYLEMAKRVYSALQ 308
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PN +Y TM++++CKGG+++ A CK+ + KGW + T+ +L+ GL +
Sbjct: 309 GEVYKPNFKIYQTMIHYLCKGGEFDLAYTMCKDCMGKGWYLHVDTIHALLNGLMKNGHLG 368
Query: 374 EAKELIGLVKEK 385
+AK ++ L K K
Sbjct: 369 KAKLIVTLAKRK 380
>gi|115477108|ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 443
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 187/337 (55%), Gaps = 1/337 (0%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
L +K+E +P ++ E+ RA A +R AF A+ +L+ A + + + LE+ K P
Sbjct: 82 LVRIKNERDPVRLYELFRANAHNRLLIENRFAFEDAVARLAGARRNDLVEEILEQHKALP 141
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ E F I LYG+A M +HA+ TF+EM + + + NA + L A+ + EV
Sbjct: 142 QGRREGFVVRIIGLYGKARMPDHALSTFREMGLYGCPRTAKSLNATMKVLLRARLFDEVL 201
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E +TYG++ D +YN V+K C+ + +A+ ++ EM++ ++P+ ++ L+
Sbjct: 202 QLF-ESSETYGVELDDISYNTVVKMMCDLGELRAAFRVMQEMEKAGVRPDVITYTTLMDA 260
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
FYK + E + + +M G ++ YNVRI L R+ +A L+ +M + G++P+
Sbjct: 261 FYKCGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLVNRRRGWQANDLVRKMYASGLRPD 320
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I GF G E AK + M G PN+ VY TMV+++C+ +++ A CK
Sbjct: 321 EITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCKPNAKVYQTMVHYLCERREFDLAFRLCK 380
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+S+ K W P+ T+ L+ GL SK A+E++ LV
Sbjct: 381 DSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLV 417
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 167/305 (54%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
A+ L++A F+ I LE K ++ E F + LYG+A M EHA + F E +
Sbjct: 24 AVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXPKLN 83
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+V +FNALL +K + ++ F E P G+ PD+ +YN ++ AFCE SA
Sbjct: 84 CERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSA 143
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
S+L EM++ ++P+ +F L+ FY+ Y D K+ +M++ + V YN ++
Sbjct: 144 LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRG 203
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ + +EA L+DEM + G+KP+ T + + GFC GN EEAK++Y ++ + L P
Sbjct: 204 VISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPV 263
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ Y T++ F+ + GD++ A CKE ++ W+ ++ ++ GL SK+ EA EL+
Sbjct: 264 RATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVE 323
Query: 381 LVKEK 385
L K K
Sbjct: 324 LAKLK 328
>gi|125603901|gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 187/337 (55%), Gaps = 1/337 (0%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
L +K+E +P ++ E+ RA A +R AF A+ +L+ A + + + LE+ K P
Sbjct: 154 LVRIKNERDPVRLYELFRANAHNRLLIENRFAFEDAVARLAGARRNDLVEEILEQHKALP 213
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ E F I LYG+A M +HA+ TF+EM + + + NA + L A+ + EV
Sbjct: 214 QGRREGFVVRIIGLYGKARMPDHALSTFREMGLYGCPRTAKSLNATMKVLLRARLFDEVL 273
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E +TYG++ D +YN V+K C+ + +A+ ++ EM++ ++P+ ++ L+
Sbjct: 274 QLF-ESSETYGVELDDISYNTVVKMMCDLGELRAAFRVMQEMEKAGVRPDVITYTTLMDA 332
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
FYK + E + + +M G ++ YNVRI L R+ +A L+ +M + G++P+
Sbjct: 333 FYKCGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLVNRRRGWQANDLVRKMYASGLRPD 392
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I GF G E AK + M G PN+ VY TMV+++C+ +++ A CK
Sbjct: 393 EITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCKPNAKVYQTMVHYLCERREFDLAFRLCK 452
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+S+ K W P+ T+ L+ GL SK A+E++ LV
Sbjct: 453 DSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLV 489
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 167/302 (55%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+ +L+ A F + LE K D+ NE F A I LYG++ MT+HA + F EM +
Sbjct: 63 VRRLAGARRFRWVRDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNC 122
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+V + NALL A + Y V+ +F + P IKPDL TYN +IKAFCE SA
Sbjct: 123 SRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSAL 182
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+L E++ K + P++ +F L+ G Y + ++E+ KV + M + GV Y ++ L
Sbjct: 183 SVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCSKLVGL 242
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+++K EA L EM G+KP+ + I GF +GN +EAKK++ ++ S P+
Sbjct: 243 AEVKKAGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKSEYDPDK 302
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+ Y +V F+C+ GD++TA+ CKE + T ++ +V LA ++EAKE++ +
Sbjct: 303 NTYSIIVPFLCEKGDFKTAIEMCKEIFNNRCRVDATLLQGVVDKLASEGMITEAKEIVEI 362
Query: 382 VK 383
K
Sbjct: 363 GK 364
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/176 (18%), Positives = 73/176 (41%), Gaps = 5/176 (2%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
L+P+S + F+ ++ L F + E++ R + ++ +
Sbjct: 192 GLSPDS----ITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCSKLVGLAEVKK 247
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
AV F+EM++ ++ + NA++ + E K+ F E K+ PD +TY+
Sbjct: 248 AGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKS-EYDPDKNTYS 306
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
++ CE D +A + E+ + +A+ +V E + +++++
Sbjct: 307 IIVPFLCEKGDFKTAIEMCKEIFNNRCRVDATLLQGVVDKLASEGMITEAKEIVEI 362
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 188/355 (52%), Gaps = 4/355 (1%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSI---AINKLSEANY 90
+PL + KT A T+ +S SN + E+ + +S R + A+ L++A
Sbjct: 14 SPLPATTKTPAK-TIKRSSSNNSTLKEMIDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKK 72
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
+ I LE + ++ E F + LYG A M +HA + F E+ + +V +FNA
Sbjct: 73 LSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPKLNCERTVMSFNA 132
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL A +K + ++ F E P GI PD+ +YN ++ AFCE SA S+L EM++
Sbjct: 133 LLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKV 192
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++P+ +F L+ FY+ Y D K+ +M++ + V YN ++ + + +EA
Sbjct: 193 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEA 252
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
L+DEM + G+KP+ T + + GFC GN EEAK++Y ++ + L P + Y T++ F
Sbjct: 253 VELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPF 312
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + GD+E A CKE ++ W+ ++ ++ GL SK+ EA EL+ L K K
Sbjct: 313 LVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELEKLK 367
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 204/371 (54%), Gaps = 8/371 (2%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEI---CRAAALTPESHLDRLAFSIAINKLSEANYF 91
P + K A + L+ E +P+K L+I + +P S R A + + +L++ F
Sbjct: 42 PSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVS--SRYAQELTVRRLAKCRRF 99
Query: 92 NGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+ I +E K P ++ E F++ I YGQA+M HA+RTF++MD++ S +FNAL
Sbjct: 100 SDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNAL 159
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L A +K++ +V ++F E P+ Y I PD +Y +IK++C+S A I+ +M K
Sbjct: 160 LNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGK 219
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++ +F +++ YK+ + E + + M + G + + YNVRI S K
Sbjct: 220 GMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERV 278
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
K L++EM S G+KP++++Y++ + +C+ G +EAKK Y + + +PN++ + T+++
Sbjct: 279 KELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFH 338
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN- 389
+C YE K+S+ +P+F T+K LV GL K +AK LI VK+KF +
Sbjct: 339 LCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSF 398
Query: 390 VDTWNEIEAGL 400
++ W ++E L
Sbjct: 399 LNAWKKLEEEL 409
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 203/369 (55%), Gaps = 4/369 (1%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNG 93
P + K A + L+ E +P+K L+I + S + R A + + +L++ F+
Sbjct: 26 PSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSD 85
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I +E K P ++ E F++ I YGQA+M HA+RTF++MD++ S +FNALL
Sbjct: 86 IETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLN 145
Query: 154 ALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A +K++ +V ++F E P+ Y I PD +Y +IK++C+S A I+ +M K +
Sbjct: 146 ACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGM 205
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ +F +++ YK+ + E + + M + G + + YNVRI S K K
Sbjct: 206 EVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKE 264
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L++EM S G+KP++++Y++ + +C+ G +EAKK Y + + +PN++ + T+++ +C
Sbjct: 265 LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VD 391
YE K+S+ +P+F T+K LV GL K +AK LI VK+KF + ++
Sbjct: 325 YSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLN 384
Query: 392 TWNEIEAGL 400
W ++E L
Sbjct: 385 AWKKLEEEL 393
>gi|255555097|ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542431|gb|EEF43973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 188/351 (53%), Gaps = 3/351 (0%)
Query: 34 TPLTSKDKTRAA-LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFN 92
T LT+ RA+ + +L E N ++++E + + + I +L+ A FN
Sbjct: 16 TQLTTGTAARASSVKVLYKERNLKRLVEKFKKFSENDRFRTKTGIYEETIRRLAIAKRFN 75
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
I + LE+ K D+ E ++A I LYG++NM +++ + F EM + + +V +FNALL
Sbjct: 76 WIEEILEDQKKYKDIHKEGYNARLIRLYGKSNMFDNSRKVFDEMPDRNCKRTVVSFNALL 135
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A +K + EV +F + PK IKPD +YN VIK +CE A S+L EM+ K
Sbjct: 136 AACVTSKKFDEVDGLFRKLPKELEIKPDTVSYNTVIKGYCEMGALDKAISLLVEMEMKGN 195
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P+ +F L+ GFY + D ++ M + + + YN ++ L +++ +A
Sbjct: 196 PPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPDIRSYNAKLLGLALVKRTKDAVL 255
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG--LSPNSSVYFTMVYF 330
LL EM SKG+KP+ ++++ I GF K+ N EEAK +Y NSG P+ + T++ F
Sbjct: 256 LLQEMKSKGIKPDVISFNALIKGFVKEENLEEAKYWYCETRNSGGDCGPDKFTFTTLIPF 315
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+C+ GD A K+ I++ + + +K +V GL SK+ +A EL+ L
Sbjct: 316 VCEKGDLRFAFELSKDVISRKCLVDMALLKCVVEGLVKESKIQDANELVKL 366
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 123/286 (43%), Gaps = 40/286 (13%)
Query: 118 ILYGQANMTEHAVRTFKEMDEH-KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+LY + N+ + V FK+ E+ + R G + + L IAK + ++ + + K
Sbjct: 31 VLYKERNL-KRLVEKFKKFSENDRFRTKTGIYEETIRRLAIAKRFNWIEEILEDQKKYKD 89
Query: 177 IKPDLDTYN-RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
I + YN R+I+ + +S+ ++ + EM ++ K SF AL+A +K+++V
Sbjct: 90 IHKE--GYNARLIRLYGKSNMFDNSRKVFDEMPDRNCKRTVVSFNALLAACVTSKKFDEV 147
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + + KL K E +KP++V+Y+ I G
Sbjct: 148 DGLFR----------------------KLPKELE------------IKPDTVSYNTVIKG 173
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C+ G ++A M G P+ + T++ G + + + K VP+
Sbjct: 174 YCEMGALDKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPD 233
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ + + GLA + +A L+ +K K K +V ++N + G
Sbjct: 234 IRSYNAKLLGLALVKRTKDAVLLLQEMKSKGIKPDVISFNALIKGF 279
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 202/369 (54%), Gaps = 4/369 (1%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNG 93
P + K A + L+ E +P+K L+I + S + R A + + +L++ F+
Sbjct: 26 PSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSD 85
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I +E K P ++ E F++ I YG+A+M +HA+RTF++MD++ S +FNALL
Sbjct: 86 IETLIESHKNDPKIKEEPFYSTLIRSYGRASMFDHAMRTFEQMDQYGTPRSAVSFNALLN 145
Query: 154 ALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A +K + +V ++F E P+ Y I PD +Y +IK++C+S A I+ +M K +
Sbjct: 146 ACLHSKKFDKVPQLFDEIPQRYNKIVPDKISYGILIKSYCDSGSPQKAIEIMRQMQGKGM 205
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ +F +++ YK+ + E + M + G + + YNVRI S K K
Sbjct: 206 EVTTIAFTTILSSLYKKGELEVAESLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKE 264
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L++EM + G+KP++++Y++ + +C+ G +EAKK Y + + +PNS+ + T+++ +C
Sbjct: 265 LIEEMSTMGLKPDTISYNYLMTAYCEKGMLDEAKKVYEGLEGNNCAPNSATFRTLIFHLC 324
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VD 391
YE K+S+ +P+F T+K L GL K+ +AK LI VK+KF + ++
Sbjct: 325 YSRLYEQGYAIFKKSVYMHKIPDFNTLKHLAVGLVEKKKIDDAKGLIRTVKKKFPPSFMN 384
Query: 392 TWNEIEAGL 400
W ++E L
Sbjct: 385 AWKKLEEEL 393
>gi|224094727|ref|XP_002310210.1| predicted protein [Populus trichocarpa]
gi|222853113|gb|EEE90660.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 206/387 (53%), Gaps = 15/387 (3%)
Query: 17 KHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESH--LD 74
+H R+L+T+ T K A + L++E +P+K L I +A+ S +
Sbjct: 6 RHLRHLSTT-----------TQKISITKAKSRLRTEHDPDKALAIFSSASSNDSSPPVVS 54
Query: 75 RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
R A + + +L++++ F I +E K+ P ++ E F + I YG A M + A++T++
Sbjct: 55 RYAQDLTVRRLAKSHRFADIESLMESHKSDPKIKQEPFLSSLIRSYGVAGMFDQALKTYQ 114
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EMD+ S +FNALL A +K YK+V +F E + Y + PD +Y ++KA+CE
Sbjct: 115 EMDQLGTPRSCISFNALLSACIQSKLYKKVPVLFNEISEKYRVLPDTVSYGMLVKAYCED 174
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A +L EM++K ++ A ++ Y + K ++ + L M G + +Y
Sbjct: 175 GKPEKAIEVLGEMEKKGVEVTAIVCTPVLNCLYSKGKKDEAERFLDGMVERGCELDAVVY 234
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
NV+I + + K L++EM S G+KP++++Y++ + +C G EEAKK Y
Sbjct: 235 NVKISNAVS-QGPERVKELIEEMESYGLKPDTISYNYLMTSYCTSGMMEEAKKVYEEFRV 293
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G N++ + T+V+ +CK G+YE K+S+ +P+F T+K LV GL K+ E
Sbjct: 294 HGCKANAATFRTLVFNLCKSGEYEKGYEIFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKE 353
Query: 375 AKELIGLVKEKFTKN-VDTWNEIEAGL 400
AK LI +K+KF N ++ W ++E L
Sbjct: 354 AKGLIRTMKKKFPLNLLNAWKKVEENL 380
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 64 AAALTPESHLDRLA------------------FSIAINKLSEANYFNGISQYLEELKTRP 105
A LT E HL + F + L+ F+ I +E K
Sbjct: 45 ATPLTAEEHLQNIVDKFIKNTESQRFRHKKGTFDSTVRLLAVRKKFSLIEDIIEAQKKYE 104
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
D++ E F I LYG+A M HA + F E+ E +V +FN+LL + +K++ +V+
Sbjct: 105 DIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKEFDQVE 164
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E P+ IK D+ +YN VI AFCE A +M++ ++PN +F L+
Sbjct: 165 KIFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTA 224
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
Y++ ++ D +V ME + + YN R+ + ++ + LL +M K +KP+
Sbjct: 225 LYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPD 284
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+Y+ I GFC+DG+ EEAKK+Y + S + P ++ Y ++ +C+ GD+++ L CK
Sbjct: 285 VYSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCK 344
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E+I KG+V + ++ +V GLA SK+ EAK+L+ L K
Sbjct: 345 EAIDKGFVFHTAEVQRVVNGLAEVSKIEEAKDLVELYNSK 384
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 166/316 (52%), Gaps = 5/316 (1%)
Query: 71 SHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
S LDR + + +L+ A F I + LEE K D+ E F I LYG++ M
Sbjct: 50 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGM 109
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+HA + F EM + K SV +FNALL A +K + +V+ F E P ++PDL +YN
Sbjct: 110 FDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYN 169
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI C+ SA +L EM++KS++P+ +F L+ G Y ++ D K+ ME+
Sbjct: 170 IVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKK 229
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN ++ L ++ E L++EM +KG+KP+ +++ I GFC DG +EA
Sbjct: 230 NILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEA 289
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+Y M + P+ + T+V C+ G ++ A CKE + + + +++ V G
Sbjct: 290 TNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDG 349
Query: 366 LAGASKVSEAKELIGL 381
L KV EAK+L+ L
Sbjct: 350 LVKGGKVVEAKKLVQL 365
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 169/318 (53%), Gaps = 5/318 (1%)
Query: 71 SHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
S +DR + + +L+ A F I LE K D+ NE F A I LYG++ M
Sbjct: 49 SDIDRFRKKTGIYEDTVRRLAGARRFRWIRDILEHQKQYSDISNEGFSARLISLYGKSGM 108
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+HA + F EM + +V + NALL A ++ Y V +F + P IKPDL TYN
Sbjct: 109 TKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSRKYDIVGELFRDLPTQLSIKPDLVTYN 168
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+IKAFCE SA S+ E++ K + P++ +F L+ G Y + ++E+ KV + M
Sbjct: 169 TIIKAFCEKGSFDSALSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMGVK 228
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ GV Y ++ L +++K EA L EM G+KP+ + I GF +GN +EA
Sbjct: 229 NVAPGVRSYCSKLVGLAEVKKMGEAVVLFREMEKLGVKPDLFCINAVIKGFVNEGNLDEA 288
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
KK++ ++ P+ + Y +V F+C+ GD++TA+ CKE + T ++ +V
Sbjct: 289 KKWFGEIAKFEYDPDRNTYSIIVPFLCEKGDFKTAIDMCKEIFNNRCRVDATLLQGVVDK 348
Query: 366 LAGASKVSEAKELIGLVK 383
LA +EAKE++ + K
Sbjct: 349 LASEGMDTEAKEIVEIGK 366
>gi|359496216|ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 168/317 (52%), Gaps = 6/317 (1%)
Query: 71 SHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
S LDR + + +L+ A F I + LEE K D+ E F I LYG++ M
Sbjct: 50 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGM 109
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+HA + F EM + K SV +FNALL A +K + +V+ F E P ++PDL +YN
Sbjct: 110 FDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYN 169
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VIK C+ SA +L EM++KS++P+ +F L+ G Y ++ D K+ ME+
Sbjct: 170 IVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKK 229
Query: 246 GMKSGVSMYNVRIHSLCKL-RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ + YN ++ L ++ E L++EM +KG+KP+ +++ I GFC DG +E
Sbjct: 230 NILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDE 289
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A +Y M + SP+ + T+V C+ G ++ A CKE + + + +++ V
Sbjct: 290 ATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVD 349
Query: 365 GLAGASKVSEAKELIGL 381
GL KV EAK+L+ L
Sbjct: 350 GLVKGGKVVEAKKLVQL 366
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 186/374 (49%), Gaps = 9/374 (2%)
Query: 6 RLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAA 65
R +T N F K A+S+ + G +K+ + LT EK C +
Sbjct: 30 RSQTKSNKFPSKLKASTASSASVGDGGNLSNDAKESKNSKLT-----KKVEKFKRSCESE 84
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
L +S I +L EA F+ I + L+ K D+++E F ++LYG + M
Sbjct: 85 GFRQVHGL----YSAFIRRLREAKKFSTIHEVLQYQKKFDDIKSEDFVIRIMLLYGYSGM 140
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
EHA + F EM E +V +FNALL A ++ E K+ F E P+ GI PDL TYN
Sbjct: 141 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYN 200
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+IKA C + SI E+++ +P+ SF L+ FY+ E + + +++ +M+
Sbjct: 201 TMIKALCRTGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 260
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN R+ L + +K +A L++ M ++G+ P+ TY+ FI + D N EE
Sbjct: 261 NLAPNIRSYNSRVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNLEEV 320
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+Y M GL+P++ Y ++ +CK GD + A+ +E+I + K +V
Sbjct: 321 MKWYNEMKEKGLTPDTVTYCLLIPLLCKKGDLDRAVEISEEAIKHKLLSRPNMYKPVVER 380
Query: 366 LAGASKVSEAKELI 379
L GA K+ EA +L+
Sbjct: 381 LMGAGKIDEATQLV 394
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 109/246 (44%), Gaps = 2/246 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
R G ++A + L AK + + V +++ K + D R++ + S + A
Sbjct: 86 FRQVHGLYSAFIRRLREAKKFSTIHEV-LQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHA 144
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVSMYNVRIH 259
+ + EM + + SF AL++ + K ++ K ++ E+ G+ + YN I
Sbjct: 145 HKLFDEMPELNCERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIK 204
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+LC+ + ++ +E+ G +P+ ++++ + F + F E + + +M + L+P
Sbjct: 205 ALCRTGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAP 264
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N Y + V + + + A+ +G P+ T + +T G + + E +
Sbjct: 265 NIRSYNSRVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNLEEVMKWY 324
Query: 380 GLVKEK 385
+KEK
Sbjct: 325 NEMKEK 330
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 64 AAALTPESHLDRLAFSIAINK------------------LSEANYFNGISQYLEELKTRP 105
A LT E+ L +L IN L+ F+ I + +E K
Sbjct: 45 ATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYD 104
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+++ E F I LYG+A M A + F E+ E K +V +FNALL++ +K++ +V+
Sbjct: 105 EIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVE 164
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E P+ I+ D+ +YN VI A+CE D A M++ ++P+ +F L+
Sbjct: 165 KIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTA 224
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
Y++ ++ D + ME + + YN R+ + ++ + LL +M K +KP+
Sbjct: 225 LYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPD 284
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
Y+ I FCKDG+ EEAKK+Y + S + PN++ Y T++ +C+ GD+++ L CK
Sbjct: 285 VHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCK 344
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E+I K +V + ++ +V GLA SK EAK+L+ L K
Sbjct: 345 EAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSK 384
>gi|147791424|emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
Length = 383
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 166/317 (52%), Gaps = 6/317 (1%)
Query: 71 SHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
S LDR + + +L+ A F I + LEE K D+ E F I LYG++ M
Sbjct: 50 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGM 109
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+HA + F EM + K SV +FN LL A +K + +V+ F E P ++PDL +YN
Sbjct: 110 FDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYN 169
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VIK C+ SA +L EM++KS++P+ +F L+ Y ++ D K+ ME+
Sbjct: 170 IVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKK 229
Query: 246 GMKSGVSMYNVRIHSLCKL-RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ + YN ++ L ++ E L++EM +KG+KP+ +++ I GFC DG +E
Sbjct: 230 NILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDE 289
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A +Y M + SP+ + T+V C+ G ++ A CKE + + + +++ V
Sbjct: 290 ATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVD 349
Query: 365 GLAGASKVSEAKELIGL 381
GL KV EAK+L+ L
Sbjct: 350 GLVKGGKVVEAKKLVQL 366
>gi|15222796|ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14 [Arabidopsis thaliana]
gi|18650654|gb|AAL75896.1| At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis thaliana]
gi|332195194|gb|AEE33315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 189/365 (51%)
Query: 19 HRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAF 78
R+ + ++++S ++ +L+ E NP++I+E + A + + +
Sbjct: 18 RRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVY 77
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+ +L A + + + LEE K D+ E F A I LYG+A M E+A + F+EM
Sbjct: 78 DRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPN 137
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+ SV +FNALL A ++K + V+ +F E P IKPD+ +YN +IKA CE
Sbjct: 138 RDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLP 197
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A ++L E++ K +KP+ +F L+ Y + ++E ++ M + + YN R+
Sbjct: 198 EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARL 257
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
L K E L E+ + G+KP+ +++ I G +G +EA+ +Y+ + G
Sbjct: 258 LGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYR 317
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ + + ++ MCK GD+E+A+ KE+ +K ++ TT++ LV L SK EA+E+
Sbjct: 318 PDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Query: 379 IGLVK 383
+ + K
Sbjct: 378 VKIAK 382
>gi|224114227|ref|XP_002316702.1| predicted protein [Populus trichocarpa]
gi|222859767|gb|EEE97314.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 189/341 (55%)
Query: 41 KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE 100
K ++ T + E N E ++E + A++ + + +I++L+ A FN + + LE+
Sbjct: 25 KAKSYWTEIIKERNLEHLVEKFKNASVDEDFRTKTFVYKNSIHRLAAARKFNYVEEILED 84
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
K D+ E F+A I LYG A M ++A + F EM E K +V +FNALL A +K
Sbjct: 85 QKQYEDIYKEGFNARLISLYGVAGMFDNARKVFDEMFERKCARTVVSFNALLGACVNSKK 144
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ E + +F K I+PDL +YN V+KAFCE SA ++L EM++K ++P+ +F
Sbjct: 145 FDEAEGLFKGLSKELEIEPDLVSYNTVLKAFCEMGSMDSAATLLDEMEKKGLEPDLITFN 204
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ GFY + ++ D ++ + M+ ++ + YN ++ L ++ + +++EM S+
Sbjct: 205 TLLHGFYAKGRFVDGERIWEQMKEKNVEPDIRSYNAKLLGLTLEKRMEDVVKVVEEMKSE 264
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++ ++ +YS I GF +G+ ++AK +Y + SG + ++ F + GD+ A
Sbjct: 265 GIQLDTFSYSTLIRGFVNEGDLKKAKHWYHEIGRSGCKRDKLTLEGLIPFALQKGDFMFA 324
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
G CK+ + + ++S+V LA S++ EAK+L+GL
Sbjct: 325 YGICKDVLCSKLLVQNALIQSVVDALAKDSRLEEAKKLVGL 365
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 161/288 (55%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
F+ I +E K D++ E F I LYG+A M HA + F E+ E +V +FN+
Sbjct: 1327 FSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNS 1386
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL + +K+ +V+++F E P+ IK D+ +YN VI AFCE A +M++
Sbjct: 1387 LLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKN 1446
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++PN +F L+ Y++ ++ D +V ME + + YN R+ + ++ +
Sbjct: 1447 GMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDG 1506
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
LL +M K +KP+ +Y+ I GFC+DG+ EEAKK+Y + S + P ++ Y ++
Sbjct: 1507 IELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPL 1566
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+C+ GD+++ L CKE+I KG+V + ++ +V GLA SK EAK+L
Sbjct: 1567 LCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVDGLAEVSKTEEAKDL 1614
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 175/334 (52%), Gaps = 18/334 (5%)
Query: 64 AAALTPESHLDRLAFSIAINK------------------LSEANYFNGISQYLEELKTRP 105
A LT E+ L +L IN L+ F+ I + +E K
Sbjct: 902 ATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYD 961
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+++ E F I LYG+A M A + F E+ E K +V +FNALL++ +K++ +V+
Sbjct: 962 EIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVE 1021
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E P+ I+ D+ +YN VI A+CE D A M++ ++P+ +F L+
Sbjct: 1022 KIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTA 1081
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
Y++ ++ D + ME + + YN R+ + ++ + LL +M K +KP+
Sbjct: 1082 LYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPD 1141
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
Y+ I FCKDG+ EEAKK+Y + S + PN++ Y T++ +C+ GD+++ L CK
Sbjct: 1142 VHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCK 1201
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E+I K +V + ++ +V GLA SK EAK+L+
Sbjct: 1202 EAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLL 1235
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 18/309 (5%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
F+ I +E K +++ E F I LYG+A M HA + F E+ E +V +FNA
Sbjct: 1726 FSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNA 1785
Query: 151 LL------------------LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
LL + +K++ +++ +F E P+ I+ D+ +YN VI A+C
Sbjct: 1786 LLTSCANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAYC 1845
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +M++ +PN +F L+ Y + ++ D + ME + +
Sbjct: 1846 KMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDLI 1905
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN R+ + ++ + LL EM K +KPN +Y I GFC+DG+ E+AK++Y +
Sbjct: 1906 SYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGDLEQAKQWYYKL 1965
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++ ++PN+S+Y T++ C+ GD+++ L CKES G V ++ +V GL SK+
Sbjct: 1966 KDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFLAEEVQRVVDGLIEVSKI 2025
Query: 373 SEAKELIGL 381
EAK+L+ L
Sbjct: 2026 EEAKDLVAL 2034
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 114 AHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++I++ + + + + A+ F +M+++ + ++ FN LL AL + + +RV+
Sbjct: 1419 SYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATM 1478
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ I PDL +YN ++ +LA+M+ K IKP+ S+ L+ GF ++
Sbjct: 1479 -ENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGD 1537
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E+ K ++ + + Y + + LC+ L E + KG ++
Sbjct: 1538 LEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQR 1597
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
+ G + EEAK R+ + L+ + F ++Y
Sbjct: 1598 VVDGLAEVSKTEEAKDLSRL---TALTEFQLLVFDLLY 1632
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 114 AHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++I++ Y + + + A+ F M+++ + + FN LL AL + + + ++
Sbjct: 1039 SYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARM 1098
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ I PDL +YN ++ +LA+M+ K IKP+ + L+ F K+
Sbjct: 1099 -ENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 1157
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E+ K ++ + + Y + LC+ L E ++K ++
Sbjct: 1158 LEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 1217
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ G + EEAK + M +S LS
Sbjct: 1218 VVDGLAEVSKTEEAKDLLKKMFSSSLS 1244
>gi|297834132|ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
gi|297330788|gb|EFH61207.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 191/377 (50%), Gaps = 6/377 (1%)
Query: 7 LRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAA 66
LR NL+L + + R+ + + ++ +P S +TL+ E +P+ I+E + A
Sbjct: 9 LRGNLSLSTPTNRRFFSAVTAAAATPSSPRPS------LITLVNDERDPKFIMEKFKKAC 62
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
+ + + +L+ A F + + LEE P++ E F A I LYG+ M
Sbjct: 63 QAEWFRKNIAVYEKTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 122
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E+A + F EM E + +V +FNALL A +K + V+ +F E P I+PD+ +YN
Sbjct: 123 ENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVESIFKELPGKISIEPDVASYNT 182
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK C + A +++ E++ K +KP+ +F L+ Y + K+E+ K+ M
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEKIWARMVEKK 242
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN R+ L +K E +L DE+ +KP+ T++ I GF +G +EA
Sbjct: 243 VKRDIRSYNARLLGLAMEKKSEEMVSLFDELKVNELKPDVFTFTAMIKGFAGEGRLDEAI 302
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+Y+ + +G P V+ +++ +CK D E+A CKE K + + ++ +V L
Sbjct: 303 TWYKEIEKNGCRPMKFVFNSLLPAICKACDLESAYELCKEIFVKRLLVDEAVLQEVVDTL 362
Query: 367 AGASKVSEAKELIGLVK 383
SK EA+E++ L K
Sbjct: 363 VKGSKQDEAEEIVELAK 379
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 159/302 (52%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S I +L EA F+ I + L+ K D+++E F ++LYG + M EHA + F EM
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E +V +FNALL A +K E + F E P+ GI PDL TYN +IKA C
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
SI E+++ +P+ SF L+ FY+ E + + +++ +M+ + + YN R
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L + +K +A L+D M ++G+ P+ TY+ I + D N EE K Y M GL
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P++ Y ++ +CK GD + A+ +E+I + K +V L GA K+ EA +
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQ 389
Query: 378 LI 379
L+
Sbjct: 390 LV 391
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ +T+ + + + R G ++A + L AK + + V +++ K + D
Sbjct: 65 SKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEV-LQYQKKFDDIKSED 123
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QM 241
R++ + S + A+ + EM + + SF AL++ + +K ++ K ++
Sbjct: 124 FVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL 183
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
E+ G+ + YN I +LC+ + ++ +E+ G +P+ ++++ + F +
Sbjct: 184 PEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRREL 243
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
F E + + +M + LSPN Y + V + + + AL +G P+ T +
Sbjct: 244 FVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNA 303
Query: 362 LVTGLAGASKVSEAKELIGLVKEK 385
L+T + + E + +KEK
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEK 327
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 184/342 (53%)
Query: 40 DKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLE 99
D ++ L+ E N +K+++ + A++ + I +LS + F+ + + LE
Sbjct: 29 DTAKSLSYLIYKERNHKKLVKKFKNASVNEHFRTKVAIYKETIRRLSVSRKFDYVEEILE 88
Query: 100 ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
+ K D+ E F+A I LYG M +HA + F EM E + +V +FNALL A +K
Sbjct: 89 DQKQYKDMSKEGFNARLISLYGSVGMFDHARKVFDEMRERQCARTVMSFNALLGACLSSK 148
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
++ EV+ +F K I+PDL +YN VIKAFCE SA S+L EM RK ++P+ +F
Sbjct: 149 NFDEVEGLFRGLSKEIKIEPDLISYNTVIKAFCEMGSLDSAVSLLDEMKRKGLEPDLITF 208
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ GFY + ++ D ++ + M+ ++ V YN ++ L ++ + +++EM S
Sbjct: 209 NTLLHGFYAKGRFVDGERIWEQMKEKNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMKS 268
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+G++ ++ +YS I GF +G+ + AK +Y + SG + ++ F + GD+
Sbjct: 269 EGIQLDTFSYSALIRGFVNEGDLKNAKHWYLEIGRSGCKRDKLTLEGLIPFALQKGDFMF 328
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
A G CK+ + + ++S+V LA S++ AKEL+ L
Sbjct: 329 AYGICKDVLCSKLLVQNALIQSVVDALAKESRMEAAKELVNL 370
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 165/314 (52%), Gaps = 5/314 (1%)
Query: 71 SHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
S +DR + + +L+ A F + +E K+ D+ NE F A I LYG++NM
Sbjct: 44 SDIDRFRKKNGIYEDTVRRLAGAKRFRWVRDIIEHQKSYADISNEGFSARLITLYGKSNM 103
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
HA + F EM + SV + NALL A +K Y V+R+F + P +KPDL +YN
Sbjct: 104 HRHAQKLFDEMPQRNCERSVLSLNALLAAYLHSKQYDVVERLFKKLPVQLSVKPDLVSYN 163
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
IKA E SA S+L EM++ ++ + +F L+ G Y + ++ED K+ + +
Sbjct: 164 TYIKALLEKGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWEKLGEK 223
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN R+ L ++ EA +EM KG+KP+ +++ I GF +GN +EA
Sbjct: 224 NVVPNIRTYNARLLGLAVAKRAGEAVEFYEEMEKKGVKPDLFSFNALIKGFANEGNLDEA 283
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
KK++ + S P+ Y +V F+C+ GD +TA+ K+ + + ++ +V
Sbjct: 284 KKWFGEIEKSEHDPSKRTYAIIVPFLCEKGDLKTAIEMVKQIFLTRCRVDVSLLRIVVGK 343
Query: 366 LAGASKVSEAKELI 379
L S VSEAKE++
Sbjct: 344 LVSESMVSEAKEIV 357
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 35/260 (13%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
LY + N+ + K D + R G + + L AK ++ V+ + IE K+Y
Sbjct: 27 LYKEQNLKTLVEKFKKASDIDRFRKKNGIYEDTVRRLAGAKRFRWVRDI-IEHQKSYADI 85
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
+ R+I + +S+ A + EM +++ + + S AL+A + ++Y+
Sbjct: 86 SNEGFSARLITLYGKSNMHRHAQKLFDEMPQRNCERSVLSLNALLAAYLHSKQYD----- 140
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
++ER K V + +KP+ V+Y+ +I +
Sbjct: 141 --VVERLFKKLPVQL---------------------------SVKPDLVSYNTYIKALLE 171
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+F+ A M G+ + + T++ + G +E ++ K VPN T
Sbjct: 172 KGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWEKLGEKNVVPNIRT 231
Query: 359 MKSLVTGLAGASKVSEAKEL 378
+ + GLA A + EA E
Sbjct: 232 YNARLLGLAVAKRAGEAVEF 251
>gi|21617993|gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 190/377 (50%), Gaps = 6/377 (1%)
Query: 7 LRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAA 66
LR N + + + R+ S +++ TP K + +TL+ E +P+ I E + A
Sbjct: 9 LRGNFSFSTPTNRRFF---SAVTAAAATPSPPKP---SLITLVNDERDPKFITEKFKKAC 62
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
+ + + +L+ A F + + LEE P++ E F A I LYG+ M
Sbjct: 63 QAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 122
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E+A + F EM E + +V +FNALL A +K + V+ +F E P I+PD+ +YN
Sbjct: 123 ENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVEGIFEELPGKLSIEPDVASYNT 182
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK C + A +++ E++ K +KP+ +F L+ Y + K+E+ ++ M
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN R+ L K E +L D++ +KP+ T++ I GF +G +EA
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+Y+ + +G P V+ +++ +CK GD E+A CKE AK + + ++ +V L
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Query: 367 AGASKVSEAKELIGLVK 383
SK EA+E++ L K
Sbjct: 363 VKGSKQDEAEEIVELAK 379
>gi|18399887|ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product [Arabidopsis thaliana]
gi|22531265|gb|AAM97136.1| expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein [Arabidopsis thaliana]
gi|332641782|gb|AEE75303.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 394
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 189/377 (50%), Gaps = 6/377 (1%)
Query: 7 LRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAA 66
LR N + + + R+ S +++ TP K + +TL+ E +P+ I E + A
Sbjct: 9 LRGNFSFSTHTNRRFF---SAVTAAAATPSPPKP---SLITLVNDERDPKFITEKFKKAC 62
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
+ + + +L+ A F + + LEE P++ E F A I LYG+ M
Sbjct: 63 QAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 122
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E+A + F EM E + + +FNALL A +K + V+ +F E P I+PD+ +YN
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK C + A +++ E++ K +KP+ +F L+ Y + K+E+ ++ M
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN R+ L K E +L D++ +KP+ T++ I GF +G +EA
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+Y+ + +G P V+ +++ +CK GD E+A CKE AK + + ++ +V L
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Query: 367 AGASKVSEAKELIGLVK 383
SK EA+E++ L K
Sbjct: 363 VKGSKQDEAEEIVELAK 379
>gi|224134358|ref|XP_002327818.1| predicted protein [Populus trichocarpa]
gi|222836903|gb|EEE75296.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 192/354 (54%), Gaps = 3/354 (0%)
Query: 49 LKSESNPEKILEICRAAALTPES-HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L++E +P+K L I AA+ S R A + + +L+ ++ F I +E KT P +
Sbjct: 29 LRTEHDPDKALAIYSAASNNDSSPAASRYAQDLTVRRLATSHRFTDIESLIESRKTDPKI 88
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
+ E F + I YG A M + A++T+ +MD+ S +FNALL A ++ Y +V +
Sbjct: 89 KQEPFLSSLIRSYGVAGMFDQAMKTYHQMDQLGTPRSSISFNALLSACVQSRLYNKVPGL 148
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F E + Y + PD +Y ++K++CE A +L EM++K ++ + L+ Y
Sbjct: 149 FDEISEKYRVLPDKVSYGILVKSYCEDGKPDKANEVLREMEKKGVEVTTVVYTTLLNCLY 208
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ K E+ + M + G + ++YNV+I + K + K L+++M + +KP+++
Sbjct: 209 SKGKNEEAERFWHAMVKRGCELDAAVYNVKISNAMK-QGPERVKELIEDMENSALKPDTI 267
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y++ I +C G E+AKK Y + G N++ + T+V+ +CK G+YE KES
Sbjct: 268 SYNYLITSYCMTGMMEDAKKVYEGLEGYGCKANAATFRTLVFHLCKNGEYEKGYRLFKES 327
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
+ +P+F T+K L GLA K+ EAK LI +K+KF N ++ W ++E L
Sbjct: 328 VRVHRIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMKKKFPPNLLNAWKKVEESL 381
>gi|224076667|ref|XP_002304978.1| predicted protein [Populus trichocarpa]
gi|222847942|gb|EEE85489.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 163/302 (53%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++I + +L + N + I++ L+ K PD+ NE F AH I LYG+A M + A + F EM
Sbjct: 59 YAITVKRLIKYNRLSMINEILDHQKNFPDMTNETFTAHLIYLYGKAGMFDDARKLFDEMP 118
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ K +V +FNALLLA A+ + E+K++ +F GI D+ +Y+ I FC+ D
Sbjct: 119 DLKCPRTVFSFNALLLACINARRFDEIKKLLADFRSELGITFDVVSYSIAINGFCKMGDL 178
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
SA + EM + ++PN +F L+ GFY K+ D ++ M + V YN +
Sbjct: 179 VSAEMVFDEMIKSDVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYNAK 238
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+H+L + EA +++EM KG++ + +++ I GF + EEAK++Y M G
Sbjct: 239 LHALALENRMKEAIEVVEEMRDKGLELDVFSFNALIRGFLNGEDLEEAKQWYGEMRRHGC 298
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN + ++ F+C+ GD A+ C+E K W ++ +V L +K+ +A++
Sbjct: 299 EPNRVTFQFLIPFLCEKGDVGFAVEICEEIFDKKWHARAEVLQLVVNRLVMEAKIQDAEK 358
Query: 378 LI 379
L+
Sbjct: 359 LV 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVSMYNV 256
A + EM SF AL+ +++++ K+L G+ V Y++
Sbjct: 108 DDARKLFDEMPDLKCPRTVFSFNALLLACINARRFDEIKKLLADFRSELGITFDVVSYSI 167
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I+ CK+ A+ + DEM+ ++PN +T++ + GF +G F + ++ + M
Sbjct: 168 AINGFCKMGDLVSAEMVFDEMIKSDVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMN 227
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+ P+ Y ++ + + A+ +E KG + + +L+ G + EAK
Sbjct: 228 VVPDVRSYNAKLHALALENRMKEAIEVVEEMRDKGLELDVFSFNALIRGFLNGEDLEEAK 287
Query: 377 ELIG 380
+ G
Sbjct: 288 QWYG 291
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 1/205 (0%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D Y +K + + S IL N + L+ + K ++D K+
Sbjct: 57 DIYAITVKRLIKYNRLSMINEILDHQKNFPDMTNETFTAHLIYLYGKAGMFDDARKLFDE 116
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDG 300
M V +N + + R+ E K LL + S+ G+ + V+YS I GFCK G
Sbjct: 117 MPDLKCPRTVFSFNALLLACINARRFDEIKKLLADFRSELGITFDVVSYSIAINGFCKMG 176
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ A+ + M S + PN + T++ G + + VP+ +
Sbjct: 177 DLVSAEMVFDEMIKSDVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYN 236
Query: 361 SLVTGLAGASKVSEAKELIGLVKEK 385
+ + LA +++ EA E++ +++K
Sbjct: 237 AKLHALALENRMKEAIEVVEEMRDK 261
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 169/304 (55%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
I +L+ A F + + LE K D+ E F+A I LYG + M ++A + F EM E K
Sbjct: 66 IRRLAAAKKFRYVEEILENQKQYQDMSKEGFNARLISLYGSSGMFDNARKVFDEMLERKC 125
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+V +FNALL A +K + EV +F + I+PDL +YN V+KAFCE SA
Sbjct: 126 ARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKAFCEMGSLDSAV 185
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+L E+++K +KP+ +F L+ G Y +++ ++ Q M+ +K YN ++ L
Sbjct: 186 SLLDEIEKKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRSYNEKLLGL 245
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
++ +A +++EM S+G++ + +Y+ I GF +G+ EEAK +Y + S + P+
Sbjct: 246 ALEKRMKDATKVVEEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKSDIKPDK 305
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+ T++ F+ + GD A CK++++ ++ ++ LA SK++EAKEL+ L
Sbjct: 306 LTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESKINEAKELVEL 365
Query: 382 VKEK 385
K +
Sbjct: 366 SKAR 369
>gi|18398767|ref|NP_565439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216725|sp|Q9ZU67.1|PP162_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g18520, mitochondrial; Flags: Precursor
gi|4218007|gb|AAD12215.1| expressed protein [Arabidopsis thaliana]
gi|21617890|gb|AAM66940.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
gi|330251683|gb|AEC06777.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 418
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 191/356 (53%), Gaps = 10/356 (2%)
Query: 49 LKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L+ +P+K L I ++ + S L R A + + +L+++ F+ I +E K P +
Sbjct: 40 LRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKI 99
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
+ E F + I YG+A+M +HA++ F+EMD+ +V +FNALL A + ++ V ++
Sbjct: 100 KTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQL 159
Query: 168 FIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
F EFP+ Y I PD +Y +IK++C+S A I+ +M+ K ++ +F ++
Sbjct: 160 FDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSL 219
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
YK ++ + M G ++YNVR+ + K K L++EM S G+KP++
Sbjct: 220 YKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDT 278
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL-SPNSSVYFTMVYFMCKGGDYETALGFCK 345
V+Y++ + +C G EAKK Y GL PN++ + T+++ +C G Y+ L K
Sbjct: 279 VSYNYLMTAYCVKGMMSEAKKVYE-----GLEQPNAATFRTLIFHLCINGLYDQGLTVFK 333
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT-WNEIEAGL 400
+S +P+F T K L GL +++ +A+ + +VK+KF + T W ++E L
Sbjct: 334 KSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEKL 389
>gi|413952228|gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
Length = 453
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 180/344 (52%), Gaps = 6/344 (1%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDR-LAFSIAINKLSEANYFNGISQYLEELKTR 104
L ++ E +P+K++ A + E ++ + +A+ +L+ +GI+ ++ K
Sbjct: 57 LQVIFRERDPDKLVSQFIAESTASERFRNKHRVYDVAVARLASFGRHDGIAAIIDSQKPF 116
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMD-EHKLRHSVGAFNALLLALTIAKDYKE 163
+ F A I L G+A+M HA F ++ +HK S FNALL A A D+
Sbjct: 117 IAASSVGFAARLIRLCGRASMPSHAAAIFHDLPPKHK---SSMTFNALLAAYLDASDFDA 173
Query: 164 VKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+ E P T+ I P + ++N +I A C+ D S+A ++ M+++ I P+ SF L
Sbjct: 174 LATALQEIPATHPTIAPTIYSHNILISALCKKPDLSAAVDVITLMEKRGITPDIISFNIL 233
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GFY ++++DV KV +MM+ ++ YN ++ L + +A AL++ M +G
Sbjct: 234 LNGFYSNDRFDDVEKVWEMMKERNVEPDARSYNAKLRGLVSQGRVEDAAALIERMQKEGP 293
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+SV+Y+ I G+C +G EAKK Y M +G +PN + T+V + G+ + AL
Sbjct: 294 KPDSVSYNELIRGYCNEGRLNEAKKVYDNMIKNGYAPNRGTFHTLVPHFVEAGELDHALS 353
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
C E + + ++ +VT L AS+V EAK ++ L +E +
Sbjct: 354 CCHEIFTRKCRVQCSLLQGVVTALFAASRVEEAKRIVHLGRENY 397
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 195/395 (49%), Gaps = 19/395 (4%)
Query: 15 SQKHHRYLATSSILSSGDKTPLTS--KDKTRAALTLLKSESNPEKILEICRA---AALTP 69
+ H R L+++ ++G P + D R L+ E +P++++ I A A+++
Sbjct: 14 THAHGRRLSSALSTTTGGTDPGATPFSDAKRQ----LRRERDPDRVVSILDAIDTASISA 69
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEH 128
S R A S+A +LS + F L T N H +++ Y AN+ E
Sbjct: 70 AS--TRHALSLAARRLSLSRRFAEAEALLSSHLT---ASNTETHLAAVLCCYAAANLPEK 124
Query: 129 AVRTFKEMDEHKLRHSVGA--FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
A+ F+ L + FNALL + Y+ V +F E K + I PD +Y
Sbjct: 125 AIDAFRSA-APSLPAPISPLPFNALLSTFVRCRRYRRVPVLFAELSKEFSITPDATSYAI 183
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++KA+C + D + A +L M + I P AS + +L+ YK + + + + M G
Sbjct: 184 LVKAYCMNRDDAKAKQVLDLMREQGISPTASIYTSLIDSMYKRKMTNEAESLWKEMVESG 243
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YNV+ K E ++ EM + G+KPN++TY++ + +CK G E+AK
Sbjct: 244 CEPDVVTYNVKALYYMAHGKPEEVIEVMTEMEAAGLKPNTITYNYLMISYCKSGKLEDAK 303
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y ++ G S ++ Y M+ +C GD++ LG K+S+ K VP+F TMK LV GL
Sbjct: 304 VLYHSLAEKGCSADAYTYKHMLAELCAHGDFDAGLGIFKDSLKKRKVPDFRTMKRLVEGL 363
Query: 367 AGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
A +V++AKE+I VK F +N + W ++E L
Sbjct: 364 AKGGRVADAKEVIAEVKNMFPENLLSGWKKVEKEL 398
>gi|297847954|ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337700|gb|EFH68117.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 395
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 5/365 (1%)
Query: 7 LRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAA 66
LR N+ + + AT + S +P + +++ E NP++I+E + A
Sbjct: 8 LRGTFNISTIRRFSSAATVTTAVSAAISP-----PQNSLTSIVNGERNPQRIVEKFKKAC 62
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
+ + + + +L A + + + LEE K D+ E F A I LYG+A M
Sbjct: 63 ESERFRNNIAVYDRTVRRLVAAKRLHFVEEILEEQKKYRDMSKEGFAARIISLYGKAGMF 122
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E+A + F EM + + SV +FNALL A ++K + V+++F E P IKPD+ +YN
Sbjct: 123 ENAQKVFDEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKLSIKPDIVSYNT 182
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IKA CE A ++L E + K +KP+ +F L+ Y + ++E ++ +
Sbjct: 183 LIKALCEKDSLPEAVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKLVEKN 242
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN R+ L K E +L +E+ + G+KP+ +++ I G G +EA+
Sbjct: 243 VPIDIRTYNARLLGLASEVKSKELVSLFEELKASGIKPDVFSFNAMIRGSINQGKMDEAE 302
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+Y+ + G P+ + + ++ MCK GD+E A+ KE+ +K ++ TT++ LV L
Sbjct: 303 SWYKEIVKHGYRPDKATFALLLPAMCKAGDFEFAIELFKETFSKRYLVGQTTLQQLVDEL 362
Query: 367 AGASK 371
SK
Sbjct: 363 VKGSK 367
>gi|413934837|gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 16/358 (4%)
Query: 25 SSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINK 84
SS S T +++ + L +K E +PE++ ++ RA A +R AF A+ +
Sbjct: 162 SSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVAR 221
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHS 144
L+ A + + + LE+ K P + HA+RTF+EM + +
Sbjct: 222 LAGARRNDLVEEILEQHKALP----------------RGGGKGHALRTFQEMGMYGCPRT 265
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
+ NA + L A+ + E +F E P+ Y ++ D + N V+K FC+ D +AY ++
Sbjct: 266 AKSLNATMKVLLRARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVM 325
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M+R ++ + ++ L+A FYK ++E + + +M G ++ YNVRI L
Sbjct: 326 QGMERAGLRSDVITYMTLMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNR 385
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A + ++ G+KP+ +TY+ I GF G E AK + M G PNS VY
Sbjct: 386 GRGWQANEMARKIYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVY 445
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
TMV+++C+ D++ A CK+S+ K W P+ T+ L+ GL SK KE++ LV
Sbjct: 446 QTMVHYLCERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLV 503
>gi|413934838|gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 16/358 (4%)
Query: 25 SSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINK 84
SS S T +++ + L +K E +PE++ ++ RA A +R AF A+ +
Sbjct: 162 SSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVAR 221
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHS 144
L+ A + + + LE+ K P + HA+RTF+EM + +
Sbjct: 222 LAGARRNDLVEEILEQHKALP----------------RGGGKGHALRTFQEMGMYGCPRT 265
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
+ NA + L A+ + E +F E P+ Y ++ D + N V+K FC+ D +AY ++
Sbjct: 266 AKSLNATMKVLLRARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVM 325
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M+R ++ + ++ L+A FYK ++E + + +M G ++ YNVRI L
Sbjct: 326 QGMERAGLRSDVITYMTLMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNR 385
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A + ++ G+KP+ +TY+ I GF G E AK + M G PNS VY
Sbjct: 386 GRGWQANEMARKIYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVY 445
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
TMV+++C+ D++ A CK+S+ K W P+ T+ L+ GL SK KE++ LV
Sbjct: 446 QTMVHYLCERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLV 503
>gi|357150324|ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 468
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 189/369 (51%), Gaps = 23/369 (6%)
Query: 44 AALTLLKSESNPEK---ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG----ISQ 96
AA T L+ E + ++ +L+ A+L+ S R A S+A +LS A F +S
Sbjct: 40 AAKTRLRREYDADRAVSLLDAIDTASLSAAS--TRHALSLAARRLSRAGRFADAEALLSS 97
Query: 97 YLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGA--FNALL 152
++ T P L S IL Y A + E A+ F+ L + FNALL
Sbjct: 98 HIPASPTEPHL--------SAILCSYASAALPEKALEAFRSAAP-SLPSPISPMPFNALL 148
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A + ++ V +F E K + I PD +Y ++KA C + A+ +LA+M + I
Sbjct: 149 SAFVRCRRHRRVPVLFTELSKEFSITPDATSYGILVKAHCMVRHDAKAHEVLAQMREEGI 208
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P + F ++ YK++K E+ + + M G K + YNV+ + K +
Sbjct: 209 SPTTTIFTTMIDSMYKQKKIEEAETLWKQMLESGCKPDQATYNVKAMNFGLHGKPEDVLL 268
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
++ EM + G+KP+++TY+ + +CK+G E+AK Y + G SPN++ Y M+ ++
Sbjct: 269 VMAEMEAAGVKPDTITYNFLMTSYCKNGKVEDAKGLYHSLGAKGCSPNAATYKHMMAYLF 328
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VD 391
GD++ A+ +ES++K VP+F TMK V GLA KV+EAK++I VK+ F +N +
Sbjct: 329 AHGDFDAAMKIFRESLSKHKVPDFKTMKGFVEGLAKGGKVAEAKDVISEVKKMFPENLLS 388
Query: 392 TWNEIEAGL 400
W ++E L
Sbjct: 389 GWKKLEKEL 397
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 147/271 (54%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
A+ L++A F+ I LE K ++ E F I LYG+A M EHA + F EM +
Sbjct: 176 AVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLN 235
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+V +FNALL A +K + ++ F E P+ GI PD+ +YN ++ AFCE SA
Sbjct: 236 CERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSA 295
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
S+L EM++ ++P+ +F L+ FY+ D K+ +M++ + V YN ++
Sbjct: 296 LSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRG 355
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ + +EA L+DEM + G+KP+ T + + GFC GN EEAK+++ ++ + L P
Sbjct: 356 VISENRMSEAVNLIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPPV 415
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ Y ++ F+ + D+E A CKE K
Sbjct: 416 RATYMRLIPFLVEKDDFEMATELCKEVFQKA 446
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 112/244 (45%), Gaps = 2/244 (0%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K D + R G + +L L AK + ++ + +E K Y R+I + +
Sbjct: 159 KSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDI-LEHQKQYNEISTEVFAVRLITLYGK 217
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER-YGMKSGVS 252
+ A+ + EM + + + SF AL++ +K++ ++ Q + R G+ V
Sbjct: 218 AGMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVV 277
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ +++ C++ A ++LDEM G++P+ +T++ + F + G+ + +K + +M
Sbjct: 278 SYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLM 337
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ ++PN Y + + A+ E G P+ T+ SL+ G A +
Sbjct: 338 KKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEMKTSGIKPDVFTLNSLMKGFCNAGNL 397
Query: 373 SEAK 376
EAK
Sbjct: 398 EEAK 401
>gi|297735184|emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 178/358 (49%), Gaps = 47/358 (13%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKT 103
A ++L+SE +P++ LEI + + S L R A + + +L+++ F I +E K
Sbjct: 40 AKSILRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKN 99
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
P + E + + T+ + Y
Sbjct: 100 DPKITQEPYLS-----------------------------------------TLIRSY-- 116
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
V + F E P+ YG+ PD +Y ++K++CES S A S+L EM+ K ++ A +F ++
Sbjct: 117 VPKFFEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTIL 176
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
YK+ + + KV M + G V YNV+I KAL+DEM + G+K
Sbjct: 177 DALYKQGQSDRAEKVWHEMAKKGCLD-VGAYNVKIM-FAHGGDPENVKALIDEMSNAGLK 234
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P++++Y++ + +CK G +EAKK Y + +G PN++ + T++Y++C+ GD+ET
Sbjct: 235 PDTISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKV 294
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
K+S + +P+F T++ LV GL K EAK LI VK+ F N ++ W ++E L
Sbjct: 295 FKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDL 352
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 179/364 (49%), Gaps = 4/364 (1%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
+P+ S + + L+ S+S+P EI A+L P +F I I KL A F+
Sbjct: 9 SPIGSPSRVQ---KLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSL 65
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ L LK+ N + I +YG+AN+ + A++TF M + + N LL
Sbjct: 66 MQDLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQ 125
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L ++Y + YG+ PD +YN ++ AFC + D S AY++ +M ++ +
Sbjct: 126 LLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVA 185
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ S+ L+ G ++ + +L+ M G Y ++SLC+ +K EA L
Sbjct: 186 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKL 245
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L M KG P+ V Y+ I GFC++G +A K M ++G SPN Y T+V +C
Sbjct: 246 LCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCD 305
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
G Y+ A + +E ++KG+ P+F+ +L+ G K+ EA E++ +++ + +T
Sbjct: 306 QGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTET 365
Query: 393 WNEI 396
W I
Sbjct: 366 WVAI 369
>gi|242054629|ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
gi|241928435|gb|EES01580.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
Length = 439
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 167/311 (53%), Gaps = 5/311 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+ +A+ +L+ + I+ ++ K + + F A + L G A+M HA F +
Sbjct: 76 YEVAVARLASFGRHDAIAAIIDSQKPFIEASSVGFAARLVRLCGGASMPSHAAAIFHGLP 135
Query: 138 -EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESS 195
+HK SV FNALL A A D+ + F + P ++ I P + +YN +I A C+
Sbjct: 136 PKHK---SVMTFNALLAAYVDASDFDALTTTFQQIPASHPTIIPTVYSYNILISALCQKP 192
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ S+A ++A M+++ + P+ SF L+ GFY + ++D KV +MM+ ++ YN
Sbjct: 193 ELSAALDVIALMEKRGVSPDIISFNILLNGFYNNDSFDDAEKVWEMMKERNIEPDEKSYN 252
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
++ L + +A AL++ M +G KP+SV+Y+ I G+CK+G EAKK Y + +
Sbjct: 253 AKLRGLVSQGRVEDAVALIERMQKEGPKPDSVSYNELIRGYCKEGRLNEAKKVYDDLIKN 312
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+PN + T+V + + G+ + AL C E ++ + + ++ +VT L AS++ EA
Sbjct: 313 ECAPNRGTFHTLVPHLVEAGELDRALSCCHEIFSRKCRVHCSLLQGVVTALIAASRMGEA 372
Query: 376 KELIGLVKEKF 386
K ++ L ++ +
Sbjct: 373 KRIVHLGRKNY 383
>gi|297836596|ref|XP_002886180.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332020|gb|EFH62439.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 421
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 199/382 (52%), Gaps = 17/382 (4%)
Query: 23 ATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIA 81
A ++ +SSG T +K K R +P+K L I ++ + S L R A +
Sbjct: 17 AAATNVSSGAITISKAKSKLRKV-------HDPDKALAIYKSVSNNSSSPLSSRYAMELT 69
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+ +L+++ F+ I +E K P ++ E F + I YG+A+M +HA++ F+EMD+
Sbjct: 70 VQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDQIGT 129
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSA 200
+V +FNALL A + ++ V ++F E P+ Y I PD +Y +IK++C+S A
Sbjct: 130 PRTVVSFNALLAACLHSDLFERVPQLFDEIPQRYNNITPDKVSYGMLIKSYCDSGSPEKA 189
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
I+ +M+ K ++ +F ++ YK + + M G + ++YNVR+ +
Sbjct: 190 MEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDVAESLWTEMVNKGCELDNTVYNVRLMN 249
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL-SP 319
K + L++EM S G+KP++V+Y++ + +C G EAKK Y GL P
Sbjct: 250 AAK-ESPERVEELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMGEAKKVY-----EGLEQP 303
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N++ + T+++ +C G Y+ L K+S +P+F T K L GL +++ +A+ +
Sbjct: 304 NAATFRTLIFRLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVA 363
Query: 380 GLVKEKFTKNVDT-WNEIEAGL 400
VK+KF + T W ++E L
Sbjct: 364 RTVKKKFPPRLVTEWKKLEEKL 385
>gi|449479644|ref|XP_004155662.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 19/309 (6%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
F+ I +E K +++ E F I LYG+A M HA + F E+ E +V +FNA
Sbjct: 89 FSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNA 148
Query: 151 LL------------------LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
LL + +K++ +++ +F E P+ I+ D+ +YN VI A+C
Sbjct: 149 LLTSCANSKEFEQLETMFREIPCANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAYC 208
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +M++ +PN +F L+ Y + ++ D + ME + +
Sbjct: 209 KMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDLI 268
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN R+ + ++ + LL EM K +KPN +Y I GFC+DG+ E+AK++Y +
Sbjct: 269 SYNARLQRMVLEKRIQDGIQLLAEM-EKAIKPNVDSYYILIEGFCEDGDLEQAKQWYYKL 327
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++ ++PN+S+Y T++ C+ GD+++ L CKES G V ++ +V GL SK+
Sbjct: 328 KDNEVNPNASIYRTLLPLYCEKGDFDSGLQLCKESFDNGLVFLAEEVQRVVDGLIEVSKI 387
Query: 373 SEAKELIGL 381
EAK+L+ L
Sbjct: 388 EEAKDLVAL 396
>gi|242054627|ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
gi|241928434|gb|EES01579.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
Length = 429
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 174/338 (51%), Gaps = 23/338 (6%)
Query: 46 LTLLKSESNPEKIL-EICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
+ ++ E +P+K++ + A+ +P +R + +A+++L+ + ++ L+ K
Sbjct: 65 MRVISEERDPDKLVSQFIAASTASPRFRDNRRVYEVAVSRLASFGRRDAVAALLDSQKPF 124
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMD-EHKLRHSVGAFNALLLALTIAKDYKE 163
+ NE F + LYG+A+M HA TF + +HK SV AFNALL A D+
Sbjct: 125 LEASNEDFTVRILRLYGRASMPSHAAATFVGLPPKHK---SVAAFNALLAAYVDTGDFDS 181
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ E P + +P S+A +++ MD+ + P+ SF +L+
Sbjct: 182 LAIALDEIPGSQKAEP------------------SAALDVISLMDKCGLTPDMVSFNSLL 223
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GFY +++ K+ +MM+ ++ YN ++ L + +A A++ ML +G K
Sbjct: 224 NGFYNNGRFDKAEKIWEMMKERNLQPNAKTYNAKLRGLVAEGRMEDAAAVIQRMLKEGPK 283
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+SV+Y+ I G+CK+G +E+KK Y + +G +PN + T++ + + G+ + AL
Sbjct: 284 PDSVSYNELIRGYCKEGRLDESKKVYDELVKNGYAPNKGTFETLIPCLVEVGELDLALNC 343
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
C+E + + ++++VT L AS+V EA+ ++ L
Sbjct: 344 CQEIFNRKCRVKCSLLQAVVTALVAASRVEEARRIVKL 381
>gi|297743432|emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 143/263 (54%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LK+E +PE++ ++ +A A +R AF +++L+ A F+ I LE KT
Sbjct: 45 ALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTL 104
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A M + AV TF +M + +V +FNA L LT + D + +
Sbjct: 105 PQGRREGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAI 164
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ P +GI+ D+ + N VIKA C+ AY ++ EM++ + P+ ++ L++
Sbjct: 165 DLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLIS 224
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
FYK ++E N + +M G ++ +NVRI L R+ +A +L+ M G+ P
Sbjct: 225 AFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITP 284
Query: 285 NSVTYSHFIYGFCKDGNFEEAKK 307
+ VTY+ I GFC+ G E AKK
Sbjct: 285 DEVTYNLVIKGFCQAGYLEMAKK 307
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 77/193 (39%), Gaps = 1/193 (0%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME-R 244
R+I + ++ A +M + SF A + + E ++ L+ + +
Sbjct: 115 RIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFK 174
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+G++ V N+ I +LC + +A ++ EM G+ P+ VTY+ I F K +E
Sbjct: 175 FGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEV 234
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ +M G PN + + + ++ A G P+ T ++
Sbjct: 235 GNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIK 294
Query: 365 GLAGASKVSEAKE 377
G A + AK+
Sbjct: 295 GFCQAGYLEMAKK 307
>gi|156070774|gb|ABU45188.1| unknown [Capsicum frutescens]
Length = 373
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 188/363 (51%), Gaps = 25/363 (6%)
Query: 42 TRAALTLLKSESNPEKILEICRAAA---LTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
T AA+ LK+E +P+K L+I + + ++P S R A + +L++++ F+ +L
Sbjct: 14 TTAAMPKLKAEHDPDKALQIYSSVSDRYISPLS--SRYAQEYTVKRLAKSHRFSDSENFL 71
Query: 99 EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
E K + E F + I YG A M +HA++ +MD S +FN LL A +
Sbjct: 72 ESHKNSSKITQEPFLSSIIRSYGVAGMFDHALKICHQMDHLGTPRSAISFNVLLSACVHS 131
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
K Y V ++F E P + +D Y +IK C L EMD K ++ +
Sbjct: 132 KLYDRVAQLFDEMPVS------MDFY--LIK--CPMG--------LKEMDEKDVEITTVA 173
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F ++ FYK+ K ++ +V M G V YNV+I ++ + KAL++EM
Sbjct: 174 FTTILHSFYKKGKSDEAERVWNEMVNKGCGPDVGAYNVKIMNI-QGGDPEGVKALIEEMS 232
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+KP++++Y++ + + ++ E +K Y + +G +PN++ + T+++++ K G YE
Sbjct: 233 DAGLKPDTISYNYLMTCYFRNELMNEVQKVYEDLEANGCNPNAATFRTLIFYLSKKGKYE 292
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIE 397
KES+ +P+F T++ LV GL SK++EAK + VK+KF N V W ++E
Sbjct: 293 AGYKVFKESVRVNKIPDFNTLEYLVEGLVKRSKLNEAKRMSKTVKKKFPPNLVKAWTKLE 352
Query: 398 AGL 400
L
Sbjct: 353 EEL 355
>gi|388521641|gb|AFK48882.1| unknown [Medicago truncatula]
Length = 129
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M++ G KPNSV+Y H + GFC++GN EEAK + M G + YFT+VYF+C+G +
Sbjct: 1 MITSGRKPNSVSYYHLMNGFCREGNLEEAKGLFADMKKRGFKVDGQCYFTLVYFLCEGDE 60
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
+E AL KE IAKGWVPNFTTMK LV GL G SKV +AKELI +KEKF + D W+EI
Sbjct: 61 FEWALDIAKECIAKGWVPNFTTMKKLVNGLVGVSKVDDAKELIKEIKEKFAEKSDRWDEI 120
Query: 397 EAGL--PQ 402
EAGL PQ
Sbjct: 121 EAGLSPPQ 128
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KPN+ S+ L+ GF +E E+ + M++ G K Y ++ LC+ + A
Sbjct: 7 KPNSVSYYHLMNGFCREGNLEEAKGLFADMKKRGFKVDGQCYFTLVYFLCEGDEFEWALD 66
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ E ++KG PN T + G ++AK+ +
Sbjct: 67 IAKECIAKGWVPNFTTMKKLVNGLVGVSKVDDAKELIK 104
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 190/385 (49%), Gaps = 23/385 (5%)
Query: 26 SILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRA---AALTPES--HLDRLAFSI 80
++ ++ + PLT+ AA T L+ E +P++++ + A A+L+ S H LA
Sbjct: 25 ALTTAAGEQPLTAS----AAKTRLRREHDPDRVVSLFEAIDDASLSASSTRHALSLAARR 80
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
A+ +S ++ T P L A + Y A++ E A+ F+
Sbjct: 81 LSRSRRFADAEALLSSHIPASPTEPQL------AAVLCSYAAASLPEKALAAFRSAAP-S 133
Query: 141 LRHSVGA--FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
L + FNA+L + ++ V +F E K + I PD +Y ++KA+C S +
Sbjct: 134 LPSPISPLPFNAVLSVFLRCRRHRRVPVLFDELSKEFSITPDASSYGILVKAYCMLSKDA 193
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A+ +L +M + P S + ++ YK++K E ++ + M G K ++YN +I
Sbjct: 194 KAHEVLDQMRGQGFTPTNSIYTTMIDSMYKQKKMEQAERLWKQMLESGRKPDQAVYNTKI 253
Query: 259 --HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
HSL K + ++ EM G+KP+++TY+ + +CK G E AK+ YR + G
Sbjct: 254 MHHSLHG--KTEDVLEVIAEMEEAGVKPDTITYNFLMTSYCKHGKMETAKELYRSLGEKG 311
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
S N++ Y M+ +C GD + AL KES VP+F TM LV GL A +V+EAK
Sbjct: 312 CSANAATYKHMMAQLCAHGDLDGALVIFKESYRSNKVPDFRTMSGLVEGLTKAGRVAEAK 371
Query: 377 ELIGLVKEKFTKN-VDTWNEIEAGL 400
++ +K+KF + + W ++E L
Sbjct: 372 NIVAKMKKKFPEQLLSGWMKLEKEL 396
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 9/382 (2%)
Query: 16 QKHHRYLATS-SILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLD 74
Q+H R L S S ++ K+P+ S + + L+ S+S+P EI A+ P
Sbjct: 43 QQHKRELEPSDSHPNANTKSPIGSPSRVQK---LIASQSDPLLAKEIFDYASRQPNFQHS 99
Query: 75 RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
++ I I KL A YF+ I L +LK++ ++ I +YG+AN+ + A++ F
Sbjct: 100 YSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFY 159
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF--PKTYGIKPDLDTYNRVIKAFC 192
+ + S N +L L ++Y +K F F TY + P+ +YN +I+AFC
Sbjct: 160 TILKFDCNPSPKHLNGILEILVSHQNY--IKPAFDLFKDAHTYDVFPNTKSYNILIRAFC 217
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S AYS+ +M ++ + P+ S+ L+ ++ + +L+ M G
Sbjct: 218 LNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDAL 277
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y ++SLC+ +K EA LL M KG P+ + Y+ I GFC++G +A K M
Sbjct: 278 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDM 337
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++G PN Y T+V +C G ++ A +E + KG+ P+F +L+ G K+
Sbjct: 338 ESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKI 397
Query: 373 SEAKELI-GLVKEKFTKNVDTW 393
EA ++ L+K + +TW
Sbjct: 398 EEACGVVEELLKHGEAPHTETW 419
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 4/370 (1%)
Query: 28 LSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSE 87
+ S K+P+ S + + L+ S+S+P EI A+ P R + I I KL
Sbjct: 40 IVSNPKSPIGSPTRVQK---LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGR 96
Query: 88 ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGA 147
YFN I L + ++ + I +Y +A + E + TF +M E
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N +L L + Y + + + +G+ P+ +YN +++AFC + D S AY + +M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + P+ S+ L+ GF ++ + ++L M G Y ++SLC+ +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA LL M KG P+ V Y+ I GFC++ +A+K M ++G SPNS Y T+
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKF 386
+ +C G ++ + +E I+KG+ P+F+ LV G KV EA +++ +V K
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 387 TKNVDTWNEI 396
T + DTW +
Sbjct: 397 TLHSDTWEMV 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ + + GQ N A+ +M ++ LL +L +E
Sbjct: 223 PDVDSYKILIQGFCRKGQVN---GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
++ K G PDL YN +I FC + A +L +M PN+ S+ L+
Sbjct: 280 YKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G + +++ K L+ M G S+ N + C K EA +++ ++ G
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKF 308
+S T+ I C + E+ K F
Sbjct: 399 HSDTWEMVIPLICNEDESEKIKLF 422
>gi|115440379|ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein 1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS [Oryza sativa Indica Group]
gi|113534000|dbj|BAF06383.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 4/335 (1%)
Query: 49 LKSESNPEKILEICRAAALT-PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L E +P+K++ AA+ T P + +A+++L+ +G+ ++ K +
Sbjct: 67 LLRERDPDKLVSGFIAASSTHPRFRARHRVYDVAVSRLATFGRLDGVEAIIDAQKPFLET 126
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
E F A I LYG A+M HA TF ++ S FN+LL A A +++ +
Sbjct: 127 SKEGFAARLIRLYGHASMASHAAATFHDLPPQ--LKSTMTFNSLLAAYVEAGEFEALAAA 184
Query: 168 FIEFP-KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
F E P + P + +YN +++A C+ D S+A + M++ I P+ +F L+ GF
Sbjct: 185 FKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTMTLMEKSGISPDLVTFNTLLNGF 244
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
Y + KV +M+ M YN ++ L + +A A++++M G KP++
Sbjct: 245 YNHGDMDGAEKVWEMITERNMVPDAKNYNAKLRGLVAQGRIEDAVAVVEKMEKDGPKPDT 304
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
++Y+ I G+CKDG EEAKK + M+ +G N Y T++ + K G+ + AL C E
Sbjct: 305 ISYNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYALKCCHE 364
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
K + ++ +VT L AS+V +A +++ L
Sbjct: 365 IYGKNLRVDCFVLQEVVTALVTASRVEDATKIVEL 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 95/242 (39%), Gaps = 3/242 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTF 133
+ F+ + EA F ++ +E+ ++++I+L + + A+ T
Sbjct: 163 MTFNSLLAAYVEAGEFEALAAAFKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTM 222
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M++ + + FN LL D ++V+ E + PD YN ++
Sbjct: 223 TLMEKSGISPDLVTFNTLLNGFYNHGDMDGAEKVW-EMITERNMVPDAKNYNAKLRGLVA 281
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +++ +M++ KP+ S+ L+ G+ K+ + E+ K+ + M G +
Sbjct: 282 QGRIEDAVAVVEKMEKDGPKPDTISYNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGT 341
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I L K + A E+ K ++ + + E+A K +
Sbjct: 342 YHTLIPCLVKAGELDYALKCCHEIYGKNLRVDCFVLQEVVTALVTASRVEDATKIVELGW 401
Query: 314 NS 315
N+
Sbjct: 402 NN 403
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEH-KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
Y AN+ E A+ F+ +S FNALL + Y+ V +F E K + I
Sbjct: 119 YASANLPEKAIDAFRSAAPSLPTPNSPLPFNALLSTFIRCRRYRRVPVLFAELSKEFSIT 178
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ +Y ++KA+C + D + A L M + I P + L+ YK + + +
Sbjct: 179 PNATSYGILVKAYCMARDDAKAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESL 238
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + V+ YNV+ K E ++ EM + G+KP++ TY+ + +CK
Sbjct: 239 WKEMVESECEPDVATYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCK 298
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G E+AK Y ++ G S +++ Y M+ +C GD++ LG K+S+ + VP+F T
Sbjct: 299 SGKLEDAKVLYHSLAEKGCSADAATYKHMLAELCAYGDFDAGLGIFKDSLKRRKVPDFRT 358
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIEAGL 400
MK LV GLA +V++AKE++ VK+ F +N + W ++E L
Sbjct: 359 MKGLVEGLAKGGRVADAKEVVAEVKKMFPENLLSGWKKVEKEL 401
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 4/370 (1%)
Query: 28 LSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSE 87
+ S K+P+ S + + L+ S+S+P EI A+ P R + I I KL
Sbjct: 40 IVSNPKSPIGSPTRVQK---LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGR 96
Query: 88 ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGA 147
YFN I L + ++ + I +Y +A + E + TF +M E
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N +L L + Y + + + +G+ P+ +YN +++AFC + D S AY + +M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + P+ S+ L+ GF ++ + ++L M G Y ++SLC+ +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA LL M KG P+ V Y+ I GFC++ +A+K M ++G SPNS Y T+
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKF 386
+ +C G ++ + +E I+KG+ P+F+ LV G KV EA +++ +V K
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 387 TKNVDTWNEI 396
T + DTW +
Sbjct: 397 TLHSDTWEMV 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ + + GQ N A+ +M ++ LL +L +E
Sbjct: 223 PDVDSYKILIQGFCRKGQVN---GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
++ K G PDL YN +I FC + A +L +M PN+ S+ L+
Sbjct: 280 YKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G + +++ K L+ M G S+ N + C K EA +++ ++ G
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKF 308
+S T+ I C + E+ K F
Sbjct: 399 HSDTWEMVIPLICNEDESEKIKLF 422
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+KEM K+ ++ FN ++ L + V ++ K +G P++ TYN +I +
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV-VDDMKVWGFWPNVVTYNTLIDGY 275
Query: 192 CESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ Y +IL EM + PN+ +F L+ GF K+E KV + M+ G+K
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN ++ LC K EAK LLDEMLS +KPN +TY+ I G+CK EEA++
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + GL+PN + T+++ CK G E A K + KG++PN +T L+ G
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455
Query: 369 ASKVSEAKELI 379
K+ E K L+
Sbjct: 456 EGKMEEVKNLL 466
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVR 131
+ + F++ I+ + + + EE++++ L+ +S++ L + + E V
Sbjct: 302 NSVTFNVLIDGFCKDENLSAALKVFEEMQSQ-GLKPTVVTYNSLVNGLCNEGKLNEAKV- 359
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM L+ +V +NAL+ K +E + +F K G+ P++ T+N ++ +
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQ-GLTPNVITFNTLLHGY 418
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A+ + M K PNAS++ L+ GF +E K E+V +L M+ G+K+
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I + C+ ++ +A L+DEML KG+KP+ +TY+ + G+C +GN A +
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
M G N Y ++ C+ G E A G E + KG +PN TT
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 5/328 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN L + N ++++K P++ G+ A
Sbjct: 231 ITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAI 290
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
KEM E+K+ + FN L+ ++ +VF E ++ G+KP + TYN ++ C
Sbjct: 291 LKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEM-QSQGLKPTVVTYNSLVNGLC 349
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L EM ++KPN ++ AL+ G+ K++ E+ ++ + + G+ V
Sbjct: 350 NEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI 409
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N +H CK K EA L ML KG PN+ TY+ I GFC++G EE K M
Sbjct: 410 TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM 469
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ ++ Y ++ C+ + + A E + KG P+ T L+ G +
Sbjct: 470 QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL 529
Query: 373 SEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
A L + KE NV T+N + G
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQG 557
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
Y K + + N ++ A + ++ + EM R+ I PN +F ++ G K K
Sbjct: 189 YRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA---EAKALLDEMLSKGMKPNSVTYSH 291
V+ M+ +G V YN I CK+ + +A A+L EM+ + PNSVT++
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNV 308
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GFCKD N A K + M + GL P Y ++V +C G A E ++
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
PN T +L+ G + EA+EL + K+ T NV T+N + G
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG 417
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E A K M E + +N L++ +EVK + E + G+K
Sbjct: 418 YCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM-QCRGVKA 476
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN +I A+CE + A ++ EM K +KP+ ++ L+ G+ E +
Sbjct: 477 DTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLR 536
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ ME+ G + V YNV I C+ K +A LL+EML KG+ PN TY
Sbjct: 537 KQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ A+ E+S + K + S L++ KE ++ V V + M R
Sbjct: 166 LVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRK 225
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK---DGNFE 303
+ + +N I+ LCK+ K +A ++D+M G PN VTY+ I G+CK G
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M + +SPNS + ++ CK + AL +E ++G P T SLV
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
GL K++EAK L+ ++ NV T+N + G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALING 382
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 17/179 (9%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
L N + I+ + + E EM ++ +N L+ A K+ K+ R
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ E G+KP TYN ++ +C + +A ++ +M+++ N ++ L+ G+
Sbjct: 500 LIDEMLDK-GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
++ K ED N +L M G+ + Y + + +EM+ KG P+
Sbjct: 559 CRKGKLEDANGLLNEMLEKGLIPNRTTYEI----------------IKEEMMEKGFLPD 601
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 164/329 (49%), Gaps = 6/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++I I+ A + + LEE+K+ + H I A + A+
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M +V + AL+ A AK +E ++ E + G P+L TYN ++ A C+
Sbjct: 171 RSMG---CDPNVVTYTALIAAFARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLVDALCK 226
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S +A ++ +M PN +F +LV GF K +D K+L +M GM+ V
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I LCK +K EAK +L+EM ++G+ P++ TYS I+G CK EEA++ R M+
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SG +P+ VY ++++ CK G A +E + P+ T +++ GL K++
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406
Query: 374 EAKELIGLVKE--KFTKNVDTWNEIEAGL 400
EA+ ++ ++E +V T++ + GL
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGL 435
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 33/269 (12%)
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
H+ ++N+LL L K ++E +F +PD+ +YN VI FC + D +A
Sbjct: 75 HTAFSWNSLLQVLVRCKKHREAGDLF-RSELLASCEPDVCSYNIVISGFCNAGDLHAALE 133
Query: 203 ILAEMDRK--------------------------------SIKPNASSFGALVAGFYKEE 230
+L EM PN ++ AL+A F + +
Sbjct: 134 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAK 193
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K E+ K+L+ M G + YNV + +LCKL A+ ++ +M+ G PN +T++
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ GFCK GN ++A+K IM G+ PN Y ++ +CK + A +E +
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G P+ T +L+ GL A K+ EA++++
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQML 342
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 2/258 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A +EM + ++AL+ L A +E +++ + G PD+ Y+ +
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSI 360
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG- 246
I AFC+S A L EM ++ P+ ++ ++ G K K + +L+ M+ G
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V Y+ I+ LCK EA+ LLD M G P+ VTY+ I G CK G EEA+
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M +G +PN Y T++ +CK + A +E G PN T ++V GL
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540
Query: 367 AGASKVSEAKELIGLVKE 384
+ ++ EA++L+ +K+
Sbjct: 541 CVSGRIKEAQQLVQRMKD 558
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 6/275 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
+++LE + +TP D +S I+ L +A+ Q L + + ++
Sbjct: 304 KEVLEEMKTRGVTP----DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I + ++ A +T +EM + + V +N ++ L E + + + ++
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ PD+ TY+ VI C+S A +L M + P+ ++ ++ G K + E+
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+LQ M+R G V Y I LCK RK EA+ +++EM + G PN VTY+ + G
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 296 FCKDGNFEEAKKFYRIMSN--SGLSPNSSVYFTMV 328
C G +EA++ + M + + SP+++ Y T+V
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 574
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 83/219 (37%), Gaps = 33/219 (15%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
A S+ +L+ + +K+ + + + + V YN+ I C A LL
Sbjct: 76 TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135
Query: 275 DEMLSKGM--------------------------------KPNSVTYSHFIYGFCKDGNF 302
+EM S G PN VTY+ I F +
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKL 195
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EEA K M G PN Y +V +CK A K+ I G+ PN T SL
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V G V +A++L+G +V + NV T++ + GL
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 163/348 (46%), Gaps = 2/348 (0%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L+ S+++ +EI A+ P + I KL A F + +++++
Sbjct: 106 LIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCP 165
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
I +YG+ M A++ F +M E FN LL+ L K + +
Sbjct: 166 YTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSL 225
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F + + +GI P+ TYN +I+A C S S AY + +M ++ P+ ++ L+ G
Sbjct: 226 FKKLHE-FGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLC 284
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
++ + + VL M G YN ++SLC+ EA LL +M G P+ +
Sbjct: 285 RKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVI 344
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y+ I GFC++G +A + R M +G PN+ Y T+V +C G ++ A F +E
Sbjct: 345 NYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEM 404
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWN 394
I+ G++P+ + L+TGL KV EA E L+ + K+ + TW+
Sbjct: 405 ISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWS 452
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 8/228 (3%)
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
R H HS + HA F +M + V ++ L+ L K V E
Sbjct: 246 RAHCHS-------DKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDE 298
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G PD TYN ++ + C + AY +L++M P+ ++ ++ GF +E
Sbjct: 299 MLNK-GYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREG 357
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ D ++L+ M G Y ++ LC K EAK ++EM+S G P+ Y
Sbjct: 358 RALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYH 417
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
I G C +G EA + +M+ L+P+ S + ++ +C+ E
Sbjct: 418 LLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTE 465
>gi|242041671|ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
gi|241922084|gb|EER95228.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
Length = 396
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 173/339 (51%), Gaps = 6/339 (1%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTR 104
+T + E NP+K++ A + ES + + +A+ +L+ + I+ ++ K
Sbjct: 4 VTAIFRERNPDKLVSRFIAKSTASESFRNEHRVYEVAVARLASFGRHDAIAAIIDSQKPF 63
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMD-EHKLRHSVGAFNALLLALTIAKDYKE 163
+ F A I L G+A+M HA F ++ +HK S+ FNALL A D+
Sbjct: 64 IKASSVGFAARLIRLCGRASMPSHAAAIFHDLPPKHK---SIMTFNALLATYVDASDFDA 120
Query: 164 VKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+ F + ++ I P + +Y+ +I A C+ + S+A ++ M+++ + P+ F +
Sbjct: 121 LAIAFQQILASHPTIVPTVYSYSILISALCQKRELSAALDVITLMEKRGVSPDNIFFNIV 180
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GFY+ + ++D KV ++M+ ++ YN ++ L + +A AL++ M +G
Sbjct: 181 LNGFYRNDSFDDAEKVWEIMKERNIEPDAKCYNAKLRGLISQGRVEDAVALIERMQKEGP 240
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+SV+Y+ I G+CK+G +AKK Y + + +PN + T+V + + + AL
Sbjct: 241 KPDSVSYNELIRGYCKEGRLNQAKKVYDDLIKNECAPNRGTFHTLVPHFVEARELDCALS 300
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
C E + + ++ +VT L AS++ EA+ ++ L
Sbjct: 301 CCHEIFRRKCRVQCSLLQGVVTALIAASRMEEARRIVQL 339
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 5/267 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
++EM + K+ +V +FN ++ L V IE K +G+ P++ TYN +I +
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV-IEDMKVWGVSPNVITYNTLIDGY 200
Query: 192 CESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ Y +IL EM K I PN ++ L+ GF K+E +V M+R G++
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN+ I+ LC K EA AL D+M+S ++PN VT++ I GFCK+ EA
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G+ PN+ Y T++ CK G E A I +G P +T L+ GL
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWN 394
V A+ L+ +V +K + +V T+N
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVTYN 407
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 7/277 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+R F EM LR +V +N L+ L E + + + ++P++ T+N +I
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS-DLEPNVVTHNVLI 305
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ + A ++ +M+++ + PNA ++ L+ + K+ + ED + MM G+
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
VS YN I LC+ A++L++EM+SK + + VTY+ I CK G +A K
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL+P+ Y T++ C+ G+ AL KG N T L+ G
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485
Query: 369 ASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
++ +A L+ GLV + T + +E G
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 136/306 (44%), Gaps = 11/306 (3%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERF 112
+ IL+ A + P + + ++I I+ + +G + E++ RP++
Sbjct: 213 DAILKEMVAKGICP----NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ + G+ + AV +M L +V N L+ K E +F +
Sbjct: 269 LINGLCSDGK---VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ P+ TY +I A+C+ A+++ M + I P S++ L+AG ++
Sbjct: 326 KQ-GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ ++ M + + V YN+ I SLCK + +A LLDEM KG+ P+ VTY+
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G+C++GN A M G N + ++ C G E A G E + +G
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGL 504
Query: 353 VPNFTT 358
VPN TT
Sbjct: 505 VPNRTT 510
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRV---FIEFPKTYGIKPDLDTYNRVIKAFCES 194
E KL HS+ +L +L K Y +++ F+++ K Y + + A S
Sbjct: 25 EFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSA-------IFHAISMS 77
Query: 195 SDSSSAYSILAEMDRKSIKPN------------ASSFG---------ALVAGFYKEEKYE 233
DS SILA+M + N A +G L++G KE +
Sbjct: 78 GDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENG 137
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
D+ V + M + ++ V +N+ ++ LCK+ K A ++++M G+ PN +TY+ I
Sbjct: 138 DMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLI 197
Query: 294 YGFCKDGNFE---EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
G+CK G +A + M G+ PN Y ++ CK + A+ E +
Sbjct: 198 DGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ 257
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
G PN T L+ GL KV EA L +V NV T N + G
Sbjct: 258 GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307
>gi|357131120|ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Brachypodium distachyon]
Length = 463
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 180/343 (52%), Gaps = 7/343 (2%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDR-LAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L E +PEK++ AA+ DR + +A+++L+ + I L K +
Sbjct: 83 LLRERDPEKLVSDFVAASSASARFRDRHRVYEMAVSRLASLGRQDSIETILGAQKRFLET 142
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
E F I LYG+A M A TF E+ +L+ ++ NA+L A AK++ +
Sbjct: 143 SKEGFATRLIGLYGRAAMPAQASATFHELP-AQLKCTM-TLNAVLTAYYQAKEFDALATA 200
Query: 168 FIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
F E ++ + P + +YN +I+A C+ D S+A +++ M++ + P+ SF L+ GF
Sbjct: 201 FQEISVSHPLVVPSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDNISFNTLLNGF 260
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
Y+ + +D V +MM+ + ++ YN ++ L + +A A+++ M +G KP++
Sbjct: 261 YQNGRMDDAEAVWEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDT 320
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V+Y+ I G+C G E+AKK Y + + +PN Y T++ + + G+ + A+ +C
Sbjct: 321 VSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNRGTYETLLPRLLQAGELDCAVRYCHG 380
Query: 347 SIA---KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ K + + ++ +VT L AS+V EA +++ L ++K+
Sbjct: 381 LLSPNTKNCRVDRSLLQDVVTTLVEASRVDEAAKIVELGRKKY 423
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+KEM + ++ ++ FN + L A + + IE K +GI P++ TYN ++ +
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDA-IEDMKAWGISPNVVTYNTLVDGY 245
Query: 192 CESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + Y + + EM I PN +F L+ GF K+E K + M++ G+K
Sbjct: 246 CKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LC K EA L D+M+ G+KPN VTY+ I GFCK +EA K
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +S L PN + TM+ CK G E C + +G +PN +T L+ GL
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ AKEL+ ++ K K +V T+N + GL
Sbjct: 426 KQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ + +M L+ ++ +NAL+ K KE +VF + K + P++ T+N
Sbjct: 325 EEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV-PNVITFNT 383
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I A+C+ +S+ + M + I PN S++ L+AG +++ + ++L ME G
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V YN+ I LCK K A+ LL+EM + G+KPN VTY+ + G+C +G + A
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
M PN Y ++ CK E A G E + KG PN TT
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 160/386 (41%), Gaps = 9/386 (2%)
Query: 18 HHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLA 77
H Y A + G K LTS + +AL + N +E + H +
Sbjct: 147 HCAYEAFTRAKDYGFKLSLTSCNPLLSALV----KENKIGDVEYVYKEMIKRRIHTNLNT 202
Query: 78 FSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
F+I IN L A N +E++K P++ G A A K
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM +K+ + FN L+ ++ K+ F E K G+KP++ TYN +I C +
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ-GLKPNIVTYNSLINGLCNN 321
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A + +M +KPN ++ AL+ GF K++ ++ KV + + + V +
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I + CK E +L ML +G+ PN TY+ I G C+ + + AK+ M N
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
GL + Y ++ +CK A E G PN T +L+ G K+
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKA 501
Query: 375 AKEL-IGLVKEKFTKNVDTWNEIEAG 399
A + + KE+ NV T+N + G
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKG 527
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 21/295 (7%)
Query: 126 TEHAVRTFK-EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--------- 175
+E +R FK E++L + + + +L L +K Y +V+ F K
Sbjct: 58 SELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFH 117
Query: 176 -----GIKPDLDTY--NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
G +P + ++ A+ ++ + AY K + +S L++ K
Sbjct: 118 SLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVK 177
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K DV V + M + + + ++ +N+ I+ LC+ K +A+ +++M + G+ PN VT
Sbjct: 178 ENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVT 237
Query: 289 YSHFIYGFCKDGN---FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
Y+ + G+CK G+ +A+ F + M + + PN + T++ CK + A +
Sbjct: 238 YNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFE 297
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
E +G PN T SL+ GL K+ EA +L +V N+ T+N + G
Sbjct: 298 EMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A EM+ L+ V +N L+ L + +++ E G+KP+ TYN
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM-FNLGLKPNHVTYNT 488
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C +A ++ M+++ +PN ++ L+ G+ K K E N +L M G
Sbjct: 489 LMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548
Query: 247 MKSGVSMYN-VRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + Y+ VR+ EML KG P+
Sbjct: 549 LNPNRTTYDIVRL-----------------EMLEKGFSPD 571
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 179/394 (45%), Gaps = 42/394 (10%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
+LK + +P K LE+ L + I KL F + L E TR D+
Sbjct: 13 VLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAE--TRMDI 70
Query: 108 QN---ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
N E + ++ YG+ + AV F+ MD + SV ++NA++ L + +K+
Sbjct: 71 DNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQA 130
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+VF+ K GI PD+ T+ IK+FC + SA +L M + + NA ++ +VA
Sbjct: 131 HKVFLRM-KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVA 189
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM-- 282
GFY+E + ++ M R G+ VS +N +H+LCK + E++ LL+++L KGM
Sbjct: 190 GFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS 249
Query: 283 ---------------------------------KPNSVTYSHFIYGFCKDGNFEEAKKFY 309
P+ VTY+ I G CK+ N EA+K+
Sbjct: 250 NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL 309
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ N GL P+ Y T++ CK G + A + +I KG+VP+ T SL+ GL
Sbjct: 310 HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN 369
Query: 370 SKVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
++ A L K K V +N + GL Q
Sbjct: 370 DEIDRALALFNAALGKGLKPTVILYNMLIKGLCQ 403
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 44/307 (14%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
++ILY Q + A++ EM E+ + +N ++ L + +
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ G PD+ T+N +I +C+ + IL +M + P+ ++ +++ G K
Sbjct: 450 ND-AIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K ED+ + + M G YN+ SLCK K EA L+DE+L+KG+ P++V+
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568
Query: 289 YSHFIYGFCKDGNFEEAKKFYR----------------IMSNS----------------- 315
++ I GF +G+ + A + +R IM N+
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEM 628
Query: 316 ---GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G +P++ Y M+ C G+ ++ F E I KG++P+ TT ++ L +V
Sbjct: 629 GAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRV 688
Query: 373 SEAKELI 379
EA ++I
Sbjct: 689 HEAVDII 695
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN +I C++S+ A L ++ ++P+ ++ L+ G+ K ++
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+LQ G Y I+ LC+ + A AL + L KG+KP + Y+ I G
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G +A + MS +G S + Y ++ +CK G A ++IAKG+VP+
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G K+ +++ + T +V T+N + GL +
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 147/334 (44%), Gaps = 18/334 (5%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
L+++ +N L E+ YF + +K PD+ S + + A+R
Sbjct: 112 LSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKS---FCRTKRPHSALRL 168
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRV 187
M + NA+ +A Y+E RV F + + GI PD+ T+N++
Sbjct: 169 LNNMVSQGCQ-----LNAVAYCTVVAGFYEENYRVEAYELFNDMLRI-GIFPDVSTFNKL 222
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ C+ + + +L ++ +K + N +F + G ++ +L + R G+
Sbjct: 223 LHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL 282
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V YN I LCK EA+ L ++++ G++P+ TY+ I G+CK G + A+K
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ G P+ Y +++ +C+ + + AL ++ KG P L+ GL
Sbjct: 343 ILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402
Query: 368 GASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ +A +++ + E + ++ T+N + GL
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C++ + A ++ K +KP + L+ G +E
Sbjct: 351 GFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQA 410
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G S + YN+ I+ LCK+ ++A L+++ ++KG P+ T++ I G
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDG 470
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK E + M + G++P+ Y +++ + K E + + + KG VPN
Sbjct: 471 YCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPN 530
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L L A KV+EA +L+
Sbjct: 531 KITYNILTESLCKAGKVNEALDLV 554
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP + YN +IK C+ A ++ EM + ++ ++ G K D
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N ++ G V +N I CK K +L++M S G+ P+ +TY+ + G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K E+ + + M G PN Y + +CK G AL E + KG P+
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ ++++G A + A +L + E++
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E ++ +M H + V +N++L L+ A +++ F E G P+ TYN
Sbjct: 478 ETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETF-ETMVEKGCVPNKITYNI 536
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM-ERY 245
+ ++ C++ + A ++ E+ K I P+ SF +++GF + ++ + M E+Y
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN+ I++ + + L EM + G P++ TY I GFC GN +
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
KF M G P+ + + ++ +C A+ + G VP
Sbjct: 657 YKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 11/242 (4%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
LK E+ + IL + +TP D + ++ +N LS+A + + E + + +
Sbjct: 475 LKMETTIQ-ILNKMWSHGVTP----DVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVP 529
Query: 109 NE---RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
N+ S+ G+ N A+ E+ + +F ++ D K
Sbjct: 530 NKITYNILTESLCKAGKVN---EALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAY 586
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F + Y + TYN +I AF E D + EM P+ ++ ++ G
Sbjct: 587 QLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDG 646
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
F + K L M G ++ + I+ LC + EA ++ M+ G+ P
Sbjct: 647 FCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706
Query: 286 SV 287
V
Sbjct: 707 VV 708
>gi|357131125|ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 457
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 179/343 (52%), Gaps = 7/343 (2%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDR-LAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L E +PEK++ AA+ DR + +A+++L+ + I L K +
Sbjct: 76 LLRERDPEKLVSDFVAASSASARFRDRHRVYEVAVSRLASFGRQDSIETLLGAQKRFLET 135
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
E F I LYG+A M A TF E+ +L+ ++ FNA+L A + AK++ +
Sbjct: 136 SKEGFATRLIGLYGRAAMPAQAAATFHEL-PAQLKCTM-TFNAVLTAYSRAKEFDALATA 193
Query: 168 FIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
F E P ++ + P + +YN +I A C+ S+A +++ M++ + P+ SF L+ GF
Sbjct: 194 FQEIPASHPLVVPSVYSYNILISALCQKPALSAALNVVTLMEKCGVLPDNISFNTLLNGF 253
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + +D V +MM+ ++ YN ++ L + +A A+++ M +G KP++
Sbjct: 254 SKNGRVDDAEAVWEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDT 313
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V+Y+ I G+C G E+AKK Y + + +PN Y T++ + + G+ + AL +C E
Sbjct: 314 VSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNKGTYETLLPRLLQAGELDCALRYCHE 373
Query: 347 ---SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
S K + + ++ +VT L AS+V EA +++ L ++K+
Sbjct: 374 LFSSNIKSCRVDCSLLQDVVTTLVEASRVDEAAKIVELGRKKY 416
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 154/307 (50%), Gaps = 6/307 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ LEE+K+ + H I A + A+ + M +V + AL+ A
Sbjct: 11 ELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALIAAF 67
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
AK +E ++ E + G P+L TYN ++ A C+ S +A ++ +M PN
Sbjct: 68 ARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+F +LV GF K +D K+L +M GM+ V Y+ I LCK +K EAK +L+
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM + G+ P++ TYS I+G CK EEA++ R M+ SG +P+ VY ++++ CK G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE--KFTKNVDTW 393
A +E + P+ T +++ GL K++EA+ ++ ++E +V T+
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306
Query: 394 NEIEAGL 400
+ + GL
Sbjct: 307 STVINGL 313
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 2/258 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A +EM + ++AL+ L A +E +++ + G PD+ Y+ +
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSI 238
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG- 246
I AFC+S A L EM ++ P+ ++ ++ G K K + +L M+ G
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V Y+ I+ LCK EA+ LLD M G P+ VTY+ I G CK G EEA+
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M +G +PN Y T++ +CK + A +E G PN T ++V GL
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 418
Query: 367 AGASKVSEAKELIGLVKE 384
+ ++ EA++L+ +K+
Sbjct: 419 CVSGRIKEAQQLVQRMKD 436
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 6/275 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
+++LE +A+ +TP D +S I+ L +A+ Q L + + ++
Sbjct: 182 KEVLEEMKASGVTP----DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I + ++ A +T +EM + + V +N ++ L E + + + ++
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ PD+ TY+ VI C+S A +L M + P+ ++ ++ G K + E+
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+LQ M+R G V Y I LCK RK EA+ +++EM + G PN VTY+ + G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 296 FCKDGNFEEAKKFYRIMSN--SGLSPNSSVYFTMV 328
C G +EA++ + M + + SP+++ Y T+V
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 153/294 (52%), Gaps = 8/294 (2%)
Query: 114 AHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+SI++ Y + E A + F+EM E + V +++++ + ++ +KR F F
Sbjct: 289 TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMI---SWSRRLGNMKRAFALF 345
Query: 172 PKT--YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+ I P+ TY +I C++ +A +L EM K + N F + G+ +
Sbjct: 346 DEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRR 405
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
K ++ ++ +ME+ G+ + V YN+ + LCKL + EAK +L+ M+ KG+KPN VT+
Sbjct: 406 GKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTF 465
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ FI +CK+GN EA++ +R M G PN Y T++ CK + A E I
Sbjct: 466 TMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMIN 525
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
KG +P+ T SL+ G +V EA +L ++ K T+NV T+ + +GL +
Sbjct: 526 KGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSK 579
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 2/270 (0%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ VR F M E +K V + ++ L + ++ K + E +KP++ TY
Sbjct: 196 VDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTY 255
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ A+ D IL M+++ + + +++ L+ + E+ K+ + M
Sbjct: 256 NTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMRE 315
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
++ V +Y+ I +L A AL DEM + + PN+ TY I G CK G E
Sbjct: 316 KNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEA 375
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A+ M + G+ N ++ T + C+ G + AL KG + T L
Sbjct: 376 AEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILAN 435
Query: 365 GLAGASKVSEAKELIGLVKEKFTK-NVDTW 393
GL + EAK ++ + EK K NV T+
Sbjct: 436 GLCKLHRYDEAKCILNSMVEKGVKPNVVTF 465
>gi|226501132|ref|NP_001144243.1| hypothetical protein [Zea mays]
gi|195638968|gb|ACG38952.1| hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 190/404 (47%), Gaps = 19/404 (4%)
Query: 12 NLFSQKHH--RYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTP 69
+L S++H R L+T + L + T D +R ++ + + P+ + + + P
Sbjct: 13 SLLSRRHLLIRLLSTQTQLVTPPTP-TTPADLSRLKSSIRDAATTPDALATLFLSGLPHP 71
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQ-NERFHAHSIILYGQANMTE 127
DR F++++++L+ A + ++ L L P +E F I LY A M +
Sbjct: 72 AFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPD 131
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
H++ F+ + R A +ALL A + Y R F P GIKP L ++N +
Sbjct: 132 HSLAVFRLVKPASDR----ALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVL 187
Query: 188 IKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM--ER 244
+KA S D ++A+++ EM D ++P+ S ++ G+ + +++++ + +
Sbjct: 188 LKALVASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPK 247
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+K V YN+R+ LC + EA+ LLD M + G+ PN +++ I G C +G
Sbjct: 248 RRLKPNVGTYNLRMALLCSKMRSFEAEELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGA 307
Query: 305 AKKFYRIMS------NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
A ++ M G+SPN Y ++ + K ++ AL CKE + W P F
Sbjct: 308 AMALFKRMPEVPRQHGKGVSPNFETYIMLLEALVKKNLFDPALEICKECLRNKWAPPFQA 367
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNV-DTWNEIEAGLP 401
+K LV GL + K A+E+ +++ + W ++EA P
Sbjct: 368 VKGLVQGLLKSRKAKHAREVFMAMRKAVKGDAKQEWIKVEAQFP 411
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 151/319 (47%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
I+KLS A F + L +L E + I YG A + A+RTF + + +
Sbjct: 102 IHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNV 161
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ SV + N LL A K Y V +F YG+ P++ T N +IKA C+ +D SA
Sbjct: 162 QRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAV 221
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM + PN ++ ++ G+ + NKV + G + Y + ++
Sbjct: 222 KVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGY 281
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C+ + A+A L+D+M G++PN VTY + +CK+ EA+ M P+S
Sbjct: 282 CEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSS 341
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++ ++ +C+ G E A K + K +P+ M +L+ L KV EA++L G
Sbjct: 342 ALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGE 401
Query: 382 VKEKFTKNVDTWNEIEAGL 400
+ ++ T+N + AG+
Sbjct: 402 FERGAIPSLLTYNTLIAGM 420
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 37/306 (12%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N E AV+ EM + +V + +L + D +VF E G PD T
Sbjct: 215 NDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGEL-FDRGWLPDATT 273
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MM 242
Y ++ +CE + A ++ +M ++PN ++G +V + KE+K + +L M+
Sbjct: 274 YTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDML 333
Query: 243 ERYGMKSGV----------------------------------SMYNVRIHSLCKLRKCA 268
ER + S ++ + IH LCK K
Sbjct: 334 ERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVW 393
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA+ L E +G P+ +TY+ I G C+ G EA K + M G PN+ Y ++
Sbjct: 394 EARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLI 452
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
K G+ + + +E + +PN +T L+ L E +++ +
Sbjct: 453 KGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGV 512
Query: 389 NVDTWN 394
+ D+W+
Sbjct: 513 DSDSWD 518
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A++ +M E+ + + + ++ A K E + + + + + P
Sbjct: 281 YCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYV-P 339
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+VI CE+ A + M +K+ P+ + L+ KE K + K+
Sbjct: 340 SSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLF 399
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ER + S ++ YN I +C+ + +EA L D+M+ KG KPN+ TY+ I GF K
Sbjct: 400 GEFERGAIPSLLT-YNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKI 458
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
GN +E + M ++ PN S Y ++ +CK G
Sbjct: 459 GNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMG 494
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 2/184 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L+++ R + + I + +A E A +K M + + L+ L
Sbjct: 329 LDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCK 388
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E +++F EF + G P L TYN +I CE + S A + +M K KPNA
Sbjct: 389 EGKVWEARKLFGEFER--GAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAF 446
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ GF K ++ ++L+ M S Y + I LCK+ E ++
Sbjct: 447 TYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMA 506
Query: 278 LSKG 281
++ G
Sbjct: 507 MASG 510
>gi|357138274|ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 23/345 (6%)
Query: 74 DRLAFSIAINKLSEAN----YFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
DR FS+A+ +L+ A F+ +S L L +E F I LY A M +H+
Sbjct: 79 DRPIFSLAVTRLASAGRRDLVFSILSSSLTALPA--PHPSEGFLIRLISLYAAAGMPQHS 136
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ TF+ + R F+ALL A + F + P +P + ++N ++K
Sbjct: 137 LSTFRLVKPATDR----VFSALLAAYHDTAQHDLAVTAFRDLPAELSFQPGVVSHNVLLK 192
Query: 190 AFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME--RYG 246
+ + D + A + EM D+ ++P+ S ++ G+ K Y +++ + + +
Sbjct: 193 SMVATGDVAGARQVFDEMADKAGVQPDIVSCNEVLRGYLKTADYAAFDQLFKEIAGGKRR 252
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V+ YN+R+ +LC + EA+ LLD M + G+ PN +++ I G CK+G A
Sbjct: 253 LKPNVTTYNLRMAALCAKGRSFEAEELLDVMGANGVPPNRESFNTVIGGLCKEGEVGAAA 312
Query: 307 KFYRIM------SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++ M + G+SPN Y ++ + + + AL CKE +A W P F +K
Sbjct: 313 ALFKRMPEVPRPNGKGVSPNFETYIMLLEALVEKRVFSPALEVCKECLANKWAPPFQAVK 372
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTKN--VDTWNEIEAGL-PQ 402
L+ GL + KV +AKEL G+ K TK W +E+ + PQ
Sbjct: 373 GLIQGLVKSRKVKQAKEL-GMAMRKATKGDAKAEWENVESAIFPQ 416
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N T +KEM + +++ ++ FN + L A + + V IE K +G P++
Sbjct: 177 KGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDV-IEDIKAWGFSPNI 235
Query: 182 DTYNRVIKAFCESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
TYN +I C+ + Y +IL EM I PN +F L+ GF K+E
Sbjct: 236 VTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNA 295
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+R G+K + YN I+ L K EA AL D+M+ G+KPN VT++ I GFCK
Sbjct: 296 FEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCK 355
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+EA+K + ++ L PN+ + TM+ CK G E + +G PN +T
Sbjct: 356 KKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
L+ GL V AK+L+ ++ + +V T+N + G
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGG 457
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ + +M L+ ++ FNAL+ K KE +++F + + + P+ T+N
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQ-DLVPNAITFNT 383
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I AFC++ +++ M + I PN S++ L+AG + + K+L ME Y
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K+ V YN+ I CK + ++A+ LL EML+ G+KPN VTY+ + G+C +GN + A
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
K M G N Y ++ CK G E A E + KG PN TT
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F+EM L+ ++ +N+L+ L+ E ++ + G+KP++ T+N +I
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV-GLGLKPNIVTFNALI 350
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ A + ++ + + PNA +F ++ F K E+ + M G+
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
VS YN I LC+ + AK LL+EM + +K + VTY+ I G+CKDG +A+K
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M N G+ PN Y T++ C G+ + AL + +G N T L+ G
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530
Query: 369 ASKVSEAKELIGLVKEK 385
K+ +A L+ + EK
Sbjct: 531 TGKLEDANRLLNEMLEK 547
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P+ T+N +I FC+ + +A + EM R+ +KPN ++ +L+ G K ++
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M G+K + +N I+ CK + EA+ L D++ + + PN++T++ I F
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G EE + M + G+ PN S Y ++ +C+ + A E +
Sbjct: 389 CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADV 448
Query: 357 TTMKSLVTGLAGASKVSEAKELIG 380
T L+ G + S+A++L+G
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLG 472
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A M E M + + +V +N L+ L ++ + K++ E + Y +K
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM-ENYELKA 446
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I +C+ + S A +L EM +KPN ++ L+ G+ E + KV
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
ME+ G ++ V YNV I CK K +A LL+EML KG+ PN TY
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
SS +S+L DR NA LV + + +V + ++ YG K ++ N
Sbjct: 113 SSVFHSLLLGGDRPC--ANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNP 170
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ +L K + E + + EM+ + ++PN T++ FI G CK G +A+ + G
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230
Query: 317 LSPNSSVYFTMVYFMCK---GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SPN Y T++ CK G A KE +A PN T +L+ G V
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL 290
Query: 374 EAKELI-GLVKEKFTKNVDTWNEIEAGL 400
AK + ++ N+ T+N + GL
Sbjct: 291 AAKNAFEEMQRQGLKPNIVTYNSLINGL 318
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + EM+ ++L+ V +N L+ + + +++ E G+KP+ TYN ++
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV-GVKPNHVTYNTLM 490
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + +A + +M+++ + N ++ L+ GF K K ED N++L M G+
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550
Query: 249 SGVSMYNV 256
+ Y+V
Sbjct: 551 PNRTTYDV 558
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 184/395 (46%), Gaps = 14/395 (3%)
Query: 15 SQKHHRYLATSSILSSGDKTPLTSKDKTRAALTL---LKSESNPEKILEICRAAALTPES 71
S HH A S S+ +P T + L L+ +S+ + IL++ A+ P
Sbjct: 42 STHHHDQQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNF 101
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK-TRPDLQNERFHAHSIIL---YGQANMTE 127
+ + + KL + F + + L+E+K T +++ F +IL Y + + +
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTF----LILIESYAKFELFD 157
Query: 128 HAVRTFKEMDEH-KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
AV M+E L+ +N LL L K V+ V + GIKPD+ T+N
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRM-VSRGIKPDVTTFNI 216
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IKA C + A ++ EM + P+ +F L+ GF +E ++ + M G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
S NV +H CK + E + +DEM ++G +P+ T++ + G C+ G+ + A
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +M G P+ Y ++++ +CK G+ E A+ + I + + PN T +L++ L
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396
Query: 367 AGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++V EA EL ++ K +V T+N + GL
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 431
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N E A + + + V FN+L+ L + +++ +F E KT G PD T
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM-KTKGCHPDEFT 458
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I + C A S+L EM+ N ++ L+ GF K ++ E+ ++ ME
Sbjct: 459 YNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME 518
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ V YN I LCK R+ EA L+D+ML +G+KP+ TY+ + FC+ G+ +
Sbjct: 519 LQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIK 578
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M+++G P+S Y T++ + K G E A + KG V T ++
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVI 638
Query: 364 TGLAGASKVSEAKELIGLVKEK 385
L + SEA L + EK
Sbjct: 639 KALFREKRTSEAVRLFREMMEK 660
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 7/276 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E + EM R FN+L+ L K + ++ G P
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEI-LDVMLQEGFDP 349
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I C+ + A IL +M + PN ++ L++ KE + E+ ++
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELA 409
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+++ G+ V +N I LC A L +EM +KG P+ TY+ I C
Sbjct: 410 RVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EEA + M +SG S N Y T++ CK E A E +G N T
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+L+ GL +V EA +L+ GL +KFT N
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 6/277 (2%)
Query: 104 RPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
RPD RF +S++ + +HA+ M + + +N+L+ L + +
Sbjct: 313 RPD----RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + + P+ TYN +I C+ + A + + K I P+ +F +L
Sbjct: 369 EAVEILNQM-ILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 427
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G + ++ + M+ G YN+ I SLC + EA +LL EM S G
Sbjct: 428 IQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
N VTY+ I GFCK+ EEA++ + M G+S N Y T++ +CK E A
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + +G P+ T SL+T A + +A +++
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIV 584
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 1/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ IN L + + + + ++++ R N + + + + + AV
Sbjct: 113 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 172
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M E R + +N ++ L + ++F E ++ PD+ TY+ ++ + +
Sbjct: 173 RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK 232
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A ++ M K PN ++ +L+ G K K ++ +LQ M R G +
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I CKL + EA LL+EM+ G +PN VTY+ + FCK G E+A +M
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G PN Y +++ CK + E A I KG VPN + +++ GL A+KV
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 374 EAKELI-GLVKEKFTKNVDTWNEI 396
E L+ ++ ++ T+N I
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTI 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+ L+ G ++L L A + F E KT PD TYN +I +S
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMINGLSKSD 58
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L EM PN S+ ++ GF K + E+ +L+ M G V Y
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I+ LCKL + EA ++D+M+ +G +PN +TY + GFC+ G+ + A + R M+
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKVSE 374
G PN+ Y +++ +C G ++AL KE G P+ T ++V L + KV +
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 375 AKELI-GLVKEKFTKNVDTWNEIEAGL 400
A L+ +V + + NV T++ + GL
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGL 265
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 144/313 (46%), Gaps = 16/313 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D +S ++ L ++ + + +E + ++ N +S +L+G +A + A
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN--VVTYSSLLHGLCKAGKLDEATA 276
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNR 186
+ M ++ +N TI + ++ R+ +E G +P++ TY
Sbjct: 277 LLQRMTRSGCSPNIVTYN------TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ AFC+ + A ++ M K PN ++ +L+ F K+++ E ++L M + G
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V YN I LCK K E LL++MLS P+ VT++ I CK + A
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMKSLVTG 365
+ + ++ SG +PN Y ++V+ +CK ++ A +E K G P+ T +++ G
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 510
Query: 366 LAGASKVSEAKEL 378
L + +V A +L
Sbjct: 511 LCKSKRVDRAYKL 523
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + E ++ +N+L+ L ++ + + + + E + G PD+ TYN VI
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+S AY + +M + P+ ++ +++ K ++ N VL++M + G
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
G Y I CK +A +L +LSKG P+ VT+S FI K G +A +
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M +GL P++ Y T++ C E A+ + G P+ T +LV L
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 687
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 14/311 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL------YGQANMTEHA 129
L++ + I+KL A F+ + + L++LK Q RF H +I YG+A++ + A
Sbjct: 116 LSYDLIISKLGRAKMFDEMEEILQQLK-----QETRFAPHEVIFCNVIAFYGRAHLPDRA 170
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ F+ + + + +V + N+LL AL + +++ +VF++ YG PD T+N +I
Sbjct: 171 FQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDI-SNYG-SPDACTFNILIH 228
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMK 248
A C D + + + EM ++ +KPN +FG L+ G K ++ ++ + M++ Y +K
Sbjct: 229 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIK 288
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
S+Y I C + + A L +EM++ +K S YS I K G EE
Sbjct: 289 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDI 348
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M +G P++ Y ++ CK D E+A E + KG P+ + +++ L
Sbjct: 349 LREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCK 408
Query: 369 ASKVSEAKELI 379
K+ +A +L+
Sbjct: 409 EGKLDKAMDLL 419
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 157/386 (40%), Gaps = 36/386 (9%)
Query: 40 DKTRAALTLLKSESN--PEKILEICRAAALTPESHLDRLAFSI--------------AIN 83
D+ L LK E+ P +++ C A +HL AF + ++N
Sbjct: 132 DEMEEILQQLKQETRFAPHEVI-FCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVN 190
Query: 84 KLSEA-----------NYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
L A F IS Y PD H+ L G +
Sbjct: 191 SLLAALLKNRQLEKMTQVFVDISNY-----GSPDACTFNILIHAACLCGDLDAVWGV--- 242
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + ++ +V F L+ L++ KE R+ + K Y IKP+ Y +IK FC
Sbjct: 243 FDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFC 302
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A+ + EM ++K ++ + L++ +K + E+V+ +L+ M G K
Sbjct: 303 GVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTV 362
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I+ CK A ++DEM+ KG KP+ +++ I CK+G ++A M
Sbjct: 363 TYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDM 422
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G P+ Y + +C+ + A E I KG+VP ++ LV L +
Sbjct: 423 PRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNM 482
Query: 373 SEAKELIGLVKEKFTKNVDTWNEIEA 398
++ + N+D W + A
Sbjct: 483 ELLWMILNSLGRGNRMNMDMWARVVA 508
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 3/284 (1%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I+++G +A A KEM H + +V N ++ L A+ +F E +
Sbjct: 881 TILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEE 940
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ PD+ TY+ ++ + +S A ++ +M K PN ++ +L+ G K K +
Sbjct: 941 SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ +LQ M R G + YN I CKL + EA LL+EM+ G +PN VTY+ +
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 1060
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
FCK G E+A +M G PN Y +++ CK + E A I KG V
Sbjct: 1061 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 1120
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
PN + +++ GL A+KV E L+ ++ ++ T+N I
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 1164
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM+ L+ G ++L L A + F E KT PD TYN +I
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMI 237
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+S A +L EM PN S+ ++ GF K + E+ +L+ M G
Sbjct: 238 NGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCP 297
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y I+ LCKL + EA ++D+M+ +G +PN +TY + GFC+ G+ + A +
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M+ G PN+ Y +++ C+ D E A + I G P+ ++++G
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417
Query: 369 ASKVSEAKELI 379
A K+ EA +L+
Sbjct: 418 AGKLREAHDLL 428
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 150/347 (43%), Gaps = 36/347 (10%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ IN L + + + + ++++ R N + + + + + AV
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M E R + +N ++ D + +V +T G PD Y+ +I FC+
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT-GCPPDAINYSTIISGFCK 417
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A+ +L +M R+ +P+ + L+ K + ++L+M V
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477
Query: 254 YNVRIHSLCKLRKCAEAKALLDEML----------------------------------- 278
Y++ IH+LCK ++ EA++ LD M+
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ G+ P+ VTYS I+ FCKD N + A K M + P+ Y ++ +CK G +
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
A +E + G PN T +L+ GL +KV +A E++ +++++
Sbjct: 598 KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 132/268 (49%), Gaps = 4/268 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
H IL G A AV F+EM + SV +N ++ L+ + + R+ E
Sbjct: 198 VHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSDRLDDAIRLLEEM 256
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G P++ +YN V+ FC+++ +A +L +M + P+ S+ ++ G K ++
Sbjct: 257 VDN-GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ +V+ M + G + V Y + C++ A L+ +M +G +PN++TY++
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
++ FC+ + E A + ++M +G P++ Y T++ CK G A ++ I +G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ + +L+ L A+ + A+EL+
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELL 463
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 3/325 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
F+I I+ L A + L+E+ QN H I A + A+ FKEM+
Sbjct: 880 FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939
Query: 138 EH-KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
E V ++ ++ +L + + R +E + G P++ TY+ ++ C++
Sbjct: 940 ESGSCPPDVFTYSTIVDSLVKSGKVDDACR-LVEDMVSKGCSPNVVTYSSLLHGLCKAGK 998
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A ++L M R PN ++ ++ G K + ++ +L+ M G + V Y V
Sbjct: 999 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ + CK K +A L++ M+ KG PN TY+ + FCK E A + M G
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
PN Y T++ +CK + ++ ++ VP+ T +++ + +V A
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 1178
Query: 377 ELIGLVKEK-FTKNVDTWNEIEAGL 400
EL L++E T N+ T+N + GL
Sbjct: 1179 ELFNLIQESGCTPNLVTYNSLVHGL 1203
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+++ + A+R +EM ++ +V ++N +L A + E +E T G PD+
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA-NRVENALWLLEQMVTRGCPPDV 300
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y VI C+ A ++ +M ++ +PN ++G LV GF + + ++++
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G + YN +H C+ A +L M+ G P+++ YS I GFCK G
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA M G P+ + T++ +CK ++A + SI P+
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ L A ++ EA+ + +VK + +V T+N + GL
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 145/313 (46%), Gaps = 16/313 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D +S ++ L ++ + + +E++ ++ N +S +L+G +A + A
Sbjct: 947 DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPN--VVTYSSLLHGLCKAGKLDEATA 1004
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNR 186
+ M ++ +N TI + ++ R+ +E G +P++ TY
Sbjct: 1005 LLQRMTRSGCSPNIVTYN------TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ AFC+ + A ++ M K PN ++ +L+ F K+++ E ++L M + G
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V YN I LCK K E LL++MLS P+ VT++ I CK + A
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 1178
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMKSLVTG 365
+ + ++ SG +PN Y ++V+ +CK ++ A +E K G P+ T +++ G
Sbjct: 1179 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238
Query: 366 LAGASKVSEAKEL 378
L + +V A +L
Sbjct: 1239 LCKSKRVDRAYKL 1251
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 3/287 (1%)
Query: 97 YLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ E +TR Q+E F + ++ + +A+ A F+ E + ++ L+
Sbjct: 112 FFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGF 171
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A +F E + G+K + +++ C++ S A EM K+ P+
Sbjct: 172 IRAGKILPAYELFDEMNRK-GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPD 229
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ++ ++ G K ++ +D ++L+ M G V YN +H CK + A LL+
Sbjct: 230 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 289
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+M+++G P+ V+Y+ I G CK +EA + M G PN Y T+V C+ G
Sbjct: 290 QMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 349
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
D + A+ ++ +G+ PN T +++ + + A +++ ++
Sbjct: 350 DLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 10/324 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ +A LE++ RPD+ ++ + + +
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R MD V A++ L+ AL AK E + +++ PD+ TYN V+
Sbjct: 464 RMSIGMD---CAPDVVAYSILIHALCKAKRLPEAES-WLDVMVKNRCYPDVVTYNSVVDG 519
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+S + A+ + M + P+ ++ ++ F K+ + K+L+ M+
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y+ I+ LCK +A + EML G PN VTY+ I G CK E+A +
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
IM +P+S Y ++ +C E A +E KG +P+ T +L+ L +
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTN 699
Query: 371 KVSEAKELIGLVKEKFTKNVDTWN 394
+ ++L+ KE WN
Sbjct: 700 NLELVEQLL---KEMEATEEGQWN 720
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + E ++ +N+L+ L ++ + + + + E + G PD+ TYN VI
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+S AY + +M + P+ ++ +++ K ++ N VL++M + G
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 1296
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
G Y I CK +A +L +LSKG P+ VT+S FI K G +A +
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M +GL P++ Y T++ C E A+ + G P+ T +LV L
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 1415
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVF-IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+H + N LL L A Y + +F +G D TY+ +I F + A
Sbjct: 123 QHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWG--GDTVTYSTLISGFIRAGKILPA 180
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
Y + EM+RK +K +A +++ G + D + M + V+ YN I+
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVT-YNTMING 239
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
L K + +A LL+EM+ G PN +Y+ ++GFCK E A M G P+
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y T++ +CK + A + I +G PN T +LV G + A EL+
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 381 LVKEK-FTKNVDTWNEI 396
+ E+ + N T+N I
Sbjct: 360 KMTERGYRPNAITYNNI 376
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK------- 266
PN +F L+ G + ++L+ M R+G+ V ++NV I LC RK
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 267 ---------CA--------------------EAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
C +A L+++M+SKG PN VTYS ++G C
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G +EA + M+ SG SPN Y T++ CK G + A +E + G PN
Sbjct: 995 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
T L+ K +A L+ ++ EK + N+ T+N +
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 1094
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 30/240 (12%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD TYN ++K FC++S + A + M + +P+ +++ LV ++ Y+D+
Sbjct: 1364 GLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 1423
Query: 236 -NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA------LLDEMLSKGMKP---- 284
+V + M G K N + S KL E +A + +M K P
Sbjct: 1424 LAEVSKSMVDTGFK-----LNHELSS--KLEASIEVEADVRLGCAIVDMFGKCGSPQDAR 1476
Query: 285 ---------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
N V +S + + E+A +R+M G+ P++ + +++ C G
Sbjct: 1477 KVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAG 1536
Query: 336 DYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
+ A+ F S G P ++ L V+EA++L ++ + TWN
Sbjct: 1537 LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL--MLGMPCKPSAATWN 1594
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 5/333 (1%)
Query: 26 SILSSGDKTPLTSKD--KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAIN 83
S D L KD R L + NPE ++ + + + + + +++ IN
Sbjct: 34 STFPPDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVSKRKDFKPNEALYTLVIN 93
Query: 84 KLSEANYFNGISQYLEELKTRPDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKEMDEHKL 141
KL++A F+ I ++ LK + ++ F + I +YG A + AV T +M +
Sbjct: 94 KLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHC 153
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
SV FN +L L AK + V +V+ P+ G++ D N ++K C S + +A
Sbjct: 154 WPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPE-LGVEIDACCLNILVKGLCRSGNVDAAC 212
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L E ++ +PN +F L+ G + + E +L+ MER G+ ++N+ I L
Sbjct: 213 ELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL 272
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
K + E LL M KG PN+ +Y +YG G F +AK+F M + G+SP+
Sbjct: 273 RKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSF 332
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
Y M+Y +CK + K+ + +G+VP
Sbjct: 333 VSYKMMIYGLCKENLVADVVWILKQMVEQGFVP 365
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 4/263 (1%)
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
S++ G+ + E +KEM ++ +V F+ ++ L +++ V +E K +
Sbjct: 203 SLVKEGRIGVVESV---YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV-VEDMKAW 258
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + TYN +I +C++ A ++L EM K I PN +F L+ GF ++E
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV + M+R G++ V YN I+ LC K EA L D+M G+KPN VTY+ I G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK +EA++ + GL+PN + T++ K G + A + G PN
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
+T L+ G V EA++L
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKL 461
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 2/326 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F + IN L + F +E++K + + I Y +A A KE
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ + FN L+ ++ K+VF E + G++P++ TYN +I C +
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNG 348
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + +M +KPN ++ AL+ GF K++ ++ ++L + + G+ V +N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + K + +A L ML G+ PN TY+ I GFC++GN +EA+K + M +
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL + Y +V +CK G+ A+ E G P+ T +L+ G + A
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAA 528
Query: 376 KELIGLVKEKFTK-NVDTWNEIEAGL 400
+ L+++K + N+ T+N + G
Sbjct: 529 LNVRTLMEKKGRRANIVTYNVLIKGF 554
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG + + N ++ + + S+ EM R+ I N +F ++ G K K++
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
V++ M+ +G V YN I CK K +A ALL EM++K + PN +T++ I
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
GFC+D N AKK + M GL PN Y +++ +C G + ALG + G P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEI 396
N T +L+ G + EA+E++ + K NV T+N +
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 5/289 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHA 129
H + + F+I I+ + EE++ R LQ +S+I L + E A
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQ-RQGLQPNVVTYNSLINGLCSNGKLDE-A 353
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ +M L+ +V +NAL+ K KE + + + K G+ P++ T+N +I
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR-GLAPNVITFNTLID 412
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A+ ++ A+ + + M + PN S++ L+ GF +E ++ K+ + ME G+K+
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ YN+ + +LCK + +A LLDEM G+ P+ +TY+ I G+ ++GN A
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+M G N Y ++ C G E A E + KG +PN TT
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+A + A M + + +V +N L++ + KE +++ E G+K
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-GLKA 472
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TYN ++ A C+ ++ A +L EM + P+ ++ AL+ G+++E V
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ME+ G ++ + YNV I C K EA LL+EML KG+ PN TY
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ + + + A + KEM+ + L+ + +N L+ AL + ++ R+ E + G
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV-G 504
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P TYN +I + +S++A ++ M++K + N ++ L+ GF + K E+ N
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
++L M G+ + Y++ L DEM+ KG P+
Sbjct: 565 RLLNEMLEKGLIPNRTTYDI----------------LRDEMMEKGFIPD 597
>gi|414590555|tpg|DAA41126.1| TPA: hypothetical protein ZEAMMB73_459455 [Zea mays]
Length = 246
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 117/216 (54%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+F E P+ Y ++ + + N V+K FC+ D +AY ++ M+R ++P+ ++ L+A F
Sbjct: 5 LFEEGPEKYDVEVNDISCNTVVKMFCDMGDLRAAYRVMQGMERAGVRPDVITYTTLMAAF 64
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
YK + E + + +M G ++ YNVRI L + +A + +M G+KP+
Sbjct: 65 YKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANEMARKMYVAGIKPDE 124
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+TY+ I GF G E AK + M G PN+ VY TMV+++C+ D++ A CK+
Sbjct: 125 ITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNNKVYQTMVHYICERRDFDLAFRLCKD 184
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ K W P+ T+ L+ GL SK KE++ LV
Sbjct: 185 IMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLV 220
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 4/183 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R + M+ +R V + L+ A +EV + G P L TYN I
Sbjct: 38 AYRVMQGMERAGVRPDVITYTTLMAAFYKC-GRREVGDGLWNLMRLRGCVPTLATYNVRI 96
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ A + +M IKP+ ++ ++ GF+ ++E V M G K
Sbjct: 97 QFLVNRGRGWQANEMARKMYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCK 156
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF---CKDGNFEEA 305
+Y +H +C+ R A L +++ K P+ T + + G KD N +E
Sbjct: 157 PNNKVYQTMVHYICERRDFDLAFRLCKDIMEKNWFPSVDTINQLLKGLMAISKDRNGKEI 216
Query: 306 KKF 308
K
Sbjct: 217 MKL 219
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 4/263 (1%)
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
S++ G+ + E +KEM ++ +V F+ ++ L +++ V +E K +
Sbjct: 203 SLVKEGRIGVVESV---YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV-VEDMKAW 258
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + TYN +I +C++ A ++L EM K I PN +F L+ GF ++E
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV + M+R G++ V YN I+ LC K EA L D+M G+KPN VTY+ I G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK +EA++ + GL+PN + T++ K G + A + G PN
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
+T L+ G V EA++L
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKL 461
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 143/313 (45%), Gaps = 4/313 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F + IN L + F +E++K + + I Y +A A KE
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ + FN L+ ++ K+VF E + G++P++ TYN +I C +
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNG 348
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + +M +KPN ++ AL+ GF K++ ++ ++L + + G+ V +N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + K + +A L ML G+ PN TY+ I GFC++GN +EA+K + M +
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESI---AKGWVPNFTTMKSLVTGLAGASKV 372
GL + Y +V +CK G+ A+ E KG N T L+ G K+
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKL 528
Query: 373 SEAKELIGLVKEK 385
EA L+ + EK
Sbjct: 529 EEANRLLNEMLEK 541
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG + + N ++ + + S+ EM R+ I N +F ++ G K K++
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
V++ M+ +G V YN I CK K +A ALL EM++K + PN +T++ I
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
GFC+D N AKK + M GL PN Y +++ +C G + ALG + G P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEI 396
N T +L+ G + EA+E++ + K NV T+N +
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 8/258 (3%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHA 129
H + + F+I I+ + EE++ R LQ +S+I L + E A
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQ-RQGLQPNVVTYNSLINGLCSNGKLDE-A 353
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ +M L+ +V +NAL+ K KE + + + K G+ P++ T+N +I
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR-GLAPNVITFNTLID 412
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A+ ++ A+ + + M + PN S++ L+ GF +E ++ K+ + ME G+K+
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEML---SKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN+ + +LCK + +A LLDEM KG + N VTY+ I GFC G EEA
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532
Query: 307 KFYRIMSNSGLSPNSSVY 324
+ M GL PN + Y
Sbjct: 533 RLLNEMLEKGLIPNRTTY 550
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P+ T+N +I FC + ++A + EM R+ ++PN ++ +L+ G K ++
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M G+K V YN I+ CK + EA+ +LD++ +G+ PN +T++ I +
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G ++A +M ++G+ PN S Y ++ C+ G+ + A KE G +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474
Query: 357 TTMKSLVTGLAGASKVSEAKELIG----LVKEKFTKNVDTWNEIEAGL 400
T LV L + +A L+ + K+ N+ T+N + G
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGF 522
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+A + A M + + +V +N L++ + KE +++ E G+K
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-GLKA 472
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEM---DRKSIKPNASSFGALVAGFYKEEKYEDVN 236
DL TYN ++ A C+ ++ A +L EM ++K + N ++ L+ GF + K E+ N
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
++L M G+ + Y++ L DEM+ KG P+
Sbjct: 533 RLLNEMLEKGLIPNRTTYDI----------------LRDEMMEKGFIPD 565
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP--KT 174
I+ + + + A + KEM+ + L+ + +N L+ AL + ++ R+ E +
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
G + ++ TYN +IK FC A +L EM K + PN +++ L
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 171/354 (48%), Gaps = 1/354 (0%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L+ S+S+P EI A P + + I KL + YF+ I L K+R
Sbjct: 79 LIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRSKYFSLIDDLLLSFKSRRYP 138
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
++ I +YG+A++ + A++ F M + S N +L L +++
Sbjct: 139 VTPTAFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPAFD 198
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ + +G+ P+ +YN +I+AFC + + S AY++ +M +++ P+ ++ L+ G
Sbjct: 199 LFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGLC 258
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
++ + +L+ M G Y ++SLC+ +K EA LL M KG P+
Sbjct: 259 RKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIA 318
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y+ I GFC++G +A K M ++G PN Y ++ +C G +E A G+ +E
Sbjct: 319 HYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEM 378
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
KG+ P+F+ + +LV G ++ E+ ++ ++K + DTW I +G+
Sbjct: 379 TLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGI 432
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 5/194 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD +Y ++ + C AY +L M K P+ + + ++ GF +E + D
Sbjct: 277 GYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDA 336
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+L+ M+ G + Y + LC AK ++EM KG P+ + G
Sbjct: 337 CKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKG 396
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK--ESIAKGWV 353
F G E+ M G +P+S + ++ +C + E FC+ E I K V
Sbjct: 397 FHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGIC---EVEDTAKFCEVWEKILKKDV 453
Query: 354 PNFTTMKSLVTGLA 367
T + TGL
Sbjct: 454 RRDTRIVEAGTGLG 467
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 5/357 (1%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L+ S+S+P EI A+L P + + I I K + +F+ + L LK+
Sbjct: 48 LIASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRRLKSESSQ 107
Query: 108 Q-NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
++ I +YG+AN+ + A+ TF M + ++ N +L L ++Y
Sbjct: 108 PITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPAF 167
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ +G+ PD +YN +++AFC + D S AY++ +M ++ + P+ S+ L+
Sbjct: 168 DLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQAL 227
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
++ + + + M G Y ++SLC+ +K EA LL M KG P+
Sbjct: 228 CRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 287
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V Y+ I GFC++G +A K M +G PN Y T+V +C G + A + +E
Sbjct: 288 VHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEE 347
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGLPQ 402
++KG+ P+F + +LV G ++ EA L ++ + + DTW I +PQ
Sbjct: 348 MLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMII---VPQ 401
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 12/356 (3%)
Query: 46 LTLLKSESNPEKILEICRAA-----ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE 100
+T L+ +++PE L + +A LTP R + I KL A F+ + + E
Sbjct: 60 VTALREQADPEAALRMLNSALARDDGLTPS----RDVYEEIIRKLGTAGAFDLMKVLVGE 115
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTF-KEMDEHKLRHSVGAFNALLLALTIAK 159
++ I Y + + + A ++D ++ + +N LL L
Sbjct: 116 MRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGS 175
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
K ++ + E + GI+PD+ T+N VI A C + + +A +L EM + P+ ++F
Sbjct: 176 KIKLLESAYTEM-SSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTF 234
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ GF +E E ++ M G NV I+ CKL + +A + + ++
Sbjct: 235 TTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIA 294
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G +P+ VT+S F+ G C++G+ + A K +M G P+ Y T++ +C G+ E
Sbjct: 295 DGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEE 354
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
A G + + G +P+ TT +L+ L +++ EA +L L + + NV T+N
Sbjct: 355 AKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFN 410
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 7/277 (2%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ N E A+ +E+ L +V FN L+ AL D R+F E K+ G
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSG 436
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD TYN +I C S + A +L EM+ + ++ ++ G K + E+
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V M+ G+ +N I LC + +A L+D+M+S+G++PN+VTY+ + +
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN- 355
CK GN +A + M+ +G + Y T++ +CK + AL + KG P
Sbjct: 557 CKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTP 616
Query: 356 ---FTTMKSLVTGLAGASKVSEAKEL--IGLVKEKFT 387
++SL G G +S +E+ +G + FT
Sbjct: 617 KAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFT 653
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 9/325 (2%)
Query: 46 LTLLKSESNPEKILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L +E+ E+ L++ R L+P + F+I IN L + + + EE+K
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVY----TFNILINALCKVGDPHLAVRLFEEMK 433
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+ +E + I + A+ KEM+ S +N ++ L + +
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIE 493
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + VF + T GI + T+N +I C + A ++ +M + ++PN ++ ++
Sbjct: 494 EAEEVFDQMDVT-GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ + K+ +LQ M G + V Y I+ LCK R+ A LL M KGM
Sbjct: 553 LTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGM 612
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YETAL 341
KP Y+ I + N +A +R M+ G P++ Y + +C+GG + A
Sbjct: 613 KPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAF 672
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGL 366
F E G++P F++ + L GL
Sbjct: 673 DFLVEMADNGFIPEFSSFRMLAEGL 697
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ TY+ VI C + + A I+ +M P+ ++F L+ E + E+
Sbjct: 331 GCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEA 390
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + + G+ V +N+ I++LCK+ A L +EM S G P+ VTY+ I
Sbjct: 391 LDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDN 450
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G +A + M SG ++ Y T++ +CK E A + G N
Sbjct: 451 LCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRN 510
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T +L+ GL A ++ +A EL+ ++ E N T+N I
Sbjct: 511 AITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q +HA++ M + V ++ ++ L + +E K + + + G PD
Sbjct: 313 QNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS-GCLPDT 371
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N +I A C + A + E+ K + PN +F L+ K ++ +
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ G YN+ I +LC K A+A LL EM G ++VTY+ I G CK
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EEA++ + M +G+ N+ + T++ +C + A + I++G PN T S
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++T +S+A +++ + F +V T+ + GL
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 128/306 (41%), Gaps = 36/306 (11%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
N + H + + + + + + EM + V FN ++ AL A+ + +
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQAR-TAVLM 218
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+E + + PD T+ +++ F E +A + A M P + + L+ G+ K
Sbjct: 219 LEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCK 278
Query: 229 EEKYED-----------------------VN------------KVLQMMERYGMKSGVSM 253
+ D VN KVL +M + G + V
Sbjct: 279 LGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYT 338
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I+ LC + EAK ++++M+ G P++ T++ I C + EEA R ++
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GLSPN + ++ +CK GD A+ +E + G P+ T L+ L + K++
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA 458
Query: 374 EAKELI 379
+A +L+
Sbjct: 459 KALDLL 464
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ L A LEE+ + +E + + + E A+R
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M E + N L+ Y ++ RV +I+ G +PD T++ +
Sbjct: 255 ARMSEMGCSPTSVTVNVLI------NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFV 308
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A +L M ++ +P+ ++ ++ + E+ ++ M G
Sbjct: 309 NGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCL 368
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +N I +LC + EA L E+ KG+ PN T++ I CK G+ A +
Sbjct: 369 PDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRL 428
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M +SG +P+ Y ++ +C G AL KE G + T +++ GL
Sbjct: 429 FEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCK 488
Query: 369 ASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
++ EA+E+ + +N T+N + GL
Sbjct: 489 RRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 138/269 (51%), Gaps = 7/269 (2%)
Query: 137 DEHKLRHSVGAFNALLLAL-----TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ H +V ++NA+L AL + +DY + +RVF + + G+ P++ TYN +I+
Sbjct: 159 NRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRN-GVSPNVYTYNVIIRGV 217
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
D + +M+++ I PN ++ L+ K++K ++ +L+ M G+ + +
Sbjct: 218 VSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANL 277
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I+ LC + +E L++EM KG+ P+ VTY+ + GFCK+GN +
Sbjct: 278 ISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M GLSPN Y T++ MCK G+ A+ + +G PN T +L+ G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 372 VSEA-KELIGLVKEKFTKNVDTWNEIEAG 399
++EA K L ++ F+ +V T+N + G
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHG 426
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 142/304 (46%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++ IN L + + + +EE++ + + +E + + + + + E
Sbjct: 278 ISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M L +V + L+ + A + +F + + G++P+ TY +I FC+
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM-RVRGLRPNERTYTTLIDGFCQKG 396
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ AY +L+EM P+ ++ ALV G+ + ++ +L+ M G+ V Y+
Sbjct: 397 LMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYS 456
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I C+ R+ +A + +EM+ KG+ P++VTYS I G C EA +R M
Sbjct: 457 TVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRR 516
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y +++ C G+ AL E + +G++P+ T L+ GL ++ A
Sbjct: 517 GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVA 576
Query: 376 KELI 379
K L+
Sbjct: 577 KRLL 580
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A R F++M + + +V +N ++ + D E F+ + GI P++ TYN
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDL-EKGLGFMRKMEKEGISPNVVTYNT 247
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I A C+ A ++L M + N S+ +++ G + + +V ++++ M G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN ++ CK + LL EM+ KG+ PN VTY+ I CK GN A
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M GL PN Y T++ C+ G A E I G+ P+ T +LV G
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427
Query: 367 AGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+V EA ++ G+V+ +V +++ + AG
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 6/292 (2%)
Query: 113 HAHSIILYG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
+ +++I+ G Q ++ E + ++M++ + +V +N L+ A K KE +
Sbjct: 208 YTYNVIIRGVVSQGDL-EKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAM-ALL 265
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
G+ +L +YN VI C S ++ EM K + P+ ++ LV GF KE
Sbjct: 266 RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKE 325
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+L M G+ V Y I+ +CK + A + D+M +G++PN TY
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ I GFC+ G EA K M SG SP+ Y +V+ C G + A+G + +
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+G P+ + +++ G ++ +A ++ +V++ + T++ + GL
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 8/281 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +A + + ++++ R NER + I + Q + A + E
Sbjct: 348 VTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSE 407
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKE---VKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M SV +NAL+ +E + R +E G+ PD+ +Y+ VI FC
Sbjct: 408 MIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE----RGLPPDVVSYSTVIAGFC 463
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ + EM K + P+ ++ +L+ G ++K + + + M R G+
Sbjct: 464 RERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I++ C + ++A L DEM+ +G P++VTYS I G K + AK+ +
Sbjct: 524 TYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
P+ Y T++ C ++++ G K KG +
Sbjct: 584 FYEESVPDDVTYNTLIE-NCSNNEFKSVEGLVKGFCMKGLM 623
>gi|115450015|ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|125584252|gb|EAZ25183.1| hypothetical protein OsJ_08983 [Oryza sativa Japonica Group]
gi|215769058|dbj|BAH01287.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 423
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 35/366 (9%)
Query: 63 RAAALTPE----------SH----LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
R+AA TPE SH DR F++++++L+ A + ++ L T
Sbjct: 52 RSAAHTPEALADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAP 111
Query: 109 N--ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
+ E F I LY A M +H++ TF+ + R A +ALL A + Y +
Sbjct: 112 HPSEGFLIRLISLYSAAGMPDHSLSTFRIVTPPSDR----ALSALLSAYHDNRLYDRAIQ 167
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPNASSFGALVAG 225
F P GIKP + ++N ++K+F S D +SA ++ EM K+ ++P+ S ++ G
Sbjct: 168 AFRTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKG 227
Query: 226 FYKEEKYEDVNKVLQ-----MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+ Y ++ L+ + +K VS YN+R+ SLC + EA LLD M +K
Sbjct: 228 YLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFEAAELLDAMEAK 287
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM------SNSGLSPNSSVYFTMVYFMCKG 334
G+ PN +++ I G CK+G A ++ M + G+ PNS Y ++ +
Sbjct: 288 GVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLLEGLVNK 347
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN--VDT 392
G + AL KE + W P F ++ L+ GL + K AKE + + K K +
Sbjct: 348 GVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKE-VAMAMRKVVKGDAKEE 406
Query: 393 WNEIEA 398
W ++EA
Sbjct: 407 WKKVEA 412
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 5/268 (1%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+II+ G +AN + A+ F++M E + + +N ++ L A+ + V E
Sbjct: 11 TIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRD 69
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKY 232
+ PDL TY+ VI FC+ + A IL EM R I P+ ++ ++V G ++ K
Sbjct: 70 GKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKM 129
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML-SKGMKPNSVTYSH 291
+ ++++ M+ G++ ++ I C RK EA L E+L S KP+ VTY+
Sbjct: 130 DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTA 189
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GFCK GN E+A K +M PN Y ++++ +CK GD + AL + +KG
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI 379
VPN T +L+ GL A KV A+ L+
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLM 277
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 152/366 (41%), Gaps = 40/366 (10%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVR 131
D + +S IN + + + L E+ TR + + S++ L M + A
Sbjct: 76 DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKM-DRACE 134
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+EM + F+AL+ A+ E +++ E + KPD+ TY +I F
Sbjct: 135 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGF 194
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+S + A +L M+ + PN ++ +L+ G K + + + M G V
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 254
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y IH LC K A+ L+DEM + P++V+Y+ + G+C+ G EEAK+ ++
Sbjct: 255 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE 314
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYE----------TALG------------------- 342
M+ P+ Y +V C E TA G
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374
Query: 343 -------FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
F +E IA+ PN T SL+ GL A +V A E++ +V ++ +V T+N
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434
Query: 395 EIEAGL 400
+ L
Sbjct: 435 SVIGAL 440
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 4/272 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S +L+G +A + A+ F+ M +V + L+ L A + + E
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
T PD +YN ++ +C A + EM KS P+ ++ LV GF +
Sbjct: 282 ATC-CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRL 340
Query: 233 EDVNKVLQMMERY-GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E+ +L+ M+ G+ V Y++ + + ++ EA + EM+++ + PN+VTYS
Sbjct: 341 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 400
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G CK G + A + + M N + P+ + +++ +C+ GD + A A G
Sbjct: 401 LIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 460
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
P T +L+ G + ++ A EL +++
Sbjct: 461 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E A + FKEM + L+ A +E + + GI P
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ V+ + + A + EM +++ PNA ++ +L+ G K + + +VL
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL 418
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M ++ V +N I +LC+L EA LL M + G++P VTY+ + GF +
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 478
Query: 300 GNFEEAKKFYRIM--------SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
G E A + + +M S + L P + + ++ +CK + + A+ +E ++
Sbjct: 479 GRMEIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRE 537
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI 379
P ++V GL A + EA +LI
Sbjct: 538 CEPAEEDCLAIVDGLLRAGRTEEAGKLI 565
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 33/254 (12%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
AA + P D + +SI + S A F +++++E+ R N ++ I +A
Sbjct: 353 AAGIDP----DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 408
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+HA+ K M ++ SVG FN+++ AL D E ++ + +G++P + T
Sbjct: 409 GRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA-AHGLEPGMVT 467
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ F + AY + M +K+ K ++++ N V +
Sbjct: 468 YTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAA-----------------NLVPE--- 507
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
++ I LCK R+ +A A+++E+ S+ +P + G + G E
Sbjct: 508 --------QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 559
Query: 304 EAKKFYRIMSNSGL 317
EA K +S GL
Sbjct: 560 EAGKLINSISKVGL 573
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 42/147 (28%)
Query: 283 KPNSVTYSHFIYGFCKDGN-------FEEAKKF-------YRIMSNS------------- 315
+P VT++ I GFCK FE+ ++F Y ++ N
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 316 --------GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMKSLVTGL 366
++P+ Y T++ CK G+ + A +E + + G P+ T S+V GL
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
K+ A E++ G+ +KFT
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFT 150
>gi|242067098|ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 188/405 (46%), Gaps = 21/405 (5%)
Query: 12 NLFSQKHH--RYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTP 69
+L S++H R L+T + L++ T D +R ++ + ++P+ + + + P
Sbjct: 13 SLLSRRHLLVRLLSTQTQLATPPTP-TTPADLSRLKSSIRDAATSPDALATLFLSGLPHP 71
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQ-NERFHAHSIILYGQANMTE 127
DR F++++++L+ A + ++ L L P +E F I LY A M +
Sbjct: 72 AFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPD 131
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
H++ F+ ++ R A +ALL + Y R F P GIKP L ++N +
Sbjct: 132 HSLTVFRLVNPPSDR----ALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVL 187
Query: 188 IKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYK---EEKYEDVNKVLQMME 243
+KA S D ++A S +M D ++P+ S ++ G+ + ++ + K +
Sbjct: 188 LKALVASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTGDDAAFDQLVKEIAGPN 247
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R +K V YN+R+ LC + EA+ LLD M + G+ PN +++ I G C +G
Sbjct: 248 RR-LKPNVGTYNLRMAMLCSKERSFEAEELLDAMGANGVPPNRASFNTVIKGLCNEGEVG 306
Query: 304 EAKKFYRIMS------NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
A ++ M G+SPN Y ++ + ++ AL CKE + W P F
Sbjct: 307 AAMALFKRMPEVPRQKGKGVSPNFETYIMLLEALVNKNLFDPALEVCKECLHNKWAPPFQ 366
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV-DTWNEIEAGLP 401
+K LV L + K A+E++ +++ + W ++EA P
Sbjct: 367 AVKGLVESLLKSRKAKHAREVLMAMRKAVKGDAKQEWTKVEAQFP 411
>gi|147778708|emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 13/337 (3%)
Query: 26 SILSSGDKTPLTSKD--KTRAALTLLKSESNPEKIL----EICRAAALTPESHLDRLAFS 79
S D L KD R L + NPE ++ +C+ P L ++
Sbjct: 34 STFPPDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVCKRKDFKPNEAL----YT 89
Query: 80 IAINKLSEANYFNGISQYLEELKTRPDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKEMD 137
+ INKL++A F+ I ++ LK + ++ F + I +YG A + AV T +M
Sbjct: 90 LVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMP 149
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ SV FN +L L AK + V +V+ P+ G++ D N ++K C S +
Sbjct: 150 KFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPE-LGVEIDACCLNILVKGLCRSGNV 208
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+A +L E ++ +PN +F L+ G + + E +L+ MER G+ ++N+
Sbjct: 209 DAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNIL 268
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I L K + E LL M KG PN+ +Y +YG G F +AK+F M + G+
Sbjct: 269 ISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGV 328
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
SP+ Y ++Y +CK + K+ + +G+VP
Sbjct: 329 SPSFVSYKMVIYGLCKENLVADVVWILKQMVEQGFVP 365
>gi|357488555|ref|XP_003614565.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515900|gb|AES97523.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 140
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
TPLTSK+K+R+ L LL SE+NPE IL ICRAA+L+P+SHLDRLA S A++KL+ F+
Sbjct: 18 TPLTSKEKSRSTLRLLNSETNPETILSICRAASLSPDSHLDRLALSTAVSKLTAGKNFDI 77
Query: 94 ISQYLEE-LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+ Q+L+E L++R DLQNERF +H+I+LYGQANM A+ TFK M E
Sbjct: 78 LRQFLDEFLQSRSDLQNERFVSHTIVLYGQANMMNQALDTFKFMRE 123
>gi|125524099|gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 171/366 (46%), Gaps = 35/366 (9%)
Query: 63 RAAALTPE----------SH----LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
R+AA TPE SH DR F++++++L+ A + ++ L T
Sbjct: 52 RSAAHTPEALADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAP 111
Query: 109 N--ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
+ E F I LY A M +H++ TF+ + R A +ALL A + Y +
Sbjct: 112 HPSEGFLIRLISLYSAAGMPDHSLSTFRIVTPPSDR----ALSALLSAYHDNRLYDRAIQ 167
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPNASSFGALVAG 225
F P GIKP + ++N ++K+F S D +SA ++ EM K+ ++P+ S ++ G
Sbjct: 168 AFRTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKG 227
Query: 226 FYKEEKYEDVNKVLQ-----MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+ Y ++ L+ + +K VS YN+R+ SLC + EA LLD M +K
Sbjct: 228 YLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFEAAELLDAMEAK 287
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM------SNSGLSPNSSVYFTMVYFMCKG 334
G+ PN +++ I G CK+G A ++ M + G+ PNS Y ++ +
Sbjct: 288 GVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLLEGLVNK 347
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN--VDT 392
G + AL KE + W P F ++ L+ GL + K AKE + + K K +
Sbjct: 348 GVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKE-VAMAMRKVVKGDAKEE 406
Query: 393 WNEIEA 398
W + EA
Sbjct: 407 WKKFEA 412
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 24/371 (6%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
+LK + +P K L I + L + I KL F+ + + L E++ D
Sbjct: 13 VLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDN 72
Query: 108 QN-ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
E + ++ YG+ + AV F+ MD + S+ ++NA++ L + + +
Sbjct: 73 SLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHK 132
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
V++ K GI PD+ T+ IK+FC + +A +L M + + NA + +++GF
Sbjct: 133 VYLRM-KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGF 191
Query: 227 YKE----EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
Y+E E YE NK+L R G+ ++ +N +H LCK E + LL+++L G+
Sbjct: 192 YEENYQVEAYELFNKML----RLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGV 247
Query: 283 KPNSVTYSHFIYGFCKDGNFE-------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
PN T++ FI G C+ G E EA+ + M N GL P+ Y T++Y K G
Sbjct: 248 CPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVG 307
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK----NVD 391
+ A K++ KG+VP+ T SL+ G+ + A + L +E K ++
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA---LALFEEALGKGLKPSIV 364
Query: 392 TWNEIEAGLPQ 402
+N + GL Q
Sbjct: 365 LYNTLIKGLSQ 375
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 36/243 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ T+N +I +C+ +A IL M + P+ ++ +++ G K K EDV
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +M+ G + YN+ I SLCK RK EA LL+E+ ++G+ P+ V++ I G
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547
Query: 296 FCKDGNFEEAKKFYR----------------IMSNS--------------------GLSP 319
FC +G+ +EA + +R IM N+ G P
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+S Y M+ CK G+ + F + I G+VP+ TT ++ L +V EA ++
Sbjct: 608 DSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIV 667
Query: 380 GLV 382
L+
Sbjct: 668 HLM 670
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 5/235 (2%)
Query: 156 TIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
TI Y +V ++ ++ K G PD TY +I C+ D A ++ E K
Sbjct: 298 TIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK 357
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+KP+ + L+ G ++ +++ M + GM + YN+ I+ LCK+ ++A
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
LL+ ++KG P+ T++ I G+CK + A M + G++P+ Y +++
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+CK E + K + KG +PN T L+ L A KV+EA +L+ ++ +
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNR 532
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP + YN +IK + A ++ +M ++ + P+ ++ ++ G K D
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N +L G + +N I CK K A +LD M S G+ P+ +TY+ + G
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK E+ + ++++ G PN Y ++ +CK AL +E +G +P+
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKF--TKNVDTWN 394
+ ++++G + EA +L +++++ V T+N
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYN 578
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A+ M H + V +N++L L A ++V F + G P++ TYN
Sbjct: 450 DNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF-KMIMEKGCLPNIITYNI 508
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER-Y 245
+I++ C++ + A +L E+ + + P+ SFG +++GF ++ ++ + ME+ Y
Sbjct: 509 LIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQY 568
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ V+ YN+ I++ + A+ L EM KG P+S TY I GFCK GN
Sbjct: 569 RICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSG 628
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
F G P+ + + ++ +C A+G + G VP +++VT
Sbjct: 629 YDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP-----EAVVTI 683
Query: 366 LAGASKVSEAKELI 379
K A ++I
Sbjct: 684 FDADKKAVAAPKII 697
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 2/203 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E + TFK + E ++ +N L+ +L A+ E + E + G+ PD
Sbjct: 480 KAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEI-RNRGLIPDP 538
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
++ VI FC + D AY + M+++ I +++ ++ F ++ + K+
Sbjct: 539 VSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFH 598
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G Y V I CK+ L + + G P+ T+ I C
Sbjct: 599 EMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQH 658
Query: 301 NFEEAKKFYRIMSNSGLSPNSSV 323
EA +M +G+ P + V
Sbjct: 659 RVHEAVGIVHLMVRTGVVPEAVV 681
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ IN L +S L E+ R +E + I Y + A+ E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M H L SV + +L+ ++ A + F++ + G+ P+ TY ++ F +
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ AY +L EM+ P+ ++ AL+ G K ED VL+ M+ G+ V Y+
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ C+ EA + EM+ KG+KP+++TYS I GFC+ +EA Y M
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y ++ C GD E AL E + KG +P+ T L+ GL S+ EA
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 376 KELI 379
K L+
Sbjct: 575 KRLL 578
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 3/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK-DYKEVKRVFIEFPKTYGIK 178
Y + ++ + A+ H V ++NA+L A +K + + VF E ++ +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVS 202
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN +I+ FC + + A ++ +M+ K PN ++ L+ G+ K K +D K+
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ M G++ + YNV I+ LC+ + E +L EM +G + VTY+ I G+CK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+GNF +A + M GL+P+ Y ++++ MCK G+ A+ F + +G PN T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+LV G + ++EA ++ + + F+ +V T+N + G
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A FKEM E ++ +V +N L+ A + +V + +T G P++ TYN +I
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + +L M K ++PN S+ ++ G +E + ++V+ VL M R G
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN I CK +A + EML G+ P+ +TY+ I+ CK GN A +F
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL PN Y T+V + G A +E G+ P+ T +L+ G
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
K+ +A ++ +KEK + +V +++ + +G
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 152/364 (41%), Gaps = 55/364 (15%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
LTP + ++ I+ + +A N ++L++++ R NER + + + Q
Sbjct: 340 GLTPSV----ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
A R +EM+++ SV +NAL+ + ++ V +E K G+ PD+ +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV-LEDMKEKGLSPDVVSYS 454
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ FC S D A + EM K IKP+ ++ +L+ GF ++ + ++ + + M R
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS--------------- 290
G+ Y I++ C +A L +EM+ KG+ P+ VTYS
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 291 -----------------------------------HFIYGFCKDGNFEEAKKFYRIMSNS 315
I GFC G EA + + M
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
P+ + Y M++ C+ GD A KE + G++ + T+ +LV L KV+E
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 376 KELI 379
+I
Sbjct: 695 NSVI 698
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P+L +YN VI C +L EM+R+ + ++ L+ G+ KE +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M R+G+ V Y IHS+CK A LD+M +G+ PN TY+ + G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F + G EA + R M+++G SP+ Y ++ C G E A+ ++ KG P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 356 FTTMKSLVTGLAGASKVSEA 375
+ ++++G + V EA
Sbjct: 450 VVSYSTVLSGFCRSYDVDEA 469
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T++A+ +M V + LL A YK+ ++ E + G PD+ TYN
Sbjct: 168 TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM-RDKGCAPDIVTYN 226
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ C+ A L + +PN S+ ++ G E++ED K++ M R
Sbjct: 227 VVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRK 286
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V +N+ I LC+ A +LD++ G PNS++Y+ ++ FCK + A
Sbjct: 287 GRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 346
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
F +M +SG P+ Y T++ +C+GG+ + A+ + KG P + +++ G
Sbjct: 347 MAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 406
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L A K EA EL+ +V + ++ T++ I +GL
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 5/308 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D + +++ +N + + + ++L+ L + N +++I+L G A E A +
Sbjct: 221 DIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNT--VSYNIVLKGLCTAERWEDAEK 278
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM +V FN L+ L + + + PK YG P+ +YN ++ AF
Sbjct: 279 LMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK-YGCTPNSLSYNPILHAF 337
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A + + M P+ S+ L+ + + + ++L ++ G +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I L K K EA LL+EM++KG++P+ +TYS G C++G EEA K +
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + G+ PN+ +Y ++ +CK +A+ ++ G +PN +T L+ GLA
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGL 517
Query: 372 VSEAKELI 379
V EA+E++
Sbjct: 518 VKEAREMM 525
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV+ EM + + +N ++ + + P +YG +P+ +YN
Sbjct: 204 KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLP-SYGCEPNTVSYNI 262
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+K C + A ++AEM RK PN +F L++ + E ++L + +YG
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
YN +H+ CK +K A A ++ M+S G P+ V+Y+ + C+ G + A
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + G +P Y T++ + K G E AL E + KG P+ T ++ +GL
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ EA + V++ + N +N I GL
Sbjct: 443 CREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGL 477
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V ++NA++ + +R+ P ++PD TYN +I+ C + +A ++L
Sbjct: 120 VMSYNAMVAGYCVTGQLDNARRLVAAMP----MEPDTYTYNTLIRGLCGRGRTDNALAVL 175
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+M R+ P+ ++ L+ K Y+ K+L M G + YNV ++ +C+
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A L + S G +PN+V+Y+ + G C +E+A+K MS G PN +
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295
Query: 325 FTMVYFMCKGGDYETAL-----------------------GFCKES------------IA 349
++ F+C+ G E A+ FCK+ ++
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
G P+ + +L+T L +V A EL+ +K+K T + ++N + GL
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R + M + + G AL+ L + E +RV +PD+ +YN
Sbjct: 73 EEAIRLVESMAGLE-PSAAGPCAALIKKLCASGRTAEARRVLAS------CEPDVMSYNA 125
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C + +A ++A M ++P+ ++ L+ G + ++ VL M R G
Sbjct: 126 MVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V Y + + + CK +A LLDEM KG P+ VTY+ + G C++G ++A
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F + + + G PN+ Y ++ +C +E A E KG PN T L++ L
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302
Query: 367 AGASKVSEAKELIGLV-KEKFTKNVDTWNEI 396
V A E++ + K T N ++N I
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 124/300 (41%), Gaps = 1/300 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I + L A + + + E+ + N I + + E A+ +
Sbjct: 258 VSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQ 317
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ ++ + ++N +L A K F+E + G PD+ +YN ++ A C
Sbjct: 318 IPKYGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELMVSSGCYPDIVSYNTLLTALCRGG 376
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A +L ++ K P S+ ++ G K K E+ ++L M G++ + Y+
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYS 436
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
LC+ + EA ++ G++PN+V Y+ + G CK A + M ++
Sbjct: 437 TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G PN S Y ++ + G + A E ++G V K + L G S+
Sbjct: 497 GCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLLDGTMHTSKG 556
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I LC + AEA+ +L +P+ ++Y+ + G+C G + A++ M +
Sbjct: 97 IKKLCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---M 148
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P++ Y T++ +C G + AL + + +G VP+ T L+ S +A +
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208
Query: 378 LIGLVKEK-FTKNVDTWNEIEAGLPQ 402
L+ +++K ++ T+N + G+ Q
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQ 234
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 7/317 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D L + + +L + + +EE+ TR ++ + F ++ +L G Q E A
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAF-IYNFVLSGLCQEEKVEEARL 65
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F++M + ++ +V +N L+ L A + +F E G P +YN +I F
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGF 124
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ D +A + +M R + PN ++ L+ G K K + +VL M + G+ V
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 184
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ Y+ I CK+R+ EA LL++M+++G+ P VTY+ + C+ E+A K +R
Sbjct: 185 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 244
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M+ P Y T++ +C + A E IAKG P+ T +L GL A K
Sbjct: 245 MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGK 304
Query: 372 VSEAKELIGLVKEKFTK 388
V EA+EL + K K TK
Sbjct: 305 VHEAQEL--MEKMKLTK 319
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 1/217 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD TY +++ C++ A + + EM + IKP+A + +++G +EEK E+ +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + + V YN I+ LCK + A L EM KG P V+Y+ I GFCK
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ AK + M S PN Y T++ + K G + A + KG PN T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
L+ G +V EA +L+ +V + V T+N
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A FKEM + ++N L+ KD K VF + ++ + P++ TY
Sbjct: 96 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV-PNVVTYTT 154
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +S +A +L M +K + PN +++ L+ GF K + ++ +K+L+ M G
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214
Query: 247 MKSGVSMYNVRIHSLCKL---------------RKCAE--------------------AK 271
+ V YN+ ++SLC+ R+C A
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 274
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
L EM++KG P+++TY +G + G EA++ M + +P
Sbjct: 275 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%), Gaps = 2/319 (0%)
Query: 84 KLSEANYFNGISQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
KLS A F+ + + +L+ P E + YG A E ++R F + + +
Sbjct: 92 KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 151
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ SV + N LL L + + V +F +++GI P++ T N ++KA C+ +D SAY
Sbjct: 152 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L E+ + PN ++ ++ G+ E +VL+ M G + Y V +
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CKL + +EA ++D+M ++PN VTY I CK+ EA+ + M P+S
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
S+ ++ +C+ + A G ++ + +P+ + +L+ L +V+EA++L
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 382 VKEKFTKNVDTWNEIEAGL 400
++ ++ T+N + AG+
Sbjct: 392 FEKGSIPSLLTYNTLIAGM 410
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 37/307 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N E A + E+ L ++ + +L D + KRV E G PD
Sbjct: 203 KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDA 261
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQ 240
TY ++ +C+ S A +++ +M++ I+PN ++G ++ KE+K E N +
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 241 MMERYGMKSGV----------------------------------SMYNVRIHSLCKLRK 266
M+ER M ++ + IH LCK +
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA+ L DE KG P+ +TY+ I G C+ G EA + + M PN+ Y
Sbjct: 382 VTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ + K G+ + + +E + G PN TT L GL K +A +++ +
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Query: 387 TKNVDTW 393
+ ++W
Sbjct: 501 KVDKESW 507
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 153/319 (47%), Gaps = 2/319 (0%)
Query: 84 KLSEANYFNGISQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
KLS A F+ + + +L+ P E + YG A E ++R F + + +
Sbjct: 90 KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 149
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ SV + N LL L + + V +F +++GI P++ T N ++KA C+ +D SAY
Sbjct: 150 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 209
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L E+ + PN ++ ++ G+ E +VL+ M G Y V +
Sbjct: 210 KVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGY 269
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CKL + +EA ++D+M ++PN VTY I CK+ EA+ + M + P+S
Sbjct: 270 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDS 329
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
S+ ++ +C+ + A G ++ + +P+ + +L+ L +VSEA++L
Sbjct: 330 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDE 389
Query: 382 VKEKFTKNVDTWNEIEAGL 400
+ ++ T+N + AG+
Sbjct: 390 FDKGSIPSLLTYNTLIAGM 408
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 37/307 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N E A + E+ L ++ + +L D + KRV E G PD
Sbjct: 201 KKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDA 259
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQ 240
TY ++ +C+ S A +++ +M++ I+PN ++G ++ KE+K E N +
Sbjct: 260 ITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 319
Query: 241 MMERYGMKSGV----------------------------------SMYNVRIHSLCKLRK 266
M++R M ++ + IH LCK +
Sbjct: 320 MLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 379
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+EA+ L DE KG P+ +TY+ I G C+ G EA + + M PN+ Y
Sbjct: 380 VSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNV 438
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ + K G+ + + +E + G PN TT L GL K +A +++ +
Sbjct: 439 LIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG 498
Query: 387 TKNVDTW 393
+ ++W
Sbjct: 499 KVDKESW 505
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ TYN +I C++S + A +L EM + + P+ +F +++ G K K+E +
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L +M + YN I LCK + AK L+DE +S G P+ VTYS G
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +EA + + MS +G +PN Y T++ +CK E A + ++ G+VP+
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +V GL ++ +A +++ G++K T +V T+ + GL
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E K+ V +N L+ L A + + E G+ PD T+N ++ C++
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD-RGVTPDTVTFNSIMDGLCKAG 59
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A+S+LA M ++ +P+ ++ L++G K++ + ++ G V Y+
Sbjct: 60 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS 119
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LCK + EA L+ EM G PN VTY+ I G CK E+A + + +S
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P+ Y +V +CK G + AL + + +G P+ T +L+ GL +V EA
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239
Query: 376 KELIGLVKEKFTKN 389
+ KE +K+
Sbjct: 240 HHIF---KEMVSKD 250
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ E K PD+ ++I++ G +A+ T+ A EM + + FN+++ L
Sbjct: 1 MNERKVAPDV-----FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 55
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A ++ + + +P TYN +I C+ + A +++ E P+
Sbjct: 56 CKAGKFERAHSLLAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPD 114
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L G K + ++ ++++ M G + YN I LCK K +A LL+
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
++S G P+ VTY+ + G CK+G ++A K M G +P+ Y ++ +C+ G
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNE 395
+ A KE ++K + SLV G +S+ EA++++ ++ T +D +N
Sbjct: 235 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG--TPYIDVYNA 292
Query: 396 IEAG 399
+ G
Sbjct: 293 LMDG 296
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 11/311 (3%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
+ I E++ R + N ++I++ G + + A + M V ++
Sbjct: 303 LDEIPNVFEDMACRGCVPN--IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N ++ L A KE ++V + + GI PD TYN ++ FC+ A IL M
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 419
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG-MKSGVSMYNVRIHSLCKLRKC 267
+ + P+ ++ L++G + + D +++ M R G + S + YN I LCK
Sbjct: 420 KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCL 479
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A L+D M G++ N+VTY+ FI CK+G +EA ++S + Y T+
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS---LLSEMDTLRDEVSYTTV 536
Query: 328 VYFMCKGGDYETALGFCKESIA-KGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEK 385
+ +CK + A +E +A KG T L+ ++ EA L+ L V+
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596
Query: 386 FTKNVDTWNEI 396
+ +V T+N +
Sbjct: 597 CSPSVITYNMV 607
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 143/309 (46%), Gaps = 14/309 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEHAV 130
+ ++ I+ L +A+ + LE L + PD+ ++II+ G + + A+
Sbjct: 151 VTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT-----YTIIVDGLCKEGRLDKAL 205
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ + M + SV + AL+ L E +F E + D Y ++
Sbjct: 206 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV-SKDCTADALAYVSLVNG 264
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C+SS + A ++ D P + AL+ G+ KE + +++ V + M G
Sbjct: 265 YCKSSRTKEAQKVV---DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 321
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN+ + LCK K EA L+ M S G P+ V+Y+ I G K +EA++
Sbjct: 322 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M +G+ P++ Y T++ CK ++ A+G K I G P+ T +L++GL+ +
Sbjct: 382 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441
Query: 371 KVSEAKELI 379
++ +A EL+
Sbjct: 442 RLGDAYELM 450
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 14/275 (5%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
++LE ++ P D + ++I ++ L + + + +E + R P +
Sbjct: 171 ELLETLVSSGFVP----DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 226
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+ G+ + H FKEM A+ +L+ + KE ++V
Sbjct: 227 MEGLCRTGRVDEAHH---IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG 283
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T P +D YN ++ +C+ ++ +M + PN ++ ++ G K K +
Sbjct: 284 T----PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ L+ M G V YN+ I L K K EA+ +LD+M+ G+ P++VTY+ +
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
FCK+ F++A + M +G+ P++ Y T++
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G++ + TYN I C+ A S+L+EMD + S+ ++ G K E+ +
Sbjct: 492 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDR 548
Query: 235 VNKVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+K+ +M+ G+ +N+ I + K ++ EA LL+ M+ +G P+ +TY+ I
Sbjct: 549 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVI 608
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
CK ++A + + M+ G+ +S Y ++Y +C G + AL +E +
Sbjct: 609 TCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 668
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
+ + L L G + EA EL+
Sbjct: 669 IDDLKCRKLYLALRGQGRGEEAAELL 694
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A EMD LR V ++ +++ L A+ ++ E G+ T+N
Sbjct: 515 DEASSLLSEMD--TLRDEV-SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNL 571
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I AF ++ A ++L M ++ P+
Sbjct: 572 LIDAFTKTKRLDEALTLLELMVQRGCSPS------------------------------- 600
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V YN+ I LCKL K +A L DEM +G+ +SV+Y+ IYG C G +EA
Sbjct: 601 ----VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656
Query: 307 KFYRIMSNS 315
+ M++S
Sbjct: 657 QVLEEMASS 665
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 4/278 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E L P N R H I+ Q + + A + F EM+ + ++ L+ L
Sbjct: 141 MERLGCTP---NRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A E ++F + GI P TYN VI C + A + M K +P+
Sbjct: 198 AGKLNEAYKLFRRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRF 256
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+F L+ K K ++ ++L+ M G V Y+ I LC + + +A+ LL++M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ + KP VT + I+G CK G +EA++ M +SG SP+ Y T+V+ C+ G
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E A + +A+G PN T +LV+GL A+++ EA
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 5/309 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
+R + + I L + + + Q E++ R D+ + + ++ I++ G +A A +
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEAR-DIPPDSW-SYGILIDGLAKAGKLNEAYK 206
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F+ M + + S +N ++ + +A E +F ++ G +P T+N +I A
Sbjct: 207 LFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAH 265
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A+ +L M P+ ++ L++G + +D +L+ M + K V
Sbjct: 266 CKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
N IH LCK + EA+ +LD M+S G P+ VTY+ ++G C+ G E A++
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M GL+PN Y +V +CK A G + + G PN T +L+ G A +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 372 VSEAKELIG 380
V +L G
Sbjct: 446 VDGGLKLFG 454
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
+ +TP + +A++ I+ L AN F+ + ++ R + + I +
Sbjct: 39 SGVTPST----VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRG 94
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A K+M E V +N ++ L + +E +F E + G P+ ++
Sbjct: 95 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMER-LGCTPNRRSH 153
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ S A + EM+ + I P++ S+G L+ G K K + K+ + M
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD 213
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ YNV IH +C EA L M SKG +P+ T++ I CK G +E
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDE 273
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + + M++ G P+ Y T++ +C + A ++ + + P T +L+
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
GL A ++ EA+E++ +V + +V T+N + G
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 9/325 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D ++ I I+ L++A N + + P H + L A + A+
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCL---AYTLDEAL 240
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FK M R S FN L+ A E R+ G PD+ TY+ +I
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD-GHVPDVVTYSTLISG 299
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + A +L +M ++ KP + L+ G K + ++ +VL M G
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN +H C+ + A+ LL +M+++G+ PN VTY+ + G CK EA +
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M +SG +PN Y ++ C G + L E + G P+ +L L +
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Query: 371 KVSEAKELIGLVKEKFTKNVDTWNE 395
+ + A E++ +E + W +
Sbjct: 480 RSARALEILREGRESLRS--EAWGD 502
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYG--QANMTEH 128
D ++ I I+ L++A N ++L P A++ +++G AN +
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTV-----AYTSLIHGLCMANSFDD 63
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F +M+ S +N ++ A + + E I+ G PD+ TYN V+
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDA-SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+S A + EM+R PN S ++ G ++ K + +V ME +
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y + I L K K EA L ML G+ P++VTY+ I+G C +EA +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M + G P+ + ++ CK G + A K G VP+ T +L++GL
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++V +A+ L+ +VK + V T N + GL
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD +Y +I ++ + A + ++ + P+ ++ +L+ G ++D
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M R G YNV I + CK EA L+ +M+ G P+ VTY+ + G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G EEA + M G +PN + T++ +C+ + A E A+ P+
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ L+ GLA A K++EA +L ++ T + T+N + G+
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ +++ P++ S+G L+ G K K D + Q + G+ Y IH LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A+ L +M +G P+ VTY+ I CK G EEA + M G P+ Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ +CK G E AL E G PN + +++ GL SK+ +A ++ E
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF---HEME 177
Query: 387 TKNV--DTWN 394
+++ D+W+
Sbjct: 178 ARDIPPDSWS 187
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M + + P+S +Y I G K G +A+ ++ + +SG++P++ Y ++++ +C
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNE 395
++ A + +G P+ T ++ + EA +LI ++++ +V T+N
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 396 IEAGL 400
+ GL
Sbjct: 121 VMDGL 125
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 76/213 (35%), Gaps = 45/213 (21%)
Query: 105 PDLQ--NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PD+ N H H +A TE A +M L +V + AL+ L A
Sbjct: 358 PDVVTYNTLVHGHC-----RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E VF + K+ G P+L TY +I FC + + EM I P+ +G L
Sbjct: 413 EACGVFAQM-KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 223 VAGFYK------------------------EEKYE-------DVNKV------LQMMERY 245
A K +E Y D K+ ++ M R
Sbjct: 472 AAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRG 531
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
G + LCK + EA+A+L+E++
Sbjct: 532 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 140/281 (49%), Gaps = 3/281 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKRVFIEFPKTYGIKP 179
+ N+ A+ + V ++NA+L A+ K K + +F E ++ G+ P
Sbjct: 143 ARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSP 201
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN +I+ FC + + EM+R PN ++ ++ + K K + K+L
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++M G+ + YNV I+ LC+ + E +L+EM + P+ VT++ I G+C
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GNF +A + M +GLSPN Y T++ MCK G+ A+ F + +G PN T
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+L+ G + + +A +++ +V+ FT + T+N + G
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 14/345 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
K+L + L P + +++++ IN L S+ LEE+ R PD R
Sbjct: 259 KLLRLMALKGLNP----NLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD----RVT 310
Query: 114 AHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+++I Y A+ EM ++ L +V + L+ ++ A + F++
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME-FLDQM 369
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ P+ TY +I F + AY I+ EM P ++ AL+ G +
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
ED + +LQ M G V Y+ I C+ ++ +A L EM++KG+ P+ TYS
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK E ++ M + GL P+ Y +++ C GD + AL E I KG+
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEI 396
P+ T L+ G S+ EAK L+ L+ E+ N T+N +
Sbjct: 550 SPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FKEM E + +V +N L+ A + + F E + G P++ TYN +I A+C
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERN-GCLPNVVTYNTIIDAYC 249
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ +L M K + PN S+ ++ G +E + ++ +++L+ M +
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I+ C + +A L EM+ G+ PN VTY+ I CK GN A +F M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ GL PN Y T++ + G + A KE + G+ P T +L+ G ++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+A L+ +++ F +V +++ I +G
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISG 457
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +A N ++L++++ R N R + I + Q + A + KE
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E+ ++ +NAL+ I ++ + E + G PD+ +Y+ +I FC +
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFCRNQ 462
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A+ + EM K I P+ +++ +L+ G K+ + +V + Q M G+ Y
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I++ C +A L DEM+ KG P+ VTY+ I GF K +EAK+ +
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
PN Y T++ C ++++AL K KG +
Sbjct: 583 ESVPNEITYNTLID-NCNNLEFKSALALMKGFCMKGLM 619
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + EM + V +++L+ L + EV +F E + G+ PD TY
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM-LSLGLPPDEVTYTS 523
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERY 245
+I A+C D A + EM +K P+ ++ L+ GF K+ + ++ ++L +++
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583
Query: 246 GMKSGVSMYNVRIHS---------------LCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + ++ YN I + C EA +L+ ML KG K N Y+
Sbjct: 584 SVPNEIT-YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
I+G K GN E+A Y+ M +SG +P+S
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHS 673
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 93/240 (38%), Gaps = 51/240 (21%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+EM L + +L+ A I D + R+ E + G PD+ TYN +I F
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK-GFSPDIVTYNVLINGFN 564
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFG---------------ALVAGFYKEEKYEDVNK 237
+ S + A +L ++ + PN ++ AL+ GF + + ++
Sbjct: 565 KQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADR 624
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT--------- 288
VL+ M + G K +YNV IH K+ +A L EML G P+SVT
Sbjct: 625 VLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLY 684
Query: 289 -------------------------YSHFIYGF-CKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ + G K+GN + + M+ SGL P SS
Sbjct: 685 HEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSS 744
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 160/330 (48%), Gaps = 13/330 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K++E + + LTP D +A++ +N L + N +S+ LEE+ + + F ++
Sbjct: 183 KLMEKMKESGLTP----DTVAYNALLNGLCKQNQLEEVSKLLEEM-VEAGREPDTFSYNT 237
Query: 117 II-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++ ++ E A + ++M E K V +N+L+ E +R +E
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER-LLEDMVGR 296
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
P + TY +I F + + AY ++ +M + I P+ ++ L+ G K K E+
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++L++M V Y++ ++ LCKL K +A+ LL+ ML +G +PN VT++ I G
Sbjct: 357 HELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDG 416
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK G +E K +M +P+ Y T++ CK + A G P+
Sbjct: 417 FCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPD 470
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ S++ GL KV EA+E++ L+ ++
Sbjct: 471 KASYSSMLEGLCSTGKVEEAQEVMDLMTKQ 500
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 152/331 (45%), Gaps = 2/331 (0%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ H D ++ I L + + L+ + R + + + I+ Q N + A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ ++M E L A+NALL L +EV ++ E + G +PD +YN V+
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA-GREPDTFSYNTVVA 240
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
CES A IL +M K P+ ++ +L+ GF K K ++ ++L+ M
Sbjct: 241 CLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V Y I + + A+A ++++M G+ P+ VTY+ + G CK G EEA +
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+M +P+ Y +V +CK G + A + + +G PN T +++ G A
Sbjct: 361 EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420
Query: 370 SKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
KV E +++ L+KE T +V T++ + G
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDG 451
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Query: 156 TIAKDYKEV---KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
TI K Y ++ R F P TY +I C+ AY +L EM +K
Sbjct: 64 TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P+A+ + L+AG K K + VL+MM V Y I C+ EA+
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L+++M G+ P++V Y+ + G CK EE K M +G P++ Y T+V +C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVD 391
+ G YE A ++ I K P+ T SL+ G SK+ EA+ L+ +V + V
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303
Query: 392 TWNEIEAG 399
T+ + G
Sbjct: 304 TYTTLIGG 311
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 11/295 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +SI +N L + + LE + R N I + +A + +
Sbjct: 371 DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M E V ++ L+ Y + R+ F GI PD +Y+ +++ C
Sbjct: 431 ELMKEVSCTPDVVTYSTLI------DGYCKANRMQDAF-AILGISPDKASYSSMLEGLCS 483
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++ M ++ P +S + ++ G E+ ++ K+LQ+M G + +
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYT 543
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y++ I+ LCK ++ +A +LD ML KG P+ TY+ I GFCK + A + ++ M
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN----FTTMKSLVT 364
+SG P+ Y ++ C+ G+ E A+ + + KG P+ F+ M+SL T
Sbjct: 604 DSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTT 658
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 21/334 (6%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFH 113
+++E A ++P D + ++ ++ L +A + LE E PD+
Sbjct: 323 RVMEDMFKAGISP----DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT---- 374
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+SI++ G + + A + M E + ++ FN ++ A E +V +E
Sbjct: 375 -YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV-LEL 432
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K PD+ TY+ +I +C+++ A++IL I P+ +S+ +++ G K
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGK 486
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E+ +V+ +M + G S Y + I LC + + EA +L M +G +PN TYS
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G CK E+A +M G P+ + Y +++ CK + A K G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
P+ L++G + V +A E++ L+ EK
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
YS E KP+ S++GAL+ GF + + V ++ M V +N +
Sbjct: 8 GYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILK 67
Query: 260 SLCKLRKCAEAKALLDEMLS--KG---MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ C++ LD LS +G P + TY I+G C+ +EA + M
Sbjct: 68 AYCQIGD-------LDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
P+++VY ++ +CK G + A K + + VP+ T SL+ G + + E
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 375 AKELIGLVKEK-FTKNVDTWNEIEAGL 400
A++L+ +KE T + +N + GL
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGL 207
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E + E S KP++ TY I GF + GN + + M SP+ + T++
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 329 YFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKF 386
C+ GD + AL + K W P T L+ GL ++ EA +L+ ++++
Sbjct: 67 KAYCQIGDLDRALSHFR---GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 387 TKNVDTWNEIEAGL 400
+ +N + AGL
Sbjct: 124 HPDAAVYNCLIAGL 137
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 4/278 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E L P N R H I+ Q + + A + F EM+ + ++ L+ L
Sbjct: 141 MERLGCTP---NRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A E ++F + GI P TYN VI C + A + M K +P+
Sbjct: 198 AGKLNEAYKLFQRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRF 256
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+F L+ K K ++ ++L+ M G V Y+ I LC + + +A+ LL++M
Sbjct: 257 TFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ + KP VT + I+G CK G +EA++ M +SG SP+ Y T+V+ C+ G
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E A + +A+G PN T +LV+GL A+++ EA
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
+ +TP + +A++ I+ L AN F+ + ++ R + + I +
Sbjct: 39 SGVTPST----VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 94
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A K+M E V +N ++ L + +E +F E + G P+ ++
Sbjct: 95 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER-LGCTPNRRSH 153
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ S A + EM+ K I P++ S+G L+ G K K + K+ Q M
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLD 213
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ YNV IH +C EA L M SKG +P+ T++ I CK G +E
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDE 273
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + + M++ G P+ Y T++ +C + A ++ + + P T +L+
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
GL A ++ EA+E++ +V + +V T+N + G
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 5/309 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
+R + + I L + + + Q E++ + D+ + + ++ I++ G +A A +
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEAK-DIPPDSW-SYGILIDGLAKAGKLNEAYK 206
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F+ M + + S +N ++ + +A E +F ++ G +P T+N +I A
Sbjct: 207 LFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAH 265
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A+ +L M P+ ++ L++G + +D +L+ M + K V
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
N IH LCK + EA+ +LD M+S G P+ VTY+ ++G C+ G E A++
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M GL+PN Y +V +CK A G + + G PN T +L+ G A +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 372 VSEAKELIG 380
V +L G
Sbjct: 446 VDGGLKLFG 454
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 9/325 (2%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D ++ I I+ L++A N + Q + + P H + L A + A+
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL---AYTLDEAL 240
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FK M R S FN L+ A E R+ G PD+ TY+ +I
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD-GHVPDVVTYSTLISG 299
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + A +L +M ++ KP + L+ G K + ++ +VL M G
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN +H C+ + A+ LL +M+++G+ PN VTY+ + G CK EA +
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M +SG +PN Y ++ C G + L E + G P+ +L L +
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Query: 371 KVSEAKELIGLVKEKFTKNVDTWNE 395
+ + A E++ +E + W +
Sbjct: 480 RSARALEILREGRESLRS--EAWGD 502
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD +Y +I ++ + A ++ ++ + P+ ++ +L+ G ++D
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M R G YNV I + CK EA L+ +M+ G P+ VTY+ + G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK EEA + M G +PN + T++ +C+ + A E AK P+
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ L+ GLA A K++EA +L ++ T + T+N + G+
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ +++ P++ S+G L+ G K K D + Q + G+ Y IH LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A+ L +M +G P+ VTY+ I CK G EEA + M G P+ Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ +CK E AL E G PN + +++ GL SK+ +A ++ E
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF---HEME 177
Query: 387 TKNV--DTWN 394
K++ D+W+
Sbjct: 178 AKDIPPDSWS 187
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 7/261 (2%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + ++ L+ L A + + +F + + G+ P Y +I C ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS-GVTPSTVAYTSLIHGLCMAN 59
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + A+M+R+ P+ ++ ++ K E+ +++ M G V YN
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LCK + EA L +EM G PN +++ I G C+ ++A + + M
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ P+S Y ++ + K G A + + G P+ T ++ G+ A + EA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 376 KELI------GLVKEKFTKNV 390
EL G +FT N+
Sbjct: 240 LELFKSMRSKGCRPSRFTFNI 260
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 73/213 (34%), Gaps = 45/213 (21%)
Query: 105 PDLQ--NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PD+ N H H +A TE A +M L +V + AL+ L A
Sbjct: 358 PDVVTYNTLVHGHC-----RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E VF + K+ G P+L TY +I FC + + EM I P+ +G L
Sbjct: 413 EACGVFAQM-KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 223 VA-------------------------------------GFYKEEKYEDVNKVLQMMERY 245
A G + K E ++ M R
Sbjct: 472 AAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRG 531
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
G + LCK + EA+A+L+E++
Sbjct: 532 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ TYN +I C++S + A +L EM + + P+ +F +++ G K K+E +
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L +M + YN I LCK + AK L+DE +S G P+ VTYS G
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +EA + + MS G +PN Y T++ +CK E A + ++ G+VP+
Sbjct: 377 CKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +V GL ++ +A +++ G++K T +V T+ + GL
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 131 RTFKEMDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+ F +D+ K+R V + L A K+ +F P PD YN +
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS-----PDAIAYNAI 232
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C +D A L EM+ + + P+ ++ L+ G K K + +++L M G+
Sbjct: 233 IHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV 292
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+N + LCK K A +LL M + +P+ TY+ I G CK N + AK
Sbjct: 293 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKD 352
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+SG P+ Y + +CK G + A KE KG PN T +L+ GL
Sbjct: 353 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLC 412
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
ASK +A EL+ LV F +V T+ I GL
Sbjct: 413 KASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 6/278 (2%)
Query: 114 AHSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
A++ I++G N + A+ KEM+E K+ V +N L+ L A + + E
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G+ PD T+N ++ C++ A+S+LA M ++ +P+ ++ L++G K++
Sbjct: 288 VDR-GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ ++ G V Y++ LCK + EA L+ EM KG PN VTY+
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G CK E+A + + +SG P+ Y +V +CK G + AL + + +G
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
P+ T +L+ GL +V EA + KE +K+
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIF---KEMVSKD 501
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 152/331 (45%), Gaps = 13/331 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEH 128
D +A++ I+ N +G ++L+E+ R PD+ ++I++ G +A+ T+
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDV-----FTYNILIDGLCKASKTDK 279
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A EM + + FN+++ L A ++ + + +P TYN +I
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER-NCRPSCCTYNTLI 338
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + A ++ E P+ ++ L G K + ++ ++++ M G
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT 398
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I LCK K +A LL+ ++S G P+ VTY+ + G CK+G ++A K
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 458
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M G +P+ Y ++ +C+ G + A KE ++K + SLV G
Sbjct: 459 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 518
Query: 369 ASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+S+ EA++++ ++ T +D +N + G
Sbjct: 519 SSRTKEAQKVVDGIRG--TPYIDVYNALMDG 547
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 33/306 (10%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F + +HS N L L + +F E G PD TY+
Sbjct: 107 QTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMF-ERMLDAGYAPDSYTYHL 165
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV-------- 238
VIK+ C+ + A+++L + + KP S + L F K + +D ++
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPD 225
Query: 239 -----------------------LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
L+ M + V YN+ I LCK K +A +L
Sbjct: 226 AIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLH 285
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM+ +G+ P++VT++ + G CK G FE A +M+ P+ Y T++ +CK
Sbjct: 286 EMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQ 345
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ + A E ++ G+VP+ T L GL ++ EA EL+ + K T N+ T+N
Sbjct: 346 NVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYN 405
Query: 395 EIEAGL 400
+ GL
Sbjct: 406 TLIDGL 411
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 11/311 (3%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
+ I E++ R + N ++I++ G + + A + M V ++
Sbjct: 554 LDEIPNVFEDMACRGCVPN--IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N ++ L A KE ++V + + GI PD TYN ++ FC+ A IL M
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 670
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG-MKSGVSMYNVRIHSLCKLRKC 267
+ + P+ ++ L++G + + D +++ M R G + S + YN I LCK
Sbjct: 671 KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCL 730
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A L+D M G++ N+VTY+ FI CK+G +EA ++S + Y T+
Sbjct: 731 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS---LLSEMDTLRDEVSYTTV 787
Query: 328 VYFMCKGGDYETALGFCKESIA-KGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEK 385
+ +CK + A +E +A KG T L+ ++ EA L+GL V+
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847
Query: 386 FTKNVDTWNEI 396
+ +V T+N +
Sbjct: 848 CSPSVITYNMV 858
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 161/363 (44%), Gaps = 32/363 (8%)
Query: 22 LATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIA 81
+ T SIL+ G L + + A L+K S TP + + ++
Sbjct: 366 VVTYSILADG----LCKRGRIDEAFELVKEMS----------GKGCTP----NLVTYNTL 407
Query: 82 INKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEHAVRTFKEM 136
I+ L +A+ + LE L + PD+ ++II+ G + + A++ + M
Sbjct: 408 IDGLCKASKTEKAYELLESLVSSGFVPDVVT-----YTIIVDGLCKEGRLDKALKMVEGM 462
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ SV + AL+ L E +F E + D Y ++ +C+SS
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM-VSKDCTADALAYVSLVNGYCKSSR 521
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A ++ D P + AL+ G+ KE + +++ V + M G + YN+
Sbjct: 522 TKEAQKVV---DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 578
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ LCK K EA L+ M S G P+ V+Y+ I G K +EA++ M +G
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+ P++ Y T++ CK ++ A+G K I G P+ T +L++GL+ +++ +A
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 377 ELI 379
EL+
Sbjct: 699 ELM 701
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y VI C++ A + EM K + + +F L+ F K ++ ++ +L +
Sbjct: 783 SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGL 842
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + G V YN+ I LCKL K +A L DEM +G+ +SV+Y+ IYG C G
Sbjct: 843 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 902
Query: 302 FEEAKKFYRIMSNS 315
+EA + M++S
Sbjct: 903 GKEALQVLEEMASS 916
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G++ + TYN I C+ A S+L+EMD + S+ ++ G K E+ +
Sbjct: 743 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDR 799
Query: 235 VNKVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+K+ +M+ G+ +N+ I + K ++ EA LL M+ +G P+ +TY+ I
Sbjct: 800 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVI 859
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
CK ++A + + M+ G+ +S Y ++Y +C G + AL +E
Sbjct: 860 TCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEE 912
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 7/317 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D L + + +L + + +EE+ TR ++ + F ++ +L G Q E A
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAF-IYNFVLSGLCQEEKVEEARL 170
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F++M + ++ +V +N L+ L A + +F E G P +YN +I F
Sbjct: 171 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGF 229
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ D +A + +M R + PN ++ L+ G K K + +VL M + G+ V
Sbjct: 230 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 289
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ Y+ I CK+R+ EA LL++M+++G+ P VTY+ + C+ E+A K +R
Sbjct: 290 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 349
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M+ P Y T++ +C + A E IAKG P+ T +L GL A K
Sbjct: 350 MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGK 409
Query: 372 VSEAKELIGLVKEKFTK 388
V EA+EL + K K TK
Sbjct: 410 VHEAQEL--MEKMKLTK 424
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 1/217 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD TY +++ C++ A + + EM + IKP+A + +++G +EEK E+ +
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + + V YN I+ LCK + A L EM KG P V+Y+ I GFCK
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ AK + M S PN Y T++ + K G + A + KG PN T
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
L+ G +V EA +L+ +V + V T+N
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 328
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 35/259 (13%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P T+N V F ++ + M AS +G L++ K +++
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL---------------------- 274
K+L M K Y+ I+ LCKL + EA+ L+
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLC 125
Query: 275 ------------DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+EM ++G+KP++ Y+ + G C++ EEA+ + M ++PN
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-L 381
Y T++ +CK ETA KE KG+VP + +L+ G + AK++ +
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245
Query: 382 VKEKFTKNVDTWNEIEAGL 400
V+ NV T+ + GL
Sbjct: 246 VRSNCVPNVVTYTTLIDGL 264
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + + P A++F + GF K + E V +V Q M G S Y + I LCK+
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA LL M K K ++ YS I CK EEA++ M+ P++ Y
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
+V +CK + AL +E +G P+ +++GL KV EA+ L +VK++
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 386 FTKNVDTWNEIEAGL 400
NV T+N + GL
Sbjct: 180 INPNVVTYNTLINGL 194
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A FKEM + ++N L+ KD K VF + ++ + P++ TY
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV-PNVVTYTT 259
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +S +A +L M +K + PN +++ L+ GF K + ++ +K+L+ M G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319
Query: 247 MKSGVSMYNVRIHSLCKL---------------RKCAE--------------------AK 271
+ V YN+ ++SLC+ R+C A
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
L EM++KG P+++TY +G + G EA++ M + +P
Sbjct: 380 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
SV A+NA+LLAL+ A R F + + G+ P++ TYN +++A C A S+
Sbjct: 122 SVLAYNAVLLALSDAS--LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M PNA ++ LVA F + + + +++ MM G+K + +N ++ +CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +A+ + DEM+ +G+ P+ V+Y+ + G+CK G EA + M+ G+ P+
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ ++++ MCK G+ E A+G +E +G N T +L+ G
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDG 341
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F M + +V +N L+ AL KE V + + G P+ TYN ++
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDM-RGAGCDPNAVTYNTLV 199
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AFC + + A ++ M +KPN +F ++V G K + ED KV M + G+
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA 259
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + CK+ EA ++ EM KG+ P+ VT++ I+ CK GN E A
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M GL N + ++ CK G + AL +E P+ +L+ G
Sbjct: 320 VREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCM 379
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
++ EA+EL+ ++ K K +V T++ I
Sbjct: 380 VGRMDEARELVREMEAKGVKPDVVTYSTI 408
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A + F EM + L ++N L+ E VF E + GI PD+
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK-GIMPDV 297
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+ +I C++ + A ++ EM + ++ N +F AL+ GF K+ +D ++
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + ++ V YN I+ C + + EA+ L+ EM +KG+KP+ VTYS + +CK+G+
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417
Query: 302 -----------------------------------FEEAKKFYRIMSNSGLSPNSSVYFT 326
+A ++ M + GL P+ Y +
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ CK G+ E AL E + G +P+ T L+ GL+ +++ EA+ L+
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ + +A + E++ R NE I + + + A+
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + +++ SV +NAL+ + E + + E + G+KPD+ TY+ ++ A+C+
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM-EAKGVKPDVVTYSTILSAYCK 414
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ D+ SA+ + +M + P+A ++ +L+ +E++ D + + + M G++
Sbjct: 415 NGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVT 474
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG------------------ 295
Y I CK A +L DEM+ G+ P+ VTYS I G
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534
Query: 296 --------------------------------FCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
FC G EA K Y+ + + + + SV
Sbjct: 535 HEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSV 594
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C+ G+ AL F K+ + G+ PN T+ SL+ GL V EA ++I
Sbjct: 595 YSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVI 650
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 118/310 (38%), Gaps = 58/310 (18%)
Query: 98 LEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+E +PD+ +S IL Y + T A + ++M E+ + +++L+ L
Sbjct: 393 MEAKGVKPDVVT-----YSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVL 447
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
K + +F + G++PD TY +I C+ + A S+ EM + + P+
Sbjct: 448 CEEKRLGDAHVLFKNM-ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPD 506
Query: 216 ASSFGALVAGF----------------YKEE------KYE---------DVNKVLQMMER 244
++ L+ G Y EE KY+ ++ VL +++
Sbjct: 507 VVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKG 566
Query: 245 YGMKSGV-------------------SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ MK + S+Y+V IH C+ +A + +ML G PN
Sbjct: 567 FCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPN 626
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
S + I G + G EA + + + N ++ ++ K G+ + L
Sbjct: 627 STSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLH 686
Query: 346 ESIAKGWVPN 355
G +P+
Sbjct: 687 GMARDGLLPS 696
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 17/366 (4%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGIS 95
++ +D+ AAL + +S+PE L + +A + + + KL A F+ +
Sbjct: 53 ISDQDRLLAAL---REQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLME 109
Query: 96 QYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVR-TFKEMDEHK--LRHSVGAFNAL 151
+ E++ R Q S + Y + + AV ++D ++ FN L
Sbjct: 110 GLVREMR-REGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHL 168
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
L L K ++ V+ E GI+PD+ T N +IKA C + +A +L EM
Sbjct: 169 LNVLVEGSKLKLLESVYNEM-TGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG 227
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ P+ ++F L+ GF +E E +V +MME +GV++ NV I+ CK+ + +A
Sbjct: 228 VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV-NVLINGYCKMGRVEDA 286
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ + ++ G +P+ VTY+ F++G C++G+ A K +M G P+ Y T++
Sbjct: 287 LGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 346
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKE 384
+ K G+ + A G + + +G +P+ TT +L+ L+ +++ EA +L GL +
Sbjct: 347 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406
Query: 385 KFTKNV 390
+T N+
Sbjct: 407 VYTFNI 412
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 1/281 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ IN LS+ + + ++ R L + I+ N E A+
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+E+ L V FN L+ AL D R+F E K+ G PD TYN +I C
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCS 454
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+A +L EM+ + ++ ++ K+ + E+ +V M+ G+
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I LCK ++ +A L+++M+ +G++PN++TY+ + +CK GN ++A M+
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+G + Y T++ +CK G + AL + KG P
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 615
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L++AL+ +E + E G+ PD+ T+N +I A C+ D + EM
Sbjct: 375 FNTLIVALSSQNRLEEALDLAREL-TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
P+ ++ L+ K + +L ME G YN I +LCK +
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ + D+M ++G+ ++VT++ I G CK ++A + M GL PN+ Y ++
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSI 553
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ CK G+ + A + A G+ + T +L+ GL A + A +L+
Sbjct: 554 LTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLL 605
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 152/327 (46%), Gaps = 13/327 (3%)
Query: 46 LTLLKSESNPEKILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L S++ E+ L++ R L+P+ + F+I IN L + + + EE+K
Sbjct: 379 IVALSSQNRLEEALDLARELTVKGLSPDVY----TFNILINALCKVGDPHLGIRLFEEMK 434
Query: 103 TRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+ +E ++I++ +M + +A+ EM+ + S +N ++ AL
Sbjct: 435 SSGCTPDEV--TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+E + VF + GI T+N +I C++ A ++ +M ++ ++PN ++
Sbjct: 493 IEEAEEVFDQM-DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYN 551
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+++ + K+ + +L+ M G + V Y I+ LCK + A LL M K
Sbjct: 552 SILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 611
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YET 339
G++P Y+ I + N +A +R M+ G P++ Y + +C+GG +
Sbjct: 612 GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKE 671
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGL 366
A F E + KG++P F++ + L GL
Sbjct: 672 AFDFLVEMVNKGFMPEFSSFRMLAEGL 698
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN VI ++ + A I+ +M + P+ ++F L+ + + E+
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + + G+ V +N+ I++LCK+ L +EM S G P+ VTY+ I
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G A M ++G ++ Y T++ +CK E A + A+G +
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
T +L+ GL A ++ +A ELI +VKE N T+N I
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSI 553
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 3/307 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D + F+ +N L E + + E+ R +Q + +++I +A+ AV
Sbjct: 161 DTVVFNHLLNVLVEGSKLKLLESVYNEMTGR-GIQPDVVTLNTLIKALCRAHQVRTAVLM 219
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM H + F L+ + RV + + G P T N +I +C
Sbjct: 220 LEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEA-GCSPTGVTVNVLINGYC 278
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + + +P+ ++ V G + KV+ +M + G V
Sbjct: 279 KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF 338
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I+ L K + EAK ++++M+ +G P++ T++ I EEA R +
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ GLSP+ + ++ +CK GD + +E + G P+ T L+ L K+
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458
Query: 373 SEAKELI 379
A +L+
Sbjct: 459 GNALDLL 465
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 147/311 (47%), Gaps = 4/311 (1%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKE 135
A+S + L++A + S +E+ R +R + +IL QA + A FK+
Sbjct: 117 AYSSLVRALAKARRVDHASSLFDEM-IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQ 175
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M +H + +V +N LL L + ++ +F E K++ PD+ TYN ++ A C++
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM-KSHSCSPDVVTYNTLLDAVCKAR 234
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ M PN +F L+ G + + E +V M G K Y
Sbjct: 235 RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN- 314
I LC+ K +A+ L ++M + P++V Y+ I G+CK G+ +EA+K YR MS
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+GL P + T++ CK G A E KG + T + L+ GL+ A+K+ E
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414
Query: 375 AKELIGLVKEK 385
A E+ ++EK
Sbjct: 415 ALEVYKQMREK 425
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 146/329 (44%), Gaps = 3/329 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++ I I+ L++ + + L E+ R + + ++ + +A +HA F
Sbjct: 79 DNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLF 138
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM F L+L L A K+ F + PK +G +P++ YN ++ C
Sbjct: 139 DEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK-HGCQPNVPVYNVLLHGLCS 197
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A ++ AEM S P+ ++ L+ K + E+ K+ + M G V
Sbjct: 198 SGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVIT 257
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
++ IH LC+ + +A + ML G KPN TY+ I G C+ +A++ + M+
Sbjct: 258 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-SIAKGWVPNFTTMKSLVTGLAGASKV 372
+ + P++ Y +++ CK G + A +E S G P T +L+ G K+
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377
Query: 373 SEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
A EL+ + K + T+ + AGL
Sbjct: 378 GRANELVAEMGTKGLAADSCTYRILIAGL 406
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 10/285 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ ++N E A ++ M E + +++ L+ L E ++ E G P
Sbjct: 55 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM-VMRGQTP 113
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ Y+ +++A ++ A S+ EM R P+ F L+ G + K +D ++
Sbjct: 114 SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF 173
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M ++G + V +YNV +H LC + +A L EM S P+ VTY+ + CK
Sbjct: 174 KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA 233
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
EE K + M +G PN + T+++ +C+ G+ E AL + G PN T
Sbjct: 234 RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 293
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIEAG 399
+L++GL A KV +A+EL EK T+ + +N + AG
Sbjct: 294 TTLISGLCRAEKVIQARELF----EKMTQACIPPDAVAYNSLIAG 334
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 8/308 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEH 128
H DRL F I L +A S+ +++ +P++ H + GQ E
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQ---LEQ 203
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM H V +N LL A+ A+ +E ++F E + G P++ T++ +I
Sbjct: 204 ANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF-EAMRAAGYVPNVITFSTLI 262
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + + A + M KPN ++ L++G + EK ++ + M + +
Sbjct: 263 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIP 322
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLS-KGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
YN I CK EA+ L EM G++P VT++ I GFCK G A +
Sbjct: 323 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANE 382
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M GL+ +S Y ++ + + + AL K+ K ++ + + S V GL
Sbjct: 383 LVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC 442
Query: 368 GASKVSEA 375
+ +A
Sbjct: 443 KTGNIDQA 450
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ +N V++ F S++ A + M KP+ S+ L+ G K K ++
Sbjct: 40 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 99
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+L M G + Y+ + +L K R+ A +L DEM+ G P+ + + I G
Sbjct: 100 LKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILG 159
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G ++A + ++ M G PN VY +++ +C G E A E + P+
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T +L+ + A +V E +L ++ + NV T++ + GL
Sbjct: 220 VVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGL 265
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 6/253 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+ E RAA P + + FS I+ L + + N+ +
Sbjct: 241 KLFEAMRAAGYVP----NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 296
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I +A A F++M + + A+N+L+ E ++++ E G
Sbjct: 297 ISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 356
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P + T+N +I FC+ A ++AEM K + ++ ++ L+AG + K ++
Sbjct: 357 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEAL 416
Query: 237 KVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V QM E+ + VS + + LCK +A A+ + G PN T+
Sbjct: 417 EVYKQMREKKFLLDPVSCVSF-VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 475
Query: 296 FCKDGNFEEAKKF 308
K G E+A+K
Sbjct: 476 LIKLGRVEDAQKL 488
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 12/321 (3%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
NK SEA + Q ++ +PDL + + G ++ A+ K+M++ K+
Sbjct: 199 NKASEAVAL--VDQMVQR-GCQPDLVTYGAVVNGLCKRGDIDL---ALSLLKKMEKGKIE 252
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPK--TYGIKPDLDTYNRVIKAFCESSDSSSA 200
V +N ++ L YK + F F K T GI+PD+ TYN +I C S A
Sbjct: 253 ADVVIYNTIIDGLC---KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDA 309
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+L+ M + I PN +F AL+ F KE K + K+ M + + + Y+ I+
Sbjct: 310 SRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
C + EAK + + M+SK PN VTY+ I GFCK EE + +R MS GL N
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ Y T++ + + GD + A K+ ++ G P+ T L+ GL K+ +A +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
L K K ++ T+N + G+
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGM 510
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 9/318 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ L + + + +++T RPD+ + YG+ + A
Sbjct: 254 DVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWS---DAS 310
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R M E K+ +V F+AL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLING 369
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K PN ++ L+ GF K ++ E+ ++ + M + G+
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I L + C A+ + +M+S G+ P+ +TYS + G CK G E+A +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ S + P+ Y M+ MCK G E FC S+ KG PN ++++G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPNVIIYTTMISGFCRK 548
Query: 370 SKVSEAKELIGLVKEKFT 387
EA L +KE T
Sbjct: 549 GLKEEADALFREMKEDGT 566
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F EM + + S+ FN LL A+ K + V + E + I DL +YN
Sbjct: 62 DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLG-ERMQNLRISYDLYSYNI 120
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S A ++L +M + +P+ + +L+ G+ ++ D ++ M G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K +N IH L K +EA AL+D+M+ +G +P+ VTY + G CK G+ + A
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + + +Y T++ +CK + A + KG P+ T SL++ L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300
Query: 367 AGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T++ +
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSAL 331
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+N +I + +S A +++ +M ++ +P+ ++GA+V G K +
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME+ +++ V +YN I LCK + +A AL ++M +KG++P+ TY+ I
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A E I + P+
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAG 399
T SL+ G ++ EAK + L+ K NV T+N + G
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V +N L+ AK +E +F E + G+ + TYN
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNT 435
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I +M + P+ ++ L+ G K K E V + +++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN + Y+ I GFC+ G EEA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G P+S Y T++ + GD + KE + G+V + +T+ ++ L
Sbjct: 556 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + + EM + + + +++L+ + E K +F E + P++ TYN +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 401
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IK FC++ + EM ++ + N ++ L+ G ++ + K+ + M G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y++ + LCK K +A + + + M+P+ TY+ I G CK G E+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +S G+ PN +Y TM+ C+ G E A +E G +P+ +L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581
Query: 368 GASKVSEAKELI 379
+ + ELI
Sbjct: 582 RDGDKAASAELI 593
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E + F+EM + L + +N L+ L A D +++F + G+ P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ ++ C+ A + + + ++P+ ++ ++ G K K ED +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K V +Y I C+ EA AL EM G P+S Y+ I +D
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 583
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+ + + + M + G ++S +MV M G E
Sbjct: 584 GDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLE 621
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K +A L EM+ P+ V ++ + K F+ M N +S + Y
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
++ C+ AL + + G+ P+ T+ SL+ G + ++S+A L+ +V+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 385 KFTKNVDTWNEIEAGL 400
+ + T+N + GL
Sbjct: 180 GYKPDTVTFNTLIHGL 195
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 7/288 (2%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I+L G ++N E A + M E +NAL+ + AKD+ + + E K
Sbjct: 46 AILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK 105
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ + P + TY ++ C++ + A +L EM K PN ++ +V G +E K +
Sbjct: 106 NHCL-PTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLD 164
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ K+L+ M G V YN I LCK + EA+ L M + P+ V+Y+ I
Sbjct: 165 EAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVI 221
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G CK G+ + A + MSN G +P+ Y +++ CKGG+ E A+G + G
Sbjct: 222 NGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCR 281
Query: 354 PNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
PN SL+ L + +A++ L+ + + FT +V ++N GL
Sbjct: 282 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 13/313 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ IN L ++ + S+ L+ + R + ++ I + + E A+
Sbjct: 213 DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 272
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + R ++ A+N+LL AL + + + +E + G PD+ +YN I C+
Sbjct: 273 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR-GFTPDVVSYNACIDGLCK 331
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVA----------GFYKEEKYEDVNKVL-QMM 242
+ A ++ M + PNASS+ L+ G K ++++ + +++
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ + V YNV + S CK R+ +A + +ML K N VT++ ++G C D
Sbjct: 392 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRL 450
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+A+ M + G P+ Y T+V MCK G AL +E++ G VP+ T +L
Sbjct: 451 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 510
Query: 363 VTGLAGASKVSEA 375
+TGL + EA
Sbjct: 511 ITGLVHENMAEEA 523
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 151/338 (44%), Gaps = 19/338 (5%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ ++ ++ L +A + L+E++ + N + +++I+ G + + A +
Sbjct: 113 VTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPN--IYTYNVIVEGLCEERKLDEAKKML 170
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM V +N+ + L E ++ P T PD+ +Y VI C+
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDVVSYTTVINGLCK 226
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S D SA +L M + P+ ++ +L+ GF K + E +L M + G + +
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + +L +L +A+ +L EM +G P+ V+Y+ I G CK ++AK + M
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346
Query: 314 NSGLSPNSS----------VYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSL 362
G +PN+S +Y ++ +CKGG ++ A F K K P+ +
Sbjct: 347 ERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 406
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ ++ +A ++ + EK NV TWN + GL
Sbjct: 407 LDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGL 444
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN+++ A ++ EM KS +P+A +F L+ G + + E K+L M
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G ++YN I K + +A L EM+ P VTY++ + G CK
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+A K M + G SPN Y +V +C+ + A +E +G+ P+ T S
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ GL +V EA++ L + T +V ++ + GL
Sbjct: 189 IKGLCKCDRVDEARKF--LARMPVTPDVVSYTTVINGL 224
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 169/369 (45%), Gaps = 42/369 (11%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDR---LAFSIAINKLSEANYFNGISQYLEELKT 103
+LL+ + +P+ L + + P R L + + I KL A F+ + Q L + KT
Sbjct: 16 SLLRLQEDPKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFHEMEQILLQFKT 75
Query: 104 RPDL-QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+ L E + I YG+A + ++A++ F EM ++ + ++ ++N LL L I K++
Sbjct: 76 QTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTLLNVLMICKEFD 135
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
++ F+ + +KPD T+N +I+ C A +L EM + + PN +FG L
Sbjct: 136 VMREHFVNIKRH--VKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTL 193
Query: 223 VAGFYKEEKYED--------VN----------------------------KVLQMMERYG 246
+ G K ++ VN ++ + MER G
Sbjct: 194 IYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDG 253
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K ++Y+ I L K+ + E +L EM KG K ++VTY+ I GFCKD +FE A
Sbjct: 254 VKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAY 313
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K M + P+ Y ++ +CK G + A ++ +G P+ + + + GL
Sbjct: 314 KILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGL 373
Query: 367 AGASKVSEA 375
+ A + +A
Sbjct: 374 SDAMEFKDA 382
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A++ EM L + F L+ L + KE ++ +G+ P+ Y
Sbjct: 168 VDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYA 227
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+IK C + S A + EM+R +K +++ + L++G +K + ++V VL ME
Sbjct: 228 TLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELK 287
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K+ YNV I+ CK + A +LDEM+ KP+ ++Y+ + CKDG + EA
Sbjct: 288 GCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEA 347
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M G +P+ Y + + +++ A E + KG+ P +++ +
Sbjct: 348 SDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINR 407
Query: 366 LA 367
L
Sbjct: 408 LC 409
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 20/316 (6%)
Query: 32 DKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHL--------DRLAFSIAIN 83
D+ PL +T +KS + +L IC+ + E + D F+I I
Sbjct: 107 DEMPLYRCQRT------IKSYNTLLNVLMICKEFDVMREHFVNIKRHVKPDGCTFNIMIR 160
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA-NMTEHAVRTFKE--MDEHK 140
L + + L+E+K R + N+ ++YG N+ K+ ++ H
Sbjct: 161 GLCSDGRVDDALKVLDEMKNRDLVPNQV--TFGTLIYGLCLNLKLKEAFKLKDYMVNVHG 218
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L + + L+ L + R+ E + G+K D Y+ +I +
Sbjct: 219 LCPNEYVYATLIKGLCAVGELSFALRLKEEMERD-GVKVDSAIYSTLISGLFKVGRKDEV 277
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ +L EM+ K K + ++ ++ GF K++ +E K+L M K V YNV +
Sbjct: 278 FGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGE 337
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK K +EA L ++M +G P+ V+Y G F++A M G +P
Sbjct: 338 LCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPR 397
Query: 321 SSVYFTMVYFMCKGGD 336
SS + +C+ GD
Sbjct: 398 SSSICKFINRLCQNGD 413
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 134/257 (52%), Gaps = 3/257 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
SV A+NA+LLAL+ A R F + + G+ P++ TYN +++A C A SI
Sbjct: 155 SVLAYNAVLLALSDAS--LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M PN ++ LVA F++ + + +++ MM G+K + +N ++ +CK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A+ + DEM+ +G+ P+ V+Y+ + G+CK G EA + M+ G+ P+
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
+ ++++ MCK G+ E A+ ++ +G N T +L+ G + +A + G+
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392
Query: 383 KEKFTKNVDTWNEIEAG 399
+ + +V +N + G
Sbjct: 393 QCRIKPSVVCYNALING 409
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ + +A + +++ R NE I + + + A+
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 388
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M + +++ SV +NAL+ + E + + E + G+KPD+ TY+ +I A+C+
Sbjct: 389 RGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCK 447
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ D+ SA+ + +M K + P+A ++ +L+ E++ D + + + M + G++
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFT 507
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG------------------ 295
Y I CK A +L D+M+ G+ P+ VTYS I G
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 567
Query: 296 --------------------------------FCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
FC G EA K Y+ M + + + SV
Sbjct: 568 HEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 627
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C+ G+ AL F K+ + G+ PN T+ SL+ GL V EA ++I
Sbjct: 628 YSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 154/325 (47%), Gaps = 7/325 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E+++ + R L P + + F+ +N + +A + +E+ R L + +
Sbjct: 245 ERLVGMMREGGLKP----NLVTFNSMVNGMCKAGKMEDARKVFDEM-VREGLAPDGVSYN 299
Query: 116 SIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
+++ Y +A + A+ F EM + + V F +L+ + A + + + + +
Sbjct: 300 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM-RE 358
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++ + T+ +I FC+ A + M + IKP+ + AL+ G+ + ++
Sbjct: 359 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDE 418
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L ME G+K V Y+ I + CK A L +ML KG+ P+++TYS I
Sbjct: 419 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 478
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
C + +A ++ M GL P+ Y +++ CK G+ E+AL + + G +P
Sbjct: 479 VLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
+ T L+ GL+ +++ EA++L+
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQQLL 563
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F M + +V +N L+ AL KE + + + G P++ TYN ++
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDM-RGAGCGPNVVTYNTLV 232
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AF + + A ++ M +KPN +F ++V G K K ED KV M R G+
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA 292
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + CK EA ++ EM KG+ P+ VT++ I+ CK GN E A
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M GL N + ++ CK G + AL + P+ +L+ G
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
++ EA+EL+ ++ K K +V T++ I
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTI 441
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 43/310 (13%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L G+ + E A+ ++M +V +N L+ A A + +R + + G+K
Sbjct: 200 LCGRGHRKE-ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER-LVGMMREGGLK 257
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+L T+N ++ C++ A + EM R+ + P+ S+ LV G+ K + V
Sbjct: 258 PNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSV 317
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M + G+ V + IH +CK A L+ +M +G++ N VT++ I GFCK
Sbjct: 318 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK 377
Query: 299 DG-----------------------------------NFEEAKKFYRIMSNSGLSPNSSV 323
G +EA++ M GL P+
Sbjct: 378 KGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVT 437
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL----- 378
Y T++ CK D +A ++ + KG +P+ T SL+ L G ++S+A L
Sbjct: 438 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMI 497
Query: 379 -IGLVKEKFT 387
+GL ++FT
Sbjct: 498 KLGLQPDEFT 507
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL------------- 222
G+ PD+ TY+ +I +S+ + A +L ++ + P + + AL
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594
Query: 223 --VAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ GF + + +KV Q M++R G S+Y+V IH C+ +A + +ML
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDG-SVYSVLIHGHCRAGNVMKALSFHKQMLQ 653
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
G PNS + I G ++G EA + + + N
Sbjct: 654 GGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 688
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D Y+ +I C + + A S +M + PN++S +L+ G ++ + ++V+
Sbjct: 624 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q + Y C L +KAL+D L++G N ++G KD
Sbjct: 684 QQLLNY----------------CSLADAEASKALIDLNLNEG---NVDAVLDVLHGMAKD 724
Query: 300 G 300
G
Sbjct: 725 G 725
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 140/281 (49%), Gaps = 3/281 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKRVFIEFPKTYGIKP 179
+ N+ A+ + V ++NA+L A+ K K + +F E ++ G+ P
Sbjct: 143 ARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSP 201
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN +I+ FC + + EM+R PN ++ ++ + K K + K+L
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++M G+ + YNV I+ LC+ + E +L+EM + P+ VT++ I G+C
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GNF +A + M +GLSPN Y T++ MCK G+ A+ F + +G PN T
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+L+ G + + +A +++ +V+ FT + T+N + G
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 6/341 (1%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L + L P + +++++ IN L S+ LEE+ R + +
Sbjct: 259 KLLRLMALKGLNP----NLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y A+ EM ++ L +V + L+ ++ A + F++ + G
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME-FLDQMRDRG 373
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ TY +I F + AY I+ EM P ++ AL+ G + ED +
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+LQ M G V Y+ I C+ ++ +A L EM++KG+ P+ TYS I G
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK E ++ M + GL P+ Y +++ C GD + AL E I KG+ P+
Sbjct: 494 CKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553
Query: 357 TTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEI 396
T L+ G S+ EAK L+ L+ E+ N T+N +
Sbjct: 554 VTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FKEM E + +V +N L+ A + + F E + G P++ TYN +I A+C
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERN-GCLPNVVTYNTIIDAYC 249
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ +L M K + PN S+ ++ G +E + ++ +++L+ M +
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I+ C + +A L EM+ G+ PN VTY+ I CK GN A +F M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ GL PN Y T++ + G + A KE + G+ P T +L+ G ++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+A L+ +++ F +V +++ I +G
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISG 457
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +A N ++L++++ R N R + I + Q + A + KE
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E+ ++ +NAL+ I ++ + E + G PD+ +Y+ +I FC +
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFCRNQ 462
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A+ + EM K I P+ +++ +L+ G K+ + +V + Q M G+ Y
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I++ C +A L DEM+ KG P+ VTY+ I GF K +EAK+ +
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
PN Y T++ C ++++AL K KG +
Sbjct: 583 ESVPNEITYNTLID-NCNNLEFKSALALMKGFCMKGLM 619
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + EM + V +++L+ L + EV +F E + G+ PD TY
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM-LSLGLPPDEVTYTS 523
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERY 245
+I A+C D A + EM +K P+ ++ L+ GF K+ + ++ ++L +++
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583
Query: 246 GMKSGVSMYNVRIHS---------------LCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + ++ YN I + C EA +L+ ML KG K N Y+
Sbjct: 584 SVPNEIT-YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
I+G K GN E+A Y+ M +SG +P+S
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHS 673
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 93/240 (38%), Gaps = 51/240 (21%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+EM L + +L+ A I D + R+ E + G PD+ TYN +I F
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK-GFSPDIVTYNVLINGFN 564
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFG---------------ALVAGFYKEEKYEDVNK 237
+ S + A +L ++ + PN ++ AL+ GF + + ++
Sbjct: 565 KQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADR 624
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT--------- 288
VL+ M + G K +YNV IH K+ +A L EML G P+SVT
Sbjct: 625 VLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLY 684
Query: 289 -------------------------YSHFIYGF-CKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ + G K+GN + + M+ SGL P SS
Sbjct: 685 HEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSS 744
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 11/322 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D +A++ IN + + G Q EE+ R ++ F +++I +G + E A
Sbjct: 336 DHVAYTALINGFVKQSDIGGAFQVKEEMFARK-IKLNTFTYYALI-HGLCKIGDLEKAED 393
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F EM ++ + +N L+ ++ ++ + IE K + + ++
Sbjct: 394 LFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKE-NLTANAYMCGAIVNGL 452
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C D + A + EM +KPN + +V G KE ++E+ K+L +M+ G+ V
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I CK K E K+ L EM++KG+KPN TY FI+G+C+ G + A++ +
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M +SG++PN + ++ CK G+ A + + +G +P+ T L+ GL+ K
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632
Query: 372 VSEA----KELI--GLVKEKFT 387
+ EA EL+ GLV + FT
Sbjct: 633 LQEAMGVFSELLDKGLVPDVFT 654
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 158/346 (45%), Gaps = 23/346 (6%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
KIL + + L+P D ++ I +A YL E+ + N +
Sbjct: 498 KILGVMKDQGLSP----DVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE--VKRVFIEFPKT 174
I Y +A + A R+F EM + + A N ++ I K+ + F +F
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGI-----APNDVICTDLIDGYCKDGNTTKAFAKFRCM 608
Query: 175 Y--GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ PD+ T++ +I ++ A + +E+ K + P+ ++ +L++ KE
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ ++ M + G+ + YN I+ LCKL + A+A+ L D + KG+ NSVTYS
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA----LGFCKESI 348
I G+CK N EA + + M G+ P+S VY ++ CK G+ E A LG +E I
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
A P F +L+ G K+ EA +L+ +V T N T+
Sbjct: 789 AS--TPAFN---ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTY 829
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 156 TIAKDYKEVKRVFIEFPKTY-----GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
+++KD + RV + F K Y I PD+ TY +I A+C +L +M+ K
Sbjct: 203 SLSKDLLKGNRVEL-FWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEK 261
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
PN ++ ++AG + ++ ++ + M G+ +Y I C+ ++ E
Sbjct: 262 GCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEG 321
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
K++LDEM + G+KP+ V Y+ I GF K + A + M + N+ Y+ +++
Sbjct: 322 KSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHG 381
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKN 389
+CK GD E A E G P+ T L+ G + +A E LI + KE T N
Sbjct: 382 LCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTAN 441
Query: 390 VDTWNEIEAGL 400
I GL
Sbjct: 442 AYMCGAIVNGL 452
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 8/285 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---G 176
Y + E +M+E ++ ++ ++ L A D E +E ++ G
Sbjct: 242 YCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA----LELKRSMANKG 297
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD Y +I FC S+ S+L EM +KP+ ++ AL+ GF K+
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAF 357
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V + M +K Y IH LCK+ +A+ L EM G+KP+ TY+ I G+
Sbjct: 358 QVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGY 417
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K N E+A + + L+ N+ + +V +C GD A +E I+ G PN
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++V GL + EA +++G++K++ + +V +N + G
Sbjct: 478 VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T G+KPD Y +I F + SD A+ + EM + IK N ++ AL+ G K E
Sbjct: 330 TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLE 389
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ M G+K + YN I K++ +A LL E+ + + N+ +
Sbjct: 390 KAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G C G+ A + ++ M + GL PN +Y T+V + K G +E A+ +G
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509
Query: 354 PNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTW 393
P+ +++ G A K+ E K L+ ++ + NV T+
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 5/218 (2%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ PD Y +I C++ ++ A S+ M + I + +F AL+ GF+K K
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKL 807
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ ++++ M + Y + I C + EA+ L EM + + PN +TY+
Sbjct: 808 IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG- 351
++G+ + G E + M G+ P+ + MV K G++ AL + +++G
Sbjct: 868 LHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927
Query: 352 -WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
N T+ L+ L + +SE +++ V+++ +K
Sbjct: 928 NVCKNLYTI--LIDALCKHNNLSEVLKVLDEVEKQGSK 963
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I F + AY ++ +M I PN ++ L+ ++ ++ M+
Sbjct: 794 FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQ 853
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ + V Y +H ++ + +E +L DEM+++G+KP+ + +S + K+GN+
Sbjct: 854 KRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWI 913
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A K M + G++ ++Y ++ +CK + L E +G + T +LV
Sbjct: 914 KALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV 973
Query: 364 TGLAGASKVSEA 375
A + EA
Sbjct: 974 CCFHRAGRTDEA 985
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+ KE +++F+E K + P++ TY ++ + S +S+ EM + IKP+ ++
Sbjct: 841 NIKEAEQLFMEMQKR-NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAW 899
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+V KE + K++ M G+ ++Y + I +LCK +E +LDE+
Sbjct: 900 SVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEK 959
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+G K + T + F + G +EA + M S L+
Sbjct: 960 QGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLN 998
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 2/220 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A TE A+ F M E + S AFNAL+ E ++ + + I P+
Sbjct: 769 KAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNH-ITPNH 826
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I+ C + A + EM ++++ PN ++ +L+ G+ + + ++ +
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+K ++V + + K +A L+D+MLS+G+ Y+ I CK N
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNN 946
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
E K + G + + T+V + G + AL
Sbjct: 947 LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEAL 986
>gi|326510149|dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 18/338 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE-ELKTRPDLQ-NERFHAHSIILYGQANMTEHAVR 131
DR FS+A+++L+ A + +S L L P +E F I LY A M H++
Sbjct: 78 DRSIFSLAVSRLTAAARPDLVSSVLSASLTALPAPHPSEGFLIRLIALYADAGMPTHSLS 137
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
TF+ + R A +ALL A A + F + I P + ++N ++K
Sbjct: 138 TFRLVVPPSDR----ALSALLAAYHDAGQPARAIQAFRDLSAELSIAPGVVSHNVLLKCM 193
Query: 192 CESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME--RYGMK 248
+ D + A + M D+ ++P+ S ++ G+ K Y + +L+ + + +K
Sbjct: 194 VATGDVAGARQVFDGMPDKAGLQPDIVSCNEMLKGYLKTGDYAAFDLLLKEVTGGKRRLK 253
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V+ Y +R+ LC + EA+ LL+ M + G+ PN ++ I G CK+G A
Sbjct: 254 PNVTTYKLRMSGLCAKGRSFEAEELLEAMGANGVPPNRECFNTVIGGLCKEGEVGAAVAL 313
Query: 309 YRIM------SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++ M + G+SPN Y ++ + + + AL CKE +A W P F +K L
Sbjct: 314 FKRMPEVPRPNGKGVSPNFETYIMLIEALVENNAFVPALEVCKECLANKWAPPFQAVKGL 373
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTKN--VDTWNEIEA 398
+ GL + KV AKEL G+ +K K + W ++EA
Sbjct: 374 IQGLVKSRKVKHAKEL-GMAMKKAAKGDAKEEWEKVEA 410
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 4/271 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+KEM K++ +V FN ++ AL + + V +E K YG P++ +YN +I +
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV-MEDMKVYGCSPNVVSYNTLIDGY 268
Query: 192 CESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + Y ++L EM + PN ++F L+ GF+K++ KV + M +K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I+ LC K +EA ++ D+M+S G++PN +TY+ I GFCK+ +EA
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + G P + +Y ++ CK G + +E +G VP+ T L+ GL
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 369 ASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ AK+L + K ++ T++ + G
Sbjct: 449 NGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 7/332 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
F++ IN L + N +E++K P++ + G A
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
KEM E+ + ++ FN L+ + +VF E +KP++ +YN +I C
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLC 342
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S A S+ +M ++PN ++ AL+ GF K + ++ + ++ G
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
MYN+ I + CKL K + AL +EM +G+ P+ TY+ I G C++GN E AKK + +
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++ GL P+ + ++ C+ G+ A KE G P T ++ G +
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 373 SEAKEL-IGLVKEKFTK-NVDTWNEIEAGLPQ 402
A + + KE+ + NV ++N + G Q
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG K + ++ A + + S+ + EM R+ I+PN +F ++ K K
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKL---RKCAEAKALLDEMLSKGMKPNSVTYSH 291
V++ M+ YG V YN I CKL K +A A+L EM+ + PN T++
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GF KD N + K ++ M + + PN Y +++ +C GG A+ + ++ G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
PN T +L+ G + EA ++ G VK
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
K +A S L+ KE + DV V + M R ++ V +NV I++LCK K +A+
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCK---DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
++++M G PN V+Y+ I G+CK +G +A + M + +SPN + + ++
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTK 388
K + ++ KE + + PN + SL+ GL K+SEA + +V
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 389 NVDTWNEIEAGL 400
N+ T+N + G
Sbjct: 365 NLITYNALINGF 376
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM+ + VG +N L+ L + + K++F + + G+ PDL T++ +++ +C
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGL-PDLVTFHILMEGYCR 482
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMMERYGMKSGVS 252
+S A +L EM + +KP ++ ++ G+ KE + N QM + ++ V+
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
YNV + + K +A LL+EML KG+ PN +TY
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 38/233 (16%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ +M ++ ++ +NAL+ KE +F K G P YN +
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNML 407
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A+C+ +++ EM+R+ I P+ ++ L+AG + E K+ + G+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG------- 300
V+ +++ + C+ + +A LL EM G+KP +TY+ + G+CK+G
Sbjct: 468 PDLVT-FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 301 -----------------------------NFEEAKKFYRIMSNSGLSPNSSVY 324
E+A M GL PN Y
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 155/346 (44%), Gaps = 13/346 (3%)
Query: 63 RAAALTPE-----SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
RA AL E SH D ++F+I + L A I LE + D + +S+
Sbjct: 63 RAMALFQEMLDRRSH-DVISFNILVTGLCRAGK---IETALEFFRKMDDRCSPNVITYSV 118
Query: 118 ILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++ G +AN AV + M V + L+ L V E
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA- 177
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P+L TYN ++ C + S A +++ +M + PN ++G L+ G K + +D
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L M G + +YN+ I+ LCK + E+ ALL +S G+KP+ VTYS IYG
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ +EA + + + G P+ +Y T++ +CK G + A + G +
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ GL A +V EA L+ +V+ + T+N + GL
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 34/262 (12%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G +P++ TYN +I C++++ A + M P+ ++ L+ G ++ K
Sbjct: 2 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKL 61
Query: 233 EDVNKVLQ-MMERYG-------------MKSG-------------------VSMYNVRIH 259
E + Q M++R ++G V Y+V I
Sbjct: 62 ERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLID 121
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LCK + ++A LL+ M ++G P+ +TY+ + G CK+ A + R M ++G P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N Y ++++ +C+ AL ++ +G PN T +L+ GL +V +A ++
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 380 G-LVKEKFTKNVDTWNEIEAGL 400
++ + T ++ +N + GL
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGL 263
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 148/347 (42%), Gaps = 16/347 (4%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
S ++LE +A +P D + ++I ++ L + + + L E+ + N
Sbjct: 130 SQAVELLESMKARGCSP----DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN--L 183
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
++ +L+G +A A+ ++M +V + L+ L K+ + +
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G PDL YN +I C++ + ++L IKP+ ++ +++ G +
Sbjct: 244 MIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 302
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ ++L ++ G V +Y+ I LCK K EA L + M G + VTYS
Sbjct: 303 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYS 362
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G +EA M G P++ Y +++ +C + A+ +E
Sbjct: 363 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 422
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA-----KELI--GLVKEKFTKNV 390
P+ T L+ G+ +V A +E+I G++ + T ++
Sbjct: 423 NCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSI 469
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A+ + ++ + ++ V +++++ L + E R+ + + K+ G PD+
Sbjct: 265 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL-YVKSRGCPPDV 323
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y+ +I C++ A+ + M + ++ L+ G K + ++ + +L
Sbjct: 324 ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 383
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G YN I LC L EA L++EM P++VTY+ I+G C+
Sbjct: 384 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 443
Query: 302 FEEAK-KFYRIMSNSGLSPNSSVYFTMV 328
+ A +++ M ++G+ P+ Y ++
Sbjct: 444 VDSAALDYFQEMIDNGVIPDHITYSILL 471
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYG--QANMTEH 128
D + +++ IN L +A+ + L + +PD+ +S ++YG ++N +
Sbjct: 252 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT-----YSSVIYGLCRSNRLDE 306
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R + V ++ L+ L A E ++ E G D+ TY+ +I
Sbjct: 307 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY-EVMTGDGCDADVVTYSTLI 365
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A+ +LA M R P+ ++ +L+ G ++ ++++ MER
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 425
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKAL--LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
YN+ IH +C++ + ++ AL EM+ G+ P+ +TYS + G K + E +
Sbjct: 426 PSAVTYNILIHGMCRMER-VDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELR 484
Query: 307 KF 308
Sbjct: 485 HL 486
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M +G + V YN I LCK + A+ L + M S P+ VTY+ + G + G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A ++ M + S + + +V +C+ G ETAL F ++ + PN T
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRK-MDDRCSPNVITYSV 118
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
L+ GL A++VS+A EL+ +K + + +V T+ + GL
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 158
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 164/352 (46%), Gaps = 8/352 (2%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
LT L+ +++PE L++ +A + R + I KL A F+ + + E++
Sbjct: 60 LTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREG 119
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFK-EMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
+ Y + + AV + +++ ++ +N LL L K +
Sbjct: 120 HEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLL 179
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ V+ E GI+PD+ T N +IKA C + +A +L EM ++ P+ ++F L+
Sbjct: 180 ESVYNEMTDR-GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
GF +E E +V M G NV I+ CK+ + +A + + ++ G +P
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+ VTY+ F++ C++G+ A K +M G P+ Y T++ + K G+ + A G
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
+ + +G +P+ TT +L+ L +++ EA +L GL + +T N+
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 7/284 (2%)
Query: 74 DRLAFSIAINKLS---EANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D ++ IN LS E + GI + + PD F+ + L Q N E A+
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT--FNTLIVALCSQ-NRLEEAL 390
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+E+ L V FN L+ AL D R+F E K+ G PD TYN +I
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCAPDEVTYNILIDH 449
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C +A +L EM+ + ++ ++ K+ + E+ +V M+ +G+
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+N I LCK ++ +A L+++M+ +G++P+++TY+ + +CK G+ ++A
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILE 569
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
M+ +G + Y T++ +CK G + AL + KG P
Sbjct: 570 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 613
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L++AL +E + E G+ PD+ T+N +I A C+ D + EM
Sbjct: 373 FNTLIVALCSQNRLEEALDLAREL-TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
P+ ++ L+ K + +L+ ME G YN I +LCK +
Sbjct: 432 KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRI 491
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ + D+M + G+ ++VT++ I G CK ++A + M GL P++ Y ++
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSI 551
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ CK GD + A + A G+ + T +L+ GL A + A +L+
Sbjct: 552 LTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLL 603
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 157/341 (46%), Gaps = 13/341 (3%)
Query: 32 DKTPLTSKDKTRAALTLLKSESNPEKILEICR---AAALTPESHLDRLAFSIAINKLSEA 88
D+ L + L S++ E+ L++ R L+P+ + F+I IN L +
Sbjct: 363 DRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVY----TFNILINALCKV 418
Query: 89 NYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVG 146
+ + EE+K+ +E ++I++ +M + +A+ KEM+ + S
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEV--TYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N ++ AL +E + VF + +GI T+N +I C++ A ++ +
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQM-DAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M ++ ++P+ ++ +++ + K+ + +L+ M G + V Y I+ LCK +
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A LL M KG++P Y+ I + N +A +R M+ G P++ Y
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKI 655
Query: 327 MVYFMCKGGD-YETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +C+GG + A F E + KG++P F++ + L GL
Sbjct: 656 VFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN VI ++ + A I+ +M + P+ ++F L+ + + E+
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + + G+ V +N+ I++LCK+ L +EM S G P+ VTY+ I
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G A + M ++G ++ Y T++ +CK E A + A G +
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
T +L+ GL A ++ +A ELI +VKE + T+N I
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSI 551
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD TYN + C++ S A ++ M ++ P+ ++ ++ K + ++
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + +N I +LC + EA L E+ KG+ P+ T++ I
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G+ + + M +SG +P+ Y ++ +C G AL KE + G +
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +++ L ++ EA+E+ + +++ T+N + GL
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 149/309 (48%), Gaps = 6/309 (1%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
G+ ++L P ++ F S++ +AN E + F+ M + V F+ +
Sbjct: 198 GVFRFLANKGVFPTVKTCTFLLSSLV---KANELEKSYWVFETM-RQGVSPDVYLFSTAI 253
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A ++ ++F + K G+ P++ TYN +I C+ + A+ +M + +
Sbjct: 254 NAFCKGGKVEDAIQLFFDMEK-LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
++ L+ G K EK+ + N VL+ G +YN I CK+ +A
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ +M+SKG+ PNSVT + I GFCK G E+A+ M + G S N + T+++++C
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 432
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVD 391
+E+AL F +E + + PN + +LV GL K S+A EL L+++ F N+
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492
Query: 392 TWNEIEAGL 400
T N + GL
Sbjct: 493 TTNALIHGL 501
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 6/317 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ IN L + FN + L+E + NE + I Y + A+R +
Sbjct: 317 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 376
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + + N+++ ++ + + E + + I P + +I C +
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLCMN 434
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
S SA L EM ++++PN LV G KE K+ D ++ + G + +
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 494
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N IH LCK EA LL +ML +G + +TY+ I G CK+G EE K M
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P++ Y +++ MC+ G + A+ E ++ VPN T ++ G A K+ E
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Query: 375 AKELIGLVKEKFTKNVD 391
++L E T+N++
Sbjct: 615 GEKLF---TELLTQNLE 628
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
NM E AVR K+M E +N L+ +E ++ E K GI+PD
Sbjct: 505 GNMQE-AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTF 562
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I C A ++ E + + PN ++G ++ G+ K +K E+ K+ +
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
++ +YN I + C+ EA L D+M SKG+ P + TYS I+G C G
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E+AK M GL PN Y ++ CK G + + +E + PN T +
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742
Query: 363 VTGLAGASKVSEAKELI------GLVKEKFTKNVDT 392
+ G + + + A +L+ G+V + T NV T
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 778
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R +EM +R + G L+ L + + ++ + G +L T N
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTTNA 496
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ + A +L +M + + ++ L++G KE K E+ K+ M + G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ YN+ IH +C++ K EA L +E S+ + PN TY I G+CK EE +
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + + L NS VY T++ C+ G+ A + +KG P T SL+ G+
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
++ +AK LI + KE NV + + G
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 710
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 7/276 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + E A++ F +M++ + +V +N L+ L + E R F E G+
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR-FKEKMVKDGVNA 314
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L TY+ +I + + A S+L E K PN + L+ G+ K D ++
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ N I CK+ + +A+ +L+EMLS+G N ++ I+ C +
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
FE A +F R M + PN + T+V +CK G + A+ + KG+ N T
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 494
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+L+ GL + EA L+ G V +K T N
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 530
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++ I+ + + E K+R + N + I Y +A+ E + F
Sbjct: 560 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 619
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E+ L + +N L+ A + E ++ + ++ GI P TY+ +I C
Sbjct: 620 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIHGMCN 678
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A ++ EM ++ + PN + AL+ G+ K + + V VLQ M Y +
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 738
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y V I K A LL EM+ KG+ P++VTY+ GFCK+G EE K MS
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 314 NSGLSPNSSVYFTMVY 329
GL + Y T+V+
Sbjct: 799 QEGLPLDEITYTTLVH 814
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 3/262 (1%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++++++G + + AV + E L +V + ++ A +E +++F E
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
T ++ + YN +I+A+C + ++ A+ + +M K I P +++ +L+ G +
Sbjct: 623 -LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 681
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
ED ++ M + G+ V Y I CKL + + +L EM S + PN +TY+
Sbjct: 682 MEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTV 741
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G+ K G+ + A K M G+ P++ Y + CK G E C +G
Sbjct: 742 MIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG 801
Query: 352 WVPNFTTMKSLVTGLAGASKVS 373
+ T +LV G S ++
Sbjct: 802 LPLDEITYTTLVHGWQQPSALT 823
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 5/235 (2%)
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
C++ L P + + + I+ +A+ + EL T+ N + I Y
Sbjct: 587 CKSRDLVPNVY----TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 642
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ T A + +M + + +++L+ + ++ K + E K G+ P++
Sbjct: 643 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKE-GLLPNV 701
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y +I +C+ ++L EM I PN ++ ++ G+ K + K+L
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
M G+ YNV + CK K E + D M +G+ + +TY+ ++G+
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I+ LS+A S YL E++ R + I+ Y + A + F
Sbjct: 418 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 477
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM +H L + + L+ A + E +F G+ PD+ T + I +
Sbjct: 478 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL-HALGVLPDVQTCSAFIHGLLK 536
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +E+ K + P+ ++ +L++GF K+ + E ++ M G+ + +
Sbjct: 537 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 596
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + LCK A+ L D M KG++P+SVTYS I G+CK N EA + M
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P+S VY +V+ CK GD E A+ +E + KG+ + +L+ G + K+
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 715
Query: 374 EAKEL 378
EA +L
Sbjct: 716 EASQL 720
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 3/265 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ ++II G +A A TF+EM + L+ A +AL+ D EV R+ +
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KD 268
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ GI +L TYN +I C+ A IL M KPN+ +F L+ G+ +E
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++L ME+ + Y I+ LC + + A LL++M G+KPN V YS
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+ +G EEA++ MS SG++P+ Y ++ + K G E A + E +
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 448
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA 375
G P+ T + + G + K++EA
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEA 473
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P +Y +I C D S A +L +M +KPN + L+ G+ E + E+ ++
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M G+ + YN I L K K EA L E+ +G+KP++VT+ FI G+ K
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 466
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA K++ M + GL PN+ +Y ++ K G+ AL + A G +P+ T
Sbjct: 467 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 526
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ + GL +V EA ++ +KEK +V T++ + +G
Sbjct: 527 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M L+ +V ++ L++ +E +R+ ++ G+ PD+ YN +I
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL-LDGMSCSGVAPDIFCYNAII 426
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
++ A + L E+ + +KP+A +FGA + G+ K K + K M +G+
Sbjct: 427 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y V I+ K EA ++ + + G+ P+ T S FI+G K+G +EA K
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + GL P+ Y +++ CK G+ E A E KG PN +LV GL
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606
Query: 369 ASKVSEAKELIGLVKEK 385
+ + A++L + EK
Sbjct: 607 SGDIQRARKLFDGMPEK 623
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ TY + C + + A EM + +KP+ ++ AL+ GF +E ++V
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ +M G+ + YNV IH LCK K +A +L M++ G KPNS T+ I G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ N A + M L P++ Y M+ +C D A ++ G PN
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+L+ G A ++ EA+ L+ G+ ++ +N I
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 425
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 13/309 (4%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I ++L L PD+Q H ++ G+ + A++ F E+ E L V +++L+
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRV---QEALKVFSELKEKGLVPDVFTYSSLIS 567
Query: 154 ALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
EV++ F + GI P++ YN ++ C+S D A + M K
Sbjct: 568 GFC---KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
++P++ ++ ++ G+ K E + + M G++ +YN +H CK +A
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L EML KG +++++ I G+CK +EA + ++ M + P+ Y T++ +
Sbjct: 685 NLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 743
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
CK G E A KE + + + T SL + G +K+ ++ E+ L ++ K V
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSL---MYGYNKLGQSSEVFALFEKMVAKGVK 800
Query: 392 TWNEIEAGL 400
+E+ GL
Sbjct: 801 P-DEVTYGL 808
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 9/289 (3%)
Query: 105 PDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
PD+ F ++II +A E A E+ L+ F A +L + E
Sbjct: 417 PDI----FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ F E +G+ P+ Y +I ++ + A SI + + P+ + A +
Sbjct: 473 AAKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + ++ KV ++ G+ V Y+ I CK + +A L DEM KG+
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 591
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN Y+ + G CK G+ + A+K + M GL P+S Y TM+ CK + A
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
E +KG P+ +LV G K + ++ + L +E K T
Sbjct: 652 FHEMPSKGVQPHSFVYNALV---HGCCKEGDMEKAMNLFREMLQKGFAT 697
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ A F EM ++ +NAL+ D ++ +F E + G
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFAT 697
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L ++N +I +C+S A + EM K I P+ ++ ++ K K E+ N +
Sbjct: 698 TL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 756
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ + Y ++ KL + +E AL ++M++KG+KP+ VTY IY CK+
Sbjct: 757 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 816
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N EA K + G+ +++ ++ +CK D A E G P+
Sbjct: 817 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 876
Query: 360 KSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
+LV A K+ EA + +GLV + T
Sbjct: 877 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 2/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F+EM + ++ +FN L+ + +E ++F E I PD TY
Sbjct: 681 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQ-IMPDHVTYTT 738
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
VI C++ A + EM +++ + ++ +L+ G+ K + +V + + M G
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K Y + I++ CK EA L DE++ KGM + I CK + EA
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K M GL P+ + T+V + G + A + + G VP+ TT+ LV G
Sbjct: 859 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN 918
Query: 367 AGASKVSEAKELI 379
+ +A+ LI
Sbjct: 919 LNDTDSEDARNLI 931
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%)
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L M K + PN ++ + AG + ++ + + M++ G+K + + I +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
E + D M+S G+ N +TY+ I+G CK G E+A + + M G PNS
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ ++ C+ + AL E + VP+ + +++ GL +S A +L+
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 372
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A + F+EM ++ + ++ A +E +F E + +
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM-QERNLIV 766
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY ++ + + SS +++ +M K +KP+ ++G ++ KE+ + K+
Sbjct: 767 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 826
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ GM + +++++ I +LCK EA LLDEM G+KP+ S + F +
Sbjct: 827 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 886
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
G +EA + + + + GL P+++ +V D E A K+ +
Sbjct: 887 GKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L+F+ I+ ++ SQ +E+ + + + + I + +A E A FKE
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E L + +L+ EV +F E G+KPD TY VI A C+
Sbjct: 759 MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF-EKMVAKGVKPDEVTYGLVIYAHCKED 817
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A+ + E+ K + + L+ K E + +K+L M G+K ++ +
Sbjct: 818 NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACS 877
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ S + K EA + + + S G+ P++ T + G D + E+A+ +
Sbjct: 878 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 932
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ A+ EM + + +V +N ++ I E R+F E + PD T
Sbjct: 243 LVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR-DVMPDTVTL 301
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
++ C+ S A + M K ++PN S++ AL+ G+ + + KV ++M R
Sbjct: 302 TILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G GV YN+ I+ CK R+ EAK+LL EM K + P++VTYS + G C+ G +E
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A ++ M + GL PN Y ++ CK G + AL K K PN L+
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G+ A K+ AKEL L + + T+ + GL
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 127/274 (46%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +F M R SV F L + K Y V + + +G+ ++ + N
Sbjct: 70 DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLNV 128
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C + A SIL +M + I P AS+F AL+ G E K ++ ++ M R G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I+ LCK + A + +M G KP+ VTY+ I CKD +A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F M + G+ PN Y MV+ C G A KE + + +P+ T+ LV GL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
VSEA+ + + EK + N+ T+N + G
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 139/333 (41%), Gaps = 8/333 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ L + N ++L E+ R P++ H + GQ N A
Sbjct: 227 DVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLN---EAT 283
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R FKEM + L+ L E + VF E G++P++ TYN ++
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVF-ETMTEKGVEPNISTYNALMDG 342
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C + A + M R+ P S+ L+ GF K + ++ +L M +
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y+ + LC+ + EA + EM S G+ PN VTYS + GFCK G+ +EA K +
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M L PN + ++ M G E A + A G P T ++ GL
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEG 522
Query: 371 KVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
EA +L + + F N ++N + G Q
Sbjct: 523 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 555
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
V +MD + H+V + N L+ L + + K GI P T+N +I
Sbjct: 107 VVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFK-LGIHPTASTFNALI 165
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A + EM R+ +PN S+ ++ G K V + ME+ G K
Sbjct: 166 NGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCK 225
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I SLCK R +A L EML +G+ PN TY+ ++GFC G EA +
Sbjct: 226 PDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M + P++ +V +CK G A + KG PN +T +L+ G
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
++EAK++ ++++ V ++N + G
Sbjct: 346 QRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 36/294 (12%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F EM +V ++N ++ L + VF + + G KPD+ TYN
Sbjct: 175 KEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN-GCKPDVVTYNT 233
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF------------YKEEKYED 234
+I + C+ + A L+EM + I PN ++ +V GF +KE D
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293
Query: 235 V-----------------------NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
V V + M G++ +S YN + C R EAK
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
+ + M+ +G P +Y+ I GFCK +EAK M + L+P++ Y T++ +
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
C+ G + AL KE + G +PN T L+ G + EA +L+ ++EK
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 1/244 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A + F+ M V ++N L+ ++ E K + E + P
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK-ALNP 401
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY+ +++ C+ A +I EM + PN ++ L+ GF K ++ K+L
Sbjct: 402 DTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLL 461
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ ++ + + + I + K AK L ++ + G++P TY+ I G K+
Sbjct: 462 KSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKE 521
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA +R M + G PNS Y M+ + D TA+ E + K + N +T
Sbjct: 522 GLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTF 581
Query: 360 KSLV 363
+ L+
Sbjct: 582 QMLL 585
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F I++L N F LE +K E YG+ + A+R F
Sbjct: 49 DHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVF 108
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--FIEFPKTYGIKPDLDTYNRVIKAF 191
+M++ +++ + ++ L I + VKR F + + GI P + + N +IKA
Sbjct: 109 HKMEDFQVKPTQKSY---LTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKAL 165
Query: 192 CESSDS-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C++ ++ SA+ + EM + +P++ ++G L+ G K K ++L ME G+
Sbjct: 166 CKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPS 225
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y IH LC+ EA LL+EM+ G++PN TYS + G CK G+ +A +
Sbjct: 226 VVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLE 285
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+M L PN Y T++ +CK G + A+ +G P+ +++GL A
Sbjct: 286 VMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAAC 345
Query: 371 KVSEAKELI 379
EA I
Sbjct: 346 NYQEAANFI 354
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 5/259 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E+ + +P Q I++ + N + A+ +KEM E + +V + N L+ AL
Sbjct: 111 MEDFQVKPT-QKSYLTVFDILV--EENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCK 167
Query: 158 AKDYKEVK-RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
++ E R+F E P G +PD TY +I C+ S A +L EM+ K + P+
Sbjct: 168 NEETVESAFRLFREMPNR-GCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSV 226
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S+ +L+ G + ++ ++L+ M G++ V Y+ + LCK ++A LL+
Sbjct: 227 VSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEV 286
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ + + PN VTYS I G CK+G EA + M GL P++ +Y ++ +C +
Sbjct: 287 MVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACN 346
Query: 337 YETALGFCKESIAKGWVPN 355
Y+ A F E G PN
Sbjct: 347 YQEAANFIDEMALGGISPN 365
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 9/269 (3%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A EM+E L SV ++ +L+ L + + E + E GI+P++ TY+ +
Sbjct: 209 QAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMI-INGIEPNVFTYSSL 267
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ C+S SS A +L M R+ + PN ++ L+ G KE K+ + ++L M G+
Sbjct: 268 MDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGL 327
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-------HFIYGFCKDG 300
K MY I LC EA +DEM G+ PN +++ + G C +
Sbjct: 328 KPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNV 387
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ A + Y M G+S + +V CK GD A +E I G +P+
Sbjct: 388 DPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWN 447
Query: 361 SLVTGLAGASKVSEAKE-LIGLVKEKFTK 388
L+ GL KV E E L+ +K+KF +
Sbjct: 448 VLMCGLWDRKKVRETTELLVAELKQKFVE 476
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
++FGA++ ++ +L+ M++ + ++ ++ + +A + +
Sbjct: 51 NTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHK 110
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M +KP +Y ++ + + A FY+ M G+ P ++ +CK +
Sbjct: 111 MEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEE 170
Query: 337 -YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
E+A +E +G P+ T +L+ GL K+S+AKEL+ ++EK + +V ++
Sbjct: 171 TVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYT 230
Query: 395 EIEAGLPQ 402
+ GL Q
Sbjct: 231 SLIHGLCQ 238
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 134/257 (52%), Gaps = 3/257 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
SV A+NA+LLAL+ A R F + + G+ P++ TYN +I+A C A SI
Sbjct: 115 SVLAYNAVLLALSDAS--LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M PN ++ LVA F++ + + +++ MM G+K + +N ++ +CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A+ + DEM+ +G+ P+ V+Y+ + G+CK G EA + M+ G+ P+
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
+ ++++ MCK G+ E A+ ++ +G N T +L+ G + +A + G+
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352
Query: 383 KEKFTKNVDTWNEIEAG 399
+ + +V +N + G
Sbjct: 353 QCRIKPSVVCYNALING 369
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 155/356 (43%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ + +A + +++ R NE I + + + A+
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 348
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M + +++ SV +NAL+ + E + + E + G+KPD+ TY+ +I A+C+
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCK 407
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ D+ SA+ + +M K + P+A ++ +L+ +E++ D + + + M + G++
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG------------------ 295
Y I CK A +L D+M+ G+ P+ VTYS I G
Sbjct: 468 YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 527
Query: 296 --------------------------------FCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
FC G EA K Y+ M + + + SV
Sbjct: 528 HEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 587
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C+ G+ AL F K+ + +G+ PN T+ SL+ GL V EA ++I
Sbjct: 588 YSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVI 643
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A R M + L+ ++ FN+++ + A ++ ++VF E + G+ PD
Sbjct: 197 RAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE-GLAPDG 255
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE-DVNKVLQ 240
+YN ++ +C++ S A S+ AEM +K I P+ +F +L+ K E V V Q
Sbjct: 256 VSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQ 315
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML--SKGM-----KPNSVTYSHFI 293
M ER G++ + I CK K LD+ L +GM KP+ V Y+ I
Sbjct: 316 MRER-GLQMNEVTFTALIDGFCK-------KGFLDDALLAVRGMRQCRIKPSVVCYNALI 367
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+C G +EA++ M GL P+ Y T++ CK D +A ++ + KG +
Sbjct: 368 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 427
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
P+ T SL+ L ++S+A L +GL ++FT
Sbjct: 428 PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A + F EM L ++N L+ A E VF E + GI PD+
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPDV 290
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+ +I C++ + A +++ +M + ++ N +F AL+ GF K+ +D ++
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN---------------- 285
M + +K V YN I+ C + + EA+ LL EM +KG+KP+
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410
Query: 286 -------------------SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
++TYS I C++ +A ++ M GL P+ Y +
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ CK G+ E AL + + G +P+ T L+ GL+ +++ EA++L+
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F M + +V +N L+ AL KE + + + G P++ TYN ++
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDM-RGAGCGPNVVTYNTLV 192
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AF + + A ++ M +KPN +F ++V G K K ED KV M R G+
Sbjct: 193 AAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLA 252
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + CK EA ++ EM KG+ P+ VT++ I+ CK GN E A
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M GL N + ++ CK G + AL + P+ +L+ G
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
++ EA+EL+ ++ K K +V T++ I
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTI 401
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL------------- 222
G+ PD+ TY+ +I +S+ + A +L ++ + P + + AL
Sbjct: 495 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVL 554
Query: 223 --VAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ GF + + +KV Q M++R G S+Y+V IH C+ +A + +ML
Sbjct: 555 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDG-SVYSVLIHGHCRAGNVMKALSFHKQMLQ 613
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+G PNS + I G ++G EA + + + N
Sbjct: 614 RGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 149/309 (48%), Gaps = 6/309 (1%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
G+ ++L P ++ F S++ +AN E + F+ M + V F+ +
Sbjct: 265 GVFRFLANKGVFPTVKTCTFLLSSLV---KANELEKSYWVFETM-RQGVSPDVYLFSTAI 320
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A ++ ++F + K G+ P++ TYN +I C+ + A+ +M + +
Sbjct: 321 NAFCKGGKVEDAIQLFFDMEK-LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
++ L+ G K EK+ + N VL+ G +YN I CK+ +A
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ +M+SKG+ PNSVT + I GFCK G E+A+ M + G S N + T+++++C
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 499
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVD 391
+E+AL F +E + + PN + +LV GL K S+A EL L+++ F N+
Sbjct: 500 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559
Query: 392 TWNEIEAGL 400
T N + GL
Sbjct: 560 TTNALIHGL 568
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 6/317 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ IN L + FN + L+E + NE + I Y + A+R +
Sbjct: 384 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 443
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + + N+++ ++ + + E + + I P + +I C +
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLCMN 501
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
S SA L EM ++++PN LV G KE K+ D ++ + G + +
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 561
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N IH LCK EA LL +ML +G + +TY+ I G CK+G EE K M
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P++ Y +++ MC+ G + A+ E ++ VPN T ++ G A K+ E
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 375 AKELIGLVKEKFTKNVD 391
++L E T+N++
Sbjct: 682 GEKLF---TELLTQNLE 695
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 133/319 (41%), Gaps = 50/319 (15%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
NM E AVR K+M E +N L+ +E ++ E K GI+PD
Sbjct: 572 GNMQE-AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTF 629
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV---- 238
TYN +I C A ++ E + + PN ++G ++ G+ K +K E+ K+
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689
Query: 239 ----LQM---------------------------MERYGMKSGVSMYNVRIHSLCKLRKC 267
L++ M G+ + Y+ IH +C + +
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+AK L+DEM +G+ PN V Y+ I G+CK G ++ + MS+ + PN Y M
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL--------- 378
+ K GD +TA E + KG VP+ T L G K+ E K L
Sbjct: 810 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFNS 869
Query: 379 -IGLVKEKF---TKNVDTW 393
+ L+ E F T+ VD W
Sbjct: 870 PLFLIHEAFRACTRRVDLW 888
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R +EM +R + G L+ L + + ++ + G +L T N
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTTNA 563
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ + A +L +M + + ++ L++G KE K E+ K+ M + G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ YN+ IH +C++ K EA L +E S+ + PN TY I G+CK EE +
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + + L NS VY T++ C+ G+ A + +KG P T SL+ G+
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
++ +AK LI + KE NV + + G
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 777
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 7/276 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + E A++ F +M++ + +V +N L+ L + E R F E G+
Sbjct: 323 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR-FKEKMVKDGVNA 381
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L TY+ +I + + A S+L E K PN + L+ G+ K D ++
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ N I CK+ + +A+ +L+EMLS+G N ++ I+ C +
Sbjct: 442 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 501
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
FE A +F R M + PN + T+V +CK G + A+ + KG+ N T
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 561
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+L+ GL + EA L+ G V +K T N
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 597
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 5/215 (2%)
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
C++ L P + + + I+ +A+ + EL T+ N + I Y
Sbjct: 654 CKSRDLVPNVY----TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ T A + +M + + +++L+ + ++ K + E K G+ P++
Sbjct: 710 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKE-GLLPNV 768
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y +I +C+ ++L EM I PN ++ ++ G+ K + K+L
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
M G+ YNV + CK K E K L ++
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +I C+S AY +M ++ + P+ ++ + G K EK ++
Sbjct: 286 GVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEA 345
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N VL+ M G +YN I CK+ +EA + D+MLSKG+ PNSVT + I G
Sbjct: 346 NCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQG 405
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK +A+ M GL N + ++ ++C + TAL F +E + + PN
Sbjct: 406 FCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPN 465
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+ +LV+GL A K EA EL L+ + F N+ T N + GL
Sbjct: 466 DGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 155/344 (45%), Gaps = 13/344 (3%)
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSI 117
IC + P+ HL FS IN + + + G+ +E+L P++ H +
Sbjct: 247 IC-LGGIIPDVHL----FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGL 301
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
G+ + A R ++M + K+ S+ ++ + L + E V E + G
Sbjct: 302 CKSGR---LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSE-LGF 357
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P+ YN +I +C+ + S A I +M K I PN+ + +L+ GF K ++
Sbjct: 358 VPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAEN 417
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
VL+ M G+ +++ I+ LC + A + EML + ++PN + + G C
Sbjct: 418 VLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLC 477
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G EA + + + G PN +++ +CK G+ + L ++ + +G V +
Sbjct: 478 KAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRI 537
Query: 358 TMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +L++G KV E EL +VK+ ++ T+N + GL
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F++ ++ L A+ + S+ E K + N + I Y +AN E
Sbjct: 570 DIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLL 629
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E+ KL + +N+L+ A I + R+ + K+ G+ TY+ ++ C
Sbjct: 630 NELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM-KSRGVLLSCATYSSLMHGLCN 688
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L EM ++ + PN + ++ G+ K + VN VLQ M + +
Sbjct: 689 IGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFT 748
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + I CKL K EA LL+EM KG+ P++VTY+ F G CK+G EEA K MS
Sbjct: 749 YTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS 808
Query: 314 NSGLSPNSSVYFTMV 328
+ + + Y T++
Sbjct: 809 SGAVCLDEITYTTLI 823
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + ++ + FN LL L A E R++ E K G P++ TY +I +C+
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN-GYVPNVYTYGVMIDGYCK 618
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++ ++L E+ K ++ N+ + +L+ + ++ M+ G+ +
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ +H LC + +AK LLDEM +G+ PN V Y+ I G+ K G + + MS
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ + PN Y M+ CK G + A E KG +P+ T + GL KV
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798
Query: 374 EA 375
EA
Sbjct: 799 EA 800
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P L T ++ + ++++ +Y + + I P+ F ++ F K + +D
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ME+ G+ V YN IH LCK + EA ++M+ + + P+ +TYS FI G
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K +EA + MS G PN VY T++ CK G+ AL + ++KG PN
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395
Query: 356 FTTMKSLVTGLAGASKVSEA----KELIG 380
T+ SL+ G + ++ +A +E+IG
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIG 424
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 146/318 (45%), Gaps = 4/318 (1%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+++ +FS+ IN L F ++ E+ R N+ + +A AV
Sbjct: 429 INQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL 488
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ + ++ NAL+ L A + +E ++ + + G+ D TYN +I C
Sbjct: 489 WCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER-GLVFDRITYNTLISGCC 547
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + + EM +K I+P+ +F L+ G +K ++ +++ ++ G V
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y V I CK K E + LL+E++SK ++ NSV Y+ I +C +GN A + M
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ + + Y ++++ +C G + A E +G +PN +++ G SK+
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTII---GGYSKL 724
Query: 373 SEAKELIGLVKEKFTKNV 390
+ ++ +++E + N+
Sbjct: 725 GQMNKVNIVLQEMSSHNI 742
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +EM LR + G L+ L A E ++ G P++ T N +I
Sbjct: 450 ALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK-GFVPNIVTSNALI 508
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ + +L +M + + + ++ L++G KE K ++ ++ + M + G++
Sbjct: 509 HGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQ 568
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +N+ +H LC K EA L E G PN TY I G+CK EE +
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENL 628
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + L NS VY +++ C G+ A + ++G + + T SL+ GL
Sbjct: 629 LNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCN 688
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
V +AK L+ + KE NV + I G
Sbjct: 689 IGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG 720
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 2/322 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ IN L + + + L+E+ + NE + I Y + A++ +
Sbjct: 327 ITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDD 386
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + N+L+ + + + V E G+ + +++ VI C
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR-GLPINQGSFSMVINWLCLKF 445
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+A + EM ++++PN LV+G K K + ++ + G + N
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LCK E LL +ML +G+ + +TY+ I G CK+G +E + M
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ P+ + +++ +C + A E G+VPN T ++ G A+KV E
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEG 625
Query: 376 KELIG-LVKEKFTKNVDTWNEI 396
+ L+ LV +K N +N +
Sbjct: 626 ENLLNELVSKKLELNSVVYNSL 647
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 6/275 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK--TYGIKPDLDTYNR 186
A+ K+M++ K+ +V +N ++ L YK + F F K T GIKPD+ TYN
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLC---KYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C S A +L++M + I PN +F +L+ F KE K + K+ M +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN I+ C + EA+ + M+SK P+ VTY+ I GFCK EE
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +R MS GL N+ Y T++ + + GD + A K+ ++ G P+ T L+ GL
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L K K N+ T+N + G+
Sbjct: 477 CKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 6/291 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E +PD+ + YG+ + A R +M E K+ +V FN+L+ A
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWS---DASRLLSDMIERKINPNVVTFNSLIDAFAK 338
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E +++F E + I P++ TYN +I FC A I M K P+
Sbjct: 339 EGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ GF K ++ E+ ++ + M + G+ YN I L + C A+ + +M
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+S G+ P+ +TYS + G CK G E+A + + S + PN Y M+ MCK G
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517
Query: 338 ETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
E FC S+ KG PN ++++G EA L +KE T
Sbjct: 518 EDGWDLFCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E + FN L+ L + E I+ G +P
Sbjct: 161 YCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D A S+L +M++ I+ N + ++ G K + +D +
Sbjct: 220 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLF 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ME G+K V YN I LC + ++A LL +M+ + + PN VT++ I F K+
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA+K + M + PN Y +++ C + A ++K +P+ T
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ G A +V E EL + ++ N T+N + GL Q
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F EM + + S+ F+ LL A IAK K +V E + GI + TY+
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ FC S A ++L +M + +P+ + +L+ G+ ++ + ++ M
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K +N IH L K +EA AL+D M+++G +P+ TY + G CK G+ + A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M + N +Y T++ +CK + A + KG P+ T SL++
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K NV T+N +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSL 332
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + F EM + + ++ +N+L+ + E +++F + PD+ TYN +
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTL 402
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IK FC++ + EM ++ + N ++ L+ G ++ + K+ + M G+
Sbjct: 403 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 462
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y++ + LCK K +A + + + M+PN TY+ I G CK G E+
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWD 522
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +S G+ PN +Y TM+ C+ G E A +E G +P+ +L+
Sbjct: 523 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 582
Query: 368 GASKVSEAKELI 379
+ + ELI
Sbjct: 583 RDGDKAASAELI 594
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 1/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F M V +N L+ AK +E +F E + G+ + TYN
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNT 436
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I +M + P+ ++ L+ G K K E V + +++
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN + Y+ I GFC+ G EEA
Sbjct: 497 MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 556
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G P+S Y T++ + GD + KE + G+V + +T+ ++ L
Sbjct: 557 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 34/359 (9%)
Query: 64 AAALTPE-SHLDRLAFS----------IAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
AA ++P S R AFS ++ N LSE + ++ + E +K+RP F
Sbjct: 25 AATVSPSLSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEF 84
Query: 113 HAHSIILYGQANMTEH--AVRTFKEMDEHKLRHSVGAFNALL--------LALTIAKDYK 162
S +L A M + + ++M + H+ ++ LL L L +A K
Sbjct: 85 ---SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGK 141
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+K G +PD+ T + ++ +C S A +++ +M KP+ +F L
Sbjct: 142 MMK---------LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTL 192
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G + K + ++ M G + + Y ++ LCK A +LL +M +
Sbjct: 193 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 252
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
+ N V Y+ I G CK + ++A + M G+ P+ Y +++ +C G + A
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ I + PN T SL+ A K+ EA++L +++ N+ T+N + G
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E + F+EM + L + +N L+ L A D +++F + G+ P
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPP 464
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ ++ C+ A + + + ++PN ++ ++ G K K ED +
Sbjct: 465 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K V +Y I C+ EA AL EM G P+S Y+ I +D
Sbjct: 525 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 584
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+ + + + M + G ++S +MV M G E
Sbjct: 585 GDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLE 622
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+KEM ++ ++ +FN ++ L + + IE K G+ ++ TYN +I +
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDI-IEDMKVRGVSANVITYNTLIDGY 208
Query: 192 CESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ Y +IL EM I PN +F L+ GF K++ KV M R G+K
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I+ LC K EA AL D+M++ +KPN +T++ + GFCK+ ++A +
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G++PN + Y ++ CK + E A + + KG P+ +T L+ GL
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWN 394
+ A+ L+ + K K ++ T+N
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYN 415
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 11/306 (3%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERF 112
+ IL+ RA + P + + F+I I+ + + + E+ +P++
Sbjct: 221 DAILKEMRADGICP----NEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ + G+ N A +M L+ ++ NALL K K+ +F + P
Sbjct: 277 LINGLCNNGKVN---EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI P++ TYN +I A+C+ + A+++ M K + P+ S++ L+AG ++
Sbjct: 334 KQ-GITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E ++ M+ +K+ + YN+ I SLC + +A LLDEM KG+KP+ +TY+
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+CK+GN A M G N + Y ++ CK E A G E + KG
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512
Query: 353 VPNFTT 358
+PN T
Sbjct: 513 IPNRMT 518
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P+ T+N +I FC+ + S+A + AEM+R+ +KPN ++ +L+ G K +
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M +K + +N ++ CK + +A L D+M +G+ PN TY+ I
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CKD N E+A YRIM G+ P+ S Y ++ +C+ GD E A E K +
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ L ++ +A L+
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLL 434
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 7/277 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ F EM+ ++ +V +N+L+ L E + + + +KP++ T+N ++
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC-LKPNIITHNALL 313
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ A + +M ++ I PN +++ L+ + K+E ED + ++M G+
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
VS YN I LC+ A+ L+ EM +K +K + +TY+ I C G ++A +
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL P+ Y TM+ CK G+ AL + G + N T L+ G
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Query: 369 ASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
K+ +A L+ GL+ + T + T +E G
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG+K + + N ++ + + + EM R+ I+P SF ++ G K K
Sbjct: 122 YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNK 181
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA---EAKALLDEMLSKGMKPNSVTYSH 291
+++ M+ G+ + V YN I CK+ K +A A+L EM + G+ PN VT++
Sbjct: 182 AGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GFCKD N A K + M+ G+ PN Y +++ +C G A + +
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
PN T +L+ G V +A EL + K+ T NV T+N
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+K + +S L++G K + D+ V + M R ++ + +N+ I+ LCK+ K +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE---EAKKFYRIMSNSGLSPNSSVYFTM 327
++++M +G+ N +TY+ I G+CK G +A + M G+ PN + +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKF 386
+ CK + A+ E +G PN T SL+ GL KV+EA L +V
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 387 TKNVDTWNEIEAG 399
N+ T N + G
Sbjct: 303 KPNIITHNALLNG 315
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG+K V+ N + L K+ + + + + EM+ + ++P ++++ I G CK G +
Sbjct: 122 YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNK 181
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE---TALGFCKESIAKGWVPNFTTMKS 361
A M G+S N Y T++ CK G A KE A G PN T
Sbjct: 182 AGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
L+ G VS A ++ + + K NV T+N + GL
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I+ LS+A S YL E++ R + I+ Y + A + F
Sbjct: 219 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 278
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM +H L + + L+ A + E +F G+ PD+ T + I +
Sbjct: 279 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL-HALGVLPDVQTCSAFIHGLLK 337
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +E+ K + P+ ++ +L++GF K+ + E ++ M G+ + +
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + LCK A+ L D M KG++P+SVTYS I G+CK N EA + M
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P+S VY +V+ CK GD E A+ +E + KG+ + +L+ G + K+
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 516
Query: 374 EAKEL 378
EA +L
Sbjct: 517 EASQL 521
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 3/265 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ ++II G +A A TF+EM + L+ A +AL+ D EV R+ +
Sbjct: 11 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KD 69
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ GI +L TYN +I C+ A IL M KPN+ +F L+ G+ +E
Sbjct: 70 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 129
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++L ME+ + Y I+ LC + + A LL++M G+KPN V YS
Sbjct: 130 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+ +G EEA++ MS SG++P+ Y ++ + K G E A + E +
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA 375
G P+ T + + G + K++EA
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEA 274
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P +Y +I C D S A +L +M +KPN + L+ G+ E + E+ ++
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 207
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M G+ + YN I L K K EA L E+ +G+KP++VT+ FI G+ K
Sbjct: 208 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 267
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA K++ M + GL PN+ +Y ++ K G+ AL + A G +P+ T
Sbjct: 268 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 327
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ + GL +V EA ++ +KEK +V T++ + +G
Sbjct: 328 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M L+ +V ++ L++ +E +R+ ++ G+ PD+ YN +I
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL-LDGMSCSGVAPDIFCYNAII 227
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
++ A + L E+ + +KP+A +FGA + G+ K K + K M +G+
Sbjct: 228 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y V I+ K EA ++ + + G+ P+ T S FI+G K+G +EA K
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + GL P+ Y +++ CK G+ E A E KG PN +LV GL
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407
Query: 369 ASKVSEAKELIGLVKEK 385
+ + A++L + EK
Sbjct: 408 SGDIQRARKLFDGMPEK 424
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ TY + C + + A EM + +KP+ ++ AL+ GF +E ++V
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ +M G+ + YNV IH LCK K +A +L M++ G KPNS T+ I G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ N A + M L P++ Y M+ +C D A ++ G PN
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+L+ G A ++ EA+ L+ G+ ++ +N I
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 226
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 9/289 (3%)
Query: 105 PDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
PD+ F ++II +A E A E+ L+ F A +L + E
Sbjct: 218 PDI----FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ F E +G+ P+ Y +I ++ + A SI + + P+ + A +
Sbjct: 274 AAKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + ++ KV ++ G+ V Y+ I CK + +A L DEM KG+
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN Y+ + G CK G+ + A+K + M GL P+S Y TM+ CK + A
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
E +KG P+ +LV G K + ++ + L +E K T
Sbjct: 453 FHEMPSKGVQPHSFVYNALV---HGCCKEGDMEKAMNLFREMLQKGFAT 498
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 131/320 (40%), Gaps = 60/320 (18%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A EM + ++ +NAL+ L + D + +++F P+ G++PD TY+
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTYS 434
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I +C+S + + A+S+ EM K ++P++ + ALV G KE E + + M +
Sbjct: 435 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 494
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAK---------------------------------- 271
G + +S +N I CK K EA
Sbjct: 495 GFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 553
Query: 272 ------------------ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
AL ++M++KG+KP+ VTY IY CK+ N EA K +
Sbjct: 554 NLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 613
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G+ +++ ++ +CK D A E G P+ +LV A K+
Sbjct: 614 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 673
Query: 374 EAKEL------IGLVKEKFT 387
EA + +GLV + T
Sbjct: 674 EATRVFEGVKSLGLVPDTTT 693
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 19/277 (6%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ A F EM ++ +NAL+ D ++ +F E + G
Sbjct: 440 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFAT 498
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L ++N +I +C+S A + EM K I P+ ++ ++ K K E+ N +
Sbjct: 499 TL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 557
Query: 240 -QMMER----------------YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+M ER G+K Y + I++ CK EA L DE++ KGM
Sbjct: 558 KEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 617
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
+ I CK + EA K M GL P+ + T+V + G + A
Sbjct: 618 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 677
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + G VP+ TT+ LV G + +A+ LI
Sbjct: 678 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 714
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ Y + LC+ ++ EAK +EM G+KP+ S I GF ++G+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+E + +M + G+ N Y +++ +CK G E A K I G PN T
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 362 LVTGLAGASKVSEAKELI 379
L+ G + A EL+
Sbjct: 121 LIEGYCREHNMGRALELL 138
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 7/288 (2%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I+L G ++N E A + M E +NAL+ + AKD+ + + E K
Sbjct: 14 AILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK 73
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ + P + TY ++ C++ + A +L EM K PN ++ +V G +E K +
Sbjct: 74 NHCL-PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLD 132
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ K+L+ M G V YN I LCK + EA+ L M + P+ V+Y+ I
Sbjct: 133 EAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVI 189
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G CK G+ + A + M+N G +P+ Y +++ CKGG+ E A+G + G
Sbjct: 190 NGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCR 249
Query: 354 PNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
PN SL+ L + +A++ L+ + + FT +V ++N GL
Sbjct: 250 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 158/363 (43%), Gaps = 46/363 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ IN L ++ + S+ L+++ R + ++ I + + E A+
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + R ++ A+N+LL AL + + + +E + G PD+ +YN I C+
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR-GFTPDVVSYNACIDGLCK 299
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMMERY------- 245
+ A ++ M + PNASS+ LV K+++ +D + V Q E+Y
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359
Query: 246 ------GMKSG----------------------VSMYNVRIHSLCKLRKCAEAKALLDEM 277
G+ G V YNV + S CK R+ +A + +M
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L + N VT++ ++G C D +A+ M + G P+ Y T+V MCK G
Sbjct: 420 LERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 478
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
AL +E++ G VP+ T +L+TGL + EA L FTK +V WN +
Sbjct: 479 AAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL-------FTKLDVALWNAM 531
Query: 397 EAG 399
G
Sbjct: 532 ILG 534
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 140/305 (45%), Gaps = 8/305 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ ++ ++ L +A + L+E++ + N + +++I+ G + + A +
Sbjct: 81 VTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPN--IYTYNVIVEGLCEERKLDEAKKML 138
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM V +N+ + L E ++ P T PD+ +Y VI C+
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDVVSYTTVINGLCK 194
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S D SA +L +M + P+ ++ +L+ GF K + E +L M + G + +
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + +L +L +A+ +L EM +G P+ V+Y+ I G CK ++AK + M
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G +PN+S Y +V +CK + + A+ +++ K + + L+ GL +
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 374 EAKEL 378
EA L
Sbjct: 375 EACAL 379
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 4/313 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I+ S+A F ++L E+ L + + + +A T+ AV+
Sbjct: 44 DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLL 103
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + ++ +N ++ L + E K++ E G PD+ TYN IK C+
Sbjct: 104 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA-VRGYFPDVVTYNSFIKGLCK 162
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A LA M + P+ S+ ++ G K + +++L M G V
Sbjct: 163 CDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVT 219
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I CK + A LLD ML G +PN V Y+ + + G+ +A+ M
Sbjct: 220 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G +P+ Y + +CK + A + +G PN ++ LV L ++
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339
Query: 374 EAKELIGLVKEKF 386
+A L+ +EK+
Sbjct: 340 DAITLVEQAREKY 352
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 35/257 (13%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+PD T+ +++ C S+ A +L M P+ + + AL++G+ K + + K
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 238 VL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
L +M++ + + + V+ N+ + LCK + +A LLDEM KG PN TY+ + G
Sbjct: 67 FLAEMVKNHCLPTVVTYTNI-VDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 297 CKDGNFEEAKKFYRIMSNSG--------------------------------LSPNSSVY 324
C++ +EAKK M+ G ++P+ Y
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSY 185
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVK 383
T++ +CK GD ++A + +G P+ T SL+ G +V A L+ ++K
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245
Query: 384 EKFTKNVDTWNEIEAGL 400
N+ +N + L
Sbjct: 246 LGCRPNMVAYNSLLGAL 262
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M KS +P+A +F L+ G + + E ++L M+ G ++YN I K +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A L EM+ P VTY++ + G CK G ++A K M + G SPN Y
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+V +C+ + A +E +G+ P+ T S + GL +V EA++ L +
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF--LARMPV 178
Query: 387 TKNVDTWNEIEAGL 400
T +V ++ + GL
Sbjct: 179 TPDVVSYTTVINGL 192
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 42/275 (15%)
Query: 73 LDRLAFSIAINKLSEANYFNG----ISQYLEELKTRPDL--QNERFHAHSIILYGQANMT 126
+D L +++ ++ L + F+ S+ L+E PD+ N +H +
Sbjct: 355 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC-----KRRQI 409
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ K+M E + V +N L+ L + + + + + G PD TY
Sbjct: 410 DKALQIHKQMLERNCCNVV-TWNILVHGLCVDDRLSDAETMLLTMVDE-GFIPDFVTYGT 467
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV----------- 235
++ A C+ S++A + E + P+ ++ AL+ G E E+
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVAL 527
Query: 236 --NKVLQMMERYGMKSGVSMYNVRIHS----------------LCKLRKCAEAKALLDEM 277
+L E G+ ++ I S L K +A+ L D
Sbjct: 528 WNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRA 587
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ G P+ + I F K G+ EEA++ + M
Sbjct: 588 VKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I+ LS+A S YL E++ R + I+ Y + A + F
Sbjct: 507 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 566
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM +H L + + L+ A + E +F G+ PD+ T + I +
Sbjct: 567 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRL-HALGVLPDVQTCSAFIHGLLK 625
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +E+ K + P+ ++ +L++GF K+ + E ++ M G+ + +
Sbjct: 626 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + LCK A+ L D M KG++P+SVTYS I G+CK N EA + M
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P+S VY +V+ CK GD E A+ +E + KG+ + +L+ G + K+
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 804
Query: 374 EAKEL 378
EA +L
Sbjct: 805 EASQL 809
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ ++II G +A A TF+EM + L+ A +AL+ D EV R+ +
Sbjct: 299 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KD 357
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ GI +L TYN +I C+ A IL M KPN+ +F L+ G+ +E
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++L ME+ + Y I+ LC + + A LL++M G+KPN V YS
Sbjct: 418 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 477
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I + +G EEA++ MS SG++P+ Y ++ + K G E A + E +
Sbjct: 478 ILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 537
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA 375
G P+ T + + G + K++EA
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEA 562
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M L+ +V ++ L++A +E +R+ ++ G+ PD+ YN +I
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL-LDGMSCSGVAPDIFCYNAII 515
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
++ A + L E+ + +KP+A +FGA + G+ K K + K M +G+
Sbjct: 516 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y V I+ K EA ++ + + G+ P+ T S FI+G K+G +EA K
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 635
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + GL P+ Y +++ CK G+ E A E KG PN +LV GL
Sbjct: 636 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695
Query: 369 ASKVSEAKELIGLVKEK 385
+ + A++L + EK
Sbjct: 696 SGDIQRARKLFDGMPEK 712
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 1/222 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P +Y +I C D S A +L +M +KPN + L+ + E + E+ ++
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M G+ + YN I L K K EA L E+ +G+KP++VT+ FI G+ K
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 555
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA K++ M + GL PN+ +Y ++ K G+ AL + A G +P+ T
Sbjct: 556 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQT 615
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ + GL +V EA ++ +KEK +V T++ + +G
Sbjct: 616 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 132/311 (42%), Gaps = 37/311 (11%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ M E + + M + K+ V + L+ AL D + KRV IE + G+ P+
Sbjct: 205 KCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEK-GLNPNE 263
Query: 182 DTYNRVIKAFCESSDSSSA------------------YSILA-----------------E 206
Y+ VI+ C+ D A Y+I+ E
Sbjct: 264 FIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEE 323
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + +KP+ ++ AL+ GF +E ++V ++ +M G+ + YNV IH LCK K
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A +L M++ G KPNS T+ I G+C++ N A + M L P++ Y
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
M+ +C D A ++ G PN L+ A ++ EA+ L+ G+
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 386 FTKNVDTWNEI 396
++ +N I
Sbjct: 504 VAPDIFCYNAI 514
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 13/309 (4%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I + L L PD+Q H ++ G+ + A++ F E+ E L V +++L+
Sbjct: 600 IFRRLHALGVLPDVQTCSAFIHGLLKNGR---VQEALKVFSELKEKGLVPDVFTYSSLIS 656
Query: 154 ALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
EV++ F + GI P++ YN ++ C+S D A + M K
Sbjct: 657 GFC---KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
++P++ ++ ++ G+ K E + + M G++ +YN +H CK +A
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L EML KG +++++ I G+CK +EA + ++ M + P+ Y T++ +
Sbjct: 774 NLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 832
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
CK G E A KE + + + T SL + G +K+ ++ E+ L ++ K V
Sbjct: 833 CKAGKMEEANLLFKEMQERNLIVDTVTYTSL---MYGYNKLGQSSEVFALFEKMVAKGVK 889
Query: 392 TWNEIEAGL 400
+E+ GL
Sbjct: 890 P-DEVTYGL 897
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 9/289 (3%)
Query: 105 PDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
PD+ F ++II +A E A E+ L+ F A +L + E
Sbjct: 506 PDI----FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ F E +G+ P+ Y +I ++ + A SI + + P+ + A +
Sbjct: 562 AAKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + ++ KV ++ G+ V Y+ I CK + +A L DEM KG+
Sbjct: 621 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 680
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN Y+ + G CK G+ + A+K + M GL P+S Y TM+ CK + A
Sbjct: 681 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 740
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
E +KG P+ +LV G K + ++ + L +E K T
Sbjct: 741 FHEMPSKGVQPHSFVYNALV---HGCCKEGDMEKAMNLFREMLQKGFAT 786
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ A F EM ++ +NAL+ D ++ +F E + G
Sbjct: 728 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFAT 786
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L ++N +I +C+S A + EM K I P+ ++ ++ K K E+ N +
Sbjct: 787 TL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 845
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ + Y ++ KL + +E AL ++M++KG+KP+ VTY IY CK+
Sbjct: 846 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 905
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N EA K + G+ +++ ++ +CK D A E G P+
Sbjct: 906 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 965
Query: 360 KSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
+LV A K+ EA + +GLV + T
Sbjct: 966 NTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 2/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F+EM + ++ +FN L+ + +E ++F E I PD TY
Sbjct: 770 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQ-IMPDHVTYTT 827
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
VI C++ A + EM +++ + ++ +L+ G+ K + +V + + M G
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K Y + I++ CK EA L DE++ KGM + I CK + EA
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K M GL P+ + T+V + G + A + + G VP+ TT+ LV G
Sbjct: 948 KLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN 1007
Query: 367 AGASKVSEAKELI 379
+ +A+ LI
Sbjct: 1008 LNDTDSEDARNLI 1020
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L+F+ I+ ++ SQ +E+ + + + + I + +A E A FKE
Sbjct: 788 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E L + +L+ YG YN++
Sbjct: 848 MQERNLIVDTVTYTSLM----------------------YG-------YNKL-------G 871
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
SS +++ +M K +KP+ ++G ++ KE+ + K+ + GM + ++++
Sbjct: 872 QSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD 931
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I +LCK EA LLDEM G+KP+ + + F + G +EA + + + +
Sbjct: 932 LLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSL 991
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
GL P+++ +V D E A K+ +
Sbjct: 992 GLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
KV M M V Y + +LCK AK +L EM KG+ PN YS I G
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGM 273
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ G+ +EA + R M GL PN+ Y + +C+ A +E G P++
Sbjct: 274 CQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY 333
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ G + E + +V N+ T+N + GL
Sbjct: 334 NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 378
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 29/231 (12%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ LD+++ + C S A +L +M R P +SS +
Sbjct: 101 GVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRT---PYSSS--------------SIL 143
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL-----DEMLSKGMKPNSVTYS 290
+ VL YG S V ++++ I S ++ EA + D +L ++ NS+
Sbjct: 144 DSVLFWFRNYGGSSPV-VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL--- 199
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ K G E K Y M ++ + + Y +V +CK GD A E K
Sbjct: 200 --LKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEK 257
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
G PN ++ G+ + EA EL + EK N T+ I AGL
Sbjct: 258 GLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGL 308
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 7/279 (2%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L Q + E A EM V FN ++L L +E R ++ +G
Sbjct: 225 LVAQGGVAE-AATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAAR-LVDRMMMHGCT 282
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY +++ C + + AY++L + + N ++ G E K ++
Sbjct: 283 PSVVTYGFLLRGLCRTRQADEAYAMLGRVP----EVNVVMLNTVIRGCLAEGKLARATEL 338
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+MM G V YN+ +H LCKL +C A +LDEM KG PN VTYS ++ FC+
Sbjct: 339 YEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 398
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +++A+ MS G S NS Y ++Y + K G + A+ +E ++G P+ T
Sbjct: 399 NGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+++ L ++ EA+ + G L++E N T+N +
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTL 497
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 12/329 (3%)
Query: 69 PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM 125
P+ H ++I ++ L + + L+E++ + P++ HS G M
Sbjct: 349 PDVH----TYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG---M 401
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A +M + +N ++ AL E R+ E K+ G KPD+ TYN
Sbjct: 402 WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM-KSQGCKPDICTYN 460
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A I + + + N ++ L+ ++++ ++ M +
Sbjct: 461 TIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLH 520
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I +LCK + LL+EM++KG+KPN+ +Y+ I CK G +A
Sbjct: 521 GCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDA 580
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + M N GL+P+ Y T++ +CK G AL ++ + P+ T L++
Sbjct: 581 LELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISW 640
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTW 393
+ +A L+ V N TW
Sbjct: 641 HCKVRLLDDASMLLDKAVSGGIVPNERTW 669
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 42/325 (12%)
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV----FIEF 171
S++ YG + RT + + + + V N ++L I E K E
Sbjct: 284 SVVTYGF--LLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEM 341
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G PD+ TYN ++ C+ SA +L EM+ K PN ++ L+ F +
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 401
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++D +L M G YN I++L K K EA L+ EM S+G KP+ TY+
Sbjct: 402 WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNT 461
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY---------------------- 329
IY C + +EA+ + + G+ N Y T+++
Sbjct: 462 IIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521
Query: 330 -------------FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+CK G+ + ++ +E + KG PN + L+ L A KV +A
Sbjct: 522 CPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDAL 581
Query: 377 ELIG-LVKEKFTKNVDTWNEIEAGL 400
EL ++ + T ++ T+N + GL
Sbjct: 582 ELSKEMLNQGLTPDIVTYNTLINGL 606
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 9/234 (3%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+ P+ + + P +YN V+ + + A + M R + P +FG +
Sbjct: 134 QMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 193
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ D +L+ M R+G +Y IH+L AEA LLDEML G + T+
Sbjct: 194 GRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTF 253
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ + G C G+ EA + M G +P+ Y ++ +C+ + A
Sbjct: 254 NDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM------ 307
Query: 350 KGWVP--NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
G VP N + +++ G K++ A EL ++ K +V T+N + GL
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 1/288 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S ++ ++ L+++ + N + + I G+ + A+R +E
Sbjct: 387 VTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQE 446
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +N ++ L E + +F + G+ + TYN +I A S
Sbjct: 447 MKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE-GVVANGITYNTLIHALLHSG 505
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ EM + S+ L+ KE + +L+ M G+K YN
Sbjct: 506 RWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYN 565
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I+ LCK K +A L EML++G+ P+ VTY+ I G CK G A + N
Sbjct: 566 MLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNE 625
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ P+ Y ++ + CK + A ++++ G VPN T +V
Sbjct: 626 NVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ +R EM H V ++N L+ AL + + +E T GIKP+ +YN
Sbjct: 508 QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDR-SMMLLEEMMTKGIKPNNFSYNM 566
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A + EM + + P+ ++ L+ G K +L+ +
Sbjct: 567 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 626
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + YN+ I CK+R +A LLD+ +S G+ PN T+ + F +
Sbjct: 627 VHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+DEH + + +N+L+ + + E R+ E + G +P++ TY+ +I C+S
Sbjct: 314 IDEHIMPNCT-TYNSLIHGYLSSGQWTEAVRILKEMSRD-GQRPNVVTYSMLIDCLCKSG 371
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A I M + KPNAS++G+L+ G+ E D+N V +M + GM+ G ++N
Sbjct: 372 LHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I++ CK + EA ++M +G P+ V Y+ I G CK G ++A + M +
Sbjct: 432 IEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GLSP+ + T+++ G +E A E + +G PN T S++ L KV+EA
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEA 551
Query: 376 KELIGLVKEKFTK-NVDTWNEIEAG 399
++L L+ K NV ++N + G
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHG 576
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 122/241 (50%), Gaps = 5/241 (2%)
Query: 163 EVKRVFIEFPKT--YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+V + + F K +GI P++ T N VI C+ A ++L +M + I PN +++
Sbjct: 267 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 326
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+L+ G+ ++ + ++L+ M R G + V Y++ I LCK AEA+ + + M+
Sbjct: 327 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQS 386
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY-ET 339
G KPN+ TY ++G+ +GN + +M +G+ P V+ +Y CK G E
Sbjct: 387 GQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEA 446
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEA 398
+L F K +G++P+ +++ GL ++ +A ++ + + ++ T+N +
Sbjct: 447 SLTFNKMQ-QQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIH 505
Query: 399 G 399
G
Sbjct: 506 G 506
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 2/229 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
LR F LL L K + + + G PD+ +Y ++K C A
Sbjct: 175 LRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEA 234
Query: 201 YSILAEM--DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
++ M D + PN S+ ++ GF+KE + M +G+ V N I
Sbjct: 235 AELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVI 294
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
LCK++ +A+A+L +M+ + + PN TY+ I+G+ G + EA + + MS G
Sbjct: 295 DGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 354
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
PN Y ++ +CK G + A I G PN +T SL+ G A
Sbjct: 355 PNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYA 403
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK-------RVFIEFPKTYG--I 177
E A+ F E+ + S+ A N LL + A V+ +F + +
Sbjct: 81 EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VN 236
PD+ T+ +I C++ + ++ L ++ + ++ A +F L+ E++ D +N
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG--MKPNSVTYSHFIY 294
VL+ M G V Y + LC +KC EA L+ M G PN V+Y+ I+
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
GF K+G+ +A + M + G+ PN +++ +CK + A ++ I + +P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N TT SL+ G + + +EA ++
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRIL 345
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 17/234 (7%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y + + A TF +M + + A+ ++ L + F + G
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD-G 492
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ T+N +I F A + EM + I PN ++F +++ +KE K +
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ +M R G K V YN IH + E LLD+ML G+KP +VT++ + G
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG- 611
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
M + GL P+ T++ C+ G E L +E + K
Sbjct: 612 ---------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGK 650
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSI-LAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++ T+ +++ C +S A +I L M P+ S+ L+ G E+K E+
Sbjct: 174 GLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEE 233
Query: 235 VNKVLQMMERYG--MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+++ MM G V Y IH K +A L +ML G+ PN VT +
Sbjct: 234 AAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSV 293
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK ++A+ + M + + PN + Y ++++ G + A+ KE G
Sbjct: 294 IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 353
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
PN T L+ L + +EA+E+ +++ N T+ + G
Sbjct: 354 RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHG 401
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
D VK + ++ G++P +N I A+C+ A +M ++ P+ ++
Sbjct: 410 DMNNVKDLMVQ----NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAY 465
Query: 220 GALVAGFYKEEKYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
++ G K + +D +++ QM++ G+ + +N IH K +A+ L EM+
Sbjct: 466 TTVIDGLCKIGRLDDAMSRFCQMIDD-GLSPDIITFNTLIHGFALHGKWEKAEELFYEMM 524
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+G+ PN T++ I K+G EA+K + +M +G PN Y TM++ G+
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ + + G P T +L+ G+
Sbjct: 585 EVMKLLDDMLLIGLKPTAVTFNTLLDGMV 613
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 23/218 (10%)
Query: 74 DRLAFSIAINKLSEANYFN-GISQYLEELKT--RPDLQNERFHAHSIILYGQANMTEHAV 130
D +A++ I+ L + + +S++ + + PD+ H L+G+ E A
Sbjct: 461 DIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK---WEKAE 517
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F EM + + +V FN+++ L E +++F P+ G KP++ +YN +I
Sbjct: 518 ELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA-GAKPNVVSYNTMIHG 576
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + + +L +M +KP A +F L+ G M G+K
Sbjct: 577 YFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPD 620
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
V I S C+ + + L EML K K +++T
Sbjct: 621 VVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV--KRVFIEFPKTYGI 177
Y NM + AV T V ++N++L A+ ++ ++ + V+ E ++ +
Sbjct: 152 YSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSR-V 210
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P++ TYN +I+ FC + EM+R PN ++ L+ + K + ++
Sbjct: 211 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 270
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L+ M GM+ + YNV I+ LC+ EA +L+EM KG P+ VTY+ + G+C
Sbjct: 271 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 330
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K+GNF +A + M +G+SP+ Y ++ MCK + A+ F + +G PN
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T +L+ G + ++EA ++ + E F+ +V T+N G
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ IN L + LEE+ + +E + + Y + A+ E
Sbjct: 285 ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 344
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + SV + AL+ ++ A++ F + + G++P+ TY +I F
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQG 403
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ AY IL EM P+ ++ A + G E+ E+ V+Q M G+ V Y+
Sbjct: 404 LLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYS 463
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I C+ + A + EM+ KG+ P++VTYS I G C+ EA + M +
Sbjct: 464 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y T++ C GD AL E I KG++P+ T L+ GL ++ EA
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Query: 376 KELI 379
K L+
Sbjct: 584 KRLL 587
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 17/312 (5%)
Query: 97 YLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLA 154
Y E +++R + + ++I++ G ++ E + F EM+ + +V +N L+ A
Sbjct: 202 YREMIRSR---VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258
Query: 155 LTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
Y ++ R+ ++ + G++P+L +YN +I C A+ IL EM
Sbjct: 259 ------YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY 312
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
K P+ ++ L+ G+ KE + + M R G+ V Y I+S+CK R
Sbjct: 313 KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNR 372
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A D+M +G++PN TY+ I GF + G EA + M+ SG SP+ Y ++
Sbjct: 373 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 432
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTK 388
C E ALG +E + KG P+ + ++++G ++ A ++ +V++ +
Sbjct: 433 GHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSP 492
Query: 389 NVDTWNEIEAGL 400
+ T++ + GL
Sbjct: 493 DAVTYSSLIQGL 504
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 142/355 (40%), Gaps = 51/355 (14%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +A N ++ ++++ R NER + I + + + A R E
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E SV +NA + + + +E V E + G+ PD+ +Y+ +I FC
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKG 473
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A+ + EM K + P+A ++ +L+ G + + + + Q M G+ Y
Sbjct: 474 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 533
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS------------------------- 290
I++ C +A L DEM+ KG P++VTYS
Sbjct: 534 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 593
Query: 291 -------------------------HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
I GFC G EA + + M P +VY
Sbjct: 594 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 653
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+++ C+GG+ A KE I G+VP+ T+ +L+ L E E+IG
Sbjct: 654 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 708
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KEM K++ +V FN ++ AL + + V +E K YG P++ +YN +I +C
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV-MEDMKVYGYSPNVVSYNTLIDGYC 269
Query: 193 ESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ + Y ++L EM + PN ++F L+ GF+K++ KV + M +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V YN I+ LC K EA + D+M+S G++PN +TY I GFCK+G +EA +
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ G P + +Y ++ CK G + +E +G VP+ T L+ GL
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 370 SKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ AK+L + K ++ T++ + G
Sbjct: 450 GNIEAAKKLFDQLTNKGLPDLVTFHILMEG 479
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 7/332 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
F++ IN L + N +E++K P++ + G A
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
KEM E+++ ++ FN L+ + +VF E + P++ TYN +I C
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQ-DVIPNVITYNSLINGLC 342
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + +M ++PN ++ +L+ GF K ++ + ++ G +
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTR 402
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
MYN+ I + CKL K + AL +EM +G+ P+ TY+ I G C++GN E AKK + +
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+N GL P+ + ++ C G+ A KE G P T ++ G +
Sbjct: 463 TNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNL 521
Query: 373 SEAKEL-IGLVKEKFTK-NVDTWNEIEAGLPQ 402
A + + KE+ + NV ++N + G Q
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG K + ++ A + + S+ + EM R+ I+PN +F ++ K K
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKL---RKCAEAKALLDEMLSKGMKPNSVTYSH 291
V++ M+ YG V YN I CKL K +A A+L EM+ + PN T++
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GF KD N + K ++ M + + PN Y +++ +C GG A+G + ++ G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
PN T SL+ G + EA ++ VK + T+
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTR 398
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
TRP R + I Y + + +EM+ + VG +N L+ L + +
Sbjct: 397 TRP---TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
K++F + G+ PDL T++ +++ +C +S A +L EM + +KP ++ +
Sbjct: 454 AAKKLFDQLTNK-GL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIM 511
Query: 223 VAGFYKEEKYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+ G+ KE + N QM + ++ V+ YNV + + K +A LL+EML KG
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 282 MKPNSVTY 289
+ PN +TY
Sbjct: 572 LVPNRITY 579
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G +P YN +I A+C+ +++ EM+R+ I P+ ++ L+AG +
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E K+ + G+ V+ +++ + C + +A LL EM G+KP +TY+
Sbjct: 453 EAAKKLFDQLTNKGLPDLVT-FHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIM 511
Query: 293 IYGFCKDG------------------------------------NFEEAKKFYRIMSNSG 316
+ G+CK+G E+A M G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 317 LSPNSSVY 324
L PN Y
Sbjct: 572 LVPNRITY 579
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 139/271 (51%), Gaps = 5/271 (1%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFP 172
+I+++G +AN A + +EM E + V +N+L+ L K Y+ E R +E
Sbjct: 177 NILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGL--CKSYRMEEARQLLETM 234
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++P+L TYN +I +C++ + A+ ++ M + P+ +F +L++GF ++ K
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ +VL +M++ + YNV I LC + EA LL EM +G+ P+ +TY+
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I FC++ E+A + +M G+ P+ Y T+ + K ++ A G
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+PN T SL+ GL + ++ EA+ L+ +++
Sbjct: 415 IPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 9/256 (3%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD--TYNRVIKAFCESSDSSSAYSILAE 206
N LL L A+ + + ++F + + G D + TYN +I FC++ D A+ +LAE
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRD--ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLR 265
M + P+ + ++V ++++ +Q E ++N+ +H LCK
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNT---GNLSRAMQYFRESVECAPDSVLFNILVHGLCKAN 187
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ +EA+ +++EM +G+ P+ VTY+ I G CK EEA++ M + PN Y
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T++Y CK G A + I G P+ T SL++G SK+ +A E++ L+K+
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307
Query: 386 FTK-NVDTWNEIEAGL 400
N+ T+N + +GL
Sbjct: 308 LCAPNLVTYNVLISGL 323
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 3/266 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E A + EM E V ++++ AL + + R F ++ P
Sbjct: 115 FCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALC---NTGNLSRAMQYFRESVECAP 171
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D +N ++ C+++ S A ++ EM + I P+ ++ +L+ G K + E+ ++L
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + ++ + YN I+ CK A L++ M+ G P+ VT++ I GFC+
Sbjct: 232 ETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQK 291
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
++A + +M +PN Y ++ +C G A E +G +P+ T
Sbjct: 292 SKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITY 351
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
SL+ ++ +A ++ L+ E+
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVER 377
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 13/304 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYG--QANMTEH 128
D + ++ I+ L ++ Q LE + K RP+L ++ ++YG + T
Sbjct: 207 DVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT-----YNTLIYGYCKTGCTGL 261
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + + M + V FN+L+ + V + K P+L TYN +I
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV-LHLMKKGLCAPNLVTYNVLI 320
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM-ERYGM 247
C++ ++ A +L+EMD + I P+ ++ +L+ F + + E ++ +M ER +
Sbjct: 321 SGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
G+S + + +L K + EA ALLD M G PN T++ + G C +EA+
Sbjct: 381 PDGISYCTLAV-ALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+M G P +S Y +V +CK G + A +++G P ++ ++V LA
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499
Query: 368 GASK 371
K
Sbjct: 500 REGK 503
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ L A E + E GI PD+ TYN +I FC + A+ I M
Sbjct: 316 YNVLISGLCDAGRANEACELLSEM-DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLM 374
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + P+ S+ L K E++++ +L M G + +N + LC R+
Sbjct: 375 VERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRL 434
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ LL M G P + TY + G CK G ++AK+ +M + G+ P S T+
Sbjct: 435 DEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTI 494
Query: 328 VYFMCKGGDYETALGFCKESIA---KGWVPNFTTMKSLV 363
V+ + + G + AL + + +A K P++ + V
Sbjct: 495 VHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFV 533
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 5/220 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +++ I+ L +A N + L E+ R L + + I ++ + E A +
Sbjct: 314 VTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCE 193
M E + ++ L +AL ++ + E F + G P+L T+N +++ C
Sbjct: 374 MVERGVIPDGISYCTLAVALLKSERFDEA---FALLDNMFDAGAIPNLFTFNSLMEGLCC 430
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A +LA M R P AS++ LV G K + +D +VL MM G++ VS
Sbjct: 431 SRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSS 490
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+H+L + K A D++++ K +Y +
Sbjct: 491 SGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++ G++ D+ TY +I+ C++++ A ++ EM I+PN + +L+ G+ K ++
Sbjct: 142 RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRW 201
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
EDV KV M G++ V MY I SLCK+ K +A ++D M+ +G++PN VTY+
Sbjct: 202 EDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL 261
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI-AKG 351
I CK+G+ +EA + MS G++P+ Y T++ + + + A+ +E + K
Sbjct: 262 INCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN 321
Query: 352 WV-PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
V PN T S++ GL ++ +A ++ +++E N+ T+N + GL
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI-KPDLDTY 184
+ A+ K+M E + V +N L+ L+ + E + E + I KP++ T+
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI+ C+ A+ + A M+ N ++ L+ G + K +++ M
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP-------------------- 284
G++ Y++ I CK+ + A+ LL M +G++P
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 285 --------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ V YS I+G CK G+ + AK+ + + + GL+P++ Y ++
Sbjct: 451 ARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
K GD E A G K+ A G++P+ SL+ G + ++++ ELI +E TKN+
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI---REMITKNI 567
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M L +V +N L+ + KE V + + G+ PD+ TYN +IK +
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK-GVAPDVVTYNTLIKGLSDVL 304
Query: 196 DSSSAYSILAEMDRKS--IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM R +KPN +F +++ G + +V MME G +
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I L ++ K +A L+DEM S G++P+S TYS I GFCK + A+ M
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P Y ++ MC+ G E A E + + + +++ G A +
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLK 483
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
AKEL+ +V E T + T++
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYS 505
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P+ +Y +++A C + A +L M ++ + ++G L+ G + + +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M G++ V +Y+ + CK + + + EM KG++P+ V Y+ I C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G ++A +M GL PN Y ++ MCK G + A+G K+ KG P+
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 358 TMKSLVTGLAGASKVSEAKELI-GLVKEK--FTKNVDTWNEIEAGL 400
T +L+ GL+ ++ EA L+ +V+ K NV T+N + GL
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGL 337
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 172/430 (40%), Gaps = 55/430 (12%)
Query: 17 KHHRYLATSSILSSGDKTPLTSKDKT--RAALTLLKSESNPEKILEICRAAALTPESHL- 73
+H R L S D P + +D LT L + ++ + RA +L P
Sbjct: 54 RHLRLLPLGEATSLLDALP-SVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR 112
Query: 74 -DRLAFSIAINKLSE---ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE-- 127
+ +++++ + L A+ G+ + + R D+ + ++ G + E
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVT-----YGTLIRGLCDAAEVD 167
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
AV EM E + +V +++LL + +++V +VF+E + GI+PD+ Y +
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK-GIEPDVVMYTGL 226
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I + C+ + A+ ++ M R+ ++PN ++ L+ KE ++ VL+ M G+
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG---MKPNSVTYSHFIYGFCKDGNFEE 304
V YN I L + + EA LL+EM+ +G +KPN VT++ I G C G +
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 305 AKKFYRIMSNSG-----------------------------------LSPNSSVYFTMVY 329
A + +M +G L P+S Y ++
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
CK + A +G P L+ + + A+ L + F +
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLD 465
Query: 390 VDTWNEIEAG 399
V ++ + G
Sbjct: 466 VVAYSTMIHG 475
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 7/308 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D + ++ I LS+ + LEE+ ++ + ++ G ++ A +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
M+E ++ +N L+ L ++ + E + G++PD TY+ +IK F
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM-TSLGLEPDSFTYSILIKGF 407
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A +L+ M + I+P + L+ ++ E + M+ V
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDV 466
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ IH CK AK LL ++ +G+ P++VTYS I F K G+ E A +
Sbjct: 467 VAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQ 526
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M+ SG P+ +V+ +++ G+ L +E I K + + +L T L +
Sbjct: 527 MTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS-- 584
Query: 372 VSEAKELI 379
+E K L+
Sbjct: 585 -NEGKALL 591
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L ++ R G + N + +L EA +LLD + S ++V+Y+ + C+
Sbjct: 37 LAVLHRRGRAEAAACLNRHL----RLLPLGEATSLLDALPSV---RDAVSYNTVLTALCR 89
Query: 299 DGNFEEAKKFYRIMS---NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
G+ + A R MS + PN+ Y ++ +C + A+G + + G +
Sbjct: 90 RGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRAD 149
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L+ GL A++V +A EL+G + + NV ++ + G
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 5/297 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P L+ F S++ +AN + + + F M + V F+ ++ A +
Sbjct: 160 PSLKTCNFLLSSLV---KANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+F + K G+ P++ TYN +I C++ A+ +M+++ +KP+ ++G L+
Sbjct: 217 IELFRKMEKV-GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLIN 275
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G K E++++ N +L+ M G +YN I C++ + A + D+M+S G+ P
Sbjct: 276 GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISP 335
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
NSVT + I G+CK E A+ M G N + ++++ +C +++AL F
Sbjct: 336 NSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFI 395
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
E + + + PN + LV+GL K SEA EL L+++ F N T N + GL
Sbjct: 396 MEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 44/317 (13%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A + KEM E L ++N L+LA +E ++ E + GI+PD+
Sbjct: 454 EAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR-GIQPDM 512
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C A + E + P+A ++G ++ G+ K + E+ K+ Q
Sbjct: 513 YTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572
Query: 242 MERYGMKSGVSMY-----------NVR------------------------IHSLCKLRK 266
M ++ +Y N+R IH L +
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A LLDEM +G+ PN V Y+ I G+CK G + + MS + + PN Y
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-- 384
M+ CK G+ + A E KG VP+ T +L G K+ EA ++ L+
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752
Query: 385 ------KFTKNVDTWNE 395
+T +D W++
Sbjct: 753 ISLDDITYTTLIDGWHK 769
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P L T N ++ + ++++ +Y + M + P+ F +V F + +D
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + ME+ G+ V YN IH LCK + EA ++M + +KP+ VTY I G
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K F+EA + MS+ G +PN+ VY T++ C+ G+ TAL + I+ G PN
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T SL+ G ++++ A+ L+
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLL 360
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + T N +I CE+ A +L EM + + ++ S+ L+ KE K E+
Sbjct: 437 GFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEG 496
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ + M R G++ + YN+ +H LC + K EA L E G P++ TY I G
Sbjct: 497 FKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDG 556
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK EE +K ++ M + N+ VY T++ C+ G+ A + ++G
Sbjct: 557 YCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SL+ GL+ V A +L+ + KE + NV + + G
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGG 661
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 2/322 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + + IN L + F+ + L+E+ R N + I Y + A++ +
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + + N+L+ + + + + E G+ + T+ VI C
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVI-NQGTFTSVIHRLCLKC 386
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
SA + EM ++ KPN LV+G + K + ++ + G + N
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LC+ EA LL EML +G+ +S++Y+ I CK+G EE K M
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ P+ Y +++ +C G E A G E G P+ T ++ G A++V E
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566
Query: 376 KELIG-LVKEKFTKNVDTWNEI 396
++L +V K +N + +
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTL 588
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+K + V ++ ++ G+ + N + SL K + + + D M G+ P+
Sbjct: 138 FKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDV 197
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+S + FC G ++A + +R M G++PN Y +++ +CK G + A F KE
Sbjct: 198 YLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF-KE 256
Query: 347 SIAKGWV-PNFTTMKSLVTGLAGASKVSEAKELI 379
+ K V P+ T L+ GL + EA ++
Sbjct: 257 KMEKERVKPSLVTYGVLINGLVKLERFDEANCIL 290
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++ G++ D+ TY +I+ C++++ A ++ EM I+PN + +L+ G+ K ++
Sbjct: 142 RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRW 201
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
EDV KV M G++ V MY I SLCK+ K +A ++D M+ +G++PN VTY+
Sbjct: 202 EDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL 261
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI-AKG 351
I CK+G+ +EA + MS G++P+ Y T++ + + + A+ +E + K
Sbjct: 262 INCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN 321
Query: 352 WV-PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
V PN T S++ GL ++ +A ++ +++E N+ T+N + GL
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI-KPDLDTY 184
+ A+ K+M E + V +N L+ L+ + E + E + I KP++ T+
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI+ C+ A+ + A M+ N ++ L+ G + K +++ M
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP-------------------- 284
G++ Y++ I CK+ + A+ LL M +G++P
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 285 --------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ V YS I+G CK G+ + AK+ + + + GL+P++ Y ++
Sbjct: 451 ARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
K GD E A G K+ A G++P+ SL+ G + ++++ ELI +E TKN+
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI---REMITKNI 567
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M L +V +N L+ + KE V + + G+ PD+ TYN +IK +
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK-GVAPDVVTYNTLIKGLSDVL 304
Query: 196 DSSSAYSILAEMDRKS--IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM R +KPN +F +++ G + +V MME G +
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I L ++ K +A L+DEM S G++P+S TYS I GFCK + A+ M
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P Y ++ MC+ G E A E + + + +++ G A +
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLK 483
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
AKEL+ +V E T + T++
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYS 505
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 172/430 (40%), Gaps = 55/430 (12%)
Query: 17 KHHRYLATSSILSSGDKTPLTSKDKT--RAALTLLKSESNPEKILEICRAAALTPESHL- 73
+H R L S D P + +D LT L + ++ + RA +L P
Sbjct: 54 RHLRLLPLGEATSLLDALP-SVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR 112
Query: 74 -DRLAFSIAINKLSE---ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE-- 127
+ +++++ + L A+ G+ + + R D+ + ++ G + E
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVT-----YGTLIRGLCDAAEVD 167
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
AV EM E + +V +++LL + +++V +VF+E + GI+PD+ Y +
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK-GIEPDVVMYTGL 226
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I + C+ + A+ ++ M R+ ++PN ++ L+ KE ++ VL+ M G+
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG---MKPNSVTYSHFIYGFCKDGNFEE 304
V YN I L + + EA LL+EM+ +G +KPN VT++ I G C G +
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 305 AKKFYRIMSNSG-----------------------------------LSPNSSVYFTMVY 329
A + +M +G L P+S Y ++
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
CK + A +G P L+ + + A+ L + F +
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLD 465
Query: 390 VDTWNEIEAG 399
V ++ + G
Sbjct: 466 VVAYSTMIHG 475
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 7/308 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D + ++ I LS+ + LEE+ ++ + ++ G ++ A +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
M+E ++ +N L+ L ++ + E + G++PD TY+ +IK F
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM-TSLGLEPDSFTYSILIKGF 407
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A +L+ M + I+P + L+ ++ E + M+ V
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDV 466
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ IH CK AK LL ++ +G+ P++VTYS I F K G+ E A +
Sbjct: 467 VAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQ 526
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M+ SG P+ +V+ +++ G+ L +E I K + + +L T L +
Sbjct: 527 MTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS-- 584
Query: 372 VSEAKELI 379
+E K L+
Sbjct: 585 -NEGKALL 591
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G ++ A+ K+M++ K+ V +N ++ AL K+ +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDL---ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E GI+P++ TYN +I+ C S A +L++M + I PN +F AL+
Sbjct: 275 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN VTY+ I GFCK +E + +R MS GL N+ Y T+++ + + + A
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ ++ G +P+ T L+ GL KV A + L + K ++ T+N + G+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R +M E K+ +V F+AL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLI 368
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K PN ++ L+ GF K ++ ++ ++ + M + G+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y IH + R+C A+ + +M+S G+ P+ +TYS + G C +G E A
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ + S + P+ Y M+ MCK G E FC S+ KG PN T ++++G
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFC 547
Query: 368 GASKVSEAKELIGLVKEK 385
EA L +KE+
Sbjct: 548 RKGLKEEADALFREMKEE 565
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F +M + + S+ F+ LL A+ + V + E + GI +L TY+
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLG-EQMQNLGISHNLYTYSI 121
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++LA+M + +P+ + +L+ GF + D ++ M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N IH L + + +EA AL+D M+ KG +P+ VTY + G CK G+ + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + P +Y T++ +C + AL E KG PN T SL+ L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T++ +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 10/288 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE----VKRVFIEFPKTY 175
+ N AV +M E + FN L+ L E V R+ ++
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK----- 215
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PDL TY V+ C+ D A S+L +M++ I+P + ++ + D
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G++ V YN I LC + ++A LL +M+ + + PN VT+S I
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K+G EA+K Y M + P+ Y +++ C + A + I+K PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T +L+ G A +V E EL + ++ N T+ + G Q
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + + EM + + + +++L+ + E K +F E + P++ TYN +I
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLI 403
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K FC++ + EM ++ + N ++ L+ GF++ + ++ V + M G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y++ + LC K A + + + M+P+ TY+ I G CK G E+
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +S G+ PN Y TM+ C+ G E A +E +G +P+ T +L+
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 369 ASKVSEAKELI 379
+ + ELI
Sbjct: 584 DGDKAASAELI 594
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V +N L+ AK E +F E + G+ + TY
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTT 436
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ + +A + +M + P+ ++ L+ G K E V + ++R
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN VTY+ + GFC+ G EEA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G P+S Y T++ + GD + +E + +V + +T+ LVT +
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNM 615
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 12/290 (4%)
Query: 101 LKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
+K PDL +SI++ + + EH TF + + R + N LL L A
Sbjct: 88 IKVTPDLC-----TYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDA 142
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL---AEMDRKSIKPN 215
K +E + I+ G PD+ +YN ++K FC + A +L A+ +S PN
Sbjct: 143 KRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPN 202
Query: 216 ASSFGALVAGFYKEEKYEDV-NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
S+ ++ GF+ E + + N L+MM+R G++ V Y I LCK + A+ +
Sbjct: 203 VVSYATVINGFFTEGQVDKAYNLFLEMMDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+M+ KG+KP++ TY+ I+G+ G ++E + MS GL P+ Y +++ ++C
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G A F I KG PN L+ G A +SE +L+ L+ E
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVE 371
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA-LTIAKDYKEVKRVFIEFPKTYGIKPD 180
+A + + A F++M + ++ +N L+ L+I K +KEV R+ E +G+KPD
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEM-SAHGLKPD 307
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY ++ C + A M RK IKPN + +G L+ G+ + +++ +L
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN 367
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+M G+ ++N+ + K EA + ++M +G+ P+ V + I CK G
Sbjct: 368 LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLG 427
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++A + M N G++PN V+ ++VY +C +E A F E + +G P+
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTK 388
+++ L +V +A+ LI L++ T+
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTR 515
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E+ L FN + A E +F + K G+ PD+ + +I A C+
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNFGALIDALCKLG 427
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +M + + PN F +LV G +K+E + M G++ V +N
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LC + +A+ L+D M G +P+ ++Y+ I G C G +EA K +M +
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y T+++ C+ G + A G +E + G P T +++ GL + SEA
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 376 KEL-IGLVKEKFTKNVDTWNEIEAGLPQ 402
KEL + ++ N+ +N I GL +
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSK 635
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P++ TY VI C++ A + +M K +KP+ ++ L+ G+ K+++V
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ M +G+K Y ++ LC +C EA+ D M+ KG+KPN Y I+G
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHG 352
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G E +M +GLSP+ ++ + K + A+ + +G P+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 356 FTTMKSLVTGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEIEAGL 400
+L+ L +V +A + ++ E N+ +N + GL
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 152/356 (42%), Gaps = 17/356 (4%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINK--LSEANY-FNGISQYLEELKTRPDLQN 109
S +L + L+P+ H+ + F+ K + EA + FN + Q PD+ N
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ----GLSPDVVN 415
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
++ G+ + AV F +M + ++ FN+L+ L +++ K +
Sbjct: 416 FGALIDALCKLGRV---DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E GI+PD+ +N ++ C A ++ M+R +P+ S+ L+ G
Sbjct: 473 EMLNQ-GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLV 531
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ ++ K L +M G+K YN +H C+ + +A + EML G+ P VTY
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
S ++G F EAK+ Y M SG N +Y ++ + K + A + +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
K + TT ++ L + + +A L GLV + FT + N IE G
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 35/202 (17%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+KPD TYN ++ +C + AY + EM R I P ++ ++ G + ++
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK------------- 280
+ ++ M G + + +YN+ ++ L K EA L + SK
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI 665
Query: 281 ----------------------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
G+ P+ TY ++G EE + M SG +
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 319 PNSSVYFTMVYFMCKGGDYETA 340
PNS + +V + GD A
Sbjct: 726 PNSRMLNALVRRLLHRGDITRA 747
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKS---IKPNASSFGALVAGFYKEEKYEDVNK 237
L +RV +++S S+ M R+ + P+ ++ L+ F + + E
Sbjct: 56 LTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFA 115
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA-KALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + G + + N + LC ++ EA L+ M G P+ V+Y+ + GF
Sbjct: 116 TFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGF 175
Query: 297 CKDGNFEEAKKFYRIMSNS---GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
C + EEA + +M++S PN Y T++ G + A E + +G
Sbjct: 176 CNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQ 235
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV----DTWNEIEAG 399
PN T +++ GL A V A+ G+ ++ K V DT+N + G
Sbjct: 236 PNVVTYTTVIDGLCKAQVVDRAE---GVFQQMIDKGVKPDNDTYNCLIHG 282
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/214 (17%), Positives = 84/214 (39%), Gaps = 1/214 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A F+EM + + V ++ +L L + + E K +++ T G +
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI-TSGKQW 621
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN ++ +++ A+ + + K + ++F ++ +K + ED +
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ YG+ V Y + +L + E L M G PNS + +
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHR 741
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
G+ A + + S +S ++ + +
Sbjct: 742 GDITRAGAYLSKLDEKNFSLEASTTAMLISLLSR 775
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ K+M++ K+ V + ++ AL K+ + +F E GI+P++ TYN +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLI 297
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C S A +L++M + I PN +F AL+ F KE K + K+ M + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ I+ C + EAK + + M+SK PN VTY+ I GFCK EE +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS GL N+ Y T++ + + GD + A K+ ++ G P+ T L+ GL
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L K K ++ T+N + G+
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 7/295 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RP++ + YG+ + A R +M E K+ +V F+AL+ A E
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
++++ E K I PD+ TY+ +I FC A + M K PN ++ L+
Sbjct: 344 AEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF K ++ E+ ++ + M + G+ YN I L + C A+ + +M+S G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG- 342
P+ +TYS + G CK G E+A + + S + P+ Y M+ MCK G E
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEI 396
FC S+ KG PN ++++G EA L +KE T N T+N +
Sbjct: 523 FCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M + + + FN L+ L + E I+ G +P
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQP 218
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D A S+L +M++ I+ + + ++ Y++VN L
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC---NYKNVNDAL 275
Query: 240 QM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M+ G++ V YN I LC + ++A LL +M+ + + PN VT+S I F
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K+G EA+K Y M + P+ Y +++ C + A + I+K PN
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T +L+ G A +V E EL + ++ N T+N + GL Q
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F EM + + S+ FN LL A+ + V + E + I DL +YN
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG-ERMQNLRISYDLYSYNI 120
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S A ++L +M + +P+ + +L+ G+ ++ + ++ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N IH L K +EA AL+D M+++G +P+ TY + G CK G+ + A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + + +Y T++ +C + AL E KG PN T SL+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T++ +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V +N L+ AK +E +F E + G+ + TYN
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNT 435
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I +M + P+ ++ L+ G K K E V + +++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN + Y+ I GFC+ G EEA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G PNS Y T++ + GD + KE + G+V + +T+ ++ L
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + + EM + + + +++L+ + E K +F E + P++ TYN +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 401
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IK FC++ + EM ++ + N ++ L+ G ++ + K+ + M G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y++ + LCK K +A + + + M+P+ TY+ I G CK G E+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +S G+ PN +Y TM+ C+ G E A +E G +PN T +L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 368 GASKVSEAKELI 379
+ + ELI
Sbjct: 582 RDGDKAASAELI 593
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E + F+EM + L + +N L+ L A D +++F + G+ P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ ++ C+ A + + + ++P+ ++ ++ G K K ED +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K V +Y I C+ EA AL EM G PNS TY+ I +D
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+ + + + M + G ++S +MV M G E
Sbjct: 584 GDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLE 621
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K +A L EM+ P+ V ++ + K F+ M N +S + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
++ C+ AL + + G+ P+ T+ SL+ G ++SEA L+ +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 385 KFTKNVDTWNEIEAGL 400
++ N T+N + GL
Sbjct: 180 EYQPNTVTFNTLIHGL 195
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 7/262 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N LL L K ++ V+ E + GIKPD+ T+N ++KA C + +A +L E
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGER-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 210
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + P+ ++F L+ GF +E + +V M G NV I+ CKL +
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A + + ++ G +P+ +TY+ F+ G C++G+ A K +M G P+ Y
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------G 380
+V +CK G E A G + + +G +P+ TT +L+ L +++ EA +L G
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 381 LVKEKFTKNVDTWNEIEAGLPQ 402
L + +T N+ + G PQ
Sbjct: 391 LSPDVYTFNILINALCKVGDPQ 412
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 1/278 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++I +N L + L ++ R L + I+ N E A+
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+++ L V FN L+ AL D + R+F E K+ G PD TYN +I C
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLIDNLCS 442
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L EM+ + ++ ++ G K+ + E+ +V M+ G+
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I LCK ++ +A L+ +M+S+G++PN++TY+ + +CK G+ ++A + M+
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+G + Y T++ +CK G + AL + KG
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 7/309 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D++ ++ +N L + + + ++ + PD+ + + GQ E A
Sbjct: 289 DQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ---LEEAK 345
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M E + FN L++AL +E + + G+ PD+ T+N +I A
Sbjct: 346 GILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV-TLKGLSPDVYTFNILINA 404
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ D A + EM P+ ++ L+ K +L+ ME G
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I LCK + EA+ + D+M +G+ N++T++ I G CKD ++A +
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLIS 524
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL PN+ Y +++ CK GD + A + A G+ + T +L+ GL A
Sbjct: 525 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAG 584
Query: 371 KVSEAKELI 379
+ A +L+
Sbjct: 585 RTQVALKLL 593
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ EM E ++ V FN L+ AL A + + +E + G+ PD T+ +++ F
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVR-TAVLMLEEMSSSGVAPDETTFTTLMQGF 230
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED----------------- 234
E +A + A M P + L+ G+ K + ED
Sbjct: 231 VEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290
Query: 235 ------VN------------KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
VN KV+ +M + G V YN+ ++ LCK + EAK +L++
Sbjct: 291 ITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ +G P+ T++ I C EEA R ++ GLSP+ + ++ +CK GD
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNE 395
+ AL +E + G P+ T +L+ L K+ +A +L+ ++ ++ T+N
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 396 IEAGL 400
I GL
Sbjct: 471 IIDGL 475
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD TYN + C++ A ++ M ++ P+ ++ +V K + E+
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L M G ++ +N I +LC + EA L ++ KG+ P+ T++ I
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G+ + A + + M +SG +P+ Y T++ +C G AL KE + G +
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
T +++ GL ++ EA+E+ + + ++N T+N + GL
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 510
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ K+M++ K+ V + ++ AL K+ + +F E GI+P++ TYN
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNS 279
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C S A +L++M + I PN +F AL+ F KE K + K+ M +
Sbjct: 280 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + Y+ I+ C + EAK + + M+SK PN VTY+ I GFCK EE
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +R MS GL N+ Y T++ + + GD + A K+ ++ G P+ T L+ GL
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L K K ++ T+N + G+
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 7/295 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RP++ + YG+ + A R +M E K+ +V F+AL+ A E
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 327
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
++++ E K I PD+ TY+ +I FC A + M K PN ++ L+
Sbjct: 328 AEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF K ++ E+ ++ + M + G+ YN I L + C A+ + +M+S G+
Sbjct: 387 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 446
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG- 342
P+ +TYS + G CK G E+A + + S + P+ Y M+ MCK G E
Sbjct: 447 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 506
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEI 396
FC S+ KG PN ++++G EA L +KE T N T+N +
Sbjct: 507 FCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 560
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M + + + FN L+ L + E I+ G +P
Sbjct: 144 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQP 202
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D A S+L +M++ I+ + + ++ Y++VN L
Sbjct: 203 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC---NYKNVNDAL 259
Query: 240 QM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M+ G++ V YN I LC + ++A LL +M+ + + PN VT+S I F
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K+G EA+K Y M + P+ Y +++ C + A + I+K PN
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 379
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T +L+ G A +V E EL + ++ N T+N + GL Q
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 426
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F EM + + S+ FN LL A+ + V + E + I DL +YN
Sbjct: 46 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG-ERMQNLRISYDLYSYNI 104
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S A ++L +M + +P+ + +L+ G+ ++ + ++ M
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N IH L K +EA AL+D M+++G +P+ TY + G CK G+ + A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + + +Y T++ +C + AL E KG PN T SL+ L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T++ +
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSAL 315
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V +N L+ AK +E +F E + G+ + TYN
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNT 419
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I +M + P+ ++ L+ G K K E V + +++
Sbjct: 420 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 479
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN + Y+ I GFC+ G EEA
Sbjct: 480 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 539
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G PNS Y T++ + GD + KE + G+V + +T+ ++ L
Sbjct: 540 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + + EM + + + +++L+ + E K +F E + P++ TYN +
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 385
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IK FC++ + EM ++ + N ++ L+ G ++ + K+ + M G+
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y++ + LCK K +A + + + M+P+ TY+ I G CK G E+
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +S G+ PN +Y TM+ C+ G E A +E G +PN T +L+
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565
Query: 368 GASKVSEAKELI 379
+ + ELI
Sbjct: 566 RDGDKAASAELI 577
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E + F+EM + L + +N L+ L A D +++F + G+ P
Sbjct: 389 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPP 447
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ ++ C+ A + + + ++P+ ++ ++ G K K ED +
Sbjct: 448 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 507
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K V +Y I C+ EA AL EM G PNS TY+ I +D
Sbjct: 508 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 567
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+ + + + M + G ++S +MV M G E
Sbjct: 568 GDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLE 605
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K +A L EM+ P+ V ++ + K F+ M N +S + Y
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
++ C+ AL + + G+ P+ T+ SL+ G ++SEA L+ +
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 385 KFTKNVDTWNEIEAGL 400
++ N T+N + GL
Sbjct: 164 EYQPNTVTFNTLIHGL 179
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 146/308 (47%), Gaps = 37/308 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R +EM ++ ++ +NAL+ + D ++ + E GIKPD TYN +I
Sbjct: 360 AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV-GIKPDTQTYNNMI 418
Query: 189 KAFCESSDSSSAYSILAEMDRKS-----------------------------------IK 213
+ + + ++S +L+EM + + +K
Sbjct: 419 EGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK 478
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PNA + L+ G +E ++++ ++L++M++ G++ V YN I LCK RK EAK
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM+ +G+KPN TY I+G+CK G + A ++++ M G++PN V ++ CK
Sbjct: 539 LVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK 598
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDT 392
G A + + + P+ T +L+ GL K+ A EL+ EK +V T
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658
Query: 393 WNEIEAGL 400
+N I +G
Sbjct: 659 YNSIISGF 666
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + AVR K MD+ ++ V +N++++ L ++ +E K +E + G+KP++
Sbjct: 493 QEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER-GLKPNV 551
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I +C+S + A EM I PN AL+ G+ KE + + +
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + V Y+ IH L + K A LL E L KG+ P+ TY+ I GFCK G
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+A + + M G+SPN Y ++ +CK G+ E A KG N T +
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731
Query: 362 LVTGLAGASKVSEAKEL 378
++ G + +S+A L
Sbjct: 732 IIDGYCKSGNLSKAFRL 748
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PD Q + + I Y + T EM + L + ++ L ++
Sbjct: 408 KPDTQT---YNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
RVF E + G+KP+ Y +IK + A IL MD+K ++P+ + +++
Sbjct: 465 ASRVF-EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K K E+ L M G+K V Y IH CK + A EML G+
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIA 583
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN V + I G+CK+G+ EA +R M + P+ Y +++ + + G + A+
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
E + KG VP+ T S+++G + +A +L + +K + N+ T+N + GL
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 8/289 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
L++L + L + F +SI++ +G+ A +EM L+ A+ AL+
Sbjct: 293 LKKLMDKKGLVADVF-TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGF 351
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
D E RV E G+K +L TYN ++K C+ D A ++L EM IKP+
Sbjct: 352 MRQGDSGEAFRVKEEML-ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ ++ G+ KE+ V +L M++ + + I+ LC+ +A + +
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFE 470
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M+S G+KPN+V Y+ I G ++G F+EA + ++M G+ P+ Y +++ +CK
Sbjct: 471 IMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSR 530
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA----KELIG 380
E A + E I +G PN T +L+ G + ++ A KE++G
Sbjct: 531 KMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 6/332 (1%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+IL++ + P D L ++ I L ++ YL E+ R N +
Sbjct: 502 RILKVMDKKGVQP----DVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ + A R FKEM + + AL+ E +F
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF-RCMLGRS 616
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ TY+ +I + A +L+E K + P+ ++ ++++GF K+
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + M + G+ + YN I+ LCK + A+ L D + KG+ N+VTY+ I G+
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK GN +A + + M+ G+ P+S VY ++ K G+ E AL ES+ KG+
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAST- 795
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+++ +L+ G + KV EA +L+ + +K K
Sbjct: 796 SSLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 72/349 (20%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+AN E R + M E + H V + L+ A A + KE KR+ E + G P L
Sbjct: 213 KANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEK-GCSPSL 271
Query: 182 DTYNRVIKAFCESSDSSSA------------------YSILA-----------------E 206
TYN VI C + + A YSIL E
Sbjct: 272 VTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEE 331
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K +KP ++ AL+ GF ++ + +V + M G+K + YN + +CK
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGF------------------------------ 296
+A ALL+EM+ G+KP++ TY++ I G+
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 297 -----CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
C+ G+ E+A + + IM + G+ PN+ +Y T++ + G ++ A+ K KG
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAG 399
P+ S++ GL + K+ EAK+ L+ +++ NV T+ + G
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 10/296 (3%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIIL-YGQANMTE 127
H D +S I+ L G + L E + PD+ F +SII + +
Sbjct: 618 HPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV----FTYNSIISGFCKQGGIG 673
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + + M + + ++ +NAL+ L A + + + +F P G+ + TY +
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK-GLAHNAVTYATI 732
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I +C+S + S A+ + EM K + P++ + AL+ G KE E + + G
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
S S+ N + CK K EA LL++M+ K +KP+ VTY+ I CK G +EA++
Sbjct: 793 ASTSSL-NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQ 851
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
F+ M L PN+ Y ++ G E IAK P+ T ++
Sbjct: 852 FFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMI 907
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
TE A+ F E K S + NAL+ + E ++ + + +KPD TY
Sbjct: 777 TEKALSLFLE-SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKH-VKPDHVTYT 834
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C++ A +M ++++ PNA ++ AL++G+ + ++ + M
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
++ ++V I + K + L+D+ML KG + I C+ + E
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
K + GL+ + + T+V K G + A K + WVP+ T + L+
Sbjct: 955 LKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 3/172 (1%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ G+ K+ +++ +R G G+ N + L K K + ML
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + TY+H I + GN +E K+ M G SP+ Y ++ +C+ G+ +
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
A K KG V + T L+ G + +EAK ++ +E F+K +
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLML---EEMFSKGL 337
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 156 TIAKDY-------KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
TI DY KE ++ F++ K + P+ TY ++ + + S +++ EM
Sbjct: 834 TILIDYHCKTGFLKEAEQFFVDMQKR-NLMPNALTYTALLSGYNMAGRRSEMFALFDEMI 892
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
K I+P+ ++ ++ KE + K++ M + G ++ +V I LC+ +
Sbjct: 893 AKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVS 952
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E +L+++ +G+ + T S + F K G + A + + M P+S+ ++
Sbjct: 953 EVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Query: 329 YFMCKGGDYETALGFCKE 346
D E A F K+
Sbjct: 1013 NVEQDSTDSENAGDFLKQ 1030
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 8/330 (2%)
Query: 74 DRLAFSIAINKL-SEANYFNGISQYLEELKT--RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ IN + +E + Y E +++ PD+ + + + G NM AV
Sbjct: 162 DVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM---AV 218
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FK+M+++ + +V +N ++ +L + + E GI PD TYN ++
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR-GIPPDAITYNSIVHG 277
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + A + M++ KP+ ++ ++ YK+ D L M G+
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y +H LC L + EA L +M KG KP+ V Y+ I CKD +A +F
Sbjct: 338 VVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLS 397
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + G+ PN+ Y T+++ C G + A KE + + +PN T LV GL
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
VSEA+ + + EK + N+ T+N + G
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 7/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++I I+ L + N + +L E+ + PD+ H + GQ N A+
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN---EAI 358
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R FK+M++ + V A+N ++ +L + + E GI P+ TY+ ++
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR-GIPPNAVTYSTILHG 417
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + EM +++ PN +F LV G +E + V + M G++
Sbjct: 418 FCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN ++ C K EA+ + + M+ KG P+ +Y+ I G+C ++AK
Sbjct: 478 IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLT 537
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
MS L+PN+ Y T++ +C G A K+ + G +P T L+ GL
Sbjct: 538 QMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHG 597
Query: 371 KVSEAKELIGLVKEK 385
+ EA +L +KEK
Sbjct: 598 HLDEALKLFKSMKEK 612
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ A+ EM + +N+++ L E R+F + G KPD+ TY
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN-GCKPDVVTY 306
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I + + + A L+EM + I P+ ++ ++ G + + ++ + ME+
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K V YN I SLCK R +A L EM+ +G+ PN+VTYS ++GFC G +E
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + ++ M + PN+ + +V +C+ G A + KG PN T +L+
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 365 GLAGASKVSEAKELIGLVKEK 385
G K++EA+++ ++ K
Sbjct: 487 GYCLRCKMNEARKVFEIMVGK 507
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 5/307 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D +A++ I+ L + N ++L E+ R N +S IL+G N+ + A +
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAV--TYSTILHGFCNLGQLDEATQ 429
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
FKEM + + F+ L+ L E + VF E G++P++ TYN ++ +
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVF-ETMTEKGVEPNIYTYNALMNGY 488
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A + M K P+ S+ L+ G+ + + +L M +
Sbjct: 489 CLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNT 548
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + LC + + +A+ L +M S GM P +TYS + G CK G+ +EA K ++
Sbjct: 549 VTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKS 608
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M L P+ +Y ++ M GG E A G + A G P T ++ GL
Sbjct: 609 MKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGL 668
Query: 372 VSEAKEL 378
EA EL
Sbjct: 669 SDEAYEL 675
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 9/289 (3%)
Query: 116 SIILYGQ-----ANMTEHAVRTF--KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
SI+ +G+ A M +++ + +MD + H+V + N L+ L V+
Sbjct: 92 SIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVW 151
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ K GI+PD+ T+ +I C A + EM R +P+ S+ L+ G
Sbjct: 152 GKMFK-LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
V + ME+ G K V YN I SLCK R +A L EM+ +G+ P+++T
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ ++G C G EA + ++ M +G P+ Y ++ + K A F E +
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
+G P+ T +++ GL +++EA L +++K K +V +N I
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 194 SSDSSSAYSILA---EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
SS++ S LA M R + +P+ FG + K ++Y V + M+ +G+
Sbjct: 68 SSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHT 127
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V N+ I+ LC+L A ++ +M G++P+ +T++ I G C +G + A + Y
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M SG P+ Y T++ +C G+ A+ K+ G PN T +++ L
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V++A + + +V + T+N I GL
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGL 278
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ +F M R S+ F L ++ K Y V + + +G+ + + N
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQM-DLFGVTHTVYSLN 132
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A S+ +M + I+P+ +F L+ G E K
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK-------------- 178
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+K V +YN EM+ G +P+ ++Y+ I G C GN A
Sbjct: 179 -IKVAVELYN--------------------EMVRSGHEPDVISYNTLINGLCNSGNTNMA 217
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ M +G PN Y T++ +CK A+ F E + +G P+ T S+V G
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG 277
Query: 366 LAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
L +++EA L +++ K +V T+N I
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 104/272 (38%), Gaps = 40/272 (14%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +S ++ + +Q +E+ R + N SI++ G Q M A F
Sbjct: 409 VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL--TFSILVDGLCQEGMVSEARWVF 466
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD----------- 182
+ M E + ++ +NAL+ + E ++VF E G PDL
Sbjct: 467 ETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF-EIMVGKGCAPDLHSYNILINGYCN 525
Query: 183 ------------------------TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
TYN ++K C A + +M + P +
Sbjct: 526 SRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMT 585
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ L+ G K ++ K+ + M+ ++ + +Y + I + K AK L ++
Sbjct: 586 YSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ G++P TY+ I G K+G +EA + +R
Sbjct: 646 ADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 150/330 (45%), Gaps = 9/330 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVR 131
D +A++ + + + + ++ PD + +++I L G+ T +A+
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMPMEPD----SYTYNTLIRGLCGRGR-TGNALV 177
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+M V + LL A YK+ ++ E + G PD+ TYN V+
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RAKGCAPDIITYNVVVNGI 236
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A L + +PN S+ ++ G E++ED K++ M + G V
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+N+ I LC+ A +LD++ G PNS++Y+ ++ FCK + A F +
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G P+ Y T++ +C+GG+ + A+ + KG P + +++ GL A K
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + ++ T++ I +GL
Sbjct: 417 TKEALELLNEMVTKGLQPDIITYSTISSGL 446
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 9/326 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ RA P D + +++ +N + + + ++L+ L + N +++
Sbjct: 212 KLLDEMRAKGCAP----DIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNT--VSYN 265
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+L G A E A + EM + +V FN L+ L + V + PK
Sbjct: 266 IVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK- 324
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P+ +YN ++ AFC+ A + + M + P+ S+ L+ + + +
Sbjct: 325 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDA 384
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L ++ G + YN I L K K EA LL+EM++KG++P+ +TYS
Sbjct: 385 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISS 444
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C++ EEA + + + + G+ PN+ +Y ++ +CK + A+ I+ G +P
Sbjct: 445 GLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMP 504
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIG 380
N +T L+ GL V EA+EL+G
Sbjct: 505 NESTYTILIEGLTYEGLVKEARELLG 530
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 4/236 (1%)
Query: 169 IEFPKT---YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
IEF K+ +G +P+ +YN V+K C + A ++AEM +K PN +F L++
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISF 305
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ E +VL + +YG YN +H+ CK +K A A ++ M+S+G P+
Sbjct: 306 LCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPD 365
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
V+Y+ + C+ G + A + + + G +P Y T++ + K G + AL
Sbjct: 366 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
E + KG P+ T ++ +GL ++ EA V++ + N +N I GL
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 10/271 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R + M + + G AL+ L + E +RV +PD+ YN
Sbjct: 76 EEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLA------ACEPDVMAYNA 129
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C + +A ++A+M ++P++ ++ L+ G + + VL M R G
Sbjct: 130 MVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG 186
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V Y + + + CK +A LLDEM +KG P+ +TY+ + G C++G ++A
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI 246
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F + + + G PN+ Y ++ +C +E A E KG+ PN T L++ L
Sbjct: 247 EFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFL 306
Query: 367 AGASKVSEAKELIGLV-KEKFTKNVDTWNEI 396
V A E++ + K T N ++N I
Sbjct: 307 CRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 1/295 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I + L A + + + E+ + N I + + E A+ +
Sbjct: 262 VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ ++ + ++N +L A K F+E + G PD+ +YN ++ A C
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELMVSRGCYPDIVSYNTLLTALCRGG 380
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A +L ++ K P S+ ++ G K K ++ ++L M G++ + Y+
Sbjct: 381 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYS 440
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
LC+ + EA ++ G++PN+V Y+ + G CK A + M ++
Sbjct: 441 TISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISN 500
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
G PN S Y ++ + G + A E ++G V K+ + L G +
Sbjct: 501 GCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLLDGTT 555
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 3/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK-DYKEVKRVFIEFPKTYGIK 178
Y + + + A+ H V ++NA+L A +K + + VF E ++ +
Sbjct: 144 YSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQ-VS 202
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN +I+ FC + + A M++K PN ++ L+ G+ K K +D ++
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ M G++ + YNV I+ LC+ + E +L EM +G + VTY+ I G+CK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+GNF +A + M GLSP+ Y ++++ MCK G+ A F + +G PN T
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+LV G + ++EA ++ ++ F+ +V T+N + G
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALING 424
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 149/321 (46%), Gaps = 4/321 (1%)
Query: 60 EICRAAALTP-ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII 118
E+ R+ AL E +L +++++ IN L IS L E+ R +E + I
Sbjct: 261 ELLRSMALKGLEPNL--ISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIK 318
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
Y + A+ EM H L SV + +L+ ++ A + F++ + G+
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE-FLDQMRVRGLC 377
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TY ++ F + + AY +L EM P+ ++ AL+ G K D V
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAV 437
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ M+ G+ V Y+ + C+ EA + +M++KG+KP+++TYS I GFC+
Sbjct: 438 LEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCE 497
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+EA + M GL P+ Y ++ C GD + A+ E + KG +P+ T
Sbjct: 498 QRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVT 557
Query: 359 MKSLVTGLAGASKVSEAKELI 379
L+ GL ++ EAK L+
Sbjct: 558 YSVLINGLNKQARTREAKRLL 578
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A FKEM + ++ +V +N L+ +A + R F K G P++ TYN +I
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKK-GCLPNVVTYNTLI 247
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + +L M K ++PN S+ ++ G +E + ++++ VL M + G
Sbjct: 248 DGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYS 307
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN I CK +A + EML G+ P+ +TY+ I+ CK GN A +F
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL PN Y T+V + G A KE I G+ P+ T +L+ G
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
A K+ +A ++ +KEK T +V +++ + +G
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 51/357 (14%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ I+ + +A N +++L++++ R NER + + + Q A R KE
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ SV +NAL+ IA + V +E K G+ PD+ +Y+ V+ FC S
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAV-LEDMKEKGLTPDVVSYSTVLSGFCRSY 464
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
D A + +M K IKP+ ++ +L+ GF ++ + ++ + M R G+ Y
Sbjct: 465 DVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYT 524
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS------------------------- 290
I++ C +A L +EM+ KG+ P+ VTYS
Sbjct: 525 ALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYE 584
Query: 291 -------------------------HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
I GFC G EA + + M P+ + Y
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYN 644
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
M++ C+GGD A KE + G++ + T+ +LV L KV+E +I V
Sbjct: 645 VMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANV 701
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 6/290 (2%)
Query: 91 FNGIS---QYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSV 145
NG+ + L+ L + E + I+ G M TE A+ +M+E ++ V
Sbjct: 17 MNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHV 76
Query: 146 GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
+NA++ L + + +F E GI PD+ TY+ +I +FC S + A +L
Sbjct: 77 VIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+M + I P+ +F AL+ KE K + ++ M R G+ YN I CK
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ +AK +LD M SK P+ VT+S I G+CK + + + M G+ N+ Y
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
T+++ C+ GD + A I+ G PN+ T +S++ L ++ +A
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
IK + YN +I C+ A ++ EM K I P+ ++ ++ F + ++ D
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ M + V ++ I++L K K +EA+ + +ML +G+ P ++TY+ I GF
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK +AK+ M++ SP+ + T++ CK + + E +G V N
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G + A++L+ ++ N T+ + A L
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T+ ++ C A +++ M + +P +G ++ G K E
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +K+ V +YN I LCK A+ L EM KG+ P+ +TYS I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G + +A++ R M ++P+ + ++ + K G A + + +G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T S++ G ++++AK ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRML 204
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D+ SA ++L++M+ IK + + A++ K+ + + M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ V Y+ I S C+ + +A+ LL +M+ + + P+ VT+S I K+G
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA++ Y M G+ P + Y +M+ CK A +K P+ T +L+
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
G A +V E+ + + N T+ + G Q
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M E ++ V F+AL+ AL E + ++ + + GI P TYN +I
Sbjct: 130 AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR-GIFPTTITYNSMI 188
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ + A +L M KS P+ +F L+ G+ K ++ ++ ++ M R G+
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y IH C++ A+ LL+ M+S G+ PN +T+ + C +A
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 309 YRIMSNSGLSP 319
+ S + P
Sbjct: 309 LEDLQKSEVCP 319
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP----------------- 284
M G + V + ++ LC + +A AL+D M+ +G +P
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 285 --------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ V Y+ I CKDG+ A+ + M + G+ P+ Y M+
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKN 389
C+ G + A ++ I + P+ T +L+ L KVSEA+E+ G +++
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 390 VDTWNEIEAG 399
T+N + G
Sbjct: 181 TITYNSMIDG 190
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/217 (17%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ + + Q L ++ R PD+ ++++ G+ + E
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE--- 166
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M + + +N+++ + KR+ ++ + PD+ T++ +I
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM-LDSMASKSCSPDVVTFSTLING 225
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ + I EM R+ I N ++ L+ GF + + +L +M G+
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ + SLC ++ +A A+L+++ + P V
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 170/391 (43%), Gaps = 38/391 (9%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
LT LK +PE+ L + H D ++S I KL+++ F+ + Q L ++ R
Sbjct: 53 LTDLKEIEDPEEALSLFHQYQEMGFRH-DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEM----------------------------- 136
E I YG+A + AV F ++
Sbjct: 112 VRCRESLFMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 137 ------DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +LR + +FN L+ D++ +VF E + ++P + TYN +I
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME-VQPSVVTYNSLIGF 230
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C ++D A S+L +M +K I+PNA +FG L+ G +Y + K++ ME G K G
Sbjct: 231 LCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPG 290
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ Y V + L K K EAK LL EM + +KP+ V Y+ + C +G EA +
Sbjct: 291 LVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLT 350
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G PN++ Y +V C+ GD+++ L +A P T +V+GL
Sbjct: 351 EMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGG 410
Query: 371 KVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
+ A ++ ++ K+K + W + L
Sbjct: 411 NLDHACFVLEVMGKKKLSFGYSAWQNLLCDL 441
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 1/260 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L+ + N TE A + EM +++ SV FN ++ L K+ K F+ +T G+K
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKD-FVGHMETSGVK 253
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN ++ +C S +A +IL M R+ I+P++ ++G+L++G K+ + E+ +K+
Sbjct: 254 PNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + G++ +YN I C A A DEML KG+ P TY+ I+
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM 373
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ +EA+ + + G+SP++ Y ++ C+ + + A E +A G P T
Sbjct: 374 EQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKT 433
Query: 359 MKSLVTGLAGASKVSEAKEL 378
SL+ L+ +++ EA +L
Sbjct: 434 YTSLLHVLSKKNRMKEADDL 453
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ P ++T N ++ F + + + +A+ + AEM R IK + +F ++ KE K
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + ME G+K + YN +H C + A A+L M + ++P+S TY
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK G EEA K + M GL P++ +Y T++ C G+ + A + E + KG
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
P +T SL+ L + EA+ +I ++EK + + T+N + G
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 142/318 (44%), Gaps = 13/318 (4%)
Query: 77 AFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
F+I IN KL +A F G ++E +P++ H Y + E A
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVG---HMETSGVKPNIVTYNTIVHG---YCSSGRVEAAD 276
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M K+ + +L+ + +E ++F E + G++P YN +I
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVIYNTLIDG 335
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC + A + EM +K I P S++ +L+ + E++ ++ +++ ++ G+
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I+ C+ +A L DEML+ G+KP TY+ ++ K +EA ++
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+++ G+ P++ ++ ++ C + + A K+ P+ T +++ G
Sbjct: 456 KITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515
Query: 371 KVSEAKELIGLVKEKFTK 388
KV EA+EL +K + K
Sbjct: 516 KVEEARELFDEMKRRGIK 533
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + + ++ +N+L+ AL + + E + + E + GI PD TYN +I +C
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI-QEKGISPDAITYNILINGYCRC 409
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+++ A+ + EM IKP ++ +L+ K+ + ++ + + + + G+ M+
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMF 469
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I C A LL +M + P+ VT++ + G C++G EEA++ + M
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ + T++ + GD + A E + G+ P T +LV GL +
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDL 589
Query: 375 AKELIG-LVKEKFTKNVDTWNEIEAGL 400
A+EL+ +V + T + T+ + G+
Sbjct: 590 AEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
++ +IK+ C+ + + A+ M K + P + +L++ F K + E + M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
R +KS V +N+ I+ LCK K +AK + M + G+KPN VTY+ ++G+C G
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A M + P+S Y +++ MCK G E A +E + KG P+ +L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ G + A ++K+ + + T+N +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+R G KS + +++ I S C + + EA M KG+ P T + + F K
Sbjct: 144 DRLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A Y M + + + M+ +CK G + A F G PN T ++
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262
Query: 363 VTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
V G + +V A ++ +K +K + T+ + +G+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L+ + N TE A + EM +++ SV FN ++ L K+ K F+ +T G+K
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKD-FVGHMETSGVK 253
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN ++ +C S +A +IL M R+ I+P++ ++G+L++G K+ + E+ +K+
Sbjct: 254 PNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + G++ +YN I C A A DEML KG+ P TY+ I+
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM 373
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ +EA+ + + G+SP++ Y ++ C+ + + A E +A G P T
Sbjct: 374 EQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKT 433
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
SL+ L+ +++ EA +L + E +V +N + G
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG 475
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ P ++T N ++ F + + + +A+ + AEM R IK + +F ++ KE K
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + ME G+K + YN +H C + A A+L M + ++P+S TY
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK G EEA K + M GL P++ +Y T++ C G+ + A + E + KG
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
P +T SL+ L + EA+ +I ++EK + + T+N + G
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 141/318 (44%), Gaps = 13/318 (4%)
Query: 77 AFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
F+I IN KL +A F G ++E +P++ H Y + E A
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVG---HMETSGVKPNIVTYNTIVHG---YCSSGRVEAAD 276
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M K+ + +L+ + +E ++F E + G++P YN +I
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVIYNTLIDG 335
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC + A + EM +K I P S++ +L+ + E++ ++ +++ ++ G+
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I+ C+ +A L DEML+ G+KP TY+ ++ K +EA ++
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+++ G+ P+ ++ ++ C + + A K+ P+ T +++ G
Sbjct: 456 KITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515
Query: 371 KVSEAKELIGLVKEKFTK 388
KV EA+EL +K + K
Sbjct: 516 KVEEARELFDEMKRRGIK 533
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + + ++ +N+L+ AL + + E + + E + GI PD TYN +I +C
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI-QEKGISPDAITYNILINGYCRC 409
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+++ A+ + EM IKP ++ +L+ K+ + ++ + + + + G+ V M+
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMF 469
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I C A LL +M + P+ VT++ + G C++G EEA++ + M
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ + T++ + GD + A E + G+ P T +LV GL +
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDL 589
Query: 375 AKELIG-LVKEKFTKNVDTWNEIEAGL 400
A+EL+ +V + T + T+ + G+
Sbjct: 590 AEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
++ +IK+ C+ + + A+ M K + P + +L++ F K + E + M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
R +KS V +N+ I+ LCK K +AK + M + G+KPN VTY+ ++G+C G
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A M + P+S Y +++ MCK G E A +E + KG P+ +L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ G + A ++K+ + + T+N +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+R G KS + +++ I S C + + EA M KG+ P T + + F K
Sbjct: 144 DRLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A Y M + + + M+ +CK G + A F G PN T ++
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262
Query: 363 VTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
V G + +V A ++ +K +K + T+ + +G+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 6/290 (2%)
Query: 91 FNGI---SQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSV 145
NG+ + L+ L + E + I+ G M TE A+ +M+E ++ V
Sbjct: 17 MNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHV 76
Query: 146 GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
+NA++ L + + +F E GI PD+ TY+ +I +FC S + A +L
Sbjct: 77 VIYNAIIDRLCKDGHHIHAQNLFTEMHDK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+M + I P+ +F AL+ KE K + ++ M R G+ YN I CK
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ +AK +LD M SK P+ VT+S I G+CK + + + M G+ N+ Y
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
T+++ C+ GD + A I+ G PN+ T +S++ L ++ +A
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
IK + YN +I C+ A ++ EM K I P+ ++ ++ F + ++ D
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ M + V ++ I++L K K +EA+ + +ML +G+ P ++TY+ I GF
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK +AK+ M++ SP+ + T++ CK + + E +G V N
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G + A++L+ ++ N T+ + A L
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T+ ++ C A +++ M + +P +G ++ G K E
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +K+ V +YN I LCK A+ L EM KG+ P+ +TYS I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G + +A++ R M ++P+ + ++ + K G A + + +G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T S++ G ++++AK ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRML 204
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D+ SA ++L++M+ IK + + A++ K+ + + M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ V Y+ I S C+ + +A+ LL +M+ + + P+ VT+S I K+G
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA++ Y M G+ P + Y +M+ CK A +K P+ T +L+
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
G A +V E+ + + N T+ + G Q
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP----------------- 284
M G + V + ++ LC + +A AL+D M+ +G +P
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 285 --------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ V Y+ I CKDG+ A+ + M + G+ P+ Y M+
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKN 389
C+ G + A ++ I + P+ T +L+ L KVSEA+E+ G +++
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 390 VDTWNEIEAG 399
T+N + G
Sbjct: 181 TITYNSMIDG 190
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/207 (17%), Positives = 90/207 (43%), Gaps = 7/207 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ + + Q L ++ R PD+ ++++ G+ + E
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE--- 166
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M + + +N+++ + KR+ ++ + PD+ T++ +I
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM-LDSMASKSCSPDVVTFSTLING 225
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ + I EM R+ I N ++ L+ GF + + +L +M G+
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEM 277
+ + SLC ++ +A A+L+++
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDL 312
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 180/393 (45%), Gaps = 41/393 (10%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
++K + NP K LEI + L + I KL F + + L E TR ++
Sbjct: 13 VVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAE--TRMNI 70
Query: 108 QN---ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
N E + ++ YG+ + AV F+ MD SV ++NA++ L + + +
Sbjct: 71 DNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQA 130
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+V++ + GI PD+ T+ +K+FC +S +A +L M + + +A ++ ++
Sbjct: 131 HKVYMRM-RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIG 189
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
GFY+E + +++ + M G+ + +N IH+LC+ E++ LL+++L +G+ P
Sbjct: 190 GFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP 249
Query: 285 NSVTYSHFIYGFCK-----------DG---------------------NFE--EAKKFYR 310
N T + FI GFC+ DG NF+ EA+ + R
Sbjct: 250 NLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLR 309
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G P+ Y +++ CK G + A ++ KG+VP+ +T SL+ GL
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
+ A + EK K N+ N + GL Q
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQ 402
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C+ D A ++ E K +KPN LV G ++
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQA 409
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K++ M G + YN+ I+ LCK+ ++A L+ + ++KG P+ T++ I G
Sbjct: 410 LKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDG 469
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M N G+SP+ Y +++ +CK G YE +G K + KG VPN
Sbjct: 470 YCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPN 529
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T L A KV EA LI ++ K T +V + + G
Sbjct: 530 IITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 72/335 (21%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + A+ F E E L+ ++ N L+ L+ + ++ E + G PD+
Sbjct: 367 QDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN-GCSPDI 425
Query: 182 DTYNRVIKAFCE---SSDS--------------------------------SSAYSILAE 206
TYN VI C+ SD+ +A I+
Sbjct: 426 WTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDR 485
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + P+ ++ +++ G K KYEDV ++M G + YN+ S CK RK
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG-------------------------- 300
EA L++EM +KG+ P+ V + + GFC +G
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605
Query: 301 ----------NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
N A+K + M +G SP+S Y M+ CK G+ + F I K
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G +P+ TT ++ L +V EA +I L+ K
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A+ M H + V +N++L L A Y++V F + G P++ TYN
Sbjct: 477 DNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTF-KLMMEKGCVPNIITYNI 535
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM-ERY 245
+ ++FC++ A +++ EM K + P+ +FG L+ GF + ++ + + E+Y
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
++ YN+ I++ A+ L ++M G P+S TY I GFCK GN
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSG 655
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
F + GL P+ + + ++ +C A+G + KG VP
Sbjct: 656 YSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN +I C++ A L +M + +P+ ++ +++ G+ K ++
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++L+ G S Y I+ LC+ A + +E + KG+KPN V + + G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G +A K MS +G SP+ Y ++ +CK G A ++IAKG +P+
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G K+ A E++ + + +V T+N I GL
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGL 505
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 68/168 (40%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E A+ +EM L V F L+ D ++F + Y
Sbjct: 540 FCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSH 599
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +I AF + + A + +M P++ ++ ++ GF K L
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ G+ ++ + ++ LC R+ EA ++ M+ KG+ P V
Sbjct: 660 LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + ++E+ R D +++I Y N + E
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + + + EV + +YG+KP++ YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L+EM +K + +F LV F + + V ++L+ M +G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M S G KPN+V+Y+ + G C G + +A++ M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G PN + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I L
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACAL 541
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 138/310 (44%), Gaps = 3/310 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I L F + + L ++ + R +A I + E A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + L+ +V +N +L L A+ +KE + + E F K + D T+N ++ FC++
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQN 369
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+L +M P+ ++ ++ GF KE ++ +L+ M G K Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + LC + +A+ L+ +M+ +G PN VT++ I CK G E+A + + M
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+G SP+ Y T++ + K G E AL + KG PN S+ L+ +V++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 375 AKELIGLVKE 384
++ +K+
Sbjct: 550 VIQMFDNIKD 559
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
++VR + M G N +L A+ E + + +G + D+ +YN V
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAV 222
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + ++ EM R PN +F L+ + +E V++VL M +G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ MY I +CK A +L+ M S G+KPN V Y+ + G C ++EA++
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M + + +V F C+ G + + ++ ++ G +P+ T +++ G
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 368 GASKVSEAKELI 379
+ EA L+
Sbjct: 403 KEGLIDEAVMLL 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q + + + ++M H V + ++ E + ++ + G KP
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV-MLLKSMSSCGCKP 424
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +Y V+K C + A ++++M ++ PN +F L+ K+ E ++L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G + Y+ I L K K EA LL+ M++KG+ PN++ YS ++
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + + + + ++ + ++ +Y ++ +CK + + A+ F ++ G +PN +T
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 360 KSLVTGLAGASKVSEAKELI 379
L+ GLA EA+EL+
Sbjct: 605 TMLIKGLASEGLAKEAQELL 624
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P Y+ +++A C S ++ +L M K + + ++ ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ + +G ++ + YN + LC ++ + + L+DEM+ PN VT++ I
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G FE + MS G +P+ +Y T++ +CK G E A + G PN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++ GL A + EA+EL+ E F K+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELL---SEMFQKD 351
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ + + + + I + + + + A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF--------PKTY------ 175
V K M + + ++ +L L A + + + + + P T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 176 --------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
G PDL +Y+ VI ++ + A +L M K I PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ ++ +E + VNKV+QM + ++S +YN I SLCK + A
Sbjct: 531 TIIYSSIACALSREGR---VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
M+S G PN TY+ I G +G +EA++ + + G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 95/225 (42%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ T+ V++ C + A +L EM K P + ++ + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+VL+ M G N+ ++++C+ EA LL ++ G + + V+Y+ + G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C + + ++ M +PN + T++ ++C+ G +E + G P+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+++ G+ + A E++ + K NV +N + GL
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
FS+ I++L AN+F + L +K E YG+ + AVR F++M
Sbjct: 53 FSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMK 112
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E++ S ++ + A+ + ++ ++ F + + GI P + + N +IKA C++S +
Sbjct: 113 EYECEPSQKSY-ITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171
Query: 198 -SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+A I EM + P++ ++G L+ G + K + ++ + ME V Y
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
IH LC+ + A LL+EM SKG+KPN TYS + G CK G A + +M +
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
PN Y T+V+ +CK G + A+ +G P+ +++G K EA
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351
Query: 377 ELIG-LVKEKFTKNVDTWN 394
+ +V + N TW+
Sbjct: 352 NFLDEMVLGGISPNRLTWS 370
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FKEM+ +V + +L+ L +KD R+ E + GIKP++ TY+ ++ C
Sbjct: 214 FKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEM-ASKGIKPNVFTYSSLMDGHC 272
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S SS A +L M + PN ++ LV G KE K ++ ++L M+ G++
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH-------FIYGFCKDGNFEEA 305
+Y I C + K EA LDEM+ G+ PN +T+S + G C + + A
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRA 391
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ Y M G+S ++ + ++V + C GD A E + G +P+ T ++V
Sbjct: 392 FQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCA 451
Query: 366 LAGASKVSEAKELI 379
KV E+ EL+
Sbjct: 452 FWDRRKVRESAELV 465
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG-------ALVAG 225
K G++PD Y ++I FC+ A + L EM I PN ++ +V G
Sbjct: 323 KLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQG 382
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
E L M R G+ ++ ++ C +A L+DEM+ G P+
Sbjct: 383 LCTEHPNRAFQLYLSMRTR-GISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPD 441
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRI 311
VT++ + F E+ + ++
Sbjct: 442 EVTWNAVVCAFWDRRKVRESAELVQV 467
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
FS+ I++L AN+F + L +K E YG+ + AVR F++M
Sbjct: 53 FSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMK 112
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E++ S ++ + A+ + ++ ++ F + + GI P + + N +IKA C++S +
Sbjct: 113 EYECEPSQKSY-ITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171
Query: 198 -SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+A I EM + P++ ++G L+ G + K + ++ + ME V Y
Sbjct: 172 MDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXS 231
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
IH LC+ + A LL+EM SKG+KPN TYS + G CK G A + +M +
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
PN Y T+V+ +CK G + A+ +G P+ +++G K EA
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351
Query: 377 ELIG-LVKEKFTKNVDTWN 394
+ +V + N TW+
Sbjct: 352 NFLDEMVLGGISPNRLTWS 370
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FKEM+ +V + +L+ L +KD R+ E + GIKP++ TY+ ++ C
Sbjct: 214 FKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMA-SKGIKPNVFTYSSLMDGHC 272
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S SS A +L M + PN ++ LV G KE K ++ ++L M+ G++
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH-------FIYGFCKDGNFEEA 305
+Y I C + K EA LDEM+ G+ PN +T+S + G C + + A
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRA 391
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ Y M G+S ++ + ++V + C GD A E + G +P+ T ++V
Sbjct: 392 FQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCA 451
Query: 366 LAGASKVSEAKELI 379
KV E+ EL+
Sbjct: 452 FWDRRKVRESAELV 465
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 8/146 (5%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG-------ALVAG 225
K G++PD Y ++I FC+ A + L EM I PN ++ +V G
Sbjct: 323 KLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQG 382
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
E L M R G+ ++ ++ C +A L+DEM+ G P+
Sbjct: 383 LCTEHPNRAFQLYLSMRTR-GISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPD 441
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRI 311
T++ + F E+ + ++
Sbjct: 442 EXTWNAVVCAFWDRRKVRESAELVQV 467
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 11/317 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE--H 128
D+ F++ +N LS+ + + ++ + PD+ + ++ ++ G + E
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI-----YTYNSLISGLCKLGEVDE 354
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV+ +M E + +N ++ L +E ++ + GI PD+ TYN +I
Sbjct: 355 AVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK-GILPDVCTYNSLI 413
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C S + + A + EM K P+ ++ L+ K ++ +L+ ME G
Sbjct: 414 QGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCA 473
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I CK ++ AEA+ + D+M +G+ NSVTY+ I G CK EEA +
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL P+ Y +++ + CK GD + A + + G P+ T +L+ GL
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593
Query: 369 ASKVSEAKELIGLVKEK 385
A +V A +L+ ++ K
Sbjct: 594 AGRVEAATKLLRTIQMK 610
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N E A + + + V +N+L+ L +++++ ++ E KT G PD T
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM-KTKGCHPDEFT 443
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I + C A ++L EM+ N ++ L+ GF K ++ + ++ ME
Sbjct: 444 YNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQME 503
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ YN I LCK + EA L+D+M+ +G++P+ TY+ + FCK G+ +
Sbjct: 504 LQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIK 563
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+A + M++ G P+ Y T++ +CK G E A + KG
Sbjct: 564 KAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG 611
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 174/392 (44%), Gaps = 12/392 (3%)
Query: 14 FSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHL 73
F+ +H L T++ T L+ L L+ E + ++ + A+ P
Sbjct: 32 FATTNHEPLTTTT----NSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKP 87
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
F ++KL +A F+ + L+E+K + + I Y + ++
Sbjct: 88 SSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFV 147
Query: 134 KEMD-EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK--TYGIKPDLDTYNRVIKA 190
M+ E + + +N LL L D ++K V I + GI+PD+ T+N +IKA
Sbjct: 148 DAMEVEFGVVANTHFYNFLLNVLV---DGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + A ++ EM+ + P+ +F ++ GF +E + +V + M G
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVT 264
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
NV ++ CK + EA ++EM L +G P+ T++ + G K G+ + A +
Sbjct: 265 NVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM 324
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+M G P+ Y +++ +CK G+ + A+ + I + PN T ++++ L
Sbjct: 325 DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKE 384
Query: 370 SKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
++V EA +L + L + +V T+N + GL
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +KEM +N L+ +L +E + E + G ++ TYN +I
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM-EVSGCARNVITYNTLI 483
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ + A I +M+ + + N+ ++ L+ G K E+ E+ ++++ M G++
Sbjct: 484 DGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR 543
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + CK +A ++ M S G +P+ VTY I G CK G E A K
Sbjct: 544 PDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKL 603
Query: 309 YRIMSNSGL-----------------------------------SPNSSVYFTMVYFMCK 333
R + G+ +P++ Y + +C+
Sbjct: 604 LRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663
Query: 334 GGD-YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
GG A+ F E + +G+VP F++ L GL + V +LI +V EK
Sbjct: 664 GGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEK 716
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 182/405 (44%), Gaps = 46/405 (11%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGI 94
PL K T T+++ + +P K LE+ + + I KL F +
Sbjct: 4 PLLPKHVT----TVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAM 59
Query: 95 SQYLEELKTRPDLQN---ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+ L ++ R ++ N E + ++ YG+ + AV F+ MD + +V ++NA+
Sbjct: 60 EEVLVDM--RQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ L + + + +V++ + GI PD+ ++ +K+FC +S +A +L M +
Sbjct: 118 MSILVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQG 176
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
+ N ++ +V GFY+E ++ ++ M G+ +S +N +H LCK E +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECE 236
Query: 272 ALLDEMLSKGMKPNSVTYSHFI-----------------------------------YGF 296
LLD+++ +G+ PN TY+ FI YG
Sbjct: 237 KLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGL 296
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+ F+EA+ + + N GL P+S Y T++ CKGG + A ++ G+VP+
Sbjct: 297 CKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDE 356
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T +SL+ GL + + A L K K NV +N + GL
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 14/316 (4%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHL--DRLAFSIAINKLSEANYF---NGISQYLEEL 101
TL+K SN ILE + A+ E L + F+I +N L + +G+ + +
Sbjct: 396 TLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 102 KTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
PD+ +I+++G + E+A+ M ++ + V +N+LL L
Sbjct: 456 GYFPDI-----FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTS 510
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
Y++V + + G P+L T+N ++++ C A +L EM KS+ P+A +F
Sbjct: 511 KYEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTF 569
Query: 220 GALVAGFYKEEKYEDVNKVLQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
G L+ GF K + + + ME Y + YN+ IH+ + A+ L EM+
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + P+ TY + GFCK GN + KF M +G P+ + ++ +C
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 339 TALGFCKESIAKGWVP 354
A G + KG VP
Sbjct: 690 EAAGIIHRMVQKGLVP 705
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 137/321 (42%), Gaps = 56/321 (17%)
Query: 116 SIILY-----GQAN--MTEHAVRTFKEMDEHKLRHSVGAFNAL---LLALTIAKDYKEVK 165
++ILY G +N + A + EM E L V FN L L + D +
Sbjct: 390 NVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+V I + G PD+ T+N +I + +A IL M + P+ ++ +L+ G
Sbjct: 450 KVMI----SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K KYEDV + + M G + +N+ + SLC+ K +A LL+EM +K + P+
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565
Query: 286 SVTYSHFIYGFCKDG------------------------------------NFEEAKKFY 309
+VT+ I GFCK+G N A+K +
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ M + L P+ Y MV CK G+ + F E + G++P+ TT+ ++ L
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 370 SKVSEAKELI------GLVKE 384
+V EA +I GLV E
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPE 706
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 117/229 (51%), Gaps = 7/229 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ L T+N+++ C+ D +L ++ ++ + PN ++ + G ++ + +
Sbjct: 211 GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAA 270
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ + G K V YN I+ LCK K EA+ L +++++G++P+S TY+ I G
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330
Query: 296 FCKDGNFEEAKKFYRIMSNS---GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+CK G + A+ RI+ N+ G P+ Y +++ +C G+ AL E++ KG
Sbjct: 331 YCKGGMVQLAE---RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
PN +L+ GL+ + EA +L + EK V T+N + GL
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGL 436
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 154/374 (41%), Gaps = 41/374 (10%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R +TP+ + +F+I + + + + L + ++ N + + + +
Sbjct: 138 RDRGITPDVY----SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N + F +M + + FN LL L D KE +++ + K G+ P+L
Sbjct: 194 ENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR-GVLPNLF 252
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN I+ C+ + +A ++ + + KP+ ++ L+ G K K+++ L +
Sbjct: 253 TYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312
Query: 243 ERYGMKSGVSMYNVRIHSLCK--LRKCAE------------------------------- 269
G++ YN I CK + + AE
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGET 372
Query: 270 --AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A AL +E L KG+KPN + Y+ I G G EA + MS GL P + +
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-F 386
V +CK G A G K I+KG+ P+ T L+ G + K+ A E++ ++ +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV 492
Query: 387 TKNVDTWNEIEAGL 400
+V T+N + GL
Sbjct: 493 DPDVYTYNSLLNGL 506
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C +++ A ++ E K IKPN + L+ G + +
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ V +N+ ++ LCK+ ++A L+ M+SKG P+ T++ I+G
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ E A + +M ++G+ P+ Y +++ +CK YE + K + KG PN
Sbjct: 471 YSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPN 530
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
T L+ L K+ +A +GL++E K+V+
Sbjct: 531 LFTFNILLESLCRYHKLDKA---LGLLEEMKNKSVN 563
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIKP++ YN +IK A + +EM K + P +F LV G K D
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ++++M G + +N+ IH K A +LD M+ G+ P+ TY+ + G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK +E+ + Y+ M G +PN + ++ +C+ + ALG +E K P+
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
T +L+ G + A L ++E + + T
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +EM + F L+ D +F + + Y + TYN
Sbjct: 548 DKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNI 607
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMMERY 245
+I AF E + + A + EM + + P+ ++ +V GF K + K +L+MME
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ S ++ V I+ LC + EA ++ M+ KG+ P +V
Sbjct: 668 FIPSLTTLGRV-INCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + ++E+ R D +++I Y N + E
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + + + EV + +YG+KP++ YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L+EM +K + +F LV F + + V ++L+ M +G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M S G KPN+V+Y+ + G C G + +A++ M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G PN + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I L
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACAL 541
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 138/310 (44%), Gaps = 3/310 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I L F + + L ++ + R +A I + E A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + L+ +V +N +L L A+ +KE + + E F K + D T+N ++ FC++
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQN 369
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+L +M P+ ++ ++ GF KE ++ +L+ M G K Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + LC + +A+ L+ +M+ +G PN VT++ I CK G E+A + + M
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+G SP+ Y T++ + K G E AL + KG PN S+ L+ +V++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 375 AKELIGLVKE 384
++ +K+
Sbjct: 550 VIQMFDNIKD 559
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
++VR + M G N +L A+ E + + +G + D+ +YN V
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAV 222
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + ++ EM R PN +F L+ + +E V++VL M +G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ MY I +CK A +L+ M S G+KPN V Y+ + G C ++EA++
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M + + +V F C+ G + + ++ ++ G +P+ T +++ G
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 368 GASKVSEAKELI 379
+ EA L+
Sbjct: 403 KEGLIDEAVMLL 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q + + + ++M H V + ++ E + ++ + G KP
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV-MLLKSMSSCGCKP 424
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +Y V+K C + A ++++M ++ PN +F L+ K+ E ++L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G + Y+ I L K K EA LL+ M++KG+ PN++ YS ++
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + + + + ++ + ++ +Y ++ +CK + + A+ F ++ G +PN +T
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 360 KSLVTGLAGASKVSEAKELI 379
L+ GLA EA+EL+
Sbjct: 605 TMLIKGLASEGLAKEAQELL 624
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P Y+ +++A C S ++ +L M K + + ++ ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ + +G ++ + YN + LC ++ + + L+DEM+ PN VT++ I
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G FE + MS G +P+ +Y T++ +CK G E A + G PN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++ GL A + EA+EL+ E F K+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELL---SEMFQKD 351
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ + + + + I + + + + A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF--------PKTY------ 175
V K M + + ++ +L L A + + + + + P T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 176 --------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
G PDL +Y+ VI ++ + A +L M K I PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ ++ +E + VNKV+QM + ++S +YN I SLCK + A
Sbjct: 531 TIIYSSIACALSREGR---VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
M+S G PN TY+ I G +G +EA++ + + G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 107/257 (41%), Gaps = 5/257 (1%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V A+NA++ A +R+ P + P+ T+ V++ C + A +L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
EM K P + ++ + + + +VL+ M G N+ ++++C+
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA LL ++ G + + V+Y+ + G C + + ++ M +PN +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
T++ ++C+ G +E + G P+ +++ G+ + A E++ +
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 385 KFTK-NVDTWNEIEAGL 400
K NV +N + GL
Sbjct: 315 YGLKPNVVCYNTVLKGL 331
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A++ F +M ++ + N LL +VKR F + G +P + TY
Sbjct: 75 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTY 133
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ D +A + EM + + P+ ++ +++ GF K + +D + M+
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ V YN I+ CK K EM G+KPN V+YS + FCK+G ++
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A KFY M GL PN Y +++ CK G+ A E + G N T +L+
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313
Query: 365 GLAGASKVSEAKELIG 380
GL A ++ EA+EL G
Sbjct: 314 GLCDAERMKEAEELFG 329
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 11/264 (4%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPD 180
E A F+EM L +N+++ + +V R+ F E K +PD
Sbjct: 146 VEAARGLFEEMKFRGLVPDTVTYNSMI------DGFGKVGRLDDTVCFFEEMKDMCCEPD 199
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN +I FC+ EM +KPN S+ LV F KE + K
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 259
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M R G+ Y I + CK+ ++A L +EML G++ N VTY+ I G C
Sbjct: 260 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 319
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA++ + M +G+ PN + Y +++ K + + AL E +G P+
Sbjct: 320 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 379
Query: 361 SLVTGLAGASKVSEAKELIGLVKE 384
+ + GL K+ AK ++ +KE
Sbjct: 380 TFIWGLCSLEKIEAAKVVMNEMKE 403
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 7/316 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ + + + EE+K PD+ + +G+ + +
Sbjct: 164 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI---GL 220
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++EM + L+ +V +++ L+ A ++ + +++ + G+ P+ TY +I A
Sbjct: 221 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDA 279
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + S A+ + EM + ++ N ++ AL+ G E+ ++ ++ M+ G+
Sbjct: 280 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 339
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
++ YN IH K + A LL+E+ +G+KP+ + Y FI+G C E AK
Sbjct: 340 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 399
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+ NS +Y T++ K G+ L E T L+ GL
Sbjct: 400 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 459
Query: 371 KVSEAKELIGLVKEKF 386
VS+A + + F
Sbjct: 460 LVSKAVDYFNRISNDF 475
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R EM + + +V + AL+ L A+ KE + +F + T G+ P+L +YN +I
Sbjct: 289 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALI 347
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ + A +L E+ + IKP+ +G + G EK E V+ M+ G+K
Sbjct: 348 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 407
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEM------------------------LSK---- 280
+ +Y + + K E LLDEM +SK
Sbjct: 408 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 467
Query: 281 --------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
G++ N+ ++ I G CKD E A + M GL P+ + Y +++
Sbjct: 468 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 527
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK----ELIG 380
K G+ AL + G + SLV GL+ +++ +A+ E+IG
Sbjct: 528 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 579
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P ++ + + A ++M R + P S L+ F K K +DV +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G + V YN+ I +CK A+ L +EM +G+ P++VTY+ I GF K
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G ++ F+ M + P+ Y ++ CK G L F +E G PN +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 359 MKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
+LV + +A + +GLV ++T
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 272
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 37/293 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A + A F +MD + ++ ++NAL+ AK+ + E K GIKPDL
Sbjct: 317 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDL 375
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK------------E 229
Y I C +A ++ EM IK N+ + L+ ++K E
Sbjct: 376 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 435
Query: 230 EKYEDV----------------NKVL--------QMMERYGMKSGVSMYNVRIHSLCKLR 265
K D+ NK++ ++ +G+++ +++ I LCK
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 495
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A L ++M+ KG+ P+ Y+ + G K GN EA M+ G+ + Y
Sbjct: 496 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 555
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++V+ + + A F +E I +G P+ S++ + EA EL
Sbjct: 556 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ N TE + EM E + +V F L+ L K + F +G++
Sbjct: 421 FKSGNPTE-GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 479
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ + +I C+ + +A ++ +M +K + P+ +++ +L+ G +K+ + +
Sbjct: 480 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 539
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
M GMK + Y + L + +A++ L+EM+ +G+ P+ V
Sbjct: 540 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 587
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ EM ++ +V + +L L +E +++F E K +G+ P+L TY+ +I
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDG 278
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ + AY + E+ + PN FG LV GF K + + M ++G+
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +YN IH CK EA LL EM S + P+ TY+ I G C + EA + ++
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N + P+S+ Y ++++ CK + E AL C E A G PN T +L+ G
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN-- 456
Query: 371 KVSEAKELIGLVKEKFTKNV 390
V + K +GL E K +
Sbjct: 457 -VRDIKAAMGLYFEMTIKGI 475
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
S EK+L+ + + P ++ ++I I L N + E +K L N
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYI----YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ I Y + A +KE+ +L +V F L+ A++ + +F+
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K +G+ P+L YN +I C+S + A +L+EM+ ++ P+ ++ L+ G E++
Sbjct: 332 K-FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ N++ Q M+ + + YN IH CK +A L EM + G++PN +T+S
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+C + + A Y M+ G+ P+ Y ++ K + + AL + + G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
PN T LV G ++S A I +E + WN +
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVA---IDFYQEN-NQQRSCWNHV 550
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ Y + + + S +L EM IKPN + + ++ K E+
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ ++M+++G+ + Y+ I CK +A L E+L + PN V + + G
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK A+ + M G+ PN VY +++ CK G+ A+G E + P+
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAG 399
T L+ GL +V+EA L +K E+ + T+N + G
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 7/271 (2%)
Query: 112 FHAHSIILYGQA---NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+ ++ +++G NM E AV EM+ L V + L+ L I E R+F
Sbjct: 339 LYVYNCLIHGHCKSGNMLE-AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ K I P TYN +I +C+ + A + +EM ++PN +F L+ G+
Sbjct: 398 QKM-KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ + M G+ V Y I + K EA L +ML G+ PN T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT-MVYFMCKGGDYETALGFCKES 347
++ + GF K+G A FY+ +N S + V FT ++ +C+ G A F +
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQ-ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ G P+ + S++ G ++++ L
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMML 606
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + ++E+ R D +++I Y N + E
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + + + EV + +YG+KP++ YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L+EM +K + +F LV F + + V ++L+ M +G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M S G KPN+V+Y+ + G C G + +A++ M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G PN + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I L
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACAL 541
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 138/310 (44%), Gaps = 3/310 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I L F + + L ++ + R +A I + E A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + L+ +V +N +L L A+ +KE + + E F K + D T+N ++ FC++
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQN 369
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+L +M P+ ++ ++ GF KE ++ +L+ M G K Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + LC + +A+ L+ +M+ +G PN VT++ I CK G E+A + + M
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+G SP+ Y T++ + K G E AL + KG PN S+ L+ +V++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 375 AKELIGLVKE 384
++ +K+
Sbjct: 550 VIQMFDNIKD 559
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
++VR + M G N +L A+ E + + +G + D+ +YN V
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAV 222
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + ++ EM R PN +F L+ + +E V++VL M +G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ MY I +CK A +L+ M S G+KPN V Y+ + G C ++EA++
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M + + +V F C+ G + + ++ ++ G +P+ T +++ G
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 368 GASKVSEAKELI 379
+ EA L+
Sbjct: 403 KEGLIDEAVMLL 414
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q + + + ++M H V + ++ E + ++ + G KP
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV-MLLKSMSSCGCKP 424
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +Y V+K C + A ++++M ++ PN +F L+ K+ E ++L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G + Y+ I L K K EA LL+ M++KG+ PN++ YS ++
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + + + + ++ + ++ +Y ++ +CK + + A+ F ++ G +PN +T
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 360 KSLVTGLAGASKVSEAKELI 379
L+ GLA EA+EL+
Sbjct: 605 TMLIKGLASEGLAKEAQELL 624
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P Y+ +++A C S ++ +L M K + + ++ ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ + +G ++ + YN + LC ++ + + L+DEM+ PN VT++ I
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G FE + MS G +P+ +Y T++ +CK G E A + G PN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++ GL A + EA+EL+ E F K+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELL---SEMFQKD 351
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ + + + + I + + + + A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF--------PKTY------ 175
V K M + + ++ +L L A + + + + + P T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 176 --------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
G PDL +Y+ VI ++ + A +L M K I PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ ++ +E + VNKV+QM + ++S +YN I SLCK + A
Sbjct: 531 TIIYSSIACALSREGR---VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
M+S G PN TY+ I G +G +EA++ + + G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 95/225 (42%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ T+ V++ C + A +L EM K P + ++ + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+VL+ M G N+ ++++C+ EA LL ++ G + + V+Y+ + G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C + + ++ M +PN + T++ ++C+ G +E + G P+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+++ G+ + A E++ + K NV +N + GL
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + ++E+ R D +++I Y N + E
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + + + EV + +YG+KP++ YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L+EM +K + +F LV F + + V ++L+ M +G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M S G KPN+V+Y+ + G C G + +A++ M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G PN + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I L
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACAL 541
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 138/310 (44%), Gaps = 3/310 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I L F + + L ++ + R +A I + E A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + L+ +V +N +L L A+ +KE + + E F K + D T+N ++ FC++
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQN 369
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+L +M P+ ++ ++ GF KE ++ +L+ M G K Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + LC + +A+ L+ +M+ +G PN VT++ I CK G E+A + + M
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+G SP+ Y T++ + K G E AL + KG PN S+ L+ +V++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 375 AKELIGLVKE 384
++ +K+
Sbjct: 550 VIQMFDNIKD 559
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
++VR + M G N +L A+ E + + +G + D+ +YN V
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAV 222
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + ++ EM R PN +F L+ + +E V++VL M +G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ MY I +CK A +L+ M S G+KPN V Y+ + G C ++EA++
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M + + +V F C+ G + + ++ ++ G +P+ T +++ G
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 368 GASKVSEAKELI 379
+ EA L+
Sbjct: 403 KEGLIDEAVMLL 414
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q + + + ++M H V + ++ E + ++ + G KP
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV-MLLKSMSSCGCKP 424
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +Y V+K C + A ++++M ++ PN +F L+ K+ E ++L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G + Y+ I L K K EA LL+ M++KG+ PN++ YS ++
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + + + + ++ + ++ +Y ++ +CK + + A+ F ++ G +PN +T
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 360 KSLVTGLAGASKVSEAKELI 379
L+ GLA EA+EL+
Sbjct: 605 TMLIKGLASEGLAKEAQELL 624
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P Y+ +++A C S ++ +L M K + + ++ ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ + +G ++ + YN + LC ++ + + L+DEM+ PN VT++ I
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G FE + MS G +P+ +Y T++ +CK G E A + G PN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++ GL A + EA+EL+ E F K+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELL---SEMFQKD 351
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ + + + + I + + + + A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF--------PKTY------ 175
V K M + + ++ +L L A + + + + + P T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 176 --------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
G PDL +Y+ VI ++ + A +L M K I PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ ++ +E + VNKV+QM + ++S +YN I SLCK + A
Sbjct: 531 TIIYSSIACALSREGR---VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
M+S G PN TY+ I G +G +EA++ + + G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 95/225 (42%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ T+ V++ C + A +L EM K P + ++ + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+VL+ M G N+ ++++C+ EA LL ++ G + + V+Y+ + G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C + + ++ M +PN + T++ ++C+ G +E + G P+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+++ G+ + A E++ + K NV +N + GL
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
+NE + + I +A A++ F +M E +V + L+ AL+ + E +
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F E K G +P++ TY +I C+ + A +L+EM K + P+ ++ AL+ G+
Sbjct: 322 FNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KE +D ++L +ME YN I LCK RK +A ALL++ML + + P+ +
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I+G CK + E A + +M+ +GL P+ Y + +CK G E A
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
AKG N +L+ G K+ A L+ ++ + N T+N + GL
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 134/314 (42%), Gaps = 15/314 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER----FHAHSIILY---GQANMT 126
+ ++++ I+ L EA N E LK D+ + +++++Y G
Sbjct: 263 NEVSYTNLIHGLCEAGRIN------EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F EM E +V + L+ L E +++ E + G+ P + TYN
Sbjct: 317 E-ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK-GLIPSVVTYNA 374
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ A+ IL M+ S PN ++ L+ G K+ K +L M
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN IH CK+ A LL M G+ P+ TYS FI CK+G EEA
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + G+ N +Y ++ CK G + A + + +PN T L+ GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 367 AGASKVSEAKELIG 380
K+ EA L+
Sbjct: 555 CKEKKMKEASSLVA 568
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 1/308 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+++ I+ L + N + + L E+ + + + + I Y + M + A M+
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + +N L+ L + + + + + + P L TYN +I C+ +D
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITYNSLIHGQCKVNDL 455
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
SAY +L+ M+ + P+ ++ + KE + E+ + ++ G+K+ +Y
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I CK+ K A +LL+ ML+ PNS TY+ I G CK+ +EA M G+
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P Y ++ M K G ++ AL ++ G+ P+ T + + + E +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 378 LIGLVKEK 385
+I + E+
Sbjct: 636 VIAKMNEE 643
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 129 AVRTFKEMD---EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ F++M+ E K + ++ +N +L++L+ E+K V++E I P++ T+N
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQ-ISPNIYTFN 198
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C+ + A +++ + + P+ ++ +L+ G + + ++ +V +M +
Sbjct: 199 AMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK 258
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + Y IH LC+ + EA L +M P TY+ IY G EA
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M G PN Y ++ +CK + A E KG +P+ T +L+ G
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 366 LAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
+ +A E++ L++ N T+NE+ GL
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 1/239 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +M E KL S+ +N+L+ D + R + G+ PD TY+ I
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR-LLSLMNENGLVPDQWTYSVFI 481
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A ++ + K +K N + AL+ G+ K K + +L+ M
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YNV I LCK +K EA +L+ +ML+ G+KP VTY+ I KDG F+ A K
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M + G P+ Y ++ G E + +G +P+ T L+ G A
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 6/285 (2%)
Query: 118 ILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++GQ N E A R M+E+ L ++ + L +E +F + K
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF-DSVKAK 503
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+K + Y +I +C+ AYS+L M + PN+ ++ L+ G KE+K ++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ++ M G+K V Y + I + K A + + M+S G +P+ TY+ F++
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G EE M+ G+ P+ Y ++ + G A F K + G P+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV---DTWNEIE 397
+ L+ L+ +++ E + IG+ +V D W +E
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLE 728
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 112/288 (38%), Gaps = 30/288 (10%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+HA++ F M + V + A L A +EV V + + GI PDL TY
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE-GILPDLVTYTV 654
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV----------------------- 223
+I + + A+ L M KP+ L+
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714
Query: 224 ------AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
A +K +YE K+ + M +G VS+Y I C+ + EA+ L+ M
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+GM P+ Y+ + CK G + EA + M +GL P Y +V + G
Sbjct: 775 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 834
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E A ++ G+ + K L+ GL V E ELI +++EK
Sbjct: 835 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 7/310 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEH 128
L+++++ IN L + +++ L +L+ +PD+ HS+ + +
Sbjct: 165 QLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLC---KNKLLGD 221
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + EM + +V +NAL+ I KE + E K I PD+ T+N +I
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM-KLKNINPDVCTFNTLI 280
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A + +A +LA M + IKP+ ++ +L+ G++ K ++ V M + G+
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y I LCK + EA +L +EM K M P+ VTY+ I G CK+ + E A
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G+ P+ Y ++ +CKGG E A F + + KG+ N T ++ GL
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460
Query: 369 ASKVSEAKEL 378
A EA +L
Sbjct: 461 ADLFGEAMDL 470
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 37/308 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV +F M + FN +L +L K Y V +F +F ++ G PDL T N ++
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKF-ESNGATPDLCTLNILM 105
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNA-------------------------------- 216
FC + + A+S+LA + ++ PNA
Sbjct: 106 NCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQ 165
Query: 217 ---SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
S+ L+ G K + + V ++L+ +E + +K V MYN IHSLCK + +A L
Sbjct: 166 LNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDL 225
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
EM+ KG+ PN VTY+ +YGFC G+ +EA M ++P+ + T++ + K
Sbjct: 226 YSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGK 285
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDT 392
G + A + P+ T SL+ G +KV AK + + + T NV T
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345
Query: 393 WNEIEAGL 400
+ + GL
Sbjct: 346 YTTMIDGL 353
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++ L+ L + K V R+ + + + +KPD+ YN +I + C++ A + +E
Sbjct: 170 SYRTLINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSE 228
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K I PN ++ ALV GF ++ +L M+ + V +N I +L K K
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
AK +L M+ +KP+ VTY+ I G+ + AK + M+ SG++PN Y T
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
M+ +CK + A+ +E K +P+ T SL+ GL + A L +KE+
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIEF 171
++ ++YG M H F ++E KL++ V FN L+ AL K K V
Sbjct: 241 YNALVYGFCIMG-HLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K IKPD+ TYN +I + + +A + M + + PN ++ ++ G KE+
Sbjct: 300 MKA-CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM 358
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ + + M+ M + Y I LCK A AL +M +G++P+ +Y+
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ CK G E AK+F++ + G N Y M+ +CK + A+ + KG
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI 379
+P+ T K+++ L + +A++++
Sbjct: 479 CMPDAITFKTIICALFEKDENDKAEKIL 506
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 29/251 (11%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-----------------------DRKSI 212
G PD T+ +I A E ++ A IL EM + I
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACI 537
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ ++G L+ G++ + + V M + G+ V Y + I LCK + EA +
Sbjct: 538 KPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMS 597
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L +EM K M PN VTY+ I CK+ + E A + M G+ P+ Y ++ +C
Sbjct: 598 LFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 657
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKF 386
K G E A + + KG+ N +++ L A EA +L G + +
Sbjct: 658 KSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAV 717
Query: 387 TKNVDTWNEIE 397
T ++ W E
Sbjct: 718 TFDIIIWALFE 728
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE K V K IKPD+ TY ++ + ++ A + M + + PN +
Sbjct: 523 KEAKIVLAVMTKA-CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ G K++ ++ + + M+ M + Y I +LCK A ALL EM G
Sbjct: 582 MIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHG 641
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ +Y+ + G CK G E AK+ ++ + G N VY M+ +CK G ++ AL
Sbjct: 642 IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEAL 701
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKE 384
+ KG +P+ T ++ L + +A++++ GL+KE
Sbjct: 702 DLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
++ V +N+L+ K K VF ++ G+ P++ TY +I C+ A
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS-GVTPNVRTYTTMIDGLCKEKMVDEA 362
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
S+ EM K++ P+ ++ +L+ G K E + + M+ G++ V Y + + +
Sbjct: 363 MSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 422
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK + AK +L KG N TY+ I G CK F EA M G P+
Sbjct: 423 LCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ + T++ + + + + A +E IA+G
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREMIARGL 514
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 118/319 (36%), Gaps = 59/319 (18%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N ++A F M + + +V + ++ L K E +F E K + PD+ T
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM-KYKNMIPDIVT 380
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C++ A ++ +M + I+P+ S+ L+ K + E+ + Q +
Sbjct: 381 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL 440
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI---------- 293
G V YNV I+ LCK EA L +M KG P+++T+ I
Sbjct: 441 VKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDEND 500
Query: 294 -------------------------------------------YGFCKDGNF-----EEA 305
YG DG F + A
Sbjct: 501 KAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHA 560
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M+ G++PN Y M+ +CK + A+ +E K PN T SL+
Sbjct: 561 KYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDA 620
Query: 366 LAGASKVSEAKELIGLVKE 384
L + A L+ +KE
Sbjct: 621 LCKNHHLERAIALLKEMKE 639
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 157/337 (46%), Gaps = 7/337 (2%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDR---LAFSIAINKLSEANYFNGISQYLEELKT 103
+LL+ + +P+ L++ + S R L++ + I KL A FN + + L +LK
Sbjct: 14 SLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEMQEILAQLKE 73
Query: 104 RPDLQ-NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
E I YG+A + E+A++ E+ +++ +V ++N+LL + KD+
Sbjct: 74 ETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFD 133
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+++ +F+ K K D TYN +I+ FC S A + EM + + PN +FG L
Sbjct: 134 KMRELFVGIEKLG--KADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNL 191
Query: 223 VAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+ GF + ++ K+ M++ Y + +Y I +CK + + A L EM+
Sbjct: 192 IYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNK 251
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++ + YS I G K G EEA + M G P++ Y ++ CK D+E A
Sbjct: 252 IELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAY 311
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E + KG P+ + ++ L K EA +L
Sbjct: 312 RLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDL 348
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F EM + +V F L+ + KE ++ + K Y + P+ Y
Sbjct: 167 DDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYAS 226
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK C++ + S A+ + EM R I+ + + + L++G +K + E+ V + M+ G
Sbjct: 227 LIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERG 286
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K YNV I+ CK + A LLDEM+ KG KP+ ++Y+ + ++G EA
Sbjct: 287 YKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEAN 346
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G +P+ Y + C G ++ A E I KG+VP ++ V L
Sbjct: 347 DLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRL 406
Query: 367 AGASKVSEAKELIGLVKEKFTKNVDTW 393
+ +++ NVD W
Sbjct: 407 CEGKNEDLLRSAFNTLEKGKLVNVDLW 433
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
R+S+ +++ ++ L AK + E++ + + + P + +I + + +A
Sbjct: 41 FRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENA 100
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+L E+ ++ S+ +L++ F + ++ + ++ +E+ G K+ YN+ I
Sbjct: 101 LKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLG-KADACTYNLLIRG 159
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS-GLSP 319
C + +A + DEM ++G+ PN +T+ + IYGFC +EA K M + P
Sbjct: 160 FCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYP 219
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N+ +Y +++ +CK G+ A KE I + +L++GL A + EA +
Sbjct: 220 NAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVW 279
Query: 380 GLVKEK-FTKNVDTWNEI 396
+KE+ + + T+N I
Sbjct: 280 EDMKERGYKPDTVTYNVI 297
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
+NE + + I +A A++ F +M E +V + L+ AL+ + E +
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F E K G +P++ TY +I C+ + A +L+EM K + P+ ++ AL+ G+
Sbjct: 322 FNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KE +D ++L +ME YN I LCK RK +A ALL++ML + + P+ +
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I+G CK + E A + +M+ +GL P+ Y + +CK G E A
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
AKG N +L+ G K+ A L+ ++ + N T+N + GL
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 134/314 (42%), Gaps = 15/314 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER----FHAHSIILY---GQANMT 126
+ ++++ I+ L EA N E LK D+ + +++++Y G
Sbjct: 263 NEVSYTNLIHGLCEAGRIN------EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F EM E +V + L+ L E +++ E + G+ P + TYN
Sbjct: 317 E-ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK-GLIPSVVTYNA 374
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ A+ IL M+ S PN ++ L+ G K+ K +L M
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN IH CK+ A LL M G+ P+ TYS FI CK+G EEA
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + G+ N +Y ++ CK G + A + + +PN T L+ GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 367 AGASKVSEAKELIG 380
K+ EA L+
Sbjct: 555 CKEKKMKEASSLVA 568
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 1/308 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+++ I+ L + N + + L E+ + + + + I Y + M + A M+
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + +N L+ L + + + + + + P L TYN +I C+ +D
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITYNSLIHGQCKVNDL 455
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
SAY +L+ M+ + P+ ++ + KE + E+ + ++ G+K+ +Y
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I CK+ K A +LL+ ML+ PNS TY+ I G CK+ +EA M G+
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P Y ++ M K G ++ AL ++ G+ P+ T + + + E +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 378 LIGLVKEK 385
+I + E+
Sbjct: 636 VIAKMNEE 643
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 129 AVRTFKEMD---EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ F++M+ E K + ++ +N +L++L+ E+K V++E I P++ T+N
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNN-QISPNIYTFN 198
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C+ + A +++ + + P+ ++ +L+ G + + ++ +V +M +
Sbjct: 199 AMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK 258
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + Y IH LC+ + EA L +M P TY+ IY G EA
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M G PN Y ++ +CK + A E KG +P+ T +L+ G
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 366 LAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
+ +A E++ L++ N T+NE+ GL
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 1/239 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +M E KL S+ +N+L+ D + R + G+ PD TY+ I
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR-LLSLMNENGLVPDQWTYSVFI 481
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A ++ + K +K N + AL+ G+ K K + +L+ M
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YNV I LCK +K EA +L+ +ML+ G+KP VTY+ I KDG F+ A K
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M + G P+ Y ++ G E + +G +P+ T L+ G A
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 118 ILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++GQ N E A R M+E+ L ++ + L +E +F + K
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF-DSVKAK 503
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+K + Y +I +C+ AYS+L M + PN+ ++ L+ G KE+K ++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ++ M G+K V Y + I + K A + + M+S G +P+ TY+ F++
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G EE M+ G+ P+ Y ++ + G A F K + G P+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL 381
+ L+ L+ +++ E + IG+
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGI 709
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 110/277 (39%), Gaps = 19/277 (6%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+HA++ F M + V + A L A +EV V + + GI PDL TY
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE-GILPDLVTYTV 654
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK--------------- 231
+I + + A+ L M KP+ L+ E +
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714
Query: 232 ---YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
YE K+ + M +G VS+Y I C+ + EA+ L+ M +GM P+
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ + CK G + EA + M +GL P Y +V + G E A +
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ G+ + K L+ GL V E ELI +++EK
Sbjct: 835 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 871
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A++ F++M EH V + AL+ + +E + + K G+ P D YN
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQG-LVHHMKERGMSPSEDIYNS 777
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ + A ++ M + P S+ LV G Y E E V + G
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 837
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ V I L K E L+D M KG +PN +TYS I G
Sbjct: 838 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|224056581|ref|XP_002298921.1| predicted protein [Populus trichocarpa]
gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 162/325 (49%), Gaps = 8/325 (2%)
Query: 36 LTSKD--KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
LT KD + + ++ +P I+ + + + + ++ INKL++A F+
Sbjct: 2 LTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFDA 61
Query: 94 ISQYLEELKTRPD--LQNERFHAHSIILYGQ-ANMTEHAVRTFKEMDE-HKLRHSVGAFN 149
I ++++K L N+ FH + I +YGQ A + A+ T +M + + +V +FN
Sbjct: 62 IEDIMQKIKLDKSCRLSNDFFH-NVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFN 120
Query: 150 ALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
+L L AK + V V+++ P GI+ D+ + N +IK CE+ D +A+++L E +
Sbjct: 121 LVLNLLVSAKVFDVVHEVYLQAP-MLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPK 179
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+ +PN +F L+ G K+ K ++ +L+ ME+ G+ + +N+ I L K K E
Sbjct: 180 QRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVE 239
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
LL+ M KG +PN+ +Y +YG + E K+F M G+ P+ Y +V+
Sbjct: 240 GLELLERMNIKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVH 299
Query: 330 FMCKGGDYETALGFCKESIAKGWVP 354
+CK K+ +G+VP
Sbjct: 300 GLCKERLLRDLDWVLKQMARQGFVP 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 182 DTYNRVIKAFCE-SSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D ++ VIK + + + A L +M + + PN SF ++ + ++ V++V
Sbjct: 80 DFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFNLVLNLLVSAKVFDVVHEVY 139
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
G++ V N+ I LC+ A +LDE + +PN T+S ++G CK
Sbjct: 140 LQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPKQRCEPNVRTFSTLMHGLCKK 199
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA M G+ ++ + ++ + K G L + KG PN +
Sbjct: 200 GKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEGLELLERMNIKGCEPNAGSY 259
Query: 360 KSLVTGLAGASKVSEAKELI--------------------GLVKEKFTKNVDTW 393
+ ++ GL A K E KE + GL KE+ +++D W
Sbjct: 260 QEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVHGLCKERLLRDLD-W 312
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 10/309 (3%)
Query: 100 ELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLAL 155
EL TR P ++ ++ GQ ++ A + F EM D + + V + ++ AL
Sbjct: 170 ELSTRGASPSIKTCNILVEALGCGGQLDL---ARKVFGEMRDGNAVAPDVYTYTVMIKAL 226
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A + + E ++ GI+P + TYN ++ A C S A+ + M ++P+
Sbjct: 227 CRAGEIDAAFVMLAELERS-GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPS 285
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+FG L+ G + +++ +V+ VLQ ME +G+ +YN I C+ C+EA L D
Sbjct: 286 IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFD 345
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG- 334
EM+SKG+K VTY+ CK+G E A++ M +G++ + S++ ++V + +G
Sbjct: 346 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGT 405
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTW 393
G + L +E +A+ PN M + + L K EA E+ LV K N+ T
Sbjct: 406 GRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATS 465
Query: 394 NEIEAGLPQ 402
N + GL Q
Sbjct: 466 NALIHGLCQ 474
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A+ E A++ +M + + + FN L A +++ + + K+ G+KPD+
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM-KSEGLKPDI 567
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I +C++ D A L E+ + ++PNA + AL+ G+ + D VL
Sbjct: 568 VTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDT 627
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ G++ YN ++ +C EAK + + + K ++ + Y+ I GFCK G
Sbjct: 628 MKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGK 687
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA +++ M + PN Y T++Y CK G+ E A E ++ G VP+ + +
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNT 747
Query: 362 LVTG 365
L++G
Sbjct: 748 LISG 751
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
++ NAL+ L + KE +V + G++ D TYN +I+ C++S A +
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDS-GVEFDRITYNIMIQFCCKASKMEEAIQL 519
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+M ++ KP+ +F + + K ED+ +L M+ G+K + Y I CK
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +A L E++ G++PN+V Y+ I G+ ++G+ +A M ++G+ P
Sbjct: 580 AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPIT 639
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y +++Y+MC G E A + I K ++ G K+ EA
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEA 691
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 3/326 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F I IN L+ F + L+E++ NE + I + + A+R F E
Sbjct: 287 VTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDE 346
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ +V +N + AL + + +++ E G+ +N V+ +
Sbjct: 347 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM-LLAGMTVHCSLFNSVVAWHLRGT 405
Query: 196 DS-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ EM + +KPN + A + K K+E+ ++ ++ G+ ++
Sbjct: 406 GRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATS 465
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N IH LC+ EA +L M+ G++ + +TY+ I CK EEA + M
Sbjct: 466 NALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIK 525
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G P+ + T + C G E L + ++G P+ T +++ G A V +
Sbjct: 526 RGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHK 585
Query: 375 A-KELIGLVKEKFTKNVDTWNEIEAG 399
A K LI L+K N +N + G
Sbjct: 586 ANKYLIELIKNGLRPNAVIYNALIGG 611
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 3/250 (1%)
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-FIEFPKTYGIKPDLDTYNRVI 188
+R +EM L+ + A + L ++E + F+ K G+ ++ T N +I
Sbjct: 412 LRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV--NIATSNALI 469
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ ++ A +L M ++ + ++ ++ K K E+ ++ M + G K
Sbjct: 470 HGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFK 529
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +N + + C L K + LLD+M S+G+KP+ VTY I G+CK + +A K+
Sbjct: 530 PDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKY 589
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +GL PN+ +Y ++ + G A+G G P T SL+ +
Sbjct: 590 LIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCH 649
Query: 369 ASKVSEAKEL 378
A V EAKE+
Sbjct: 650 AGLVEEAKEI 659
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A++ F +M ++ + N LL +VKR F + G +P + TY
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTY 265
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ D +A + EM + + P+ ++ +++ GF K + +D + M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ V YN I+ CK K EM G+KPN V+YS + FCK+G ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A KFY M GL PN Y +++ CK G+ A E + G N T +L+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 365 GLAGASKVSEAKELIG 380
GL A ++ EA+EL G
Sbjct: 446 GLCDAERMKEAEELFG 461
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 11/264 (4%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPD 180
E A F+EM L +N+++ + +V R+ F E K +PD
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMI------DGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN +I FC+ EM +KPN S+ LV F KE + K
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M R G+ Y I + CK+ ++A L +EML G++ N VTY+ I G C
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA++ + M +G+ PN + Y +++ K + + AL E +G P+
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 361 SLVTGLAGASKVSEAKELIGLVKE 384
+ + GL K+ AK ++ +KE
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKE 535
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 7/316 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ + + + EE+K PD+ + +G+ + +
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI---GL 352
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++EM + L+ +V +++ L+ A ++ + +++ + G+ P+ TY +I A
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDA 411
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + S A+ + EM + ++ N ++ AL+ G E+ ++ ++ M+ G+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
++ YN IH K + A LL+E+ +G+KP+ + Y FI+G C E AK
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+ NS +Y T++ K G+ L E T L+ GL
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 371 KVSEAKELIGLVKEKF 386
VS+A + + F
Sbjct: 592 LVSKAVDYFNRISNDF 607
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 21/280 (7%)
Query: 129 AVRTFK-EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE----------FPKTYGI 177
A + FK M + +HSV ++ + L A+ Y + V E F +
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184
Query: 178 K----PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ P ++ + + A ++M R + P S L+ F K K +
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
DV + + M G + V YN+ I +CK A+ L +EM +G+ P++VTY+ I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GF K G ++ F+ M + P+ Y ++ CK G L F +E G
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
PN + +LV + +A + +GLV ++T
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R EM + + +V + AL+ L A+ KE + +F + T G+ P+L +YN +I
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALI 479
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ + A +L E+ + IKP+ +G + G EK E V+ M+ G+K
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEM------------------------LSK---- 280
+ +Y + + K E LLDEM +SK
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 281 --------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
G++ N+ ++ I G CKD E A + M GL P+ + Y +++
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK----ELIG 380
K G+ AL + G + SLV GL+ +++ +A+ E+IG
Sbjct: 660 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 37/293 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A + A F +MD + ++ ++NAL+ AK+ + E K GIKPDL
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDL 507
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK------------E 229
Y I C +A ++ EM IK N+ + L+ ++K E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 230 EKYEDV----------------NKVL--------QMMERYGMKSGVSMYNVRIHSLCKLR 265
K D+ NK++ ++ +G+++ +++ I LCK
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A L ++M+ KG+ P+ Y+ + G K GN EA M+ G+ + Y
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++V+ + + A F +E I +G P+ S++ + EA EL
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ N TE + EM E + +V F L+ L K + F +G++
Sbjct: 553 FKSGNPTE-GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ + +I C+ + +A ++ +M +K + P+ +++ +L+ G +K+ + +
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
M GMK + Y + L + +A++ L+EM+ +G+ P+ V
Sbjct: 672 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A++ K M ++H++ ++ L+ KD+ VF +F K G
Sbjct: 456 INLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD-G 514
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +I AFC S+ A ++ +M ++ +P +F ++ GF + +
Sbjct: 515 LKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRAL 574
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ MM R G V YN I L + RK A+A A+LD+M G+ PN TY+ + G+
Sbjct: 575 EIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGY 634
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ E+A +++ ++ N GL + Y ++ CK G ++AL KE AK N
Sbjct: 635 ASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNT 694
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
L+ G A V EA +L+ + KE ++ T+
Sbjct: 695 FVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYT 733
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G +NM + A+ K+M + + R + F ++ A + + +F + + G P
Sbjct: 531 GMSNM-DRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIF-DMMRRSGCIPT 588
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN +I E + A +IL +M+ + PN ++ L+ G+ E +
Sbjct: 589 VHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFS 648
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++ G++ V Y + S CK + A A+ EM +K + N+ Y+ I G+ + G
Sbjct: 649 VLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRG 708
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ EA + M G+ P+ Y + V CK GD + A +E A G PN T
Sbjct: 709 DVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYT 768
Query: 361 SLVTGLAGASKVSEA 375
+L+ G A AS +A
Sbjct: 769 TLINGWARASMPEKA 783
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 126/308 (40%), Gaps = 1/308 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI + ++ + + +E K + N + I + Q + A +E
Sbjct: 345 VTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVRE 404
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+ + + ++ ++ T+ + ++ VF K G P + +Y +I + +
Sbjct: 405 MEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL-KECGFSPSVISYGCLINLYTKIG 463
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A I M IK N ++ L+ GF K + + + V + + G+K V +YN
Sbjct: 464 KVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYN 523
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A ++ +M + +P + T+ I+GF + G A + + +M S
Sbjct: 524 NIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRS 583
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P Y ++ + + A+ + G PN T +L+ G A +A
Sbjct: 584 GCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKA 643
Query: 376 KELIGLVK 383
+ +++
Sbjct: 644 FQYFSVLR 651
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 125/298 (41%), Gaps = 7/298 (2%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHS----IILYGQANMTE--HAVRTFKEMDEHKLRHS 144
F G+S + +Q ER+ + I++G A E A+ F M +
Sbjct: 529 FCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPT 588
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +NAL+L L + + + + G+ P+ TY +++ + D+ A+
Sbjct: 589 VHTYNALILGLVEKRKMAKAVAILDQM-NVAGVGPNEHTYTTLMQGYASLGDTEKAFQYF 647
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+ + + ++ + ++ AL+ K + + V + M + +YN+ I +
Sbjct: 648 SVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARR 707
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA L+ +M +G+ P+ TY+ F+ CK G+ ++A + + M G+ PN Y
Sbjct: 708 GDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTY 767
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
T++ + E AL +E P+ L+T L + +++ GL+
Sbjct: 768 TTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSYVYSGLL 825
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY ++K+ C+S SA ++ EM K+I N + L+ G+ + +
Sbjct: 654 GLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEA 713
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M + G+ + Y +++ CK +A ++ EM + G+KPN TY+ I G
Sbjct: 714 ADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLING 773
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD------YETALGFCKESI 348
+ + E+A + M + L P+ + Y ++ + Y L C+E I
Sbjct: 774 WARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSYVYSGLLSVCREMI 832
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 119/282 (42%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + HA +TF+ M + S +++L+ A + +D +E + K GI+
Sbjct: 284 YARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKM-KEEGIEM 342
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TY+ ++ F + + +A E K NA ++G+++ + + ++
Sbjct: 343 TIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALV 402
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G+ + + +Y+ + + + + D + G P+ ++Y I + K
Sbjct: 403 REMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKI 462
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +A + ++M SG+ N Y ++ K D+ A ++ G P+
Sbjct: 463 GKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLY 522
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+++T G S + A ++ + KE++ T+ I G
Sbjct: 523 NNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGF 564
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP Y ++K + D A M + I+P++ + +L+ + E+
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M+ G++ + Y++ + K+ K A E K N+VTY IY C
Sbjct: 331 CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHC 390
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ N + A+ R M G+ +Y TM+ G+ E L G+ P+
Sbjct: 391 QTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVI 450
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVK 383
+ L+ KVS+A ++ ++K
Sbjct: 451 SYGCLINLYTKIGKVSKALQISKMMK 476
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 47 TLLKSESNPEKILEICRAAALTPES-HLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
+LL+ +++P+ L++ + P+ L++ + I KL + F+ + Q L +L+
Sbjct: 14 SLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLR--- 70
Query: 106 DLQNERFHAHSIIL------YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
+ RF II YG+A + + A++TF+ + E + + +V + N+LL AL K
Sbjct: 71 --RETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLKCK 128
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
++++ + K PD+ TYN +I A C S A+++ EM RK + PN +F
Sbjct: 129 EFEKFDGILSGIDKF--ATPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTF 186
Query: 220 GALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
G L++G + + ++ ++ + M++ + +K +Y + LC++ + + A L EM+
Sbjct: 187 GTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMV 246
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ ++ +S YS I K G +E M +G P++ Y M+ C D+E
Sbjct: 247 ANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFE 306
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIE 397
A G +E +AKG P+ + +++GL K EA +L + + T +V ++ +
Sbjct: 307 AAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILF 366
Query: 398 AGL 400
GL
Sbjct: 367 DGL 369
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 6/312 (1%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
K E F+GI +++ T PD+ ++ G A F EM +
Sbjct: 126 KCKEFEKFDGILSGIDKFAT-PDVCTYNVLINACCSSGSLG---DAWNVFDEMLRKHVCP 181
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V F L+ L E R+ + K + +KP+ Y ++K C ++ S A+ +
Sbjct: 182 NVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFEL 241
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM ++ ++ + L+A +K + ++V VL+ M G K YN I C
Sbjct: 242 KKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCN 301
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ A +L+EM++KG KP+ ++Y+ I G CK+G + EA + M G +P+
Sbjct: 302 EKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGS 361
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS-EAKELIGLV 382
Y + +C+G + A E + KG+ P + V L + K L LV
Sbjct: 362 YRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLV 421
Query: 383 KEKFTKNVDTWN 394
K D W+
Sbjct: 422 KGNVIDG-DAWS 432
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHA 129
HLD++++ IN L + Q L++++ + L N ++II+ + A
Sbjct: 161 HLDQVSYRTLINGLCKIGETRAALQMLKKIEGK--LVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ + EM ++ V FN+L+L + KE +F E I PD+ T++ ++
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPDVYTFSILVD 277
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C+ + + A ++LA M ++ + P+ ++ +L+ G+ + V M R G+
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YN+ I+ L K++ EA +L EM KG+ P++VTY+ I G CK G A +
Sbjct: 338 HAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLV 397
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M N+G+ + Y +++ +CK + A+ K+ +G P+ T L+ GL
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKG 457
Query: 370 SKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++ A+++ L+ + ++ N T+N + GL
Sbjct: 458 GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGL 489
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 7/283 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D FSI ++ L + L + + PD+ L + N +H
Sbjct: 268 DVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF 327
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
T + HS +N ++ L K E +F E GI PD TYN +I
Sbjct: 328 STMSRLGVAPHAHS---YNIMINGLGKIKMVDEALSLFKEMC-CKGIAPDTVTYNSLIDG 383
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ S A+ ++ EM I + ++ +L+ K + +++ ++ G++
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN+ I LCK + A+ + ++L KG N+ TY+ I G CK+G F EA+
Sbjct: 444 MYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLS 503
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
M N+G+ P++ Y T++ + + + E A +E I +G +
Sbjct: 504 KMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 134/356 (37%), Gaps = 106/356 (29%)
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDLDTYNRVI 188
V +F M + S+ FN +L ++ A + + + + GI P + T+N ++
Sbjct: 42 VSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILV 101
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV---------------------AGFY 227
+C + + A+SI A++ + P +F L+ GF+
Sbjct: 102 NCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFH 161
Query: 228 KEE-----------KYEDVNKVLQMMERYGMK---SGVSMYNVRIHSLCKLRKCAEAKAL 273
++ K + LQM+++ K + V MYN+ I+SLCK + ++A L
Sbjct: 162 LDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQL 221
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFC-----------------------------------K 298
EM++K + P+ VT++ I GFC K
Sbjct: 222 YSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCK 281
Query: 299 DGNF-----------------------------------EEAKKFYRIMSNSGLSPNSSV 323
DGN +AK + MS G++P++
Sbjct: 282 DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHS 341
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y M+ + K + AL KE KG P+ T SL+ GL ++S A +L+
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLV 397
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 6/242 (2%)
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS---DSSSAYSILAEMDRKSIKPNASSFG 220
+K FI + + I P ++ + F S D ++ S M R P+ F
Sbjct: 2 LKNRFIYYSNNFLIPPFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFN 61
Query: 221 ALVAGFYK--EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
++ K Y + +E G+ + +N+ ++ C L + A ++ ++L
Sbjct: 62 KILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKIL 121
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G P ++T++ I G C +G +EA F+ + G + Y T++ +CK G+
Sbjct: 122 KLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETR 181
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIE 397
AL K+ K + ++ L VS+A +L ++ ++ + +V T+N +
Sbjct: 182 AALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLI 241
Query: 398 AG 399
G
Sbjct: 242 LG 243
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N LL L K ++ V+ E GIKPD+ T+N ++KA C + +A +L E
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEE 206
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + + P+ ++F L+ GF +E E +V M G + NV I+ CKL +
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A + + ++ G +P+ +TY+ F+ G C++ + A K +M G P+ Y
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
+V +CK G E A G + + +G +P+ TT +L+ L +++ EA +L V K
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 386 FTKNVDTWN 394
+ +V T+N
Sbjct: 387 VSPDVYTFN 395
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 1/281 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++I +N L + L ++ R L + I N E A+
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+++ + V FN L+ AL D R+F E K G PD TYN +I C
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCS 438
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M+ + ++ ++ G K+ + E+ +V M+ G+
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I LCK +K +A L+++M+S+G++PN++TY+ + +CK G+ ++A M+
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+G + Y T++ +CK G + AL + KG P
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 7/309 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D++ ++ +N L + ++ + ++ + PD+ + + GQ E A
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ---LEEAK 341
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M + + FN L+ AL +E + + G+ PD+ T+N +I A
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILINA 400
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ D A + EM P+ ++ L+ K +L+ ME G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I LCK + EA+ + D+M +G+ N++T++ I G CKD ++A +
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL PN+ Y +++ CK GD + A + A G+ + T +L+ GL A
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 371 KVSEAKELI 379
+ A +++
Sbjct: 581 RTQVALKVL 589
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ + L A+ LEE+ +R +E + + + E A+R
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M E + N L+ Y ++ RV +I+ G +PD TYN +
Sbjct: 240 ARMLEMGCSATKVTVNVLI------NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A ++ M ++ P+ ++ +V K + E+ +L M G
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
++ +N I +LC + EA L ++ KG+ P+ T++ I CK G+ A +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M NSG +P+ Y T++ +C G AL K+ + G + T +++ GL
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 369 ASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
++ EA+E+ + + ++N T+N + GL
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E+ L++ R + S D F+I IN L + + + EE+K +E +
Sbjct: 373 EEALDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I A+ K+M+ S +N ++ L +E + VF +
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQ 490
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI + T+N +I C+ A+ ++ +M + ++PN ++ +++ + K+ +
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G + V Y I+ LCK + A +L M KGM+P Y+ +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YETALGFCKESIAKGWVP 354
+ N +A +R M+ G P++ Y + +C+GG + A F E + KG++P
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Query: 355 NFTTMKSLVTGL 366
F++ + L GL
Sbjct: 671 EFSSFRMLAEGL 682
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN ++ A EV +FI+ K G+ P++ TY +I A C+ A +M
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKM-KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + PN F +LV G +K+E V ++ M G++ + +N + +LCK +
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ L+D M+ G+KP+ ++Y+ I G C +EA K M ++GL PN Y T+
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKF 386
++ CK G + A +E + KG P T +++ GL + + SEA+EL + ++K +
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK 746
Query: 387 TKNVDTWNEIEAG 399
++ T++ I G
Sbjct: 747 LWSICTYSIILDG 759
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 151/330 (45%), Gaps = 8/330 (2%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D L ++I I+ L +A + G+ Q + + +P+ H + GQ E V
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ---WEEVV 420
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ KEM H L V + LL L E + +F + GIKP + Y ++
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK-GIKPSVTIYGIMLHG 479
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + S + +L M I PN F ++ + K ++V + M++ G+
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y I +LCKL + +A ++M+++G+ PN+V ++ +YG C +E+ ++ +
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G+ P+ + T++ +CK G A + G P+ + +L+ G AS
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 371 KVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
++ EA +L+ G+V N+ ++N + G
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A F++M + ++ +N ++ L A+ + + VF + G+KPD
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK-GVKPDN 365
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I C++ A + +M K +KPN ++ L+ G+ ++E+V + ++
Sbjct: 366 LTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKE 425
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + ++ V Y + + LCK KC EA++L D M+ KG+KP+ Y ++G+ K G
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E +M +G+SPN ++ T++ K + + + +G PN T +
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545
Query: 362 LVTGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEIEAGL 400
L+ L +V +A + ++ E T N +N + GL
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN +I C++ + A + +M K +KPN ++ ++ G K ++ +
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
V Q M G+K YN I LCK + A+ + +M+ +G+KP+ VTY+ I G
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK ++A+ ++ M + G+ P++ Y ++ +CK + A G ++ I KG PN
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G + E + I
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRI 423
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEH 128
D + ++ I+ L +A + G+ Q + + +PD ++II+ G +A +
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD-----NLTYTIIIDGLCKAQSVDR 383
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F++M + ++ + G +N L+ ++EV + E + ++PD+ TY ++
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM-SAHDLEPDVFTYGLLL 442
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ + A S+ M RK IKP+ + +G ++ G+ K+ +++ +L +M G+
Sbjct: 443 DYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGIS 502
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
++N I + K E + +M +G+ PN VTY I CK G ++A
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M N G++PN+ V+ ++VY +C +E E + +G P+ +++ L
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+V EA+ LI +V +V ++N + G
Sbjct: 623 EGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 6/267 (2%)
Query: 114 AHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++I++ G N + A F EM + V +N ++ L A++ + VF +
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM 251
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G+KP+ TYN +I C++ + A + +M K +KP+ ++ ++ G K +
Sbjct: 252 VEK-GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ V Q M G+K YN I LCK + +A+ + +M+ KG+KP+++TY+
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G CK + + A+ ++ M + G+ PN+ Y +++ G +E + KE A
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ T L+ L K +EA+ L
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSL 457
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 118 ILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++YG + E F EM +R + FN +L L E +R I+
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARR-LIDSMVCM 639
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KPD+ +YN +I C +S A +L M +KPN S+ L+ G+ K + ++
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R G+ GV YN ++ L + + +EA+ L M+ + TYS + G
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK+ F+EA K ++ + + L + + M+ + KGG E A+ A G VP+
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
T + + L + E L ++++ T
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGT 851
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 16/290 (5%)
Query: 123 ANMTEH-AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-----TYG 176
N+ H A++ F E+ H SV A N LL ++ AK K F + +
Sbjct: 20 GNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNK 79
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDV 235
+ PD TY+ VI FC ++ + + + + L+ G ++ E +
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML---SKGMKPNSVTYSHF 292
+ +L+ M G + GV YN + LC R+ EA+ LL M+ P+ V+Y+
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GF +G ++A Y + G+SP+ Y T++ +CK + + A ++ + KG
Sbjct: 200 INGFFNEGQVDKA---YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
PN T +++ GL A +V A+ + + +K K NV T+N I GL
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNV-TYNTIIDGL 305
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A+ + AV+ M L+ ++ ++N LL A +F E + G+ P ++
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK-GVTPGVE 716
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN ++ S S A + M + + ++ ++ GF K +++ K+ Q +
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSL 776
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
++ + +N+ I L K + +A L + + G+ P+ VTY ++G+
Sbjct: 777 CSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSL 836
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMV 328
EE + +M SG +PNS + ++
Sbjct: 837 EELDCLFSVMEKSGTAPNSHMLNALI 862
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N LL L K ++ V+ E GIKPD+ T+N ++KA C + +A +L E
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 206
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + + P+ ++F L+ GF +E E +V M G + NV I+ CKL +
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A + + ++ G +P+ +TY+ F+ G C++ + A K +M G P+ Y
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
+V +CK G E A G + + +G +P+ TT +L+ L +++ EA +L V K
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 386 FTKNVDTWN 394
+ +V T+N
Sbjct: 387 VSPDVYTFN 395
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 1/281 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++I +N L + L ++ R L + I N E A+
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+++ + V FN L+ AL D R+F E K G PD TYN +I C
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCS 438
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M+ + ++ ++ G K+ + E+ +V M+ G+
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I LCK +K +A L+++M+S+G++PN++TY+ + +CK G+ ++A M+
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+G + Y T++ +CK G + AL + KG P
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 7/309 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D++ ++ +N L + ++ + ++ + PD+ + + GQ E A
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ---LEEAK 341
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M + + FN L+ AL +E + + G+ PD+ T+N +I A
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILINA 400
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ D A + EM P+ ++ L+ K +L+ ME G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I LCK + EA+ + D+M +G+ N++T++ I G CKD ++A +
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL PN+ Y +++ CK GD + A + A G+ + T +L+ GL A
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 371 KVSEAKELI 379
+ A +++
Sbjct: 581 RTQVALKVL 589
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ + L A+ LEE+ +R +E + + + E A+R
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M E + N L+ Y ++ RV +I+ G +PD TYN +
Sbjct: 240 ARMLEMGCSATKVTVNVLI------NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A ++ M ++ P+ ++ +V K + E+ +L M G
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
++ +N I +LC + EA L ++ KG+ P+ T++ I CK G+ A +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M NSG +P+ Y T++ +C G AL K+ + G + T +++ GL
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 369 ASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
++ EA+E+ + + ++N T+N + GL
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E+ L++ R + S D F+I IN L + + + EE+K +E +
Sbjct: 373 EEALDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I A+ K+M+ S +N ++ L +E + VF +
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQ 490
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI + T+N +I C+ A+ ++ +M + ++PN ++ +++ + K+ +
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G + V Y I+ LCK + A +L M KGM+P Y+ +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YETALGFCKESIAKGWVP 354
+ N +A +R M+ G P++ Y + +C+GG + A F E + KG++P
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Query: 355 NFTTMKSLVTGL 366
F++ + L GL
Sbjct: 671 EFSSFRMLAEGL 682
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N LL L K ++ V+ E GIKPD+ T+N ++KA C + +A +L E
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 206
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + + P+ ++F L+ GF +E E +V M G + NV I+ CKL +
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A + + ++ G +P+ +TY+ F+ G C++ + A K +M G P+ Y
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
+V +CK G E A G + + +G +P+ TT +L+ L +++ EA +L V K
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 386 FTKNVDTWN 394
+ +V T+N
Sbjct: 387 VSPDVYTFN 395
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 1/281 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++I +N L + L ++ R L + I N E A+
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+++ + V FN L+ AL D R+F E K G PD TYN +I C
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCS 438
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M+ + ++ ++ G K+ + E+ +V M+ G+
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I LCK +K +A L+++M+S+G++PN++TY+ + +CK G+ ++A M+
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+G + Y T++ +CK G + AL + KG P
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 7/309 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D++ ++ +N L + ++ + ++ + PD+ + + GQ E A
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ---LEEAK 341
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M + + FN L+ AL +E + + G+ PD+ T+N +I A
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILINA 400
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ D A + EM P+ ++ L+ K +L+ ME G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I LCK + EA+ + D+M +G+ N++T++ I G CKD ++A
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL PN+ Y +++ CK GD + A + A G+ + T +L+ GL A
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 371 KVSEAKELI 379
+ A +++
Sbjct: 581 RTQVALKVL 589
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ + L A+ LEE+ +R +E + + + E A+R
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M E + N L+ Y ++ RV +I+ G +PD TYN +
Sbjct: 240 ARMLEMGCSATKVTVNVLI------NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A ++ M ++ P+ ++ +V K + E+ +L M G
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
++ +N I +LC + EA L ++ KG+ P+ T++ I CK G+ A +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M NSG +P+ Y T++ +C G AL K+ + G + T +++ GL
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 369 ASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
++ EA+E+ + + ++N T+N + GL
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E+ L++ R + S D F+I IN L + + + EE+K +E +
Sbjct: 373 EEALDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I A+ K+M+ S +N ++ L +E + VF +
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQ 490
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI + T+N +I C+ A+ ++ +M + ++PN ++ +++ + K+ +
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G + V Y I+ LCK + A +L M KGM+P Y+ +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YETALGFCKESIAKGWVP 354
+ N +A +R M+ G P++ Y + +C+GG + A F E + KG++P
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Query: 355 NFTTMKSLVTGL 366
F++ + L GL
Sbjct: 671 EFSSFRMLAEGL 682
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 150/330 (45%), Gaps = 9/330 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D +A++ + A + + + E+ PD + ++ ++ G T +A+
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPD-----AYTYNTLIRGLCGRGRTANALA 179
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM + V + LL A YK+ ++ E + G PD+ TYN V+
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNGI 238
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A L + +PN S+ ++ G E++ED +++ M + G V
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+N+ I LC+ A +L+++ G PNS++Y+ ++ FCK ++A F +
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G P+ Y T++ +C+ G+ + A+ + KG P + +++ GL A K
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + ++ T++ I AGL
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGL 448
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 154/325 (47%), Gaps = 9/325 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L+ L + N +++
Sbjct: 214 KLLDEMRDKGCTP----DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT--VSYN 267
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+L G A E A EM + +V FN L+ L + V + PK
Sbjct: 268 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK- 326
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P+ +YN ++ AFC+ A + L M + P+ S+ L+ + + +
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L ++ G + YN I L K K EA LL+EM+SKG++P+ +TYS
Sbjct: 387 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 446
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C++ E+A + + + + G+ PN+ +Y ++ +CK + +A+ I G +P
Sbjct: 447 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 506
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N +T L+ GLA + EA++L+
Sbjct: 507 NESTYTILIEGLAYEGLIKEARDLL 531
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 1/278 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I + L A + + + E+ + N I + + E A+ ++
Sbjct: 264 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 323
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ ++ + ++N LL A K + F++ + G PD+ +YN ++ A C S
Sbjct: 324 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVSRGCYPDIVSYNTLLTALCRSG 382
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A +L ++ K P S+ ++ G K K ++ ++L M G++ + Y+
Sbjct: 383 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 442
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
LC+ + +A ++ G++PN+V Y+ I G CK A + M +
Sbjct: 443 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 502
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G PN S Y ++ + G + A E ++G V
Sbjct: 503 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 7/289 (2%)
Query: 100 ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
ELK R L E I +G + E + ++ M E+ + S+ +N L+ L +
Sbjct: 173 ELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSM 232
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+ ++VF E I PD TYN +IK +C++ A +M+ K++KP+ ++
Sbjct: 233 FIESAEKVF-EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITY 291
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ Y E ++ + ME G++ Y++ I LCK RKC EA A+ + M
Sbjct: 292 MTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQ 351
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG + N Y+ I + K+G+ EEA + + M N G P++ Y +V +CK G +
Sbjct: 352 KGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDD 411
Query: 340 AL---GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ FC+ KG N SL+ GL A ++ +A+ L + EK
Sbjct: 412 GMELFDFCRN---KGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEK 457
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 15/299 (5%)
Query: 86 SEANYFNGISQYLE----ELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEH 139
SE ++ +S YLE L+ P H++S+++ G + A F+ M++
Sbjct: 300 SERDFDTCLSLYLEMEERGLEIPP-------HSYSLVIGGLCKQRKCMEAYAVFETMNQK 352
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
R +V + AL+ + + +E R+F E K G +PD TY+ ++ C+S
Sbjct: 353 GCRANVAIYTALIDSYSKNGSMEEAMRLF-ERMKNEGFEPDAVTYSVLVNGLCKSGRLDD 411
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
+ K + NA + +L+ G K + ED + + M G YN I
Sbjct: 412 GMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIID 471
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+L K K +A AL M +G T++ I G K+ EEA KF+ M + G++P
Sbjct: 472 ALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITP 531
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ + + +C G A + G +P T + ++ L A ++ EA +L
Sbjct: 532 TVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLCKAQRIKEACKL 589
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 4/360 (1%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDR--LAFSIAINKLSEANYFNGISQYLEEL 101
AA +L+KS N + E+ E+ +D ++ +N L + + + E +
Sbjct: 185 AANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVM 244
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+ + + I Y +A + A+ F++M+ ++ + L+ A +D+
Sbjct: 245 DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF 304
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+++E + G++ +Y+ VI C+ AY++ M++K + N + + A
Sbjct: 305 DTCLSLYLEMEER-GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTA 363
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ + K E+ ++ + M+ G + Y+V ++ LCK + + L D +KG
Sbjct: 364 LIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKG 423
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ N++ Y+ I G K G E+A+ + MS G + +S Y ++ + K G + AL
Sbjct: 424 VAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQAL 483
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+G T L+ GL K EA + ++ + T V ++ + GL
Sbjct: 484 ALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 543
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+L G +NM EH + +F KL + F +L ++ + + + R F K
Sbjct: 88 LLDGSSNM-EHNLDSFCRKFFVKLSPNFVTF--VLQSVELREKPEVAVRFFFWAGKQKKY 144
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
++ + +I+ S+D + E+ + + S+ +L+ F E++
Sbjct: 145 VHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLW 204
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
V + M+ G+ + YN ++ L A+ + + M + P++VTY+ I G+C
Sbjct: 205 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 264
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G ++A + +R M + P+ Y T++ D++T L E +G
Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324
Query: 358 TMKSLVTGLAGASKVSEA 375
+ ++ GL K EA
Sbjct: 325 SYSLVIGGLCKQRKCMEA 342
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 7/289 (2%)
Query: 100 ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
ELK R L E I +G + E + ++ M E+ + S+ +N L+ L +
Sbjct: 175 ELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSM 234
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+ ++VF E I PD TYN +IK +C++ A +M+ K++KP+ ++
Sbjct: 235 FIESAEKVF-EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITY 293
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ Y E ++ + ME G++ Y++ I LCK RKC EA A+ + M
Sbjct: 294 MTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQ 353
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG + N Y+ I + K+G+ EEA + + M N G P++ Y +V +CK G +
Sbjct: 354 KGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDD 413
Query: 340 AL---GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ FC+ KG N SL+ GL A ++ +A+ L + EK
Sbjct: 414 GMELFDFCRN---KGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEK 459
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 15/299 (5%)
Query: 86 SEANYFNGISQYLE----ELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEH 139
SE ++ +S YLE L+ P H++S+++ G + A F+ M++
Sbjct: 302 SERDFDTCLSLYLEMEERGLEIPP-------HSYSLVIGGLCKQRKCMEAYAVFETMNQK 354
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
R +V + AL+ + + +E R+F E K G +PD TY+ ++ C+S
Sbjct: 355 GCRANVAIYTALIDSYSKNGSMEEAMRLF-ERMKNEGFEPDAVTYSVLVNGLCKSGRLDD 413
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
+ K + NA + +L+ G K + ED + + M G YN I
Sbjct: 414 GMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIID 473
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+L K K +A AL M +G T++ I G K+ EEA KF+ M + G++P
Sbjct: 474 ALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITP 533
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ + + +C G A + G +P T + ++ L A ++ EA +L
Sbjct: 534 TVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLCKAQRIKEACKL 591
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 4/360 (1%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDR--LAFSIAINKLSEANYFNGISQYLEEL 101
AA +L+KS N + E+ E+ +D ++ +N L + + + E +
Sbjct: 187 AANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVM 246
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+ + + I Y +A + A+ F++M+ ++ + L+ A +D+
Sbjct: 247 DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF 306
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+++E + G++ +Y+ VI C+ AY++ M++K + N + + A
Sbjct: 307 DTCLSLYLEMEER-GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTA 365
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ + K E+ ++ + M+ G + Y+V ++ LCK + + L D +KG
Sbjct: 366 LIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKG 425
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ N++ Y+ I G K G E+A+ + MS G + +S Y ++ + K G + AL
Sbjct: 426 VAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQAL 485
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+G T L+ GL K EA + ++ + T V ++ + GL
Sbjct: 486 ALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 545
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+L G +NM EH + +F KL + F +L ++ + + + R F K
Sbjct: 90 LLDGSSNM-EHNLDSFCRKFFVKLSPNFVTF--VLQSVELREKPEVAVRFFFWAGKQKKY 146
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
++ + +I+ S+D + E+ + + S+ +L+ F E++
Sbjct: 147 VHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLW 206
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
V + M+ G+ + YN ++ L A+ + + M + P++VTY+ I G+C
Sbjct: 207 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 266
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G ++A + +R M + P+ Y T++ D++T L E +G
Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326
Query: 358 TMKSLVTGLAGASKVSEA 375
+ ++ GL K EA
Sbjct: 327 SYSLVIGGLCKQRKCMEA 344
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 18/300 (6%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S IL+G N+ A FK+M E + + F L+ L + E VF E
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF-ET 175
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G++PD+ TYN ++ +C S A + MDRK PN S+ L+ G K +
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ +L M + + Y+ + C++ + EA+ LL EM S G+ PN +TYS
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ G CK G+ +EA + + M S + PN +Y ++ MC G E A KG
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI---------------GLVKEKFTKNVDTWNEI 396
P T +++GL +EA EL ++ + F +N DT N +
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 11/320 (3%)
Query: 86 SEANYFNGISQYLEELKT--RPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKL 141
S+A + + + E +K PD+ +S I+ G M T A++ K+M+E
Sbjct: 22 SKAKIMDAVKLFDEMVKMGHEPDV-----ITYSTIINGLCKMGNTTMALQLLKKMEEKGC 76
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ +V A+N ++ +L + E F E K GI PD+ TY+ ++ FC + A
Sbjct: 77 KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEAT 135
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M +++ PN +F L+ G K+ + V + M G++ V YN +
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + EA+ L + M KG PN +Y+ I G CK G +EAK MS+ L+P+
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
Y T++ C+ G + A KE + G +PN T ++ GL + EA EL+
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315
Query: 382 VKE-KFTKNVDTWNEIEAGL 400
++E K N+ + + G+
Sbjct: 316 MQESKIEPNIFIYTILIEGM 335
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 2/263 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L+ ++ FN LL L + ++F E K G +PD+ TY+ +I C+ +++ A
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVK-MGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+L +M+ K KPN ++ ++ K+ + M + G+ V Y+ +H
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
C L + EA +L +M+ + + PN VT++ I G CK EA + M+ GL P+
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y +V C + A KG PN + L+ G + ++ EAK L+
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244
Query: 381 LVKEK-FTKNVDTWNEIEAGLPQ 402
+ K T ++ T++ + G Q
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQ 267
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M A F+ M E L V +NAL+ E +++F G P++ +Y
Sbjct: 165 MISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLF-NIMDRKGCAPNVRSY 223
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+S A +LAEM KS+ P+ ++ L+ GF + + ++ ++L+ M
Sbjct: 224 NILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS 283
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG+ + Y++ + LCK EA LL M ++PN Y+ I G C G E
Sbjct: 284 YGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEA 343
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A++ + + G+ P Y M+ + KGG A +E G +PN T ++
Sbjct: 344 ARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQ 403
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
G A LI +V + F+ + T+
Sbjct: 404 GFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P L T+N ++ C + A + EM + +P+ ++ ++ G K
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ ME G K V YN I SLCK R EA EM+ +G+ P+ TYS ++G
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G EA ++ M + PN + ++ +CK A + KG P+
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T +LV G S++ EA++L ++ K NV ++N + G
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILING 229
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 135/290 (46%), Gaps = 3/290 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
+++ F+I I+ L + + E + T L+ + + ++++ Y + + A +
Sbjct: 149 NKVTFTILIDGLCKKRMISEAWLVFETM-TEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F MD +V ++N L+ + E K + E + PD+ TY+ +++ FC
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK-SLTPDIFTYSTLMRGFC 266
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L EM + PN ++ ++ G K ++ ++L+ M+ ++ +
Sbjct: 267 QVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIF 326
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y + I +C K A+ L + KG++P VTY+ I G K G EA + +R M
Sbjct: 327 IYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM 386
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ +G PNS Y ++ + GD A+ +E + KG+ + +T + L
Sbjct: 387 AVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + ++P +F L++G + K D K+ M + G + V Y+ I+ LCK+
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A LL +M KG KPN V Y+ I CKD EA F+ M G+ P+ Y +
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
+++ C G A K+ + + +PN T L+ GL +SEA + + EK
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 386 FTKNVDTWNEIEAG 399
+V T+N + G
Sbjct: 181 LEPDVYTYNALVDG 194
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
LQN RF A+R KEM E + + +N+L++ L+ AK E +
Sbjct: 463 LQNSRFG--------------DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN----------- 215
+E + G+KP+ TY I + E+S+ +SA + EM + PN
Sbjct: 509 FLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 216 ------------------------ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
A ++ L+ G +K +K +D ++ + M G+ V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y V I+ KL +A ++ DEM+ +G+ PN + Y+ + GFC+ G E+AK+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL PN+ Y T++ CK GD A E KG VP+ +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 372 VSEAKELIG 380
V A + G
Sbjct: 748 VERAITIFG 756
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 3/307 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD +S+ I+ L + + + E+ + + I + + + E A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-TYGIKPDLDTYNRVIKAF 191
F M L A+ +L+ K+ ++ + +E K I P TY V+K
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY--TYGTVVKGM 427
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S D AY+I+ EM +PN + L+ F + ++ D +VL+ M+ G+ +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I L K ++ EA++ L EM+ G+KPN+ TY FI G+ + F A K+ +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G+ PN + ++ CK G A + + +G + + T L+ GL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 372 VSEAKEL 378
V +A+E+
Sbjct: 608 VDDAEEI 614
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 27/347 (7%)
Query: 57 KILEICRA-AALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNER 111
K++E C A ++ + L D +++ +N L + + + + E++ + PD+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV---- 627
Query: 112 FHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
++ +++ G + + + A F EM E L +V +N LL + + ++ K +
Sbjct: 628 -FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E G+ P+ TY +I +C+S D + A+ + EM K + P++ + LV G +
Sbjct: 687 EM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR- 744
Query: 230 EKYEDVNKVLQMM--ERYGMKSGVSMYNVRIHSLCKLRKCAEAKA-----LLDEMLSKGM 282
DV + + + + G S + +N I+ + K K E K L+D +
Sbjct: 745 --LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK-TELKTEVLNRLMDGSFDRFG 801
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KPN VTY+ I CK+GN E AK+ + M N+ L P Y +++ K G
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
E+IA G P+ ++ ++A + LV + F KN
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA---LVLVDQMFAKN 905
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P TY+ +I C+ A S+L EMD + + ++ L+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M +G+ MY+ I + K +AKAL D M++ G+ P + Y+ I G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ N + + M + + Y T+V MC GD + A KE IA G PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ S+ +A ++ +KE+ ++ +N + GL +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP+ TYN +I C+ + +A + +M ++ P ++ +L+ G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-----GMKPNSVTYSHF 292
V G++ MY+V I++ K +A L+D+M +K G K + T
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ GF K G E A+K M P+S+ ++ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
LQN RF A+R KEM E + + +N+L++ L+ AK E +
Sbjct: 463 LQNSRFG--------------DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN----------- 215
+E + G+KP+ TY I + E+S+ +SA + EM + PN
Sbjct: 509 FLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 216 ------------------------ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
A ++ L+ G +K +K +D ++ + M G+ V
Sbjct: 568 CKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y V I+ KL +A ++ DEM+ +G+ PN + Y+ + GFC+ G E+AK+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL PN+ Y T++ CK GD A E KG VP+ +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 372 VSEAKELIG 380
V A + G
Sbjct: 748 VERAITIFG 756
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 3/307 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD +S+ I+ L + + + E+ + + I + + + E A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-TYGIKPDLDTYNRVIKAF 191
F M L A+ +L+ K+ ++ + +E K I P TY V+K
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY--TYGTVVKGM 427
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S D AY+I+ EM +PN + L+ F + ++ D +VL+ M+ G+ +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I L K ++ EA++ L EM+ G+KPN+ TY FI G+ + F A K+ +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G+ PN + ++ CK A + + +G + + T L+ GL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 372 VSEAKEL 378
V +A+E+
Sbjct: 608 VDDAEEI 614
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 158/356 (44%), Gaps = 27/356 (7%)
Query: 48 LLKSESNPEKILEICRA-AALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTR- 104
L+ EK++E C A ++ + L D +++ +N L + + + + E++ +
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 105 --PDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
PD+ ++ +++ G + + + A F EM E L +V +N LL + +
Sbjct: 623 IAPDV-----FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
++ K + E G+ P+ TY +I +C+S D + A+ + EM K + P++ +
Sbjct: 678 IEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 221 ALVAGFYKEEKYEDVNKVLQMM--ERYGMKSGVSMYNVRIHSLCKLRKCAEAKA-----L 273
LV G + DV + + + + G S + +N I+ + K K E K L
Sbjct: 737 TLVDGCCR---LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK-TELKTEVLNRL 792
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+D + KPN VTY+ I CK+GN E AK+ + M N+ L P Y +++ K
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
G E+IA G P+ ++ ++A + LV + F KN
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA---LVLVDQMFAKN 905
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P TY+ +I C+ A S+L EMD + + ++ L+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M +G+ MY+ I + K +AKAL D M++ G+ P + Y+ I G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ N + + M + + Y T+V MC GD + A KE IA G PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ S+ +A ++ +KE+ ++ +N + GL +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ Y +IK F ++S A +L EM + I P+ + +L+ G K ++ ++
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
L M G+K Y I + + A A + EM G+ PN V + I
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK EA YR M + G+ ++ Y ++ + K + A +E KG P+
Sbjct: 567 YCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ L+ G + + +A + +V+E T NV +N + G
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP+ TYN +I C+ + +A + +M ++ P ++ +L+ G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-----GMKPNSVTYSHF 292
V G++ MY+V I++ K +A L+D+M +K G K + T
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ GF K G E A+K M P+S+ ++ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
LQN RF A+R KEM E + + +N+L++ L+ AK E +
Sbjct: 463 LQNSRFG--------------DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN----------- 215
+E + G+KP+ TY I + E+S+ +SA + EM + PN
Sbjct: 509 FLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 216 ------------------------ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
A ++ L+ G +K +K +D ++ + M G+ V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y V I+ KL +A ++ DEM+ +G+ PN + Y+ + GFC+ G E+AK+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL PN+ Y T++ CK GD A E KG VP+ +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 372 VSEAKELIG 380
V A + G
Sbjct: 748 VERAITIFG 756
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 3/307 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD +S+ I+ L + + + E+ + + I + + + E A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-TYGIKPDLDTYNRVIKAF 191
F M L A+ +L+ K+ ++ + +E K I P TY V+K
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY--TYGTVVKGM 427
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S D AY+I+ EM +PN + L+ F + ++ D +VL+ M+ G+ +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I L K ++ EA++ L EM+ G+KPN+ TY FI G+ + F A K+ +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G+ PN + ++ CK G A + + +G + + T L+ GL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 372 VSEAKEL 378
V +A+E+
Sbjct: 608 VDDAEEI 614
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 27/347 (7%)
Query: 57 KILEICRA-AALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNER 111
K++E C A ++ + L D +++ +N L + + + + E++ + PD+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV---- 627
Query: 112 FHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
++ +++ G + + + A F EM E L +V +N LL + + ++ K +
Sbjct: 628 -FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E G+ P+ TY +I +C+S D + A+ + EM K + P++ + LV G +
Sbjct: 687 EM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR- 744
Query: 230 EKYEDVNKVLQMM--ERYGMKSGVSMYNVRIHSLCKLRKCAEAKA-----LLDEMLSKGM 282
DV + + + + G S + +N I+ + K K E K L+D +
Sbjct: 745 --LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK-TELKTEVLNRLMDGSFDRFG 801
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KPN VTY+ I CK+GN E AK+ + M N+ L P Y +++ K G
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
E+IA G P+ ++ ++A + LV + F KN
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA---LVLVDQMFAKN 905
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P TY+ +I C+ A S+L EMD + + ++ L+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M +G+ MY+ I + K +AKAL D M++ G+ P + Y+ I G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ N + + M + + Y T+V MC GD + A KE IA G PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ S+ +A ++ +KE+ ++ +N + GL +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP+ TYN +I C+ + +A + +M ++ P ++ +L+ G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-----GMKPNSVTYSHF 292
V G++ MY+V I++ K +A L+D+M +K G K + T
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ GF K G E A+K M P+S+ ++ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 2/277 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ AV EM + + V +N +L E R+F E + PD T+
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR-NVMPDTVTF 309
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ C+ S A + M K +PNA ++ AL+ G+ + ++ KVL +M
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G +S YN+ I+ CK ++ EAK LL EM K + P++VTYS + G C+ G E
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A ++ M +SGL P+ Y ++ CK G + AL KE + PN L+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G+ A K+ AKEL L + ++ T+N + GL
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV +M + ++ FN L+ L KE +F E + G +P++ +YN
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS-GHEPNVISYN 205
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI C++ ++ A + +M++ KPN ++ ++ K+ + + L M
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR 265
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ V YN +H C L + EA L EM+ + + P++VT++ + G CK+G EA
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M+ G PN+ Y ++ C + A+ I KG PN ++ L+ G
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILING 385
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+ +++EAK L+ + EK T + T++ + GL Q
Sbjct: 386 YCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQ 423
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 139/331 (41%), Gaps = 8/331 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++ I+ L + N ++L E+ R PD+ H GQ N A R
Sbjct: 237 VTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN---EATRL 293
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FKEM + FN L+ L E R E G +P+ TYN ++ +C
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNALMDGYC 352
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L M K PN SS+ L+ G+ K ++ + ++L M +
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ + LC++ + EA L EM S G+ P+ + YS + GFCK G+ +EA K + M
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM 472
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ PN +Y ++ M G E A + A G P+ T ++ GL
Sbjct: 473 HERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLS 532
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
EA E + + F + ++N I G Q
Sbjct: 533 DEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQ 563
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +F M R SV F L ++ K Y + + +G+ ++ + N
Sbjct: 78 DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM-DLFGVTHNVYSLNV 136
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C S A S++ +M + I+P+A +F L+ G E K ++ + M G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I+ LCK A + +M KPN VTY+ I CKD EA
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F M + G+ P+ Y T+++ C G A KE + + +P+ T LV GL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
VSEA+ + + EK + N T+N + G
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDG 350
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F EM +V ++N ++ L + RVF + + G KP++ TYN +I
Sbjct: 185 AVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG-KPNVVTYNTII 243
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGM 247
+ C+ + A L+EM + I P+ ++ ++ GF + + ++ +M+ R M
Sbjct: 244 DSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 303
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V+ +N+ + LCK +EA+ + + M KG +PN+ TY+ + G+C +EA K
Sbjct: 304 PDTVT-FNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIK 362
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
IM G +PN S Y ++ CK A E K P+ T +L+ GL
Sbjct: 363 VLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLC 422
Query: 368 GASKVSEAKELIGLVKE 384
+V +E + L KE
Sbjct: 423 ---QVGRPREALNLFKE 436
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N + A++ M ++ ++N L+ +K E KR+ E + + P
Sbjct: 351 YCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK-NLTP 409
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY+ +++ C+ A ++ EM + P+ ++ L+ GF K ++ K+L
Sbjct: 410 DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLL 469
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M +K + +Y + I + K AK L ++ + G++P+ TY+ I G K+
Sbjct: 470 KEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKE 529
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA +F+R M + G P+S Y ++ + D TA+ E + K + + +T
Sbjct: 530 GLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589
Query: 360 KSLV 363
+ L+
Sbjct: 590 QMLL 593
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 2/269 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + V + A++ A A + + +V E G++P+ TY +I FC
Sbjct: 270 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGN-GVEPNERTYGVLINGFC 328
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +A +LA+M + + N F ++ G+ ++ +D K+ ME+ G++ +
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN LC++ + EAK LL M+ G+ PN VTY+ I CKDG+ EA++ +R M
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G +P+ Y M+ K G A F KE KG+VP+ T SLV G KV
Sbjct: 449 AEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 508
Query: 373 SEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
A +L +K++ T+ NV + + +GL
Sbjct: 509 DVALKLFEEMKQRGTEPNVVAYTALISGL 537
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 11/275 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ C + P + + IN + L +++ + N+
Sbjct: 303 KVLDECVGNGVEPNER----TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 358
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK---RVFIEFPK 173
I Y + M + A++ M++ + + +N L L E K + IE
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM-- 416
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ P+ TY +I C+ D A + EM K P+ ++ ++ G+ K+
Sbjct: 417 --GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + ME+ G V Y +H C K A L +EM +G +PN V Y+ I
Sbjct: 475 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALI 534
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G K+G E A + Y M +GL P+ S+Y +V
Sbjct: 535 SGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 130/289 (44%), Gaps = 4/289 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
A S+++ G ++ + A R +M H + + +N+LL KD V+ + +E
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEI-LEI 237
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ GI+ + TY ++ + + D S ++ EM ++ + + A++ + +
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
KVL G++ Y V I+ CK+ + A+ LL +M +G+ N + ++
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G+C+ G ++A K M G+ + Y T+ +C+ + A I G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
VPN+ T +L++ + EA+ L + EK T +V T+N + G
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG 466
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ C+S A +L +M R + NA + +L+ + +++ V ++L++ME G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+++ V Y + + SL R ++ +AL +EM + + + Y+ I +C+ GN A
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K +G+ PN Y ++ CK G E A + +G N +++ G
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 367 AGASKVSEAKELIGLVKEKFTKNVD--TWNEIEAGL 400
V +A + I EK +D T+N + GL
Sbjct: 363 CRKGMVDDALK-IKAAMEKMGVELDIYTYNTLACGL 397
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TYN + C + A ++L M + PN ++ L++ K+ +
Sbjct: 382 GVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEA 441
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M G V YNV I K EA+ EM KG P+ TY+ ++G
Sbjct: 442 RRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHG 501
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G + A K + M G PN Y ++ + K G E A + + G +P+
Sbjct: 502 HCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPD 561
Query: 356 FTTMKSLVTGL 366
+ +LV L
Sbjct: 562 DSLYSALVGSL 572
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N LL L K ++ V+ E GIKPD+ T+N ++KA C + +A +L E
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 114
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + + P+ ++F L+ GF +E E +V M G + NV I+ CKL +
Sbjct: 115 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 174
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A + + ++ G +P+ +TY+ F+ G C++ + A K +M G P+ Y
Sbjct: 175 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 234
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
+V +CK G E A G + + +G +P+ TT +L+ L +++ EA +L V K
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294
Query: 386 FTKNVDTWN 394
+ +V T+N
Sbjct: 295 VSPDVYTFN 303
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 1/281 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++I +N L + L ++ R L + I N E A+
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+++ + V FN L+ AL D R+F E K G PD TYN +I C
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCS 346
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M+ + ++ ++ G K+ + E+ +V M+ G+
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I LCK +K +A L+++M+S+G++PN++TY+ + +CK G+ ++A M+
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 466
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+G + Y T++ +CK G + AL + KG P
Sbjct: 467 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 7/309 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D++ ++ +N L + ++ + ++ + PD+ + + GQ E A
Sbjct: 193 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ---LEEAK 249
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M + + FN L+ AL +E + + G+ PD+ T+N +I A
Sbjct: 250 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILINA 308
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ D A + EM P+ ++ L+ K +L+ ME G
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I LCK + EA+ + D+M +G+ N++T++ I G CKD ++A +
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL PN+ Y +++ CK GD + A + A G+ + T +L+ GL A
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Query: 371 KVSEAKELI 379
+ A +++
Sbjct: 489 RTQVALKVL 497
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ + L A+ LEE+ +R +E + + + E A+R
Sbjct: 88 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 147
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M E + N L+ Y ++ RV +I+ G +PD TYN +
Sbjct: 148 ARMLEMGCSATKVTVNVLI------NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 201
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A ++ M ++ P+ ++ +V K + E+ +L M G
Sbjct: 202 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
++ +N I +LC + EA L ++ KG+ P+ T++ I CK G+ A +
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M NSG +P+ Y T++ +C G AL K+ + G + T +++ GL
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381
Query: 369 ASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
++ EA+E+ + + ++N T+N + GL
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 414
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E+ L++ R + S D F+I IN L + + + EE+K +E +
Sbjct: 281 EEALDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I A+ K+M+ S +N ++ L +E + VF +
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQ 398
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI + T+N +I C+ A+ ++ +M + ++PN ++ +++ + K+ +
Sbjct: 399 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 458
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G + V Y I+ LCK + A +L M KGM+P Y+ +
Sbjct: 459 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 518
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YETALGFCKESIAKGWVP 354
+ N +A +R M+ G P++ Y + +C+GG + A F E + KG++P
Sbjct: 519 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 578
Query: 355 NFTTMKSLVTGL 366
F++ + L GL
Sbjct: 579 EFSSFRMLAEGL 590
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVL-QMMERYGMKSGVSMYNVRIHS 260
++AEM R+ + + + + ++ ++D V+ +L Q+ +G+++ +YN ++
Sbjct: 4 LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
L + K +++ EM ++G+KP+ VT++ + C+ A MS+ G++P+
Sbjct: 64 LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123
Query: 321 SSVYFT-----------------------------------MVYFMCKGGDYETALGFCK 345
+ + T ++ CK G E ALG+ +
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ IA G+ P+ T + V GL V A +++ +V+E +V T+N
Sbjct: 184 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 11/310 (3%)
Query: 74 DRLAFSIAINKLSEANYFN-GISQYLEELKTR--PDLQNERFHAHSIILYGQANM--TEH 128
D AF++ ++ L F ++ Y + LK PD+ + I+++G T+
Sbjct: 162 DLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV-----TYGILIHGLCKTCKTQD 216
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F EM + + + ++ +L L AK + +R+F + + G DL TYN ++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM-RASGCNRDLITYNVLL 275
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+S A+++L + + +G L+ G ++ +YE+ + Q M R +K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +Y + I L + + EA LL EM +G++P+++ Y+ I GFC G +EA+
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+S PN+ Y ++ MCK G A KE G +P+ T SL+ GL
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455
Query: 369 ASKVSEAKEL 378
A+++ EA+ L
Sbjct: 456 ANRLEEARLL 465
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 29/348 (8%)
Query: 67 LTPESH-LDRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYG- 121
LT + H L + + IN L A + + +++ +PD+ ++I++ G
Sbjct: 294 LTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM-----LYTIMIRGL 348
Query: 122 -QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
Q A+ EM E LR +NAL+ E + + +E K + P+
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISK-HDCFPN 407
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY+ +I C++ + A I EM++ P+ +F +L+ G K + E+ +
Sbjct: 408 NHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFY 467
Query: 241 MMERYGMKS-------------GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
ME S ++ V + LC+ +A LL +++ G+ P+
Sbjct: 468 QMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIR 527
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I GFCK GN A K ++ M G P+S Y T++ + + G E AL ++
Sbjct: 528 TYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNE 395
+ KG VP +T K+++T + +S A V K+ ++ W +
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALS----VWMKYLRDFRGWED 631
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 137/327 (41%), Gaps = 28/327 (8%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGA 147
S YL++ T L + H +I YG +A E A +++M ++ V
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVML 340
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ ++ L+ E + E + G++PD YN +IK FC+ A S+ E+
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTER-GLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ PN ++ L+ G K + + ME+ G V +N I+ LCK +
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459
Query: 268 AEAKALLDEM-----------LSKGMKP--NSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
EA+ L +M LS+G + + + C+ G +A K + +
Sbjct: 460 EEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVD 519
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
SG+ P+ Y ++ CK G+ A KE KG +P+ T +L+ GL A + +
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579
Query: 375 AKELI------GLVKEKFT-KNVDTWN 394
A E+ G V E T K + TW+
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIMTWS 606
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 123/263 (46%), Gaps = 3/263 (1%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA-KDYKEVKRVFIEFPKTYGIKPDLD 182
N E + +E+ ++ S AF+ L+ A + A D K V+ + + KPDL
Sbjct: 107 NAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVES--FSLMRDFDCKPDLF 164
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+N ++ A ++ +M + ++ P+ ++G L+ G K K +D + M
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ +Y++ + LC+ +K +A+ L +M + G + +TY+ + GFCK G
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL 284
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A ++++ G Y ++ + + YE A + ++ + + P+ +
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344
Query: 363 VTGLAGASKVSEAKELIGLVKEK 385
+ GL+ +V+EA L+G + E+
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTER 367
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 1/231 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K IK + ++ +I+A+ E+ A + M KP+ +F ++ ++E +
Sbjct: 120 KNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAF 179
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V M + + V Y + IH LCK K +A L DEM +G+ PN + YS
Sbjct: 180 LLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIV 239
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G C+ +A++ + M SG + + Y ++ CK G + A + G
Sbjct: 240 LSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGH 299
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+ L+ GL A + EA +++E +V + + GL Q
Sbjct: 300 ILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ KE +E KVLQ ++ +K ++V I + + +A M
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KP+ ++ ++ + F A Y M L+P+ Y +++ +CK + AL
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E +G +PN +++GL A K+ +A+ L
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 139/265 (52%), Gaps = 4/265 (1%)
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
H+ R + ++ L+ AL + + + + + G++PD+ TY +I+ C+++D
Sbjct: 107 HETRPTAVSYTTLMRALCAERRTGQAVGLLRDM-QASGVRPDVVTYGTLIRGLCDAADVD 165
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A +L EM I+PN + L+ G+ K ++E V+KV + M G++ V MY I
Sbjct: 166 KAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLI 225
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
SLC+ K +A ++D+M+ +G++PN VTY+ I CK+G+ +EA M G++
Sbjct: 226 DSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVA 285
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV--PNFTTMKSLVTGLAGASKVSEAK 376
++ Y T++ + + + A+G +E I + PN T S++ GL ++ +A
Sbjct: 286 LDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAF 345
Query: 377 ELIGLVKEKFTK-NVDTWNEIEAGL 400
++ ++ E N+ T+N + GL
Sbjct: 346 QVRDMMAENGCACNLVTFNLLIGGL 370
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D +YN V+ A C A L + +P A S+ L+ E + +L
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ G++ V Y I LC +A LL EM G++PN V YS + G+CK
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +E K + MS G+ P+ +Y ++ +C+ G + A + + +G PN T
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
L+ + V EA L + EK + T+N + GL
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 4/280 (1%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAV 130
LD + ++ I LS + LEE+ + + +++G + A
Sbjct: 286 LDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAF 345
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ M E+ ++ FN L+ L K+ + E + G++PD TY+ +I
Sbjct: 346 QVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS-GLEPDSFTYSILING 404
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC+ A S+L++M R I+P + L+A ++ E M + K
Sbjct: 405 FCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLD 463
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y+ IH C+LR A+ L ML +G+ P+SVTYS I F G+ A++ +
Sbjct: 464 VVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLK 523
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
M+ SG P+ +V+ +++ GD E L +E AK
Sbjct: 524 QMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S + +A + +S+ EE+ R PD+ S+ G+ + A +
Sbjct: 184 VVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK---VKKATQV 240
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M E L +V +N L+ ++ KE + + G+ D TYN +I
Sbjct: 241 MDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK-GVALDAVTYNTLITGLS 299
Query: 193 ESSDSSSAYSILAEM--DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ A +L EM ++PN +F +++ G K + +V MM G
Sbjct: 300 GVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACN 359
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +N+ I L ++ K +A L+DEM S G++P+S TYS I GFCK + A+
Sbjct: 360 LVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLS 419
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
M G+ P Y ++ +C+ G E A F E
Sbjct: 420 KMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 40/292 (13%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T AV ++M +R V + L+ L A D + + E ++ GI+P++ Y+
Sbjct: 129 TGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCES-GIEPNVVVYS 187
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMER 244
+++ +C++ + EM + I+P+ + L+ +E K + +V+ +MMER
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM---------------------- 282
G++ V YNV I+S+CK EA +L + ML KG+
Sbjct: 248 -GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Query: 283 ---------------KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+PN VT++ I+G CK G +A + +M+ +G + N + +
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + + + A+ E + G P+ T L+ G +V A+ L+
Sbjct: 367 IGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 119 LYGQANMTEHAVRTFKEM--DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
L G M E A+ +EM E + +V FN+++ L ++ +V + G
Sbjct: 298 LSGVLEMDE-AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR-DMMAENG 355
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+L T+N +I A ++ EM ++P++ ++ L+ GF K + +
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L M R G++ + Y + +LC+ +A+ DEM K K + V YS I+G
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGA 474
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ + + A++F + M + GL P+S Y ++ GD A K+ A G+VP+
Sbjct: 475 CRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDV 534
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
SL+ G + ELI
Sbjct: 535 AVFDSLIKGYGAKGDTEKVLELI 557
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 16/333 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LY--GQANMTEHAVR 131
+ F+ I+ L +++ Q +++ + L ++ ++I L+ G+A E +
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD 525
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ D + AFN + L+ D +V+ + + PD T+N +I
Sbjct: 526 AMPDPDTY-------AFNCCINGLSKLGDVSRALQVYNRMLELE-LVPDKVTFNILIAGA 577
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ + A ++ EM K+++P+ +FGAL+ G K + E +L +M G+ V
Sbjct: 578 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 637
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN +H LCK + EA L+EM+S G P+S+TY +Y C+ ++A +
Sbjct: 638 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 697
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + G P++ Y +V + K G E A+ +E + KG P+ T +L+ L A
Sbjct: 698 LKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD 757
Query: 372 VSEAKELIGLVKEKFTK----NVDTWNEIEAGL 400
+ EA+ L G + + ++ NV T++ + GL
Sbjct: 758 LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 157/365 (43%), Gaps = 46/365 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D++ F+I I +A F S EE+ + +LQ + ++I +A E A
Sbjct: 566 DKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDI 624
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M + +V +NAL+ L + +E + F+E + G PD TY ++ A C
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ-FLEEMVSSGCVPDSITYGSLVYALC 683
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + A +++E+ P+ ++ LV G +K + E VL+ M G V
Sbjct: 684 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEM---LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YN I SLCK EA+ L +M +S+ PN VTYS I G CK G +EA++
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 310 R-------------IMSNSGL--------------------------SPNSSVYFTMVYF 330
+ I NS L SP++ + T++
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKN 389
+CK G + A + IA G+VPN T L+ GL K+ A +I +V + T +
Sbjct: 864 LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923
Query: 390 VDTWN 394
V T++
Sbjct: 924 VITYS 928
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 5/255 (1%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +N +L +L A + +F G+ P + TYN +I C+S++ + +
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
E+ + P+ ++ L+ K E+ ++ M V Y+V I+ LCK+
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 265 RKCAEAKALLDEMLSKGMK--PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL--SPN 320
+ EA+ L+ EM K PN +TY+ F+ G CK EA + R + + L SP+
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI- 379
+ + T++ +CK G + A + IA G+VPN T +LV GL A K+ A +I
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419
Query: 380 GLVKEKFTKNVDTWN 394
+V + T +V T++
Sbjct: 420 SMVDKGVTPDVITYS 434
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 153/362 (42%), Gaps = 38/362 (10%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +S+ IN L + + + ++E+ + ++ L G + +MT A
Sbjct: 287 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 346
Query: 134 KEMDEHKLRHS--VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + + LR S F+ L+ L E VF + G P++ TYN ++
Sbjct: 347 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM-IAGGYVPNVITYNALVNGL 405
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A++++ M K + P+ ++ LV F K + ++ ++L M G V
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 465
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+N I LCK + EA + D+M L G+ P+ +TY I G + G +A+
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD 525
Query: 311 IMSN----------SGLS---------------------PNSSVYFTMVYFMCKGGDYET 339
M + +GLS P+ + ++ CK G++E
Sbjct: 526 AMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQ 585
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEA 398
A +E +AK P+ T +L+ GL A +V A++++ L+ NV T+N +
Sbjct: 586 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVH 645
Query: 399 GL 400
GL
Sbjct: 646 GL 647
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 34/337 (10%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +S+ IN L + + + ++E+ + ++ L G + +M A
Sbjct: 781 VTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM 840
Query: 134 KEMDEHKLRHS--VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + + LR S F+ L+ L E VF + G P++ TYN ++
Sbjct: 841 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM-IAGGYVPNVVTYNVLMNGL 899
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A++++ M K + P+ ++ LV F K ++ ++L M G V
Sbjct: 900 CKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNV 959
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+N I LCK + EA + D+M L G+ P+ +TY I G + G +A+
Sbjct: 960 VTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLD 1019
Query: 311 IMSN----------SGLS------------------PNSSVYFTMVYFMCKGGDYETALG 342
M + +GLS P+ + ++ CK G++E A
Sbjct: 1020 AMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASA 1079
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+E +AK P+ T +L+ GL A +V +++
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 10/228 (4%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD T++ +I C+ + A ++ +M PN ++ L+ G K +K E +
Sbjct: 850 VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAH 909
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ M G+ V Y+V + + CK EA LL M S+G PN VT++ I G
Sbjct: 910 AMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGL 969
Query: 297 CKDGNFEEAKKFYRIMS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-P 354
CK EA + + M+ GL+P+ Y T++ G + T E + P
Sbjct: 970 CKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI-----DGLFRTGWAGQAEVLLDAMPDP 1024
Query: 355 NFTTMKSLVTGLAGASKVSEAKEL---IGLVKEKFTKNVDTWNEIEAG 399
+ + GL+ VS A + LV +K T N+ +AG
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAG 1072
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N LL L +D +V E P +GI PD+ TY V+ A+C D A + ++
Sbjct: 209 NILLKGLVGVRDLDAALKVLDEMPG-WGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDII 267
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
P+ + + L+ G+ + K +D +++ ME G++ Y+V I + CK K A
Sbjct: 268 AGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSA 327
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA L+ EML G P++ + + C+DG EEA + +R M + P++++ T++
Sbjct: 328 EACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLI 387
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFT 387
Y++CK G A E + KG+ P+ T SL++GL ++ EA ++ +V+ ++
Sbjct: 388 YWLCKSGMVREARKLFDE-LEKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYE 446
Query: 388 KNVDTWNEIEAG 399
N T+ + G
Sbjct: 447 PNAMTYEALIKG 458
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 131/270 (48%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R F + SV +FNALL +L A+ + +F P I PDL + N ++K
Sbjct: 155 RLFLSLPSFNSHPSVRSFNALLHSLVAARRLRLAAALFRAAPTKLYITPDLVSCNILLKG 214
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
D +A +L EM I P+ ++ +++ + +E + K+ + G
Sbjct: 215 LVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPD 274
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V+MY V I C+ K +A ++DEM + G++PN VTYS I CK+G EA R
Sbjct: 275 VTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMR 334
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M +G +P++ + +V MC+ G E A + + K P+ T +L+ L +
Sbjct: 335 EMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSG 394
Query: 371 KVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
V EA++L +++ + ++ T+N + +GL
Sbjct: 395 MVREARKLFDELEKGYKPSLLTYNSLISGL 424
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
++ R+ E + G++P+ TY+ VI+A C+ S+ A +++ EM P+
Sbjct: 292 QDAARIMDEM-EAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAK 350
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+V ++ K E+ +++ + M + + ++ N I+ LCK EA+ L DE L KG
Sbjct: 351 VVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREARKLFDE-LEKG 409
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KP+ +TY+ I G C++G +EA K + M PN+ Y ++ CK G +
Sbjct: 410 YKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKPDEGA 469
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLA 367
E + KG P+ + LV L+
Sbjct: 470 AVFTEMVTKGCAPSKVLYQVLVDSLS 495
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 11/310 (3%)
Query: 74 DRLAFSIAINKLSEANYFN-GISQYLEELKTR--PDLQNERFHAHSIILYGQANM--TEH 128
D AF++ ++ L F ++ Y + LK PD+ + I+++G T+
Sbjct: 162 DLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV-----TYGILIHGLCKTCKTQD 216
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F EM + + + ++ +L L AK + +R+F + + G DL TYN ++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM-RASGCNRDLITYNVLL 275
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+S A+++L + + +G L+ G ++ +YE+ + Q M R +K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +Y + I L + + EA LL EM +G++P+++ Y+ I GFC G +EA+
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+S PN+ Y ++ MCK G A KE G +P+ T SL+ GL
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455
Query: 369 ASKVSEAKEL 378
A+++ EA+ L
Sbjct: 456 ANRLEEARLL 465
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 29/348 (8%)
Query: 67 LTPESH-LDRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYG- 121
LT + H L + + IN L A + + +++ +PD+ ++I++ G
Sbjct: 294 LTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM-----LYTIMIRGL 348
Query: 122 -QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
Q A+ EM E LR +NAL+ E + + +E K + P+
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISK-HDCFPN 407
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY+ +I C++ + A I EM++ P+ +F +L+ G K + E+ +
Sbjct: 408 NHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFY 467
Query: 241 MMERYGMKS-------------GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
ME S ++ V + LC+ +A LL +++ G+ P+
Sbjct: 468 QMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIR 527
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I GFCK GN A K ++ M G P+S Y T++ + + G E AL ++
Sbjct: 528 TYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNE 395
+ KG VP +T K+++T + +S A V K+ ++ W +
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALS----VWMKYLRDFRGWED 631
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 137/327 (41%), Gaps = 28/327 (8%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGA 147
S YL++ T L + H +I YG +A E A +++M ++ V
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVML 340
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ ++ L+ E + E + G++PD YN +IK FC+ A S+ E+
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTER-GLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ PN ++ L+ G K + + ME+ G V +N I+ LCK +
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459
Query: 268 AEAKALLDEM-----------LSKGMKP--NSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
EA+ L +M LS+G + + + C+ G +A K + +
Sbjct: 460 EEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVD 519
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
SG+ P+ Y ++ CK G+ A KE KG +P+ T +L+ GL A + +
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579
Query: 375 AKELI------GLVKEKFT-KNVDTWN 394
A E+ G V E T K + TW+
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIMTWS 606
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 123/263 (46%), Gaps = 3/263 (1%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA-KDYKEVKRVFIEFPKTYGIKPDLD 182
N E + +E+ ++ S AF+ L+ A + A D K V+ + + KPDL
Sbjct: 107 NAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVES--FGLMRDFDCKPDLF 164
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+N ++ A ++ +M + ++ P+ ++G L+ G K K +D + M
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ +Y++ + LC+ +K +A+ L +M + G + +TY+ + GFCK G
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL 284
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A ++++ G Y ++ + + YE A + ++ + + P+ +
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344
Query: 363 VTGLAGASKVSEAKELIGLVKEK 385
+ GL+ +V+EA L+G + E+
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTER 367
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K IK + ++ +I+A+ E+ A M KP+ +F ++ ++E +
Sbjct: 120 KNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAF 179
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V M + + V Y + IH LCK K +A L DEM +G+ PN + YS
Sbjct: 180 LLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIV 239
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G C+ +A++ + M SG + + Y ++ CK G + A + G
Sbjct: 240 LSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGH 299
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+ L+ GL A + EA +++E +V + + GL Q
Sbjct: 300 ILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ KE +E KVLQ ++ +K ++V I + + +A M
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KP+ ++ ++ + F A Y M L+P+ Y +++ +CK + AL
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E +G +PN +++GL A K+ +A+ L
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 183/409 (44%), Gaps = 54/409 (13%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGI 94
PL K T ++K + +P K LE+ + + I KL F +
Sbjct: 4 PLLPKHVT----AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59
Query: 95 SQYLEELKTRPDLQN---ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+ L ++ R ++ N E + ++ YG+ + AV F+ MD + +V ++NA+
Sbjct: 60 EEVLVDM--RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ L + + + +V++ + GI PD+ ++ +K+FC++S +A +L M +
Sbjct: 118 MSVLVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 212 IKPNASSFGALVAGFYKE----EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ N ++ +V GFY+E E YE K+L G+ +S +N + LCK
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS----GVSLCLSTFNKLLRVLCKKGDV 232
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFI---------------------------------- 293
E + LLD+++ +G+ PN TY+ FI
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 294 -YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
YG CK+ F+EA+ + M N GL P+S Y T++ CKGG + A +++ G+
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
VP+ T +SL+ GL + + A L K K NV +N + GL
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 116 SIILY-----GQAN--MTEHAVRTFKEMDEHKLRHSVGAFNAL---LLALTIAKDYKEVK 165
++ILY G +N M A + EM E L V FN L L + D +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+V I + G PD+ T+N +I + +A IL M + P+ ++ +L+ G
Sbjct: 450 KVMI----SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K K+EDV + + M G + +N+ + SLC+ RK EA LL+EM +K + P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 286 SVTYSHFIYGFCKDG------------------------------------NFEEAKKFY 309
+VT+ I GFCK+G N A+K +
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ M + L P+ Y MV CK G+ F E + G++P+ TT+ ++ L
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 370 SKVSEAKELI------GLVKEKFTKNVDT 392
+V EA +I GLV E D
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAVNTICDV 714
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ L T+N++++ C+ D +L ++ ++ + PN ++ + G + + +
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ + G K V YN I+ LCK K EA+ L +M+++G++P+S TY+ I G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G + A++ +G P+ Y +++ +C G+ AL E++ KG PN
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+L+ GL+ + EA +L + EK V T+N + GL
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 22/320 (6%)
Query: 47 TLLKSESNPEKILEICRAA------ALTPESHLDRLAFSIAINKLSEANYF---NGISQY 97
TL+K SN ILE + A L PE F+I +N L + +G+ +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ----TFNILVNGLCKMGCVSDADGLVKV 451
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ PD+ +I+++G + E+A+ M ++ + V +N+LL L
Sbjct: 452 MISKGYFPDI-----FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+++V + + G P+L T+N ++++ C A +L EM KS+ P+
Sbjct: 507 CKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
A +FG L+ GF K + + + ME Y + S YN+ IH+ + A+ L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
EM+ + + P+ TY + GFCK GN KF M +G P+ + ++ +C
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 335 GDYETALGFCKESIAKGWVP 354
A G + KG VP
Sbjct: 686 DRVYEAAGIIHRMVQKGLVP 705
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 41/374 (10%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R +TP+ + +F+I + + + + + L + ++ N + + + +
Sbjct: 138 RDRGITPDVY----SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N F +M + + FN LL L D KE +++ + K G+ P+L
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVLPNLF 252
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN I+ C+ + A ++ + + KP+ ++ L+ G K K+++ L M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 243 ERYGMKSGVSMYNVRIHSLCK--LRKCAE------------------------------- 269
G++ YN I CK + + AE
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 270 --AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A AL +E L KG+KPN + Y+ I G G EA + MS GL P + +
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-F 386
V +CK G A G K I+KG+ P+ T L+ G + K+ A E++ ++ +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 387 TKNVDTWNEIEAGL 400
+V T+N + GL
Sbjct: 493 DPDVYTYNSLLNGL 506
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C +++ A ++ E K IKPN + L+ G + +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ V +N+ ++ LCK+ ++A L+ M+SKG P+ T++ I+G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ E A + +M ++G+ P+ Y +++ +CK +E + K + KG PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
T L+ L K+ EA +GL++E K+V+
Sbjct: 531 LFTFNILLESLCRYRKLDEA---LGLLEEMKNKSVN 563
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIKP++ YN +IK A + EM K + P +F LV G K D
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ++++M G + +N+ IH K A +LD ML G+ P+ TY+ + G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK FE+ + Y+ M G +PN + ++ +C+ + ALG +E K P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKE--KFTKNVDTWNEI 396
T +L+ G + A L ++E K + + T+N I
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 13/245 (5%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY---LEELKT 103
T LK E N +IL++ + P+ + ++ +N L + + F + + + E
Sbjct: 473 TQLKME-NALEILDVMLDNGVDPDVY----TYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
P+L S+ Y + + A+ +EM + F L+ D
Sbjct: 528 APNLFTFNILLESLCRYRK---LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F + + Y + TYN +I AF E + + A + EM + + P+ ++ +V
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 224 AGFYKEEKYEDVNK-VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
GF K K +L+MME + S ++ V I+ LC + EA ++ M+ KG+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV-INCLCVEDRVYEAAGIIHRMVQKGL 703
Query: 283 KPNSV 287
P +V
Sbjct: 704 VPEAV 708
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F EM L +N L+ + D + + E K + P TY+ +I
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM-KARKLTPSPFTYSVLI 458
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C SSD A +L +M R +KPN +G L+ + +E +YE ++L++M G+
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I LC+ +K EAK LL +M KG+KPN+ TY FI + K G + A+++
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M +SG+ PN+ +Y ++ C G+ AL K + KG +P+ +++ L+
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638
Query: 369 ASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
K EA + + +K +V +N + +G
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 160/344 (46%), Gaps = 19/344 (5%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++L+I A + P D ++ I L A L ++ + N +
Sbjct: 507 ELLKIMIANGVLP----DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF 562
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY- 175
I LY ++ + A R FK+M S G ++ + K + +V +E T+
Sbjct: 563 INLYSKSGEIQVAERYFKDM------LSSGIVPNNVIYTILIKGHCDVGNT-VEALSTFK 615
Query: 176 -----GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G+ PD+ Y+ +I + ++ + A + + + + P+ + +L++GF KE
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E +++ M G+ + +YN I+ LCKL + +A+ L DE+ K + P+ VTYS
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYS 735
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+CK GN EA K + M + G+SP+ +Y ++ K G+ E AL E+ K
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 795
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
V + + SL+ KV EA+EL +V +K T N+ T+
Sbjct: 796 S-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG------IKPDLDTYNRVIKAFCESSDS 197
S G F L+ + +D + + + F K YG I PD+ TY VIKA C+ D
Sbjct: 200 SEGFFPTLICCNNLMRDLLKANMMGL-FWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+L+EM+ K KPN ++ A + G + ++ +V ++M G+ Y +
Sbjct: 259 IKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ CK ++ EAK + + M S G+ PN TY+ I GF K+GN EEA + M GL
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGL 377
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
N Y M+ + K G+ A+ E + G P+ T L+ G + +++A E
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437
Query: 378 LIGLVK-EKFTKNVDTWNEIEAGL 400
L+ +K K T + T++ + +GL
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGL 461
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 10/338 (2%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A L P D +++ I+ +++ + L E+K R L F +S+++ G +
Sbjct: 410 AGLEP----DTWTYNLLIDGYLKSHDMAKACELLAEMKARK-LTPSPF-TYSVLISGLCH 463
Query: 125 MT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ + A +M + ++ +V + L+ A Y E+ ++ G+ PDL
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY-EMAIELLKIMIANGVLPDLF 522
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
YN +I C + A +L +M K IKPNA ++GA + + K + + + + M
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM 582
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ +Y + I C + EA + ML KG+ P+ YS I+ K+G
Sbjct: 583 LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA + +G+ P+ +Y +++ CK GD E A E + G PN +L
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ GL +V++A+EL ++EK +V T++ I G
Sbjct: 703 INGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDG 740
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 39/261 (14%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
EVK++ +E G+ PD TY ++ FC+ S A I M + PN ++ AL
Sbjct: 297 EVKKLMME----KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF KE E+ ++ M G+K V YN I + K + A+A +L +EML G+
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412
Query: 283 KPNS-----------------------------------VTYSHFIYGFCKDGNFEEAKK 307
+P++ TYS I G C + ++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M +G+ PN +Y T++ + YE A+ K IA G +P+ L+ GL
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 368 GASKVSEAKELIGLVKEKFTK 388
A KV EAK L+ + EK K
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIK 553
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A F +M + KL ++ + L+ A A+ +E +++F++ +T I P+ TY +
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-ETRNIIPNTLTYTSL 876
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ ++ + + S+ +M+ + I +A ++G + + + KE K + K+L G+
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
K +++ I LCK ++ + LL EM + + +S T + + GF K GN +EA K
Sbjct: 937 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996
Query: 308 FYRIMSNSGLSPNS 321
+M G P S
Sbjct: 997 VLGVMQRLGWVPTS 1010
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 3/246 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ E A+ F E + K S+ AFN+L+ + E + +F + + P+
Sbjct: 777 GKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK-KLTPN 834
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY +I A+ ++ A + +M+ ++I PN ++ +L+ + + + + +
Sbjct: 835 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 894
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME G+ Y V + CK K EA LL++ L +G+K + I+ CK+
Sbjct: 895 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 954
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP-NFTTM 359
+ M LS +S T++ K G+ + A GWVP + +
Sbjct: 955 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014
Query: 360 KSLVTG 365
S+ TG
Sbjct: 1015 DSISTG 1020
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 87/203 (42%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
L +N +I +FC+ A + +M K + PN ++ L+ + K E E+ ++
Sbjct: 800 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 859
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME + Y + S ++ + +L +M ++G+ +++ Y +CK+G
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EA K G+ V+ +++ +CK T L E + + T
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Query: 361 SLVTGLAGASKVSEAKELIGLVK 383
+L+ G + EA +++G+++
Sbjct: 980 TLLLGFYKSGNEDEASKVLGVMQ 1002
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---TYGIKPDLDTYN 185
A+ F+EM + + S+ FN LL A+ K Y V I K GI+ DL T+N
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYD----VVISLGKKMEVLGIRNDLYTFN 124
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI FC S A S+L +M + +P+ + G+LV GF + + D ++ M
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + + YN I SLCK R+ +A E+ KG++PN VTY+ + G C G + +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ R M ++PN Y ++ K G A +E + P+ T SL+ G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 366 LAGASKVSEAKELIGLVKEK 385
L ++ EA ++ L+ K
Sbjct: 305 LCLHDRIDEANQMFDLMVSK 324
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 1/248 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + N AV +M E R + A+NA++ +L + + F E + GI+P
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK-GIRP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY ++ C S + A +L +M ++ I PN ++ AL+ F K K + ++
Sbjct: 224 NVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + + Y+ I+ LC + EA + D M+SKG P+ V+Y+ I GFCK
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKA 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K +R MS GL N+ Y T++ + GD + A F + + G P+ T
Sbjct: 344 KRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTY 403
Query: 360 KSLVTGLA 367
L+ GL
Sbjct: 404 NILLGGLC 411
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ YN +I + C++ + A E+ RK I+PN ++ ALV G ++ D
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ M + + V Y+ + + K K EAK + +EM+ + P+ VTYS I G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +EA + + +M + G P+ Y T++ CK E + ++ +G V N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTW--NEIEAGL 400
T +L+ G V +A+E + + F + D W N + GL
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQM-DSFGVSPDIWTYNILLGGL 410
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 9/298 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAV 130
D +A++ I+ L + N + +E+ RP++ + + G+ N A
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN---DAA 245
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R ++M + K+ +V ++ALL A E K +F E + I PD+ TY+ +I
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR-MSIDPDIVTYSSLING 304
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C A + M K P+ S+ L+ GF K ++ ED K+ + M + G+ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN I ++ +A+ +M S G+ P+ TY+ + G C +G E+A +
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
M S + + Y T++ MCK G E A G FC S+ KG P+ T ++++GL
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSL-KGLKPDIVTYTTMMSGLC 481
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 126/317 (39%), Gaps = 44/317 (13%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ +N L + +N ++ L ++ R N ++ + + + A F+E
Sbjct: 226 VTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEE 285
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +++L+ L + E ++F + + G PD+ +YN +I FC++
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCFPDVVSYNTLINGFCKAK 344
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +M ++ + N ++ L+ GF++ + + M+ +G+ + YN
Sbjct: 345 RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404
Query: 256 VR-----------------------------------IHSLCKLRKCAEAKALLDEMLSK 280
+ I +CK K +A L + K
Sbjct: 405 ILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK 464
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG-GDYET 339
G+KP+ VTY+ + G C G E + Y M GL N S+ +C G GD
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSM-------LCLGDGDITI 517
Query: 340 ALGFCKESIAKGWVPNF 356
+ K+ ++ G+ P+
Sbjct: 518 SAELIKKMLSCGYAPSL 534
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 11/327 (3%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFK 134
+++ I L ++ + + LEE++ PD F H++ +A T A+ F+
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALC---KARNTAKALDYFR 118
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
M+ K +V + ++ L A E F + K G P+ TYN +I FC+
Sbjct: 119 SMECEK---NVITWTIMIDGLCKANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKV 174
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
AY +L EM + PN ++ ++ GF ++ K + K+ + M G + Y
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N + LC+ EA LLDEM +G++P+ +Y + G CK G + A K + SN
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
P+ Y T++ +CK G + A ++ P+ T +L+ GL ++ E
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354
Query: 375 AKELIGLVKEK-FTKNVDTWNEIEAGL 400
A++++ ++++ T NV T++ + GL
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGL 381
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 1/306 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ ++ L + + Q LE ++ R N ++ I + A F
Sbjct: 335 DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 394
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K M + +V +N+L+ + + E T G PD+ TYN +I C+
Sbjct: 395 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT-GCLPDIITYNTLIDGLCK 453
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A + +M K P+ ++ L+ GF K E+ + + M + + V
Sbjct: 454 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 513
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
++ + C +A+ LL+EM++ P+ TY+ + GFCK G EA++ + M+
Sbjct: 514 FSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 573
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G PN Y ++ C+ G A +E + G PN T +SL+ G G +
Sbjct: 574 KRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 633
Query: 374 EAKELI 379
EA++++
Sbjct: 634 EARKIL 639
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 37/366 (10%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
E + + ++I I+ L +AN + Y ++K + + NE + I + + + A
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
KEM E L +V ++ ++ ++F + + G P+L TYN ++
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLS 239
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK-------YED-------- 234
C + AY +L EM + ++P+ S+ L+AG K K +ED
Sbjct: 240 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 299
Query: 235 --------------------VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
K+ + M + V + + LCK + EA+ +L
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+ M + PN +TYS I G CK G +A++ ++ M G+ PN Y ++++ C
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTW 393
++AL +E A G +P+ T +L+ GL + EA L G +K KF +V T+
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479
Query: 394 NEIEAG 399
+ + G
Sbjct: 480 SCLIGG 485
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ + A EM E L+ +++ L+ L +VF E PD+ Y
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF-EDNSNGDCPPDVVAY 304
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ +I C++ A + +M S +P+ +F AL+ G K ++ ++ +VL+ ME
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
V Y+ I LCK + +A+ + M+ +G++PN VTY+ I+GFC +
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M+ +G P+ Y T++ +CK G A + AK P+ T L+
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
G ++ A+ L ++K+ +V T++ + G
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 111/273 (40%), Gaps = 43/273 (15%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
R F K G ++ TYNR+ +A + IL I PN ++ ++ G
Sbjct: 9 RFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQG 68
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA----------------- 268
K + ++L+ M G ++YN IH+LCK R A
Sbjct: 69 LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVIT 128
Query: 269 ---------------EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
EA +M KG PN TY+ I GFCK A + M
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SGL+PN Y T+++ C+ +TA ++ + G +PN T +L++GL +
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248
Query: 374 EAKELI------GLVKEKFTKNVDTWNEIEAGL 400
EA EL+ GL +KF +++ + AGL
Sbjct: 249 EAYELLDEMRERGLQPDKF-----SYDTLMAGL 276
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + A R +EM V + +L+ E +RV K G +P
Sbjct: 521 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR-GCQP 579
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY +I AFC + + AY +L EM ++PN ++ +L+ GF E+ K+L
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL 639
Query: 240 QMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ +ER K+ + Y V + LC+ + + A LL+ + G P Y I G C+
Sbjct: 640 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 699
Query: 299 DGNFEEAKKFYRIMSNSGLS-PNSSVYFTMVYFMCKGGDYETA 340
+A + M+ S S PN+ Y ++ + + G +E A
Sbjct: 700 GKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 9/328 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVRTF 133
+A++ + A + + + E+ PD + +++I L G+ T +A+
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVEPD----AYTYNTLIRGLCGRGR-TANALAVL 55
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + V + LL A YK+ ++ E + G PD+ TYN V+ C+
Sbjct: 56 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQ 114
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A L + +PN S+ ++ G E++ED +++ M + G V
Sbjct: 115 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ I LC+ A +L+++ G PNS++Y+ ++ FCK ++A F +M
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G P+ Y T++ +C+ G+ + A+ + KG P + +++ GL A K
Sbjct: 235 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 294
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + ++ T++ I AGL
Sbjct: 295 EALELLNEMVSKGLQPDIITYSTIAAGL 322
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 154/325 (47%), Gaps = 9/325 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L+ L + N +++
Sbjct: 88 KLLDEMRDKGCTP----DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT--VSYN 141
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+L G A E A EM + +V FN L+ L + V + PK
Sbjct: 142 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK- 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P+ +YN ++ AFC+ A + L M + P+ S+ L+ + + +
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L ++ G + YN I L K K EA LL+EM+SKG++P+ +TYS
Sbjct: 261 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 320
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C++ E+A + + + + G+ PN+ +Y ++ +CK + +A+ I G +P
Sbjct: 321 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 380
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N +T L+ GLA + EA++L+
Sbjct: 381 NESTYTILIEGLAYEGLIKEARDLL 405
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ EM + + +N ++ + + P +YG +P+ +YN
Sbjct: 84 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNI 142
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+K C + A ++ EM +K PN +F L++ ++ E +VL+ + +YG
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
YN +H+ CK +K +A A LD M+S+G P+ V+Y+ + C+ G + A
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + G +P Y T++ + K G + AL E ++KG P+ T ++ GL
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ +A G V++ + N +N I GL
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 1/155 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV ++ + + ++N ++ LT A KE + E + G++PD+ TY+
Sbjct: 258 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM-VSKGLQPDIITYS 316
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+ C A ++ I+PN + A++ G K + + M
Sbjct: 317 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 376
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
G S Y + I L EA+ LLDE+ S+
Sbjct: 377 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 4/294 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
++L+++ TR N + I + N E A + + + V FN+L+ L
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ ++++ +F E ++ G +PD TYN +I + C A ++L +M+ +
Sbjct: 411 CLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ GF K K + ++ ME +G+ YN I LCK R+ +A L+D
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+M+ +G KP+ TY+ + FC+ G+ ++A + M+++G P+ Y T++ +CK G
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
E A + KG ++ GL K +EA I L +E +N
Sbjct: 590 RVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEA---INLFREMLEQN 640
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE--H 128
D+ F+ +N L +A + + ++ + PD+ + ++ ++ G + E
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV-----YTYNSVISGLCKLGEVKE 348
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
AV +M + +N L+ L ++ E+ RV + GI PD+ T+N
Sbjct: 349 AVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILPDVCTFN 404
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C + + A + EM K +P+ ++ L+ + K ++ +L+ ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I CK K EA+ + DEM G+ NSVTY+ I G CK E+A
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M G P+ Y +++ C+GGD + A + + G P+ T +L++G
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 366 LAGASKVSEAKELIGLVKEK 385
L A +V A +L+ ++ K
Sbjct: 585 LCKAGRVEVASKLLRSIQMK 604
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 154/354 (43%), Gaps = 3/354 (0%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
L + N K++EI A D F++ I L A+ LE++ + +
Sbjct: 163 LLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP 222
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+E+ + Y + + A+R ++M E S + N ++ ++
Sbjct: 223 DEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E G PD T+N ++ C++ A I+ M ++ P+ ++ ++++G K
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 229 -EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
E E V + QM+ R + V+ YN I +LCK + EA L + SKG+ P+
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVT-YNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I G C N A + + M + G P+ Y ++ +C G + AL K+
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
G + T +L+ G A+K+ EA+E+ ++ ++N T+N + GL
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 175 YGIKPDLDTYNR-----------------------------------VIKAFCESSDSSS 199
+G+KPD YNR +IKA C +
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A +L +M + P+ +F ++ G+ +E + ++ + M +G NV +H
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 260 SLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
CK + +A + EM ++ G P+ T++ + G CK G+ + A + +M G
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y +++ +CK G+ + A+ F + I + PN T +L++ L ++V EA EL
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 379 IGLVKEK-FTKNVDTWNEIEAGL 400
++ K +V T+N + GL
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGL 410
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 3/261 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ K+M+ SV +N L+ A +E + +F E + +G+ + TYN
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM-EVHGVSRNSVTYNT 510
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+S A ++ +M + KP+ ++ +L+ F + + ++Q M G
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + Y I LCK + A LL + KG+ Y+ I G + EA
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630
Query: 307 KFYR-IMSNSGLSPNSSVYFTMVYFMCKGGD-YETALGFCKESIAKGWVPNFTTMKSLVT 364
+R ++ + +P++ Y + +C GG A+ F E + KG+VP F+++ L
Sbjct: 631 NLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 365 GLAGASKVSEAKELIGLVKEK 385
GL S +L+ +V +K
Sbjct: 691 GLLTLSMEETLVKLVNMVMQK 711
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 107/289 (37%), Gaps = 74/289 (25%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+++ + +D S+A + +K + P + + ++ + ++D+ K+L+ M+
Sbjct: 52 KLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN 111
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK------------------------ 280
G + G S + + I S + E ++ M+
Sbjct: 112 SGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLK 171
Query: 281 ------------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G+KP+ T++ I C+ A M + GL P+ + T++
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIM 231
Query: 329 YFMCKGGDYETAL-----------------------GFCKE-------------SIAKGW 352
+ GD + AL GFCKE S G+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
P+ T +LV GL A V A E++ +++E + +V T+N + +GL
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 26/315 (8%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--- 168
A S+++ G ++ + A R +M H + + +N+LL KD V+ +
Sbjct: 16 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 75
Query: 169 ----IEF----------PKTY------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
IE PK G++P+ TY +I FC+ +A +LA+M
Sbjct: 76 ENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 135
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ + N F ++ G+ ++ +D K+ ME+ G++ + YN LC++ +
Sbjct: 136 GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLD 195
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EAK LL M+ G+ PN VTY+ I CKDG+ EA++ +R M+ G +P+ Y M+
Sbjct: 196 EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMI 255
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ K G A F KE KG+VP+ T SLV G KV A +L +K++ T+
Sbjct: 256 HGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTE 315
Query: 389 -NVDTWNEIEAGLPQ 402
NV + + +GL +
Sbjct: 316 PNVVAYTALISGLAK 330
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TYN + C + A ++L M + PN ++ L++ K+ +
Sbjct: 173 GVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEA 232
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M G V YNV IH K EA+ EM KG P+ TY+ ++G
Sbjct: 233 RRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHG 292
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G + A K + M G PN Y ++ + K G E A + + G +P+
Sbjct: 293 HCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPD 352
Query: 356 FTTMKSLVTGL 366
+ +LV L
Sbjct: 353 DSLYSALVGSL 363
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 157/327 (48%), Gaps = 12/327 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANM--TEH 128
D + FS IN L + F ++ +E+ +P+L H ++ I+ G + T
Sbjct: 153 DAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNL-----HTYNTIIKGFCKIGKTTV 207
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV K+MD+ R + +N ++ L + E +F E K G++PD+ TY+ ++
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI-KGKGVRPDVFTYSILM 266
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A ++ EM +I P+ +F LV KE + ++++M G++
Sbjct: 267 HGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVE 326
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN ++ C K EA+ + D M++KG PN V+Y+ I G+CK +EA++
Sbjct: 327 PNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAREL 386
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ MS GL PN+ Y T++ +C+ G + A K+ A+G P+ T L+ L
Sbjct: 387 FDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCK 446
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWN 394
+ A L +++ K N+ T++
Sbjct: 447 LGYLDNALRLFRAMQDSCLKPNLVTYD 473
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T++ +I C + A EM +PN ++ ++ GF K K
Sbjct: 149 GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVA 208
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M++ G + + +YN I LCK R +EA + E+ KG++P+ TYS ++G
Sbjct: 209 VGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHG 268
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C EEA + M + + P+ + +V +CK G A G K I KG PN
Sbjct: 269 LCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPN 328
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+ T SL+ G +KV EA+ + ++ + NV ++N + G
Sbjct: 329 YATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV----KRVFIEFPKTYGIKPDLD 182
E A+ +F M + F+ LL AL K Y V KR+ + I+ D+
Sbjct: 66 EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRI-----ELLRIERDVF 120
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+N +I F A+S+L ++ + +P+A +F +L+ G E+K+ + M
Sbjct: 121 HFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM 180
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G + + YN I CK+ K A LL +M G +P+ V Y+ I G CKD
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EA + + G+ P+ Y +++ +C E A E ++ +P+ T L
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
V L +SEA+ +I ++ EK + N T+N + G
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 103 TRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALT---I 157
RPD+ +SI+++G N E A F EM + V FN L+ L +
Sbjct: 255 VRPDV-----FTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ + + ++ IE G++P+ TYN ++ +C + A + M K PN
Sbjct: 310 LSEAQGIIKIMIE----KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S+ L+ G+ K ++ ++ ++ M G+ YN I LC+ + EA+ L +M
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
++G P+ VT + + CK G + A + +R M +S L PN Y ++ M K G
Sbjct: 426 QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 1/210 (0%)
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C ++ A M K P F L++ + + Y V + + +E ++ V
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+N+ I+ +L++ A ++L +++ G +P++VT+S I G C + F A +F+
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M SG PN Y T++ CK G A+G K+ G P+ +++ GL
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 372 VSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
VSEA ++ +K K + +V T++ + GL
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 36/193 (18%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPD------------LQNERFHA---- 114
D + F+I ++KL + + GI + + E P+ LQN+ F A
Sbjct: 293 DVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF 352
Query: 115 --------------HSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
++I++ Y +A + A F EM L + +N L+ L A
Sbjct: 353 DAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ E + +F + + G PDL T ++ + C+ +A + M +KPN +
Sbjct: 413 GRHCEARELFKDM-QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVT 471
Query: 219 FGALVAGFYKEEK 231
+ L+ YK K
Sbjct: 472 YDILIRAMYKSGK 484
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AV+ +M + +NA++ +L E + + GI PD+ T+N
Sbjct: 360 EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI-ARLLTSKGILPDVCTFNS 418
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C SS+ SA + EM K +P+ ++ L+ K E+ +L+ ME G
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V +YN I CK ++ EA+ + DEM +G+ +SVTY+ I G CK E+A
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M GL P+ Y +++ CK GD + A + + G P+ T +L++GL
Sbjct: 539 QLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598
Query: 367 AGASKVSEAKELIGLVKEK 385
A +V A L+ ++ K
Sbjct: 599 CKAGRVQVASRLLRSIQMK 617
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 1/255 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A + + + V FN+L+ L ++ ++K +F E K G +PD T
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM-KGKGCRPDEFT 450
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I + C S A ++L EM+ N + L+ GF K ++ E+ ++ ME
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ YN I LCK ++ +A L+D+M+ +G++P+ TY+ + FCK G+ +
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIK 570
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M++SG +P+ Y T++ +CK G + A + KG V ++
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVI 630
Query: 364 TGLAGASKVSEAKEL 378
L ++ EA L
Sbjct: 631 QALFKRNRTHEAMRL 645
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 156/325 (48%), Gaps = 11/325 (3%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL----YGQANMTEHAVRTFKEM- 136
+ KL +A F + + LEE+K L F ++ YG+ + + V K M
Sbjct: 104 LRKLGKAGSFEYMRRVLEEMK----LSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVME 159
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
DE++++ +N LL L A K V+ + I+ D+ T+N +IKA C++
Sbjct: 160 DEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR-IRHDVSTFNILIKALCKAHQ 218
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A ++ EM + P+ ++F ++ G+ + + ++ + M YG NV
Sbjct: 219 VRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNV 278
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I+ CK + +A + + E +S+G +P+ TY+ + G CK G+ + A + M G
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L P+ Y +++ +CK G+ E A+ + +++ PN T ++++ L ++V EA
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398
Query: 377 ELIGLVKEK-FTKNVDTWNEIEAGL 400
E+ L+ K +V T+N + GL
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGL 423
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 161/372 (43%), Gaps = 50/372 (13%)
Query: 72 HLDRLAFSIAINKLSEANYFN---GISQYLE-ELKTRPDLQNERFHAHSIILYGQANMTE 127
DR F I + + ++ GI + +E E + +PD RF+ + + AN +
Sbjct: 129 EFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPD---TRFYNVLLNVLVDANKLK 185
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD------- 180
M ++RH V FN L+ AL A + + E P +YG+ PD
Sbjct: 186 LVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP-SYGLSPDETTFTTI 244
Query: 181 ---------LD-------------------TYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
LD T N +I FC+ A S + E +
Sbjct: 245 MQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGF 304
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ ++ LV G K + +V+ M G+ + YN I LCKL + EA
Sbjct: 305 RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVK 364
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+LD+M+S+ PN+VTY+ I CK+ +EA + R++++ G+ P+ + +++ +C
Sbjct: 365 ILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK----FTK 388
++++A+ +E KG P+ T L+ L + K+ EA + L+KE +
Sbjct: 425 LSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA---LNLLKEMELNGCAR 481
Query: 389 NVDTWNEIEAGL 400
NV +N + G
Sbjct: 482 NVVIYNTLIDGF 493
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN +I C+ + A IL +M + PNA ++ A+++ KE + ++
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ +++ G+ V +N I LC A L +EM KG +P+ TY+ I
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C EEA + M +G + N +Y T++ CK E A E +G +
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
T +L+ GL + +V +A +L+ GL +KFT N
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYN 557
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 2/350 (0%)
Query: 52 ESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER 111
++N K++E ++ + D F+I I L +A+ +EE+ + +E
Sbjct: 180 DANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDET 239
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+ Y + + A+R ++M E+ + N L+ + FI+
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS-FIQE 298
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G +PD TYN ++ C+ + A ++ M + P+ ++ +L++G K +
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E+ K+L M YN I SLCK + EA + + SKG+ P+ T++
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G C N + A + M G P+ Y ++ +C E AL KE G
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
N +L+ G ++ EA+E+ ++ + +++ T+N + GL
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 528
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 37/293 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+EM R +N L+ +L ++ +E + E + G ++ YN +I
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM-ELNGCARNVVIYNTLI 490
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ A I EM+ + + ++ ++ L+ G K ++ ED +++ M G++
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + CK +A ++ M S G P+ VTY+ I G CK G + A +
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610
Query: 309 YRIMSNSGL----------------------------------SPNSSVYFTMVYF-MCK 333
R + G+ P ++ + +VY +C
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCN 670
Query: 334 -GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
GG A+ F E I +G +P F++ L GL S +L+ ++ EK
Sbjct: 671 GGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEK 723
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 5/271 (1%)
Query: 136 MDEHKLRHSVG---AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+DE K ++ G + A++ A A + + VF E GI+P+ TY +I FC
Sbjct: 225 VDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGN-GIEPNERTYGVLINGFC 283
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +A +LA+M + + N F ++ G+ ++ ++ KV ME+ G++ V
Sbjct: 284 KIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVY 343
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN LC++ + AEAK LL M+ KG+ PN VTY+ I CK+G+ EA++ +R M
Sbjct: 344 TYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREM 403
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G P+ Y M+ K G A F KE KG VP+ T SLV G KV
Sbjct: 404 AGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKV 463
Query: 373 SEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
A +L +K + T+ NV + + +GL +
Sbjct: 464 DVALKLFEEMKHRGTEPNVVAYTALISGLAK 494
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+ + IN + L +++ R N+ I Y + M ++A++ M+
Sbjct: 275 YGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAME 334
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + V +N L L E K + G+ P+ TY +I C+ D
Sbjct: 335 KMGIELDVYTYNTLACGLCRVNRMAEAK-TLLHIMIEKGVPPNYVTYTTLISIHCKEGDM 393
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A + EM K P+ ++ ++ G+ K+ + + + ME+ G+ V Y
Sbjct: 394 VEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASL 453
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+H C K A L +EM +G +PN V Y+ I G K+G EEA + Y M +GL
Sbjct: 454 VHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGL 513
Query: 318 SPNSSVYFTMV 328
+P+ S+Y +V
Sbjct: 514 TPDDSLYSALV 524
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ FC+S A ++L EM R ++ NA + +L+ + + + V ++L++ME G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+++ V Y + + SL ++ +A++DEM +K + + Y+ I +C+ GN A
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG- 365
+ + +G+ PN Y ++ CK G E A + +G N +++ G
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317
Query: 366 -----LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ A KV A E +G+ +V T+N + GL
Sbjct: 318 CRQGMVDNALKVKAAMEKMGI-----ELDVYTYNTLACGL 352
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 1/293 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ IN A S+ +E NER + I + + E A
Sbjct: 236 DVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLL 295
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + H+ FN ++ +V K GI+ D+ TYN + C
Sbjct: 296 ADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKM-GIELDVYTYNTLACGLCR 354
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A ++L M K + PN ++ L++ KE + ++ + M G V
Sbjct: 355 VNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVT 414
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV + K EA+ EM KG+ P+ TY+ ++G C +G + A K + M
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ G PN Y ++ + K G E A + + G P+ + +LV L
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%)
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+V + CK + +A+ALLDEM G++ N++ Y+ + + + + ++ IM N
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ Y +V + GD E AK + +++ A V
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 375 AKEL 378
A E+
Sbjct: 256 ASEV 259
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 37/309 (11%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R EM L+ +V +NA++ + A + + +F E GI+PD TYN
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA-GIEPDTWTYNL 421
Query: 187 VIKAF-----------------------------------CESSDSSSAYSILAEMDRKS 211
+I + C SSD A +L +M R
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
+KPN +G L+ + +E +YE ++L++M G+ + YN I LC+ +K EAK
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
LL +M KG+KPN+ TY FI + K G + A+++++ M +SG+ PN+ +Y ++
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNV 390
C G+ AL K + KG +P+ +++ L+ K EA + + +K +V
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661
Query: 391 DTWNEIEAG 399
+N + +G
Sbjct: 662 FLYNSLISG 670
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 157/369 (42%), Gaps = 44/369 (11%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A LTP +S+ I+ L ++ ++ L+++ N + I Y Q
Sbjct: 443 KARKLTPSP----FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ E A+ K M + + + +N L++ L AK +E K + ++ + GIKP+
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK-GIKPNAH 557
Query: 183 TYNR-----------------------------------VIKAFCESSDSSSAYSILAEM 207
TY +IK C+ ++ A S M
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
K + P+ ++ A++ K K ++ V + G+ V +YN I CK
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFI--YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+A L DEML G+ PN V Y+ I YG+CK GN EA K + M + G+SP+ +Y
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 737
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKE 384
++ K G+ E AL E+ K V + + SL+ KV EA+EL +V +
Sbjct: 738 ILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 796
Query: 385 KFTKNVDTW 393
K T N+ T+
Sbjct: 797 KLTPNIVTY 805
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG------IKPDLDTYNRVIKAFCESSDS 197
S G F L+ + +D + + + F K YG I PD+ TY VIKA C+ D
Sbjct: 200 SEGFFPTLICCNNLMRDLLKANMMGL-FWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+L+EM+ K KPN ++ A + G + ++ +V ++M G+ Y +
Sbjct: 259 IKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ CK ++ EAK + + M S G+ PN TY+ I GF K+GN EEA + M GL
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGL 377
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
N Y M+ + K G+ A+ E + G P+ T L+ G + +++A E
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437
Query: 378 LIGLVK-EKFTKNVDTWNEIEAGL 400
L+ +K K T + T++ + +GL
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGL 461
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 39/261 (14%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
EVK++ +E G+ PD TY ++ FC+ S A I M + PN ++ AL
Sbjct: 297 EVKKLMME----KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF KE E+ ++ M G+K V YN I + K + A+A +L +EML G+
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412
Query: 283 KPNS-----------------------------------VTYSHFIYGFCKDGNFEEAKK 307
+P++ TYS I G C + ++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M +G+ PN +Y T++ + YE A+ K IA G +P+ L+ GL
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 368 GASKVSEAKELIGLVKEKFTK 388
A KV EAK L+ + EK K
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIK 553
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 160/363 (44%), Gaps = 44/363 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVR 131
D +++ I+ +++ + L E+K R L F +S+++ G + + + A
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARK-LTPSPF-TYSVLISGLCHSSDLQKANE 472
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+M + ++ +V + L+ A Y E+ ++ G+ PDL YN +I
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRY-EMAIELLKIMIANGVLPDLFCYNCLIIGL 531
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK-------EEKYEDV-------NK 237
C + A +L +M K IKPNA ++GA + + K E ++D+ N
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591
Query: 238 VLQ----------------------MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
V+ M+E+ G+ + Y+ IHSL K K EA +
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEK-GLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV--YFMCK 333
+ L G+ P+ Y+ I GFCK+G+ E+A + Y M ++G++PN VY T++ Y CK
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTW 393
G+ A E I+KG P+ L+ G + +A L ++K ++ +
Sbjct: 711 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 770
Query: 394 NEI 396
N +
Sbjct: 771 NSL 773
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A F +M + KL ++ + L+ A A+ +E +++F++ +T I P+ TY +
Sbjct: 785 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-ETRNIIPNTLTYTSL 843
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ ++ + + S+ +M+ + I +A ++G + + + KE K + K+L G+
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
K +++ I LCK ++ + LL EM + + +S T + + GF K GN +EA K
Sbjct: 904 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 963
Query: 308 FYRIMSNSGLSPNS 321
+M G P S
Sbjct: 964 VLGVMQRLGWVPTS 977
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 3/246 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ E A+ F E + K S+ AFN+L+ + E + +F + + P+
Sbjct: 744 GKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK-KLTPN 801
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY +I A+ ++ A + +M+ ++I PN ++ +L+ + + + + +
Sbjct: 802 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 861
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME G+ Y V + CK K EA LL++ L +G+K + I+ CK+
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 921
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP-NFTTM 359
+ M LS +S T++ K G+ + A GWVP + +
Sbjct: 922 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981
Query: 360 KSLVTG 365
S+ TG
Sbjct: 982 DSISTG 987
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 87/203 (42%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
L +N +I +FC+ A + +M K + PN ++ L+ + K E E+ ++
Sbjct: 767 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 826
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME + Y + S ++ + +L +M ++G+ +++ Y +CK+G
Sbjct: 827 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 886
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EA K G+ V+ +++ +CK T L E + + T
Sbjct: 887 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 946
Query: 361 SLVTGLAGASKVSEAKELIGLVK 383
+L+ G + EA +++G+++
Sbjct: 947 TLLLGFYKSGNEDEASKVLGVMQ 969
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
NK SEA + Q ++ +PDL + + G ++ A+ K+M++ K+
Sbjct: 202 NKASEAVAL--VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIE 255
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
V +N ++ L K + +F E GI+PD+ TY+ +I C S A
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L++M + I PN +F AL+ F KE K + K+ M + + + Y+ I+ C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ EAK + + M+SK PN VTYS I GFCK EE + +R MS GL N+
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y T+++ + D + A K+ ++ G PN T L+ GL K+++A
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ L + + + E+ RPD+ + YG+ + A
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---DAS 313
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R +M E K+ +V F+AL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLING 372
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K PN ++ L+ GF K ++ E+ ++ + M + G+
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y IH + R C A+ + +M+S G+ PN +TY+ + G CK+G +A +
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ S + P+ Y M+ MCK G E FC S+ KG PN ++++G
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KGVSPNVIAYNTMISGFCRK 551
Query: 370 SKVSEAKELIGLVKE 384
EA L+ +KE
Sbjct: 552 GSKEEADSLLKKMKE 566
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F +M + + S+ FN LL A+ ++ V + E +T GI DL TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG-EQMQTLGISHDLYTYS 122
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
I FC S S A ++LA+M + +P+ + +L+ G+ ++ D ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + IH L K +EA AL+D+M+ +G +P+ VTY + G CK G+ + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M + + +Y T++ +CK + AL E KG P+ T SL++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K NV T++ +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 131/290 (45%), Gaps = 1/290 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S I+ L ++ S+ L ++ R N + I + + A + +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + + +++L+ + E K +F E + P++ TY+ +IK FC+
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCK 410
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + EM ++ + N ++ L+ GF++ ++ V + M G+ +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LCK K A+A + + + M+P+ TY+ I G CK G E+ + + +S
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
G+SPN Y TM+ C+ G E A K+ G +PN T +L+
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V ++ L+ AK +E +F E + G+ + TY
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTT 438
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ D +A + +M + PN ++ L+ G K K V + ++R
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+ PN + Y+ I GFC+ G+ EEA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 617
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+ +I + +S A +++ +M ++ +P+ ++G +V G K +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME+ +++ V +YN I LCK + +A L EM +KG++P+ TYS I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A E I + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
T SL+ G ++ EAK + L+ K NV T++ + G
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
L + K +A L +M+ P+ V ++ + K FE M G+S +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y + C+ AL + + G+ P+ T+ SL+ G + ++S+A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
+V+ + + T+ + GL
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGL 198
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K I PD+ +YN +I C+ A +L EM+ S +PN+ ++ L+ G KE +
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ ++L M+R G++ V +Y+ I C KAL DEML KG+ PN V YS
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFCK G + EA M+ G+ P+ Y M+ +CK G AL KG
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
P+ T L+ GL + +A ++ + EK + V ++N + GL
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R +I P+ S+ ++ G KE++ E +L ME + Y + + LCK +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA LL EM KG++ + V YS I GFC G + K + M G+SPN VY
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
++ CK G + A +G P+ T ++ GL + +A +L L+ EK
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRV 187
A + F+ M E R V ++N L++ L E ++F + ++PD+ T+N V
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I+ C+ A I M + N + L+ + K + ++ + + + G+
Sbjct: 264 IQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGL 323
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y+V I CK+ AK L M G+ P Y+ + CK+ + E+A++
Sbjct: 324 VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARR 383
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
++ M S P++ + M+ K GD +A + G P+ T S + L+
Sbjct: 384 LFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLS 443
Query: 368 GASKVSEAK 376
++ EAK
Sbjct: 444 KLGQMEEAK 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 18/311 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D + F+ I L + + + + + R N F H +I Y ++ + + A+
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN-LFTCHILIGEYIKSGIIDKAMEL 314
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+K + + L S ++ ++ K +F K G+ P L YN ++ + C
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM-KISGLSPTLFDYNTLMASLC 373
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A + EM + +P+ SF ++ G K ++L M++ G+
Sbjct: 374 KESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAY 433
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ I+ L KL + EAK D M++ G+ P++ Y I GF + EE R M
Sbjct: 434 TYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++ G+ + + +++ F+C ++ + +PNF++ S G + +
Sbjct: 494 ADMGVILDLEITNSILTFLCNSAEHLHVMEL---------LPNFSSESS------GGTSI 538
Query: 373 SEAKELIGLVK 383
S K L+ + K
Sbjct: 539 SCDKLLMKIQK 549
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 115/312 (36%), Gaps = 46/312 (14%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-FIEFPKTYGIK 178
+ + + A M E ++ V + ++ L KD + K + + G +
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGL--CKDGRARKALDLFDLMTEKGEE 182
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P TYN +I C+ A+ I M K + S+ L+ G K ++ K+
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242
Query: 239 LQMMERYG--MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG--------------- 281
+ G ++ V +N I LCK + +A + D M+ +G
Sbjct: 243 FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEY 302
Query: 282 --------------------MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+ P+S TYS I GFCK AK + M SGLSP
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-- 379
Y T++ +CK E A +E P+ + ++ G A + AKEL+
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422
Query: 380 ----GLVKEKFT 387
GL + +T
Sbjct: 423 MQQMGLTPDAYT 434
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 47 TLLKSESNPEKILEICRAAALTPES-HLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
+LL+ ++ P+ L++ + P+ L++ + I KL + F+ + Q L +L+
Sbjct: 14 SLLRLQNGPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLR--- 70
Query: 106 DLQNERFHAHSIIL------YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
+ RF II YG+A + + A++TF+ + E + + +V + N+LL AL K
Sbjct: 71 --RETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLNCK 128
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
++++ + K P++ TYN +I A C S A+++ EM RK + PN +F
Sbjct: 129 EFEKFDGILSGIDKF--ATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTF 186
Query: 220 GALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
G L++G ++ + ++ +++ + M++ + +K +Y + LC++ + + A L EM+
Sbjct: 187 GTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMV 246
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ ++ +S YS I K G +E M +G P++ Y M+ C D+E
Sbjct: 247 ANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFE 306
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIE 397
A G +E + KG P+ + +++GL K EA +L + + T +V ++ +
Sbjct: 307 AAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILF 366
Query: 398 AGL 400
GL
Sbjct: 367 DGL 369
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 4/282 (1%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
F+GI +++ T P++ ++ L G+ A F EM + +V F
Sbjct: 133 FDGILSGIDKFAT-PNVCTYNILINACCLSGRLG---DAWNVFDEMLRKHVCPNVVTFGT 188
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L+ L E R+ + K + +KP+ Y ++K C ++ S A+ + EM
Sbjct: 189 LISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN 248
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++ ++ + L+A +K + ++V VL+ M G K YN I C + A
Sbjct: 249 KLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAA 308
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+L+EM+ KG KP+ ++Y+ I G CK+G + EA + M G +P+ Y +
Sbjct: 309 YGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDG 368
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+C+G + A E + KG+ P + V L ++
Sbjct: 369 LCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSGREL 410
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 119/265 (44%), Gaps = 39/265 (14%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K +G+ P L YN +I + C+ A S+ M K + PN ++ L+ F K K
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ L M G+K+ V Y+ I CKL K AK+L DEM++ G+KPN V Y+
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM--------------------- 331
I G+CK+G A + Y M+ G+SPN+ + ++ +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526
Query: 332 --------------CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
CK G+ A E + KG VP+ T + L++GL +VSEA+E
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586
Query: 378 LIGLVKEKFTKNVDTWNEIEAGLPQ 402
+ ++ + K NEIE LP
Sbjct: 587 FMNDLQGEQQK----LNEIEGCLPN 607
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYS 202
SV +N + L K+ + + V I+ +Y G++ D+ TY ++ C+ + +
Sbjct: 249 SVATYNVFIRGL--CKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEE 306
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
++ EM P+ ++ LV G K+ ++ ++++G+ + +YN I+S+C
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYS----------------HF-------------- 292
K K EA++L + M KG+ PN VTYS HF
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426
Query: 293 -----IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
I G CK G AK + M +GL PN +Y +++ CK G+ A E
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
KG PN T +L++GL A++++EA +L G +V+ N T+N + G
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 44/323 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + +A R + EM + + F AL+ L A E ++F E + + + P
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE-WNVIP 528
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +I+ C+ ++ A+ +L EM K + P+ ++ L++G + + + +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Query: 240 --------QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS------------ 279
++ E G V Y I+ LCK+ +A+ L EML+
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648
Query: 280 ----------------------KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+G N+VTY+ I GFCK G +EA + M +SG+
Sbjct: 649 FLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
SP+ Y T++Y C+ GD + A+ + + +G P+ L+ G ++++A E
Sbjct: 709 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 768
Query: 378 L-IGLVKEKFTKNVDTWNEIEAG 399
L +++ N T+N + G
Sbjct: 769 LRDDMMRRGVKPNRATYNSLIHG 791
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P++ TY +I C+ A + EM + PN +++ + E E
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE-- 660
Query: 236 NKVLQMMERY--GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
K +Q+ + G + YN+ I CKL + EA +L M+ G+ P+ ++YS I
Sbjct: 661 -KAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
Y +C+ G+ +EA K + M N G++P++ Y ++Y C G+ A + + +G
Sbjct: 720 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 779
Query: 354 PNFTTMKSLVTGLAGASKVSEAKE 377
PN T SL+ G S VS +
Sbjct: 780 PNRATYNSLIHGTCLMSSVSSTAD 803
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 5/245 (2%)
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
++R G N L+ + ++ +F E + G++PD+ Y V+++ CE D
Sbjct: 179 QIRTLSGVLNGLIRI----RQFRMALHLFDEIVSS-GLRPDVYVYTAVVRSLCELKDFIR 233
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A ++ M+ + +++ + G K ++ + ++ ++ G+++ V Y +
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LCK+ + + +++EM+ G P+ S+ + G K GN A + G++P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ VY ++ MCK G + A KG PN T L+ K+ A +
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 380 GLVKE 384
G + E
Sbjct: 414 GKMTE 418
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 19/274 (6%)
Query: 129 AVRTFKEMDEHK-LRHSVGAFNALLLALTIAKDYKEV--------------KRVFIEFPK 173
A+R F + HK HS +F L+ AL + Y + +F F
Sbjct: 76 ALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLD 135
Query: 174 TYGIKPDLDT---YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+Y K + T ++ +I+ + ++ ++ M I P + ++ G +
Sbjct: 136 SYR-KCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIR 194
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++ + + G++ V +Y + SLC+L+ A+ ++ M S G + TY+
Sbjct: 195 QFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYN 254
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
FI G CK+ EA + ++S GL + Y T+V +CK ++E E I
Sbjct: 255 VFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF 314
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G+VP+ + +LV GL + A +L+ VK+
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 1/228 (0%)
Query: 152 LLALTIAKDYKEVK-RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL T ++ +E+ V + GI P + T + V+ A + E+
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS 209
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++P+ + A+V + + + +V+ ME G V+ YNV I LCK ++ EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ + + KG++ + TY + G CK FE ++ M G P+ + +V
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ K G+ +A + G P+ +L+ + K+ EA+ L
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+++ I + + R+ + ++ M+ G+ P T S + G + F A + +
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+SGL P+ VY +V +C+ D+ A + G + T + GL +V
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 374 EAKELIGLVKEK-FTKNVDTWNEIEAGL 400
EA E+ L+ K +V T+ + GL
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGL 295
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 138/284 (48%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A + ++EM E + V + +++ A + + +F E GI P
Sbjct: 262 YASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMI-CRGIVP 320
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T+ +I C++ +A +L EM K + N F ++ G+ K ++ ++
Sbjct: 321 NTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQ 380
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MER G ++ V YN+ LCKL + EAK +L+ M+ KG+ PN VT + FI +C++
Sbjct: 381 DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQE 440
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN E ++F R + G+ PN Y T++ K + A E + KG +P+ T
Sbjct: 441 GNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTY 500
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
SL+ G KV EA +L ++ + NV T+ I +GL +
Sbjct: 501 TSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSK 544
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY 120
ICR + P + F I+ + +A LEE++ + N + Y
Sbjct: 314 ICRG--IVPNTX----TFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGY 367
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+ M + A R M+ V +N L L Y+E KRV + G+ P+
Sbjct: 368 CKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRV-LNVMVEKGVAPN 426
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ T I+ +C+ + + L ++++ + PN ++ L+ + K EK + + +
Sbjct: 427 VVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKA 486
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G+ V Y IH C + K EA L +EML KG++ N TY+ I G K+G
Sbjct: 487 EMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEG 546
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+EA K Y M GL P+ V+ +V
Sbjct: 547 RADEALKLYDEMMRMGLIPDDRVFEALV 574
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 4/266 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--FIEFPKTYGIKP 179
+ N E VR F+ M E R +G +L + + + EV R + G+ P
Sbjct: 158 KCNKVELCVRFFRRMVESG-RVDIGV-QSLTIVVDVLCRRGEVGRAKELMNEMAARGVVP 215
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN ++ A D IL M+R+ + + ++ L+ + E+ + KV
Sbjct: 216 TVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVY 275
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M ++ V +Y I C+ A AL DEM+ +G+ PN+ T+ I G CK
Sbjct: 276 EEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKA 335
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G E A+ M G+ N ++ TM+ CK G + A KG+ + T
Sbjct: 336 GQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTY 395
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
L +GL + EAK ++ ++ EK
Sbjct: 396 NILASGLCKLHRYEEAKRVLNVMVEK 421
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D+ TYN + C+ A +L M K + PN + + + +E +
Sbjct: 387 GFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEP 446
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L+ +E+ G+ + YN I + K K +A L EM+ KG+ P+ TY+ I+G
Sbjct: 447 ERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHG 506
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +EA K + M G+ N Y ++ + K G + AL E + G +P+
Sbjct: 507 ECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPD 566
Query: 356 FTTMKSLVTGL 366
++LV L
Sbjct: 567 DRVFEALVGSL 577
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP+ TYN +I C++ A +L M + I P+ + L++GF K
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M+R + Y IH LC+ K EA+ L EMLSKG+KP+ VTY+ I G
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G +EA + M GL+PN Y +V +CK G+ + A E KG PN
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T +L+ GL + +A +L+
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLM 520
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 107 LQNERFHAHSIIL------YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
++N+R +++ +G++ + F EM K+ + +++ L A
Sbjct: 348 MKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGK 407
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
E +++F E + G+KPD TY +I +C++ + A+S+ +M K + PN ++
Sbjct: 408 VVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
ALV G K + + N++L M G++ V YN I+ LCK+ +A L++EM
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G P+++TY+ + +CK G +A + RIM + GL P + ++ C G E
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586
Query: 341 LGFCKESIAKGWVPNFTTMKSLV 363
K + KG +PN TT SL+
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLM 609
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F+E E + + ++N +L L KE + I+ + G PD+ +Y+ ++
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQM-EFRGNVPDVVSYSVIV 294
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ ++ E+ RK +KPN ++ ++++ K + + +VL++M+ +
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y I K + L DEM K + P+ VTY+ I+G C+ G EA+K
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + GL P+ Y ++ CK G+ + A + + KG PN T +LV GL
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+V A EL+ + EK NV T+N + GL
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 10/328 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY----GQANMTEHA 129
D +++S+ ++ + + + +EEL+ R L+ ++ +SII + G+ E
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQ-RKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+R M ++ + L+ + + ++F E K I PD TY +I
Sbjct: 345 LRV---MKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM-KRKKIVPDFVTYTSMIH 400
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C++ A + +EM K +KP+ ++ AL+ G+ K + ++ + M G+
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V Y + LCK + A LL EM KG++PN TY+ I G CK GN E+A K
Sbjct: 461 NVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLM 520
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M +G P++ Y T++ CK G+ A + + KG P T L+ G +
Sbjct: 521 EEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMS 580
Query: 370 SKVSEAKELIGLVKEK-FTKNVDTWNEI 396
+ + + LI + +K N T+N +
Sbjct: 581 GMLEDGERLIKWMLDKGIMPNATTFNSL 608
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 164/351 (46%), Gaps = 16/351 (4%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERF 112
E++L + + + P D + ++ I+ ++ + + +E+K + PD F
Sbjct: 342 EQVLRVMKNQRIFP----DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPD-----F 392
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
++ +++G QA A + F EM L+ + AL+ A + KE + +
Sbjct: 393 VTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQ 452
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G+ P++ TY ++ C+ + A +L EM K ++PN ++ AL+ G K
Sbjct: 453 MVEK-GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E K+++ M+ G Y + + CK+ + A+A LL ML KG++P VT++
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFN 571
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ GFC G E+ ++ + M + G+ PN++ + +++ C + + K A+
Sbjct: 572 VLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQ 631
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G VP+ T L+ G A + EA L +V++ F+ ++N + G
Sbjct: 632 GVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
TE + T+K+ H L F+ L A E ++F + YG+ +D+ N
Sbjct: 167 TERLIYTYKDWGAHPL-----VFDVFFQVLVEAGLLLEAGKLFDKL-LNYGVLVSVDSCN 220
Query: 186 RVIKAFCESSDS-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ S D +A+ + E + N S+ ++ + K ++ + +L ME
Sbjct: 221 LFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEF 280
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V Y+V + C++ + + L++E+ KG+KPN TY+ I CK G E
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVE 340
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A++ R+M N + P++ VY T++ K G+ E K VP+F T S++
Sbjct: 341 AEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIH 400
Query: 365 GLAGASKVSEAKEL 378
GL A KV EA++L
Sbjct: 401 GLCQAGKVVEARKL 414
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ L +A + E+ ++ +E + I Y +A + A
Sbjct: 391 DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLH 450
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M E L +V + AL+ L + + E + G++P++ TYN +I C+
Sbjct: 451 NQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK-GLQPNVCTYNALINGLCK 509
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++ EMD P+ ++ ++ + K + +++L++M G++ +
Sbjct: 510 VGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT 569
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NV ++ C + + L+ ML KG+ PN+ T++ + +C N + Y+ M
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH 629
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G+ P+++ Y ++ CK + + A KE + KG+ + SL+ G K
Sbjct: 630 AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689
Query: 374 EAKELI------GLVKEK 385
EA++L G + EK
Sbjct: 690 EARKLFEEMRTHGFIAEK 707
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 19/236 (8%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY---------KEVKRVFIEFPKTYGI 177
E AV+ +EMD G F + TI Y E+ R+ ++ G+
Sbjct: 514 EQAVKLMEEMD------LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD----KGL 563
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P + T+N ++ FC S ++ M K I PNA++F +L+ + +
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ + M G+ + YN+ I CK R EA L EM+ KG + +Y+ I GF
Sbjct: 624 IYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFY 683
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
K FEEA+K + M G +Y V + G++E L C E+I K V
Sbjct: 684 KRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLV 739
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY +I+ C++S+ +A +L EM ++PN + L+ G+ + +++DV
Sbjct: 153 GVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDV 212
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV + M R G+K V M+ I LCK K +A + D M+ +G++PN VTY+ I
Sbjct: 213 GKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINS 272
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-- 353
CK+G+ EA + M + G++P+ Y T++ + + + A+ F +E I V
Sbjct: 273 LCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVE 332
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
P+ T S++ GL ++++A ++ ++ E+ N+ T+N + G
Sbjct: 333 PDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGG 379
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P+ +Y V++ C S + A ++L M ++ + ++G L+ G + + +
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M G++ V +Y+ + C+ + + + ++M +G+KP+ + ++ I C
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K+G +A K +M GL PN Y ++ +CK G AL KE KG P+
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFT---KNVDTWNEIEAGL 400
T +L+ GL+G ++ EA + + + T +V T+N + GL
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGL 345
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 119/300 (39%), Gaps = 38/300 (12%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T AV + M +R V + L+ L A + + E + G++P++ Y+
Sbjct: 139 TGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGS-GVQPNVVVYS 197
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ +C S + +M R+ IKP+ F L+ KE K KV MM +
Sbjct: 198 CLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR 257
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI------------ 293
G++ V YNV I+SLCK EA L EM KG+ P+ VTY+ I
Sbjct: 258 GLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA 317
Query: 294 -------------------------YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+G CK G +A K +M+ G N Y ++
Sbjct: 318 MSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLI 377
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ + A+ E G P+ T L+ G + +V A++ + ++++ K
Sbjct: 378 GGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK 437
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 145 VGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V FN+++ L I + + VK E G +L TYN +I F A ++
Sbjct: 335 VVTFNSVIHGLCKIGRMTQAVK--VREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNL 392
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+ E+ ++P++ ++ L+ GF K + + K L M + G+K+ + Y + ++C+
Sbjct: 393 MDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQ 452
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
A L +EM K +++ YS I+G CK G+ + K+ + M + GL+P++
Sbjct: 453 QGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVT 511
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y ++ K GD E A K+ A G+VP+ SL+ G S + +++ L+
Sbjct: 512 YSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGY---SAEGQTDKVLKLIH 568
Query: 384 EKFTKNV 390
E KNV
Sbjct: 569 EMRAKNV 575
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A + M + L +V +N L+ +L +E + E G+ PD+ TYN
Sbjct: 244 TGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDK-GVAPDVVTYN 302
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKS--IKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+I + A S L EM + ++P+ +F +++ G K + KV +MM
Sbjct: 303 TLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMA 362
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + YN I ++ K A L+DE+ G++P+S TYS I GF K +
Sbjct: 363 ERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVD 422
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A+KF M G+ Y ++ MC+ G E A+G E + K + +++
Sbjct: 423 RAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNE-MDKNCGLDAIAYSTMI 481
Query: 364 TGLAGASKVSEAKELI 379
G + + K+LI
Sbjct: 482 HGACKSGDMKTVKQLI 497
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++I++ Q A+ FKEM E + +V + L+ +L ++ + K++
Sbjct: 311 TYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM 370
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G+ P + TYN +I +C+ S+SA IL+ M+ + PNA ++ L+ GF + +
Sbjct: 371 LEK-GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+L M ++ V YN+ IH CK A LL M G+ P+ TYS
Sbjct: 430 IHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
FI CK G EEA+ + + G+ N +Y T++ CK G + ++ G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
VPN T SL+ G EA+ L+ ++K DT+
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 143/303 (47%), Gaps = 1/303 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++ I L E + F+ + L + + + + + I Y + ++ A+ M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + + +N L+L K+ + + + + ++P++ TYN +I C+ D
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLER-KLQPNVVTYNILIHGQCKEGD 464
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
SAY +L+ M+ + P+ ++ + K E+ + + ++ G+K+ +Y+
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYST 524
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I CK+ K ++ + LLD+MLS G PNS+TY+ I G+CK+ NF+EA+ IM
Sbjct: 525 LIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+ P + Y ++ + K +++ A + ++ G P+ + + ++ +A+
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644
Query: 377 ELI 379
LI
Sbjct: 645 VLI 647
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D TY +I +C + + +A +I M K N S+ L+ GF + + ++
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M V Y V I +LC+L + EA + EM K +PN TY+ I
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICS 353
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+D NF++AKK M GL P+ Y ++ CK G +AL + PN
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPN 413
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
T L+ G + +A L+ +++ K NV T+N + G
Sbjct: 414 ARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHG 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 121/267 (45%), Gaps = 2/267 (0%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ +D K + ++ +N LL+ L+ E+K V++E + P++ T N ++ +C+
Sbjct: 158 RRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDM-VTPNIFTLNTMVNGYCK 216
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++++ + + + ++ +L+ G+ + + + N + M G
Sbjct: 217 LGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVS 276
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y IH C+ R+ EA L +M P TY+ I+ C+ G EA ++ M+
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT 336
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PN Y ++ +C+ +++ A + KG +P+ T +L+ G +
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396
Query: 374 EAKELIGLVK-EKFTKNVDTWNEIEAG 399
A E++ L++ + N T+NE+ G
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILG 423
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++I+++GQ + A + M+E L ++ + L +E + +F E
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF-ES 509
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K GIK + Y+ +I +C+ S +L +M PN+ ++ +L+ G+ KE+
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+++ ++ +M + ++ Y + I +L K + +A + D+MLS G P+ Y+
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
FI+ +C G ++A+ M+ G+ P++ +Y + + G + A G K G
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689
Query: 352 WVPNFTTMKSLVTGLAGA 369
P++ T L+ L+ A
Sbjct: 690 CEPSYYTYSCLIKHLSNA 707
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 30/251 (11%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P+ TYN +I +C+ + A ++ M ++ I+P A ++ L+ K+++++
Sbjct: 549 GCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQA 608
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G V +Y IH+ C + +A+ L+ +M +KG+ P+++ Y+ FI
Sbjct: 609 HDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG-------------------- 335
+ + G+ + A + M G P+ Y ++ +
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASN 728
Query: 336 ---------DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
DYE L + G PN T +TGL + A L +KEK
Sbjct: 729 DFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKG 788
Query: 387 -TKNVDTWNEI 396
+ N D +N +
Sbjct: 789 QSPNEDIYNSL 799
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 30/255 (11%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ Y I A+C A ++ +M+ K I P+ + + + + +
Sbjct: 619 GSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSL----------------------------CKLRKC 267
+L+ M G + Y+ I L C R
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD 738
Query: 268 AE-AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
E L +M G PN+ TY FI G CK G E A + + M G SPN +Y +
Sbjct: 739 YEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNS 798
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
++ C+ G Y A+ + I +P+ + K L+ GL +AK + ++ +
Sbjct: 799 LLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCE 858
Query: 386 FTKNVDTWNEIEAGL 400
+ + W + GL
Sbjct: 859 YNYDEMVWKVLIDGL 873
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 235 VNKVLQMMER----YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
V ++L+ M R + K + YN+ + L + E K++ EML + PN T +
Sbjct: 149 VLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLN 208
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ G+CK GN EA+ + + +GLS ++ Y +++ C+ + + A K
Sbjct: 209 TMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNK 268
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G + N + +L+ G A +V EA +L + E
Sbjct: 269 GCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHE 302
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 93/245 (37%), Gaps = 11/245 (4%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
L+ SH D ++ I+ + ++ + + + + I YG+
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD--LDTY 184
+ A K M E S ++ L+ L+ AK KEV + G+ + + +
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP-KEVSSSSELSDLSSGVASNDFSNCW 734
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
RV D + +M PNA+++G + G K E +++ M+
Sbjct: 735 RRV--------DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKE 786
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G +YN + C+L EA LD M+ P+ + + G +GN E+
Sbjct: 787 KGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEK 846
Query: 305 AKKFY 309
AK+ +
Sbjct: 847 AKRVF 851
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 11/298 (3%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVRTFKEMDEHK 140
NK+ EA + + + E+ P++ + ++ ++ G + + A+R +++M
Sbjct: 231 NKIEEAE---SMHRAMREVGVYPNV-----YTYNTLMDGYCKLANAKQALRLYQDMLGEG 282
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L V F L+ L + K + +F+ K + + P++ YN +I A+C+ D S A
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK-FSVTPNIAVYNSLIDAYCKVGDVSEA 341
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
++ E++R + P+ ++ L+ G + E+ + + M + G+ + YN I
Sbjct: 342 MALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG 401
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
CK K +A + +M G++PN +T+S I G+CK N + A Y M LSP+
Sbjct: 402 CCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPD 461
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y M+ CK G + AL + + G PN T+ L+ GL K+S+A EL
Sbjct: 462 VVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALEL 519
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M + + ++ +N+L+ A D E +F+E + + + PD+ TY+ +I+ C
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER-FEVSPDVFTYSILIRGLC 368
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S + A +I +M ++ I N+ ++ +L+ G KE K + ++ M G++ V
Sbjct: 369 SVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVI 428
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
++ I CK+R A + EM+ K + P+ VTY+ I G CK G+ +EA K Y M
Sbjct: 429 TFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI----------AKGWVPNFT---TM 359
++G++PN ++ +CK G AL E I A G P+ T
Sbjct: 489 LDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAY 548
Query: 360 KSLVTGLAGASKVSEAKEL 378
+L+ GL + S+A +L
Sbjct: 549 TALIHGLCQDGQFSKAVKL 567
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 9/290 (3%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRH--SVGAFNALLLALTIAKDYKEVKRVFIE 170
+ II+ + + E A+ + HK+ ++ A N LL L ++ + R++ E
Sbjct: 118 YGELIIVLCKMELVEEALSMY-----HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEE 172
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G+ P + T+ +I C D A + EM K I P + L+ G +
Sbjct: 173 MISN-GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDN 231
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K E+ + + M G+ V YN + CKL +A L +ML +G+ P+ VT+
Sbjct: 232 KIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFG 291
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G + A+ + M ++PN +VY +++ CK GD A+ E
Sbjct: 292 ILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERF 351
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
P+ T L+ GL S+ EA + + KE N T+N + G
Sbjct: 352 EVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG 401
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 2/270 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R ++EM + L SV F L+ D + +F E + GI P + Y +I+
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEM-RVKGIVPTVIVYTILIRG 226
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + A S+ M + PN ++ L+ G+ K + ++ Q M G+
Sbjct: 227 LCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPD 286
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V + + I LCK + A+ L M+ + PN Y+ I +CK G+ EA +
Sbjct: 287 VVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFL 346
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ +SP+ Y ++ +C E A ++ +G + N T SL+ G
Sbjct: 347 ELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEG 406
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
K+ +A E+ + E + NV T++ + G
Sbjct: 407 KMDKALEICSQMTENGVEPNVITFSTLIDG 436
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
LE + PD+ +SI++ G ++ TE A F++M + + + +N+L+
Sbjct: 348 LERFEVSPDV-----FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG- 401
Query: 156 TIAKDYKEVKRVFIEFPKT-YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
K+ K K + I T G++P++ T++ +I +C+ + +A I +EM KS+ P
Sbjct: 402 -CCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSP 460
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+ ++ A++ G K ++ K+ M G+ + + LCK K ++A L
Sbjct: 461 DVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520
Query: 275 DEML----------SKGMKP---NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
E + + G KP N V Y+ I+G C+DG F +A K + M GL P+
Sbjct: 521 TEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDE 580
Query: 322 SVYFTMV 328
+Y M+
Sbjct: 581 VIYVVML 587
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 26/272 (9%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +SI I L + E++ L N + I + + A+
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEIC 415
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M E+ + +V F+ L+ ++ + ++ E + PD+ TY +I C+
Sbjct: 416 SQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEM-VIKSLSPDVVTYTAMIDGHCK 474
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-----VNKVLQMMERYGMK 248
A + ++M I PN + L+ G K+ K D K+ R +
Sbjct: 475 YGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVD 534
Query: 249 SGVS--------MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+G S Y IH LC+ + ++A L +M G++P+ V Y + G
Sbjct: 535 AGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL---- 590
Query: 301 NFEEAKKFYRIMSNS-----GLSPNSSVYFTM 327
F+ K+ +M ++ G+ PNS+V+ +
Sbjct: 591 -FQ--VKYILMMLHADMLKFGVIPNSAVHVIL 619
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A ++E+ ++ +V N ++ AL + + K F+ + G+ PD+ TYN
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFPDVVTYN 293
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A+C A+ ++ M K +KP ++ A++ G K KY VL M +
Sbjct: 294 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 353
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
GM + YN+ + C+ +A+ + DEM S+G+ P+ V++S I K+G ++A
Sbjct: 354 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 413
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K++R M N+GL+P++ +Y ++ C+ G AL E + +G V + T +++ G
Sbjct: 414 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 473
Query: 366 LAGASKVSEAKELIGLVKEK 385
L +SEA EL + E+
Sbjct: 474 LCKEKMLSEADELFTEMTER 493
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 140/359 (38%), Gaps = 37/359 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+I IN L + +L +++ + + + I Y + + E A M
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
L+ V +NA++ L Y K V E K G+ PD TYN ++ C + +
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI-GMSPDTATYNILLVECCRNDN 374
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVA-------------------------------- 224
A I EM + + P+ SF AL+
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434
Query: 225 ---GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
GF + + KV M G V YN ++ LCK + +EA L EM +G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P+ T++ I G+ KDGN +A + +M L P+ Y T++ CKG + E
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ I++ PN + L+ G VSEA L +V++ F + T N I G
Sbjct: 555 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 8/329 (2%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
+ E+I + + + P D ++FS I LS+ + +Y ++K + +
Sbjct: 377 DAERIFDEMPSQGVVP----DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 432
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + + + A++ EM E V +N +L L K E +F E +
Sbjct: 433 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 492
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ PD T+ +I + + + + A ++ M ++++KP+ ++ L+ GF K + E
Sbjct: 493 R-GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 551
Query: 234 DVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
VN++ M+ R + +S Y + I+ C + +EA L DEM+ KG + +T +
Sbjct: 552 KVNELWNDMISRRIYPNHIS-YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 610
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G+C+ GN +A +F M G+ P+ Y T++ K + + A + G
Sbjct: 611 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 670
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+P+ T ++ G + ++ EA ELI L
Sbjct: 671 LPDVITYNVILNGFSRQGRMQEA-ELIML 698
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ TYN ++ C+ S A + EM + + P+ +F L+ G+ K+
Sbjct: 459 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 518
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +MM + +K V YN I CK + + L ++M+S+ + PN ++Y I G
Sbjct: 519 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C G EA + + M G T+V C+ G+ A F + KG VP+
Sbjct: 579 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 638
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T +L+ G + A L+ GL+ + T NV
Sbjct: 639 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
F+ L+ A+ +E F K+ G+ ++ N ++ + A+ I E
Sbjct: 186 VFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ R ++ N + ++ K +K E+ L ME G+ V YN I++ C+
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L+D M KG+KP TY+ I G CK G + AK M G+SP+++ Y
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ C+ + A E ++G VP+ + +L+ L+ + +A
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 413
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK----------------PDLDTYN 185
+HS+ +F+A++ L ++ + + V + + G+ + ++
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 188
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ + ++ + K + + ++ +L+ G K + ++ Q + R
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V N+ I++LCK +K K+ L +M KG+ P+ VTY+ I +C+ G EEA
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ MS GL P Y ++ +CK G Y A G E + G P+ T L+
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 366 LAGASKVSEAKEL 378
+ +A+ +
Sbjct: 369 CCRNDNMMDAERI 381
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIIL 119
R L LD + ++ +N L + + + E+ R PD F+ + ++
Sbjct: 452 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD-----FYTFTTLI 506
Query: 120 YG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE------ 170
G NM + AV F+ M + L+ V +N L+ + ++V ++ +
Sbjct: 507 NGYSKDGNMNK-AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565
Query: 171 FPK--TYGI--------------------------KPDLDTYNRVIKAFCESSDSSSAYS 202
+P +YGI + + T N ++K +C + ++ A
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 625
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
L+ M K I P+ ++ L+ GF KEE + ++ ME G+ V YNV ++
Sbjct: 626 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 685
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ + EA+ ++ +M+ +G+ P+ TY+ I G N +EA + + M G P+
Sbjct: 686 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 18/235 (7%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-----------------IKPNASSFG 220
K L +++ +I S A +++ M RKS N F
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 188
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
LV + + K + + ++++ G+ ++ N + L K+ A + E++
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++ N T + I CK+ E K F M G+ P+ Y T++ C+ G E A
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
KG P T +++ GL K AK ++ ++K + + T+N
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
>gi|195640760|gb|ACG39848.1| hypothetical protein [Zea mays]
Length = 359
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 10/265 (3%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
A +ALL A + Y R F P GIKP L ++N ++KA S D ++A+++ E
Sbjct: 87 ALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLLKALVASGDVAAAHTLFDE 146
Query: 207 M-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM--ERYGMKSGVSMYNVRIHSLCK 263
M D ++P+ S ++ G+ + +++++ + + +K V YN+R+ LC
Sbjct: 147 MPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRRLKPNVGTYNLRMALLCS 206
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS------NSGL 317
+ EA+ LLD M + G+ PN +++ I G C +G A ++ M G+
Sbjct: 207 KMRSFEAEELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGAAMALFKRMPEVPRQHGKGV 266
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
SPN Y ++ + K ++ AL CKE + W P F +K LV GL + K A+E
Sbjct: 267 SPNFETYIMLLEALVKKNLFDPALEICKECLRNKWAPPFQAVKGLVQGLLKSRKAKHARE 326
Query: 378 LIGLVKEKFTKNV-DTWNEIEAGLP 401
+ +++ + W ++EA P
Sbjct: 327 VFMAMRKAVKGDAKQEWIKVEAQFP 351
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 144/325 (44%), Gaps = 7/325 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F + I++L N F LE +K + E YG+ + A+R F
Sbjct: 49 DHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVF 108
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--FIEFPKTYGIKPDLDTYNRVIKAF 191
+M+ +LR + A+ L L I + VKR F + GI + + N +IKA
Sbjct: 109 HKMEGFQLRPTQKAY---LTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKAL 165
Query: 192 CESSDS-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C++ ++ SA I EM + +P++ ++G L+ G + + ++ + ME+ G +
Sbjct: 166 CKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSAS 225
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y IH LC+ EA LL+EM ++PN TYS + G CK G+ +A +
Sbjct: 226 VVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLE 285
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+M PN Y T++ +CK A+ +G PN +++GL A
Sbjct: 286 VMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAG 345
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWN 394
EA I +V + N +W+
Sbjct: 346 SYQEAANFIDEMVLGGISPNRASWS 370
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+R F+EM + + L+ L + E K +F E + G + TY
Sbjct: 172 VDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK-GFSASVVTYT 230
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+S++ A +L EM R I+PN ++ +L+ G K ++L++M++
Sbjct: 231 SLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKK 290
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ Y+ I+ LCK RK EA +LD M +G+KPN+ Y I G C G+++EA
Sbjct: 291 HHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEA 350
Query: 306 KKFYRIMSNSGLSPNSS---------------------------VYFTM----------- 327
F M G+SPN + +Y +M
Sbjct: 351 ANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDT 410
Query: 328 ----VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLV 382
V CK GD A +E + G +P+ ++ GL KV EA E L+ +
Sbjct: 411 FDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVEL 470
Query: 383 KEKFTK 388
++KF +
Sbjct: 471 QQKFVE 476
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 14/293 (4%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIIL------YGQANMTEHAVRTFKEMDEHKLRHSVGA 147
+ + L++LK Q RF H +I YG+A++ + A + F+ + + + +V +
Sbjct: 1 MEEILQQLK-----QETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKS 55
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N+LL AL + +++ +VF++ YG PD T+N +I A C D + + + EM
Sbjct: 56 VNSLLAALLKNRQLEKMTQVFVDI-SNYG-SPDACTFNILIHAACLCGDLDAVWGVFDEM 113
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRK 266
++ +KPN +FG L+ G K ++ ++ + M++ Y +K S+Y I C + +
Sbjct: 114 QKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGE 173
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A L +EM++ +K S YS I K G EE R M +G P++ Y
Sbjct: 174 LNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNA 233
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ CK D E+A E + KG P+ + +++ L K+ +A +L+
Sbjct: 234 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLL 286
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 10/337 (2%)
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
C+ + S L L + + K+++ F IS Y PD H+ L G
Sbjct: 49 CKRTVKSVNSLLAALLKNRQLEKMTQV--FVDISNY-----GSPDACTFNILIHAACLCG 101
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ F EM + ++ +V F L+ L++ KE R+ + K Y IKP+
Sbjct: 102 DLDAVWG---VFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNA 158
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y +IK FC + + A+ + EM ++K ++ + L++ +K + E+V+ +L+
Sbjct: 159 SIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILRE 218
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G K YN I+ CK A ++DEM+ KG KP+ +++ I CK+G
Sbjct: 219 MGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGK 278
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A M G P+ Y + +C+ + A E I KG+VP ++
Sbjct: 279 LDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINK 338
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEA 398
LV L + ++ + N+D W + A
Sbjct: 339 LVDRLCQECNMELLWMILNSLGRGNRMNMDMWARVVA 375
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S+++ G +AN AV + M V + L+ L V E
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G P+L TYN ++ C + S A +++ +M + PN ++G L+ G K +
Sbjct: 254 DA-GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+D +L M G + +YN+ I+ LCK + E+ ALL +S G+KP+ VTYS
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
IYG C+ +EA + + + G P+ +Y T++ +CK G + A + G
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ T +L+ GL A +V EA L+ +V+ + T+N + GL
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 11/309 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV-- 130
+ +S+ I+ L +AN + + LE +K R PD+ ++I++ G ++ A
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT-----YTILVDGLCKESKVAAAW 246
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+EM + ++ +N+LL L A+ + + + G P++ TY +I
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLIDG 305
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A ++LA+M K P+ + L+ G K ++ ++ +L+ G+K
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y+ I+ LC+ + EA LL + S+G P+ + YS I G CK G +EA Y
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+M+ G + Y T++ +CK G + A + G P+ T SL+ GL +
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485
Query: 371 KVSEAKELI 379
+ EA EL+
Sbjct: 486 HLDEAIELV 494
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TY+ +I C+++ S A +L M + P+ ++ LV G KE K +V
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ M G + YN +H LC+ R+ ++A AL+ +M +G PN VTY I G CK
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G ++A M + G +P+ +Y ++ +CK + ++ + +++ G P+ T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
S++ GL ++++ EA L+ VK +
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSR 395
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+PD+ TY +++ FC + A EM K++ PN L+ G K ++ D +
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M+ G+ + +Y + L K ++ +A A+L EM G +PN VTY+ I G C
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------- 350
K+ + A++ + M + SP+ Y T++ + + G E A+ +E + +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
PN T L+ GL A++VS+A EL+ +K + + +V T+ + GL
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 236
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 6/263 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A+ + ++ + ++ V +++++ L + E R+ + + K+ G PD+
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL-YVKSRGCPPDV 401
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y+ +I C++ A+ + M + ++ L+ G K + ++ + +L
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G YN I LC L EA L++EM P++VTY+ I+G C+
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521
Query: 302 FEEAKKFY-----RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+ A R ++ G + ++ Y +++ +CK G AL + +E I G +P+
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T L+ GL + + E + L+
Sbjct: 582 ITYSILLEGLKKSKDLHELRHLV 604
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 139/329 (42%), Gaps = 9/329 (2%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
S ++LE +A +P D + ++I ++ L + + + L E+ + N
Sbjct: 208 SQAVELLESMKARGCSP----DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN--L 261
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
++ +L+G +A A+ ++M +V + L+ L K+ + +
Sbjct: 262 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 321
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G PDL YN +I C++ + ++L IKP+ ++ +++ G +
Sbjct: 322 MIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ ++L ++ G V +Y+ I LCK K EA L + M G + VTYS
Sbjct: 381 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYS 440
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G +EA M G P++ Y +++ +C + A+ +E
Sbjct: 441 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 500
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T L+ G+ +V A L+
Sbjct: 501 NCAPSAVTYNILIHGMCRMERVDSAVVLL 529
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 115/296 (38%), Gaps = 44/296 (14%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ ALL + + +R F E ++ + P++ + +I C++ S A M
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEM-RSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM 70
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK---- 263
I + + AL++G +KE++ + +L M +G + V YN I LCK
Sbjct: 71 QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEP 130
Query: 264 -------------------------------LRKCAEAKALLDEMLSK-------GMKPN 285
K A AL EML + PN
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TYS I G CK +A + M G SP+ Y +V +CK A +
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
E + G VPN T SL+ GL A +VS+A L+ + T NV T+ + GL
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 16/265 (6%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYG--QANMTEH 128
D + +++ IN L +A+ + L + +PD+ +S ++YG ++N +
Sbjct: 330 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT-----YSSVIYGLCRSNRLDE 384
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R + V ++ L+ L A E ++ E G D+ TY+ +I
Sbjct: 385 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY-EVMAGDGCDADVVTYSTLI 443
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A+ +LA M R P+ ++ +L+ G ++ ++++ MER
Sbjct: 444 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 503
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDE-----MLSKGMKPNSVTYSHFIYGFCKDGNFE 303
YN+ IH +C++ + A LL++ + + G +++ YS I G CK G
Sbjct: 504 PSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVA 563
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMV 328
EA +++ M ++G+ P+ Y ++
Sbjct: 564 EALDYFQEMIDNGVIPDHITYSILL 588
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 11/318 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN L + F + +++ RPD+ + ++ I+ G + E A
Sbjct: 169 VTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDV-----YTYTTIINGLCKIGETAAAA 223
Query: 133 --FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
K+M+E + +V ++ ++ + + E +F + K GI PD+ TYN +I+
Sbjct: 224 GLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF-SYMKVKGISPDIFTYNSLIQG 282
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C S A ++L EM +I P+ +F LV KE K + VL+ M G++
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y+ ++ + EA+ L D M++KG KP+ +Y+ I G+CK +EAK+ +
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL+PN+ Y T+++ +C+ G A K G +PN T L+ G
Sbjct: 403 EMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462
Query: 371 KVSEAKELIGLVKEKFTK 388
+A L ++ ++K
Sbjct: 463 YFGKAFRLFRAMQSTYSK 480
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 8/286 (2%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNAL 151
I Y++ PD+ F +S+I G N ++ A EM + + FN L
Sbjct: 260 IFSYMKVKGISPDI----FTYNSLI-QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL 314
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ + E + V + G++PD+ TY+ ++ + S+ A + M K
Sbjct: 315 VDTICKEGKVSEAQGVLKTMTEM-GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
KP+ S+ L+ G+ K ++ ++ ++ M G+ YN IH LC+L EA+
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L M + G PN TYS + GFCK G F +A + +R M ++ PN +Y ++ M
Sbjct: 434 NLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
CK G+ A E KG PN +++ GL + EA E
Sbjct: 494 CKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 5/296 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ L PD+ +I G+ + + ++T EM + V +++L+ ++
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG---VEPDVVTYSSLMYGYSL 355
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ E +++F + T G KPD+ +YN +I +C+ A + EM + + PN
Sbjct: 356 RSEVVEARKLF-DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNV 414
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S+ L+ G + + + + M G + Y++ + CK +A L M
Sbjct: 415 SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
S KPN V Y+ I CK GN +A+K + + GL PN+ +Y T++ +CK G
Sbjct: 475 QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLL 534
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDT 392
+ AL + G P+ + ++ G S A +LIG +++K F +V T
Sbjct: 535 DEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +F M K + F LL A+ Y + + + G+ P++ T +
Sbjct: 79 DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F A+S+LA++ + ++P +F L+ K K+ ++ M G
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V Y I+ LCK+ + A A LL +M G +PN VTYS I KD EA
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEAL 258
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+SP+ Y +++ +C ++ A E + +P+ T LV +
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318
Query: 367 AGASKVSEAKELIGLVKE 384
KVSEA+ ++ + E
Sbjct: 319 CKEGKVSEAQGVLKTMTE 336
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P + T+ +I C+ + A + +M + +P+ ++ ++ G K +
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME G + V Y+ I S K R+ EA + M KG+ P+ TY+ I G
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C ++EA M + + P+ + +V +CK G A G K G P+
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T SL+ G + S+V EA++L
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKL 365
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMMERYGMKSG 250
C + A + M + P F L++ K +Y D V + + ME G+
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ ++ I+ L++ A ++L +++ G++P VT++ I CK G F +A + +
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G P+ Y T++ +CK G+ A G K+ G PN T +++
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252
Query: 371 KVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+V+EA ++ +K K + ++ T+N + GL
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGL 283
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 5/328 (1%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
+ E +AA TP D +++S IN L A + + + E++ + N + +
Sbjct: 31 LFEELKAAKWTP----DVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLV 86
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
G+A + A+R EM ++ V +N L+ L A E +F E + G
Sbjct: 87 DCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM-RERGC 145
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
PD TYN +I + S A +L EM+R P+ ++ +L+ G K+ + K
Sbjct: 146 VPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFK 205
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ Q M+R G K + + +L K + +A LLDEM +G+KP VTY+ I GF
Sbjct: 206 LFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFG 265
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G+ EA M +G P+ Y ++ + K + A K+ +G P+
Sbjct: 266 KVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTI 325
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK 385
T +L+ GL A +++A L +K K
Sbjct: 326 TYNTLINGLGKAGLLNDAGRLFDRMKSK 353
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 140/309 (45%), Gaps = 8/309 (2%)
Query: 96 QYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
+ LEE++ PD+ ++ I G+ T A + F+EM + F AL+
Sbjct: 170 ELLEEMERHGCPPDVMT---YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALM 226
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
AL A + + E K G+KP + TYN +I F + D AY++L EM R
Sbjct: 227 DALGKAGRVDDALELLDEM-KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ ++ L+ G K + ++ +VL+ ME+ G YN I+ L K +A
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L D M SKG P+ VTYS I K E A + M + G+ P+ Y +++ +
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLG 405
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVD 391
K G + A E KG P+ T + + L + EA+++ +KE +V
Sbjct: 406 KAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVA 465
Query: 392 TWNEIEAGL 400
T++ + GL
Sbjct: 466 TYDALLLGL 474
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 4/264 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+A + A+ EM E ++ V +NAL+ D E + E K G KPD
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM-KRNGCKPD 288
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY+ +I ++S A +L +M+++ P+ ++ L+ G K D ++
Sbjct: 289 VVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFD 348
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M+ G V Y+ I +L K + A L +EM S G++P+ TY I K G
Sbjct: 349 RMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++A + + M GLSP+ Y + + +GG ++ A ++ G +P+ T
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468
Query: 361 SLVTGLAGASKVSEAKELIGLVKE 384
+L+ GL SK E + GL+KE
Sbjct: 469 ALLLGL---SKTKEVDDACGLLKE 489
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 2/257 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +N+LL AL A +E + +F E K PD+ +Y+ +I + + +A +
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+AEM K KPN ++ LV K ++++ ++L M G V YN I +L K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +EA L EM +G P++ TY+ IYG K G ++A + M G P+
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +++ + K G+ A +E +G P+ T +L+ L A +V +A EL+ +K
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 384 EKFTK-NVDTWNEIEAG 399
E+ K V T+N + AG
Sbjct: 247 ERGVKPGVVTYNALIAG 263
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 1/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ ++ L +A + + L+E+K R + I +G+ A
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + V ++ L+ L A E +V + K G PD TYN +I +
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKE-GCPPDTITYNTLINGLGK 336
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A + M K P+ ++ L+ K + E + + ME G++ +
Sbjct: 337 AGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT 396
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I L K + +A L EM KG+ P+ +TY+ F+ + G F+EA+K + M
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SGL P+ + Y ++ + K + + A G KE I +G + + L V
Sbjct: 457 ESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVD 516
Query: 374 EAKELIGLVKEK 385
EA EL+ K
Sbjct: 517 EAHELLQFANSK 528
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A F+E+ K V +++ L+ +L A ++ V E + G KP+L
Sbjct: 21 KAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM-QAKGCKPNL 79
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ ++ A +LAEM P+ ++ L++ K + + +
Sbjct: 80 WTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAE 139
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G YN I+ L K+ + +A LL+EM G P+ +TYS I G KDG
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+A K ++ M G P+S + ++ + K G + AL E +G P T +
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
L+ G + EA L+ +K K +V T++ + GL
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 140/306 (45%), Gaps = 1/306 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S I L +A+ + Q L++++ + + I G+A + A R F
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M V ++ L+ AL A + +F E ++ GI+PDL TY +I +
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM-ESVGIQPDLFTYCSIITVLGK 406
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +EM K + P+ ++ A + + ++++ K+ + M+ G+ V+
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ + L K ++ +A LL E++ +G +S+ + + GN +EA + + +
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL P +S Y ++ + K G A ++ +G P+ + SL++ L ++
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586
Query: 374 EAKELI 379
A EL+
Sbjct: 587 TAFELL 592
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 9/259 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSII-LYGQANMTEHA 129
D + +S I L +A EE+++ +PDL F SII + G+A + A
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDL----FTYCSIITVLGKAGQVDDA 413
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
R F EM L V +NA L +L +KE +++F E K G+ PD+ TY+ ++
Sbjct: 414 DRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF-EDMKESGLLPDVATYDALLL 472
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
++ + A +L E+ + ++ F + ++ +++LQ G+
Sbjct: 473 GLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWP 532
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
G S YN I +L K + +EA L+++ +G KP+ V+YS I + G + A +
Sbjct: 533 GASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELL 592
Query: 310 RIMSNSGLSPNSSVYFTMV 328
MS GL + Y +V
Sbjct: 593 EEMSKRGLKLSPRSYSNLV 611
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN ++ A ++ A + E+ P+ S+ L+ + K+E +V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+ G K + YN + L K + EA LL EM G P+ TY+ I K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA + M G P++ Y +++Y + K G + A+ +E G P+ T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
SL+TGL + +A +L +K + K
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRK 216
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
+ +++ R L+P D + ++ +N L F + E++K L + +
Sbjct: 412 DADRLFSEMRGKGLSP----DVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
++ + + A KE+ E F+ L LT + E + ++F
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL-LQFAN 526
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+ P +YN +I A ++ S A++ L ++ + KP+ S+ +L++ + + +
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++L+ M + G+K Y+ + L
Sbjct: 587 TAFELLEEMSKRGLKLSPRSYSNLVRKL 614
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 153/329 (46%), Gaps = 7/329 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A + + L+E+ + NE I + Q + E A
Sbjct: 385 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 444
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M EH ++ +NAL+ + +F P KP+ TY ++ C
Sbjct: 445 EQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCN 500
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A +LAEM +K PN +F LV+ F ++ ++ ++++ M +G +
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 560
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + + K EA LL ++S G+ P+ VTYS I ++ EEA K + I+
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 620
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P + +Y ++ +CK + + A+ F ++ G +PN T +L+ GLA +
Sbjct: 621 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 680
Query: 374 EAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
E ++L+ +E ++ V N +E P+
Sbjct: 681 ETRDLL---RELCSRGVLNKNLLEEWRPK 706
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + TY +++A C+S+ A +L EM K PN ++ ++ G +E + +D
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L + YG + Y + LC ++ + + L EM+ K PN VT+ +
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + MS G + N+++ ++ +CK G + A F + G P+
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + +AKEL+ +V++ N T+N
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM ++ +N ++ + + R F+ +YG +PD +Y V
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA-REFLNRLSSYGFQPDTVSYTTV 287
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + + AEM K+ PN +F LV F + E +VL+ M +G
Sbjct: 288 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ ++ N+ I+++CK + +A L+ M S G P++++Y+ + G C+ +E+AK+
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M PN + T + +C+ G E A ++ G N T +LV G
Sbjct: 408 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 467
Query: 368 GASKVSEAKEL 378
+V A EL
Sbjct: 468 VQGRVDSALEL 478
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 9/322 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA--NMTEHAVRTF 133
+ +++ + + ++ F + L+E++ + N +++I+ G + A
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN--IVTYNVIINGMCREGRVDDAREFL 269
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ + + ++ +L L AK +++V+ +F E + P+ T++ +++ FC
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDMLVRFFCR 328
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M N + ++ K+ + +D + L M YG
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + LC+ + +AK LL EM+ K PN VT++ FI C+ G E+A MS
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G N Y +V C G ++AL K PN T +L+TGL A ++
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 505
Query: 374 EAKELIG-LVKEKFTKNVDTWN 394
A EL+ ++++ NV T+N
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFN 527
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A R + + V A+N L+ +R+ P + PD TY
Sbjct: 125 TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYT 180
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C+ A S+L +M + +P+ ++ L+ K + +VL M
Sbjct: 181 PIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 240
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YNV I+ +C+ + +A+ L+ + S G +P++V+Y+ + G C +E+
Sbjct: 241 GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 300
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ + M PN + +V F C+GG E A+ ++ G N T ++
Sbjct: 301 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 360
Query: 366 LAGASKVSEAKELI 379
+ +V +A + +
Sbjct: 361 ICKQGRVDDAFQFL 374
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ + G PD+ ++I+ C +S A +L +R + ++ LVAG+
Sbjct: 96 LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ Y ++ +++ + Y I LC + EA +LLD+ML +G +P+ V
Sbjct: 156 R---YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ + CK F +A + M G +PN Y ++ MC+ G + A F
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ G+ P+ + +++ GL A + + +EL + EK
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A L+D S+G P+ + I C+ G +A + R SG + + Y T+V
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 330 FMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKVSEAKELI 379
C+ G + A + IA V P+ T ++ GL +V EA L+
Sbjct: 153 GYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLL 199
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 145/305 (47%), Gaps = 9/305 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+++ PD++ + +I++ G + E A++ +KEM ++ + +F+ L+ L
Sbjct: 252 MDDFGVAPDVR-----SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GL 305
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + ++ + +G+ PD Y VI FC + S A + EM P+
Sbjct: 306 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 365
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G KE + D +L M G+ + + IH C K +A L D
Sbjct: 366 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 425
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
ML++ ++P+ VTY+ I G C+ G+ ++A + M + + PN Y ++ C+ G
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
E A GF E I KG +PN T S++ G + VS+ ++ + ++ K + ++ T+N
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545
Query: 395 EIEAG 399
+ G
Sbjct: 546 TLIHG 550
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D +F+I I + +E++ R PDL + + I L+ + +HA+
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS---FSCLIGLFARRGKMDHAM 316
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+EM L + ++ A + RV E G PD+ TYN ++
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNG 375
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A +L EM + + P+ +F L+ G+ E K + ++ M ++
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN I +C+ +A L D+M S+ + PN VTYS I C+ G E+A F
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G+ PN Y +++ C+ G+ F ++ + P+ T +L+ G
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555
Query: 371 KVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
K+ +A +L+ ++ KEK +V T+N + G
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 586
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 137/311 (44%), Gaps = 7/311 (2%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE 127
S ++ +I ++ +A F+ + + E++ R PD+ + G A E
Sbjct: 152 SEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA---E 208
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ M L+ + +N++L L + + + VF E +G+ PD+ ++ +
Sbjct: 209 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTIL 267
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I FC + A I EM + IKP+ SF L+ F + K + L+ M +G+
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 327
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+Y + I C+ ++A + DEM+ G P+ VTY+ + G CK+ +A+
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 387
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M G+ P+ + T+++ C G + AL + + P+ T +L+ G+
Sbjct: 388 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 447
Query: 368 GASKVSEAKEL 378
+ +A +L
Sbjct: 448 RQGDLDKANDL 458
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM++ + V N ++ A A D E ++ + G+KP + TYN V+K
Sbjct: 178 VISEMEKRCVFPDVVTHNVMVDARFRAGD-AEAAMALVDSMVSKGLKPGIVTYNSVLKGL 236
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S A+ + EMD + P+ SF L+ GF + + E+ K+ + M G+K +
Sbjct: 237 CRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDL 296
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
++ I + K A A L EM G+ P+ V Y+ I GFC+ G +A +
Sbjct: 297 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 356
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G P+ Y T++ +CK A G E +G P+ T +L+ G K
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +A +L ++ ++ ++ T+N + G+
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 7/285 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ +N L + L E++ R PDL H + G+ + A+
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK---LDKAL 421
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F M +LR + +N L+ + D + ++ + + I P+ TY+ +I +
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDS 480
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
CE A+ L EM K I PN ++ +++ G+ + K LQ M +
Sbjct: 481 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN IH K K +A LL+ M + ++P+ VTY+ I GF GN +EA +
Sbjct: 541 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 600
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M G+ P+ Y +M+ G+ + A E + +G+ P+
Sbjct: 601 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLR------------------------------HSVGAFN 149
Y Q+ A F+ + +H++ S N
Sbjct: 96 YTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVN 155
Query: 150 ALLLALTI-----AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
L + + A ++ +V V E K + PD+ T+N ++ A + D+ +A +++
Sbjct: 156 TYTLNIMVHNYCKALEFDKVDAVISEMEKRC-VFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M K +KP ++ +++ G + ++ +V + M+ +G+ V + + I C++
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ EA + EM +G+KP+ V++S I F + G + A + R M GL P+ +Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
++ C+ G AL E + G +P+ T +L+ GL ++ +A+ L+ ++E
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 385 K 385
+
Sbjct: 395 R 395
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM E + + F L+ I + ++F + ++PD+ TYN +I C
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF-DTMLNQRLRPDIVTYNTLIDGMC 447
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D A + +M + I PN ++ L+ ++ + ED L M G+ +
Sbjct: 448 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C+ ++ + L +M+ + P+ +TY+ I+G+ K+ +A K +M
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ P+ Y ++ G+ + A ++ AKG P+ T S++ G A
Sbjct: 568 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 627
Query: 373 SEAKEL 378
EA +L
Sbjct: 628 KEAFQL 633
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 18/306 (5%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
A + +L+ A +G+ L+E++ R E +I + +A + A++TF
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTF--- 113
Query: 137 DEHKLRHSVGA-------FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++ RH +G +N LL AL V V+ K G++P++ TYN +IK
Sbjct: 114 --YRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKA-GVEPNVYTYNLLIK 170
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C++ +A +L EM RK +P+ S +++ K ++ ++ +L M G
Sbjct: 171 ALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG--- 227
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ YN +H+LC + E ++DEM+ +G++P++V Y+ + FCK A
Sbjct: 228 --ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAIL 285
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M G PN + +V G ALG +A+GW P+ + L+ GL
Sbjct: 286 ARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHI 345
Query: 370 SKVSEA 375
+ A
Sbjct: 346 GDLKRA 351
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 143/340 (42%), Gaps = 13/340 (3%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R A + P + +++ I L + + + L+E+ + +E H I +
Sbjct: 154 RKAGVEPNVY----TYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCK 209
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGA-FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ + A EM VGA +NA++ AL +EV V E G++PD
Sbjct: 210 LDRLDEARGILAEMT------PVGASYNAVVHALCGQFRMREVFLVVDEMVHR-GLRPDT 262
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y ++ AFC++ + A +ILA M + PN +F LV GF+ + K D +
Sbjct: 263 VAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNW 322
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G YNV I LC + A + M P+ TYS I GF K G+
Sbjct: 323 MVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGD 382
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+ A + M+N+G PN VY MV +CK ++ A + + PN T +
Sbjct: 383 LDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNT 442
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ L + A + G+ + N T+NE+ GL
Sbjct: 443 LIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGL 482
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ T+N +I++ C+ + A ++ M R PN ++ L+ G ++E ED ++
Sbjct: 435 PNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRM 494
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M +G + + YN I LC++R EA LL M+ +G++P++ T++ I+ +CK
Sbjct: 495 LTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCK 554
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+GN A M N Y +++ +C + A+ + + + +G PN T
Sbjct: 555 EGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEAT 614
Query: 359 MKSLVTGL 366
LV G+
Sbjct: 615 WNVLVRGI 622
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 4/290 (1%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++++++ G ++ + A+ F M + V ++ L+ + A D ++ +
Sbjct: 334 SYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDM 393
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G KP++ Y ++ C+ A +++ +M ++ PN +F L+ +
Sbjct: 394 TNA-GCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
V M RYG YN +H L + C +A +L EML+ G + + V+Y+
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G C+ +EA M G+ P++ + +++ CK G+ A A
Sbjct: 513 TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVN 572
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
N SL++GL K+ +A L+ ++ E N TWN + G+
Sbjct: 573 CPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P +YN +I+ C D A + + M + P+ ++ L+ GF K +
Sbjct: 327 GWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVA 386
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G K V +Y + LCK +A+ L+D+M + PN++T++ I
Sbjct: 387 MSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRS 446
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G A + M G PN Y +++ + + G+ E AL E + G+ +
Sbjct: 447 LCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELS 506
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + ++GL + EA L+G ++ + + T+N I
Sbjct: 507 LVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAI 548
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 153/329 (46%), Gaps = 7/329 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A + + L+E+ + NE I + Q + E A
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 413
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M EH ++ +NAL+ + +F P KP+ TY ++ C
Sbjct: 414 EQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCN 469
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A +LAEM +K PN +F LV+ F ++ ++ ++++ M +G +
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + + K EA LL ++S G+ P+ VTYS I ++ EEA K + I+
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P + +Y ++ +CK + + A+ F ++ G +PN T +L+ GLA +
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649
Query: 374 EAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
E ++L+ +E ++ V N +E P+
Sbjct: 650 ETRDLL---RELCSRGVLNKNLLEEWRPK 675
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + TY +++A C+S+ A +L EM K PN ++ ++ G +E + +D
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L + YG + Y + LC ++ + + L EM+ K PN VT+ +
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + MS G + N+++ ++ +CK G + A F + G P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + +AKEL+ +V++ N T+N
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM ++ +N ++ + + R F+ +YG +PD +Y V
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA-REFLNRLSSYGFQPDTVSYTTV 256
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + + AEM K+ PN +F LV F + E +VL+ M +G
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ ++ N+ I+++CK + +A L+ M S G P++++Y+ + G C+ +E+AK+
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M PN + T + +C+ G E A ++ G N T +LV G
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436
Query: 368 GASKVSEAKEL 378
+V A EL
Sbjct: 437 VQGRVDSALEL 447
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 9/322 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA--NMTEHAVRTF 133
+ +++ + + ++ F + L+E++ + N +++I+ G + A
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN--IVTYNVIINGMCREGRVDDAREFL 238
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ + + ++ +L L AK +++V+ +F E + P+ T++ +++ FC
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDMLVRFFCR 297
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M N + ++ K+ + +D + L M YG
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + LC+ + +AK LL EM+ K PN VT++ FI C+ G E+A MS
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G N Y +V C G ++AL K PN T +L+TGL A ++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 474
Query: 374 EAKELIG-LVKEKFTKNVDTWN 394
A EL+ ++++ NV T+N
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFN 496
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A R + + V A+N L+ +R+ P + PD TY
Sbjct: 94 TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYT 149
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C+ A S+L +M + +P+ ++ L+ K + +VL M
Sbjct: 150 PIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 209
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YNV I+ +C+ + +A+ L+ + S G +P++V+Y+ + G C +E+
Sbjct: 210 GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 269
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ + M PN + +V F C+GG E A+ ++ G N T ++
Sbjct: 270 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 366 LAGASKVSEAKELI 379
+ +V +A + +
Sbjct: 330 ICKQGRVDDAFQFL 343
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 4/237 (1%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
NA L L D E R ++ + G PD+ ++I+ C +S A +L +
Sbjct: 47 NARLRRLIARDDLAEAAR-LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
R + ++ LVAG+ + Y ++ +++ + Y I LC +
Sbjct: 106 RSGTAVDVFAYNTLVAGYCR---YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG 162
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA +LLD+ML +G +P+ VTY+ + CK F +A + M G +PN Y ++
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
MC+ G + A F + G+ P+ + +++ GL A + + +EL + EK
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 157/355 (44%), Gaps = 34/355 (9%)
Query: 76 LAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN L + + L+ EL+ PD R GQ H +
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM-- 557
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M+ SV FN+ + IAK + +V + E G+ P+L TY +I +C
Sbjct: 558 -NKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM-SARGLSPNLVTYGALIAGWC 615
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A ++ EM + PN AL++ FYKE K ++ N VLQ + M G S
Sbjct: 616 KEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCS 675
Query: 253 --------------------------MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
M+NV I LCK + A+AK+L + + +K P++
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
TYS I+G G+ +EA +M ++GL+PN Y +++Y +CK G A+ +
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+KG PN T +L+ K +EA +L +V+E V T++ + GL
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGL 850
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 115 HSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
H+++ Y TE A R + + L +V + L+ +E +RV E +
Sbjct: 257 HAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKE 316
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T I D Y +I +C+ A + EM I N + ++ G K + E
Sbjct: 317 TGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRME 376
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+V KVLQ ME GM+ YN I C+ +A + M+ G+ ++TY+ +
Sbjct: 377 EVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFC ++A + + +M G++PN T++ + K G E AL KE++A+G
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLA 496
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
N T +++ GL +++EA+EL+ +KE
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKE 527
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +I C+S S A ++ ++ K I PN ++ L+ + KE K +
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ Q M G++ V Y++ I+ LC EA LLD+M+ + PN +TY I+G
Sbjct: 825 FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ K GN EE K Y M GL P + +
Sbjct: 885 YIKSGNMEEISKLYDEMHIRGLLPTNWI 912
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 14/225 (6%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C+S + A S+ + K P+ ++ +L+ G ++ + +M
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN I+ LCK K + A L +++ SKG+ PN +TY+ I +CK+G
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA K + M G+ P Y ++Y +C G E A+ + I PN+ T +L+
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Query: 364 TGLAGASKVSEAKELI------GLVKEKFTKN--------VDTWN 394
G + + E +L GL+ + N V+ WN
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVVNNWN 927
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 26/357 (7%)
Query: 44 AALTLLKSES--NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
AA LL S S P + R L P++ L F +A ++ S ++ +Q L L
Sbjct: 57 AAERLLASSSPLTPALLQAALRRVRLDPDAALH--LFRLAPSRPSLVSH----AQLLHIL 110
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE--HKLRHSVGAFNALLLALTIAK 159
+ RFH +L +++ HA F + E S +F+ LL A A
Sbjct: 111 A-----RARRFHDARALL---SSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAG 162
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
VF K G +P L + NR++ +S D A + +M + P+ +
Sbjct: 163 QLSSALNVFDGMGKV-GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTV 221
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ + ++ + + ++ ME G++ + Y+ + C + +A+ +L+ +
Sbjct: 222 AIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQR 281
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG-LSPNSSVYFTMVYFMCKGGDYE 338
KG+ PN VTY+ + G+CKDG EEA++ + M +G + + Y M+ C+ G +
Sbjct: 282 KGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMD 341
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFTKN 389
A E G N +++ GL ++ E +++ +G+ +K++ N
Sbjct: 342 DATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 134/313 (42%), Gaps = 6/313 (1%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ-NERF 112
+ +ILE + L+P + + +++ + + + ++E+K D+ +E
Sbjct: 271 DARRILESLQRKGLSP----NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ I Y Q + A R EM + + ++ +N ++ L +EV++V E
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM- 385
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G++PD +YN +I +C A+ + M R + ++ L+ GF
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+D ++ +M + G+ + + L K K +A L E L++G+ N +T++
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK G EA++ M P+S Y T+ CK G TA + G+
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565
Query: 353 VPNFTTMKSLVTG 365
P+ S +TG
Sbjct: 566 APSVEMFNSFITG 578
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
H V T + + H + +N ++ L + + K +F E + PD TY+ +
Sbjct: 686 HVVDTIADGNPHS---ANVMWNVIIFGLCKSGRIADAKSLF-ESLRNKRFLPDNFTYSSL 741
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I S A+S+ M + PN ++ +L+ G K K + ++ G+
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
YN I CK K EA L +M+ +G++P +TYS IYG C G EEA K
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIK 861
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
M + + PN Y T+++ K G+ E E +G +P
Sbjct: 862 LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ ++ T+N VI C+ + A +L M P++ ++ L G+ K +
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ ME G V M+N I ++ + + EM ++G+ PN VTY I G
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPN 320
+CK+GN EA Y M N+G++PN
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPN 638
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 145/305 (47%), Gaps = 9/305 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+++ PD++ + +I++ G + E A++ +KEM ++ + +F+ L+ L
Sbjct: 191 MDDFGVAPDVR-----SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GL 244
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + ++ + +G+ PD Y VI FC + S A + EM P+
Sbjct: 245 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G KE + D +L M G+ + + IH C K +A L D
Sbjct: 305 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 364
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
ML++ ++P+ VTY+ I G C+ G+ ++A + M + + PN Y ++ C+ G
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
E A GF E I KG +PN T S++ G + VS+ ++ + ++ K + ++ T+N
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 395 EIEAG 399
+ G
Sbjct: 485 TLIHG 489
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D +F+I I + +E++ R PDL + + I L+ + +HA+
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS---FSCLIGLFARRGKMDHAM 255
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+EM L + ++ A + RV E G PD+ TYN ++
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNG 314
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A +L EM + + P+ +F L+ G+ E K + ++ M ++
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN I +C+ +A L D+M S+ + PN VTYS I C+ G E+A F
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G+ PN Y +++ C+ G+ F ++ + P+ T +L+ G
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494
Query: 371 KVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
K+ +A +L+ ++ KEK +V T+N + G
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 525
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 137/311 (44%), Gaps = 7/311 (2%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE 127
S ++ +I ++ +A F+ + + E++ R PD+ + G A E
Sbjct: 91 SEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA---E 147
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ M L+ + +N++L L + + + VF E +G+ PD+ ++ +
Sbjct: 148 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTIL 206
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I FC + A I EM + IKP+ SF L+ F + K + L+ M +G+
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 266
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+Y + I C+ ++A + DEM+ G P+ VTY+ + G CK+ +A+
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M G+ P+ + T+++ C G + AL + + P+ T +L+ G+
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 386
Query: 368 GASKVSEAKEL 378
+ +A +L
Sbjct: 387 RQGDLDKANDL 397
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM++ + V N ++ A A D E ++ + G+KP + TYN V+K
Sbjct: 117 VISEMEKRCVFPDVVTHNVMVDARFRAGD-AEAAMALVDSMVSKGLKPGIVTYNSVLKGL 175
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S A+ + EMD + P+ SF L+ GF + + E+ K+ + M G+K +
Sbjct: 176 CRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDL 235
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
++ I + K A A L EM G+ P+ V Y+ I GFC+ G +A +
Sbjct: 236 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 295
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G P+ Y T++ +CK A G E +G P+ T +L+ G K
Sbjct: 296 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 355
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +A +L ++ ++ ++ T+N + G+
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 7/281 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ +N L + L E++ R PDL H + G+ + A+
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK---LDKAL 360
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F M +LR + +N L+ + D + ++ + + I P+ TY+ +I +
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDS 419
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
CE A+ L EM K I PN ++ +++ G+ + K LQ M +
Sbjct: 420 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 479
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN IH K K +A LL+ M + ++P+ VTY+ I GF GN +EA +
Sbjct: 480 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 539
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
M G+ P+ Y +M+ G+ + A E + +G
Sbjct: 540 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLR------------------------------HSVGAFN 149
Y Q+ A F+ + +H++ S N
Sbjct: 35 YTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVN 94
Query: 150 ALLLALTI-----AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
L + + A ++ +V V E K + PD+ T+N ++ A + D+ +A +++
Sbjct: 95 TYTLNIMVHNYCKALEFDKVDAVISEMEKRC-VFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M K +KP ++ +++ G + ++ +V + M+ +G+ V + + I C++
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ EA + EM +G+KP+ V++S I F + G + A + R M GL P+ +Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
++ C+ G AL E + G +P+ T +L+ GL ++ +A+ L+ ++E
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 385 K 385
+
Sbjct: 334 R 334
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM E + + F L+ I + ++F + ++PD+ TYN +I C
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF-DTMLNQRLRPDIVTYNTLIDGMC 386
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D A + +M + I PN ++ L+ ++ + ED L M G+ +
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C+ ++ + L +M+ + P+ +TY+ I+G+ K+ +A K +M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ P+ Y ++ G+ + A ++ AKG P+ T S++ G A
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566
Query: 373 SEAKEL 378
EA +L
Sbjct: 567 KEAFQL 572
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 158/340 (46%), Gaps = 7/340 (2%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
ILE R + P D ++ I +A YL E+ R N + I
Sbjct: 473 ILERMREQGILP----DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 528
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
Y +A E A R F EM + +VG + AL+ + E VF F + +
Sbjct: 529 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF-RFILSRRV 587
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
D+ TY+ +I + A+ I +E+ K + PNA ++ +L++G K+ + ++
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L+ M G+ + YN+ I LCK + AK L D++ +G+ PN VTY+ + G+C
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K N A + M G+ P++ +Y ++ F CK +E AL +E + KG+
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-V 766
Query: 358 TMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ +L+ G + K+ EA L+ +++++F N T+ +
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 16/280 (5%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY------ 175
+ N E + F M HK+ V + ++ A + K+ KRV +E +
Sbjct: 201 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEA 260
Query: 176 ----------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
G+ PDL TY+ +I FC S A +L EM +KP ++ AL+ G
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 320
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
F ++ E ++ M G+++ + ++N ++ +CK K +A ++ EM+ KG++P+
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
S TYS I G C+ N A + M L+P Y ++ +C+ G+ + +
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E + G PN +L+T A +V E++ ++ ++E+
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 2/273 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + + A+ + M + L + ++ L+ + K +E K + +E G+KP+
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV-GLKPEP 311
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I F D A+ I EM I+ N + L+ G K K E +++Q
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 371
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G++ Y++ I C+ + A A LLDEM + + P +TYS I G C+ GN
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+ R M +GL PN+ VY T++ K G E + + +G +P+ S
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 362 LVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTW 393
L+ G A ++ EA+ L+ +++ + N T+
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 4/269 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+EM + L+ + + L+ A AK+ + E R+ +E + GI PD+ YN +I F
Sbjct: 439 LREMVMNGLKPNAVVYTTLMTAH--AKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A + L EM + ++PNA ++GA + G+ K + E ++ M G+ V
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+Y I CK EA ++ +LS+ + + TYS I+G ++G EA +
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ GL PN+ Y +++ CK G+ + A +E KG P+ T L+ GL A +
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676
Query: 372 VSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ AK L ++ + T N T+ + G
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDG 705
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+ +EM E + ++ L+ ++ + E K + P +
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR-KLAPTV 416
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ +I C + +IL EM +KPNA + L+ KE + E+ +L+
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ V YN I CK ++ EA+ L EML + ++PN+ TY FI G+ K G
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A +++ M + G+ PN +Y ++ CK G+ A + +++ + + T
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L+ GL+ K+ EA + ++EK N T+N + +G
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 635
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + L+ +NAL+ D ++ R+ E GI+ +L +N ++ C++
Sbjct: 301 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC-GIEANLIIWNTLLNGVCKA 359
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A I+ EM K ++P++ ++ L+ G + + ++L M++ + V Y
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 419
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+V I+ LC+ A+L EM+ G+KPN+V Y+ + K+G EE++ M
Sbjct: 420 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ Y +++ CK E A + E + + PN T + + G + A ++
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 375 A 375
A
Sbjct: 540 A 540
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 19/256 (7%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E VF+ PK + +P L + N ++ + + + + M + P+ ++ +
Sbjct: 172 EAVNVFLG-PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 230
Query: 223 VAGFYKEEKYEDVNKV-LQMMERY----------------GMKSGVSMYNVRIHSLCKLR 265
++ K +D +V L+M E+ G+ + Y++ I+ C +
Sbjct: 231 ISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 290
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ EAK +L EM+ G+KP +TY+ I GF + G+ E+A + M G+ N ++
Sbjct: 291 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 350
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
T++ +CK G E AL +E + KG P+ T L+ G ++ A EL+ + K
Sbjct: 351 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 410
Query: 385 KFTKNVDTWNEIEAGL 400
K V T++ I GL
Sbjct: 411 KLAPTVLTYSVIINGL 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 18/317 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++I I+ L +A ++++ R N +A + Y ++ A +
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + +N +L + +++ +F E + G + ++N +I+ +C+
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTV-SFNTLIEGYCK 777
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALV-----AGFYKEEKYEDVNKVLQMMERYGMK 248
S A +L EM K PN ++ +L+ AG E K L+M ER M
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK----RLWLEMQERNVMP 833
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + Y +H + +E AL +EM++KG++P+ +TY I +C++GN EA K
Sbjct: 834 TAKT-YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892
Query: 309 YRIMSNSGLSPNSSVYFTM--VYFMCKG----GDYETALGFCKESIAKGWVPNFTTMKSL 362
+ G+ S + + +G G+ + A + + GWV N T++ L
Sbjct: 893 KDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDL 952
Query: 363 VTGLAGASKVSEAKELI 379
V G + ++ L+
Sbjct: 953 VDGNQNGANSEDSDNLL 969
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 89/246 (36%), Gaps = 26/246 (10%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAY--SILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
YG DL IK +SDS A SI+ + PN+ F L+ + K
Sbjct: 117 YGPASDL------IKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFL 170
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ V + + + + N + L K K + D M + + P+ TY++
Sbjct: 171 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 230
Query: 293 IYGFCKDGNFEEAKKFY-----------------RIMSNSGLSPNSSVYFTMVYFMCKGG 335
I CK GN ++AK+ R M + GL P+ Y ++ C
Sbjct: 231 ISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 290
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
A E I G P T +L+ G + +A + +V N+ WN
Sbjct: 291 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 350
Query: 395 EIEAGL 400
+ G+
Sbjct: 351 TLLNGV 356
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 158/340 (46%), Gaps = 7/340 (2%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
ILE R + P D ++ I +A YL E+ R N + I
Sbjct: 482 ILERMREQGILP----DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
Y +A E A R F EM + +VG + AL+ + E VF F + +
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF-RFILSRRV 596
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
D+ TY+ +I + A+ I +E+ K + PNA ++ +L++G K+ + ++
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L+ M G+ + YN+ I LCK + AK L D++ +G+ PN VTY+ + G+C
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K N A + M G+ P++ +Y ++ F CK +E AL +E + KG+
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-V 775
Query: 358 TMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ +L+ G + K+ EA L+ +++++F N T+ +
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
F+G+ + K PD+ + + I + + + A R EM E ++ +N
Sbjct: 203 FDGMCAH----KVLPDVYT---YTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV 255
Query: 151 LLLALTIAK---DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
++ L A+ + E+KR ++ G+ PDL TY+ +I FC S A +L EM
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVD----KGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 311
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+KP ++ AL+ GF ++ E ++ M G+++ + ++N ++ +CK K
Sbjct: 312 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A ++ EM+ KG++P+S TYS I G C+ N A + M L+P Y +
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +C+ G+ + +E + G PN +L+T A +V E++ ++ ++E+
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 489
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+++I+ G +A + + A+ + M + L + ++ L+ + K +E K + +E
Sbjct: 253 YNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI 312
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+KP+ TYN +I F D A+ I EM I+ N + L+ G K K
Sbjct: 313 DV-GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E +++Q M G++ Y++ I C+ + A A LLDEM + + P +TYS
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C+ GN + R M +GL PN+ VY T++ K G E + + +G
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTW 393
+P+ SL+ G A ++ EA+ L+ +++ + N T+
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 4/269 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+EM + L+ + + L+ A AK+ + E R+ +E + GI PD+ YN +I F
Sbjct: 448 LREMVMNGLKPNAVVYTTLMTAH--AKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A + L EM + ++PNA ++GA + G+ K + E ++ M G+ V
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+Y I CK EA ++ +LS+ + + TYS I+G ++G EA +
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ GL PN+ Y +++ CK G+ + A +E KG P+ T L+ GL A +
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685
Query: 372 VSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ AK L ++ + T N T+ + G
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDG 714
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+ +EM E + ++ L+ ++ + E K + P +
Sbjct: 367 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK-LAPTV 425
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ +I C + +IL EM +KPNA + L+ KE + E+ +L+
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ V YN I CK ++ EA+ L EML + ++PN+ TY FI G+ K G
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A +++ M + G+ PN +Y ++ CK G+ A + +++ + + T
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L+ GL+ K+ EA + ++EK N T+N + +G
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + L+ +NAL+ D ++ R+ E GI+ +L +N ++ C++
Sbjct: 310 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC-GIEANLIIWNTLLNGVCKA 368
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A I+ EM K ++P++ ++ L+ G + + ++L M++ + V Y
Sbjct: 369 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+V I+ LC+ A+L EM+ G+KPN+V Y+ + K+G EE++ M
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ Y +++ CK E A + E + + PN T + + G + A ++
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 375 A 375
A
Sbjct: 549 A 549
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E VF+ PK + +P L + N ++ + + + + M + P+ ++ +
Sbjct: 163 EAVNVFLG-PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 221
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
++ K +D +VL M G + YNV I LC+ R EA L M+ KG+
Sbjct: 222 ISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGL 281
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ TY I GFC + EAK M + GL P Y ++ + GD E A
Sbjct: 282 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 341
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E +A G N +L+ G+ A K+ +A E++ + EK
Sbjct: 342 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 384
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 145/332 (43%), Gaps = 13/332 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++I I+ L +A ++++ R N +A + Y ++ A +
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 728
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + +N +L + +++ +F E + G + ++N +I+ +C+
Sbjct: 729 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTV-SFNTLIEGYCK 786
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALV-----AGFYKEEKYEDVNKVLQMMERYGMK 248
S A +L EM K PN ++ +L+ AG E K L+M ER M
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK----RLWLEMQERNVMP 842
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + Y +H + +E AL +EM++KG++P+ +TY I +C++GN EA K
Sbjct: 843 TAKT-YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 901
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ G+ + + Y ++ +CK ++ L E G+ T + G
Sbjct: 902 KDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQI 961
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
A + EA E++ +VK + N + ++ G
Sbjct: 962 AGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 14/223 (6%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAY--SILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
YG DL IK +SDS A SI+ + PN+ F L+ + K
Sbjct: 108 YGPASDL------IKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFL 161
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ V + + + + N + L K K + D M + + P+ TY++
Sbjct: 162 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 221
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK GN ++AK+ M G SPN Y ++ +C+ + A+ + + KG
Sbjct: 222 ISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGL 281
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFTKN 389
VP+ T L+ G + EAK + +GL E T N
Sbjct: 282 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYN 324
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 150/323 (46%), Gaps = 3/323 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F + I+KL AN F + L +K E YG+ +M A+R F
Sbjct: 49 DHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVF 108
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M++ + + ++ ++ A+ + ++ +V F ++ + G++ + + N +IKA C+
Sbjct: 109 HKMNDFGCKPTDKSYISVF-AILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCK 167
Query: 194 SSDS-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + +A+ I EM ++ P++ ++G L+ G K K + ++ + M+ G V
Sbjct: 168 NSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVV 227
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ +H LC+ EA L D+M K ++PN TYS + G CK+G EA + +M
Sbjct: 228 TYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMM 287
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
PN Y T++ +CK G A+ +G P+ ++ G K
Sbjct: 288 VRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKF 347
Query: 373 SEAKELIG-LVKEKFTKNVDTWN 394
EA + +V + + N TW+
Sbjct: 348 QEAATYLDEMVLGQISPNRVTWS 370
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 8/261 (3%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A FKEMD SV ++ L+ L A + E +F + K I+P++ TY+
Sbjct: 207 TFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK-AIEPNVFTYS 265
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ C++ S A +L M RK KPN ++ L+ G KE K + + L M+
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-------HFIYGFCK 298
G+K +Y I+ C +RK EA LDEM+ + PN VT+S + G C
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+GN + + Y M G+S ++ + ++V CK GD A E + G VP+
Sbjct: 386 NGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGI 445
Query: 359 MKSLVTGLAGASKVSEAKELI 379
++V G KV EA E I
Sbjct: 446 WSAVVGGFWDRRKVREAFESI 466
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E R IE G P YN +I +C D +L EM+ K I P ++GA+
Sbjct: 293 EEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAI 352
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ ++ + +L M+ G+ V +YN I++LCK R ++A A+L++M++
Sbjct: 353 IHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRF 412
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ VT++ I FC++G+ EEA K R L PN Y +++ C G+ A
Sbjct: 413 DPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASD 472
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIE 397
E I +G P+ T+ +L+ GL + +V EA +V+EK + + + +N +
Sbjct: 473 LLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEAL----MVREKMAERQVMPDANIYNVLI 528
Query: 398 AGL 400
+GL
Sbjct: 529 SGL 531
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 4/326 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + I+ L + I L E+K R N + + I + A+ +
Sbjct: 347 VTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQ 406
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + V FN L+ A D +E ++ E + ++P+ +Y +I FC
Sbjct: 407 MVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRE-LEPNQLSYTPLIHGFCVRG 465
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A +L EM + P+ + GAL+ G + ++ V + M + ++YN
Sbjct: 466 EVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYN 525
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
V I LCK R + AK LL EML + ++P+ Y+ I GF + +A+K + M
Sbjct: 526 VLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEK 585
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMKSLVTGLAGASKVSE 374
G + Y M+ CK G A+ C S+ K G +P+ T +L+ G A +
Sbjct: 586 GGYRDIVAYNAMIKGYCKSGMMNEAV-MCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKA 644
Query: 375 A-KELIGLVKEKFTKNVDTWNEIEAG 399
A + L ++K + N+ T+ + G
Sbjct: 645 ALRFLCDMMKRRCKPNIVTYASLICG 670
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM+ + +V + A++ L D +++ + E K G+ P++ YN VI A C
Sbjct: 334 LGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEM-KERGLSPNVQIYNTVIYALC 392
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +S A ++L +M P+ +F L+A F +E E+ K+L+ R ++
Sbjct: 393 KCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQL 452
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y IH C + A LL EM+ +G P+ VT I+G G +EA M
Sbjct: 453 SYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKM 512
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ + P++++Y ++ +CK A E + + P+ +L+ G + K+
Sbjct: 513 AERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKL 572
Query: 373 SEAKELIGLVKEK 385
S+A+++ ++EK
Sbjct: 573 SDARKIFEFMEEK 585
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD + YN +I C+ S+A ++L EM + ++P+ + L+ GF + +K D
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDAR 576
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + ME G + YN I CK EA + M G P+ TY+ I G+
Sbjct: 577 KIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGY 636
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G+ + A +F M PN Y +++ C G+ ++A ++G PN
Sbjct: 637 AKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNV 696
Query: 357 TTMKSLVTGLAGASKVSEA 375
L+ L K +A
Sbjct: 697 VHYTVLIGSLFKKDKAIQA 715
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG--ALVAGFYKEEKY 232
+G PD NR+++ + A + EM + + A + +V G E +
Sbjct: 233 HGALPDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRV 292
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ ++++ G G YNV I C+ LL EM KG+ P VTY
Sbjct: 293 EEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAI 352
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I+ + + + + M GLSPN +Y T++Y +CK AL + +A +
Sbjct: 353 IHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRF 412
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T +L+ V EA +L+
Sbjct: 413 DPDVVTFNTLIAAFCREGDVEEALKLL 439
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 133/310 (42%), Gaps = 18/310 (5%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEM 136
+++ I+ L + + L E+ + +Q ++F ++I + +++ A + F+ M
Sbjct: 524 YNVLISGLCKKRMLSAAKNLLVEMLEQ-KVQPDKFVYTTLIDGFIRSDKLSDARKIFEFM 582
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+E + A+NA++ + E K G PD TY +I + + D
Sbjct: 583 EEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKV-GCIPDEFTYTTLIDGYAKKGD 641
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+A L +M ++ KPN ++ +L+ G+ + + M+ G+ V Y V
Sbjct: 642 IKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTV 701
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF--CKDG-------NFEEAKK 307
I SL K K +A A + ML PN T + + G C+ G + ++A K
Sbjct: 702 LIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHK 761
Query: 308 ------FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++ + + GL P S Y +++ +C+ A+ ++ KG +P+ T S
Sbjct: 762 KSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLS 821
Query: 362 LVTGLAGASK 371
L+ G + K
Sbjct: 822 LLYGFSSVGK 831
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ EM ++ +V + + L +E +++F E K +G+ P+L TY+ +I
Sbjct: 254 KLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMF-ELMKIHGVVPNLYTYSAMIDG 312
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ + AY + E+ + PN FG LV GF K + + M ++G+
Sbjct: 313 YCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPN 372
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +YN IH CK EA LL EM S + P+ TY+ I G C + EA + ++
Sbjct: 373 LYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQ 432
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N + P+S Y ++++ CK + E AL C E + G PN T +L+ G
Sbjct: 433 RMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYC--- 489
Query: 371 KVSEAKELIGLVKEKFTKNV 390
KV K +GL E K +
Sbjct: 490 KVRNIKAAMGLYFEMTIKGI 509
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 5/323 (1%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
S EK+L+ + + P ++ ++I I L N + E +K + N
Sbjct: 250 SKKEKLLDEMTSLGVKPNVYI----YTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYT 305
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ I Y + A +KE+ +L +V F L+ A++ + +F+
Sbjct: 306 YSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMV 365
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K +G+ P+L YN +I C+S + A +L+EM+ ++ P+ ++ L+ G EE+
Sbjct: 366 K-FGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERL 424
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ N++ Q M+ + YN IH CK +A L EM S G++PN +T+S
Sbjct: 425 AEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTL 484
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+CK N + A Y M+ G+ P+ Y T++ K + + AL + + G
Sbjct: 485 IDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGI 544
Query: 353 VPNFTTMKSLVTGLAGASKVSEA 375
PN T LV G ++S+A
Sbjct: 545 HPNDHTFACLVDGFWKEGRLSDA 567
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ Y+ + + + S +L EM +KPN + + +E K E+
Sbjct: 228 GLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEA 287
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ ++M+ +G+ + Y+ I CK +A L E+L + PN V + + G
Sbjct: 288 EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDG 347
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK A+ + M G+ PN VY +++ CK G+ A+G E + P+
Sbjct: 348 FCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPD 407
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
T L+ GL +++EA L +K E+ + T+N + G
Sbjct: 408 VFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGF 453
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 4/235 (1%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
R+F K + ++ +I F E A + EM P++ + A++ G
Sbjct: 151 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREM---RCSPDSKACLAILNG 207
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ +++ V Q+M G+ V +Y+V K ++ + LLDEM S G+KPN
Sbjct: 208 LVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPN 267
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
Y+ +I C++ EEA+K + +M G+ PN Y M+ CK G+ A G K
Sbjct: 268 VYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYK 327
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
E + +PN +LV G A ++ A+ L + +VK N+ +N + G
Sbjct: 328 EILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHG 382
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
D + S+G F+ L++ +++ V + PD ++
Sbjct: 158 DIQSPKFSIGVFSLLIMEFLEMGLFEDALWV----SREMRCSPDSKACLAILNGLVRRRR 213
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
S + M + + P+ + L +K+ K+L M G+K V +Y +
Sbjct: 214 FDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTI 273
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I LC+ K EA+ + + M G+ PN TYS I G+CK GN +A Y+ + +
Sbjct: 274 YIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAE 333
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L PN V+ T+V CK + A + G PN L+ G + + EA
Sbjct: 334 LLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEA- 392
Query: 377 ELIGLVKEKFTKNV 390
+GL+ E + N+
Sbjct: 393 --MGLLSEMESLNL 404
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 48/263 (18%)
Query: 112 FHAHSIILYGQA---NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+ ++ +++GQ NM E A+ EM+ L V + L+ L + E R+F
Sbjct: 373 LYVYNCLIHGQCKSGNMLE-AMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLF 431
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ K I P TYN +I FC+ + A + +EM ++PN +F L+ G+ K
Sbjct: 432 -QRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCK 490
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS-- 286
+ + M G+ V Y I + K EA L +ML G+ PN
Sbjct: 491 VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550
Query: 287 -----------------------------------------VTYSHFIYGFCKDGNFEEA 305
V ++ I G C++G A
Sbjct: 551 FACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRA 610
Query: 306 KKFYRIMSNSGLSPNSSVYFTMV 328
+F+ M + G++P+ Y +M+
Sbjct: 611 SRFFSDMKSGGVTPDIWSYVSML 633
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 131/251 (52%), Gaps = 1/251 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T AV+ +K++ E + ++ FN+L+ I + + +R+ ++ K +G++P+ TY
Sbjct: 542 TREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRL-LDTIKLHGLEPNAVTYT 600
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +CE + S +L+EM K+I P ++ ++ G K+ K ++ ++L+ M+
Sbjct: 601 TLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAV 660
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN I + CK R +A L D+ML ++P SVTY+ I GFC G+ ++A
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ N ++ N Y T++ C GD + A+ + ++ + KG+ + +++
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780
Query: 366 LAGASKVSEAK 376
L V+EAK
Sbjct: 781 LCKRCLVTEAK 791
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 144/324 (44%), Gaps = 11/324 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D + ++I NG ++++ + N +++++ G + E A++
Sbjct: 350 DMVTYNILAKGFRLLGLINGAWNIIQKMLIKG--PNPNLVTYTVLICGHCQIGNVEEALK 407
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+KEM H + S+ + LL +L ++ ++F E G++PDL TY+ +I
Sbjct: 408 LYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEAN-GLRPDLITYSTLIHGL 466
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A + +M I PN+ GA++ G ++ K + + +
Sbjct: 467 CKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDI 526
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+YN+ I K EA L ++ KG+ P VT++ +YGFC + +A++
Sbjct: 527 ILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDT 586
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ GL PN+ Y T++ C+ G+ ++ L E AK P T ++ GL K
Sbjct: 587 IKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646
Query: 372 VSEAKEL------IGLVKEKFTKN 389
+ E+ +L +GL ++ + N
Sbjct: 647 LQESCQLLEDMDAVGLTPDQVSYN 670
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A F M +H L ++N L+ L IA E + + + +G++P
Sbjct: 291 YCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDM-ENHGLEP 349
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN + K F + A++I+ +M K PN ++ L+ G + E+ K+
Sbjct: 350 DMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLY 409
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M +G + + V + SLCK R+ A L EM + G++P+ +TYS I+G CK
Sbjct: 410 KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC--------------------------- 332
G ++A Y M ++ + PNS ++ ++ +C
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529
Query: 333 --------KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
K G+ A+ K+ KG P T SL+ G K+S+A+ L+ +K
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 4/276 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RPDL H + G+ + A+ +++M +++ + A+L+ L K
Sbjct: 453 RPDLITYSTLIHGLCKQGEV---QQAILLYEKMCSNRIIPNSLIHGAILMGLC-EKGKIS 508
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
R++ ++ T + D+ YN +I + + ++ A + ++ K I P +F +L+
Sbjct: 509 QARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF K ++L ++ +G++ Y ++ C+ LL EM +K +
Sbjct: 569 YGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG 628
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P +TY+ I G CK +E+ + M GL+P+ Y T++ CK D A
Sbjct: 629 PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQL 688
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + P T L+ G + +A L+
Sbjct: 689 YDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLL 724
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 116/309 (37%), Gaps = 51/309 (16%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKD-YKEVKRVFIEFPKTY 175
Y ++ M A+ +M + S+ +N+LL L I D Y E+K
Sbjct: 189 YSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIK--------VS 240
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G T + V+ C S A + + K +P+ SF +++ + K +
Sbjct: 241 GTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVA 300
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL---------------------- 273
MM ++G+ YN+ IH LC EA L
Sbjct: 301 KSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKG 360
Query: 274 -------------LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ +ML KG PN VTY+ I G C+ GN EEA K Y+ M + G +
Sbjct: 361 FRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLS 420
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
++ +CK + A E A G P+ T +L+ GL +V +A
Sbjct: 421 IISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAI---- 476
Query: 381 LVKEKFTKN 389
L+ EK N
Sbjct: 477 LLYEKMCSN 485
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD +YN +I+AFC++ D A+ + +M +++P + ++ L+ GF +D
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L ++ + Y I + C +A +M+ KG + + YS I
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
CK EAK F+ +M + G+ P+ ++ ++ + G + E I GW+
Sbjct: 781 LCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 115/270 (42%), Gaps = 17/270 (6%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
S ++L+ + L P + + ++ +N E + + L E+K +
Sbjct: 578 SQARRLLDTIKLHGLEPNA----VTYTTLMNVYCEEGNMQSLLELLSEMKAKA--IGPTH 631
Query: 113 HAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+++++ G + + + ++MD L ++N ++ A A+D ++ +++ +
Sbjct: 632 ITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDK 691
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ ++P TYN +I FC D A ++L + + + N ++ ++ +
Sbjct: 692 M-LLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAK- 749
Query: 231 KYEDVNKVL----QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
DV+K + QM+E+ G + + Y+ I LCK EAK MLS G+ P+
Sbjct: 750 --GDVDKAVVYFRQMVEK-GFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQ 806
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ + F + G+ + M SG
Sbjct: 807 DLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 7/317 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D + F+ IN L + E+ R N + I + T AV
Sbjct: 160 HPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVD 219
Query: 132 TFKEMDEHKLRHSVGAFNALLLALT---IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
FK+M+++ + +V ++ ++ +L + D E +E GI P++ TYN ++
Sbjct: 220 VFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE----RGIPPNVFTYNSIV 275
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC + A + EM + + PN +F LV G KE + V + M G++
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVE 335
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+S YN + C R EAK + + M+ KG P + +Y+ I G+CK +EAK
Sbjct: 336 PDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSL 395
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + L+P++ Y T++ +C+ G + AL KE + G PN T L+ G
Sbjct: 396 LAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCK 455
Query: 369 ASKVSEAKELIGLVKEK 385
+ EA +L+ +KEK
Sbjct: 456 HGHLDEALKLLKSMKEK 472
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ A+ EM E + +V +N+++ E R+F E + P+ T+
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR-DVMPNTVTF 306
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
++ C+ S A + M K ++P+ S++ AL+ G+ + + KV ++M R
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G G YN+ I+ CK R+ EAK+LL EM K + P++VTYS + G C+ G +E
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A ++ M + G PN Y ++ CK G + AL K K PN L+
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G+ A K+ AKEL L + ++ T+ + GL
Sbjct: 487 GMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 139/331 (41%), Gaps = 8/331 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L + N ++L E+ R P++ H GQ N A R
Sbjct: 234 VTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLN---EATRL 290
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FKEM + + F L+ L E + VF E G++PD+ TYN ++ +C
Sbjct: 291 FKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVF-ETMTEKGVEPDISTYNALMDGYC 349
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + M RK P A S+ L+ G+ K + ++ +L M +
Sbjct: 350 LQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTV 409
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ + LC+L + EA L EM S G PN VTY + GFCK G+ +EA K + M
Sbjct: 410 TYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM 469
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
L PN Y ++ M G E A + G P+ T ++ GL
Sbjct: 470 KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLS 529
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
EA +L + + F N ++N + G Q
Sbjct: 530 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 560
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
V +MD ++ H+V + N L+ L V + K GI PD T+N +I
Sbjct: 112 VVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFK-LGIHPDAITFNALI 170
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A + EM ++ +PN S+ ++ G K V + ME+ G K
Sbjct: 171 NGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCK 230
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I SLCK R +A L EM+ +G+ PN TY+ ++GFC G EA +
Sbjct: 231 PNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL 290
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M + PN+ + +V +CK G A + KG P+ +T +L+ G
Sbjct: 291 FKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCL 350
Query: 369 ASKVSEAKELIGLVKEK 385
++EAK++ ++ K
Sbjct: 351 QRLMNEAKKVFEIMIRK 367
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 2/270 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M A F+ M E + + +NAL+ + + E K+VF E G P +Y
Sbjct: 318 MVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF-EIMIRKGCAPGAHSY 376
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I +C+S A S+LAEM K++ P+ ++ L+ G + + ++ + + M
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS 436
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG + Y + + CK EA LL M K ++PN V Y+ I G G E
Sbjct: 437 YGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEV 496
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
AK+ + + G P+ Y M+ + K G + A ++ G++PN + ++
Sbjct: 497 AKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 556
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
G S A LI +V ++F+ N+ T+
Sbjct: 557 GFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R + +P+ FG + F K+++Y V + M+ + + V N+ I+ LC+L
Sbjct: 84 MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+ ++L +M G+ P+++T++ I G C +G +EA + + M G PN Y T
Sbjct: 144 VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTT 203
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
++ +CK G+ A+ K+ G PN T +++ L V++A E + +V+
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263
Query: 386 FTKNVDTWNEIEAGL 400
NV T+N I G
Sbjct: 264 IPPNVFTYNSIVHGF 278
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A + F+ M ++N L+ ++ E K + E + P
Sbjct: 348 YCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHK-ALNP 406
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY+ +++ C+ A ++ EM PN ++ L+ GF K ++ K+L
Sbjct: 407 DTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLL 466
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ ++ + Y + I + K AK L ++ G +P+ TY+ I G K+
Sbjct: 467 KSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKE 526
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA +R M + G PNS Y M+ + D TA+ E + K + N +T
Sbjct: 527 GLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586
Query: 360 KSLV 363
+ L+
Sbjct: 587 QMLL 590
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 148/330 (44%), Gaps = 9/330 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D + ++ + A + + + ++ PD + ++ ++ G T +A+
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMPVEPD-----AYTYNTLIRGLCGRGRTSNALA 187
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
++M V + LL A YK+ ++ E G PD+ TYN V+
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM-HDKGCAPDIVTYNVVLNGI 246
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A L + +PN S+ ++ G + E++ED K+++ M G V
Sbjct: 247 CQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNV 306
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+N+ I LC+ A +L++M G PNS++Y+ ++ FCK +A +F +
Sbjct: 307 VTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G P+ Y T++ +C+ G+ + A+ + KG P + +++ GL A K
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ + + ++ T++ I +GL
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGL 456
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 16/313 (5%)
Query: 91 FNGISQ------YLEELKTRPDLQNE-RFHAHSIILYG--QANMTEHAVRTFKEMDEHKL 141
NGI Q +E LK P E +++I+L G A E A + +EM
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+V FN L+ L + V + P+ YG P+ +YN ++ AFC+ A
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ-YGCTPNSLSYNPLLHAFCKQKKIHKAM 361
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+ M + P+ S+ L+ + + + ++L ++ G + YN I L
Sbjct: 362 EFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGL 421
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
K K EA LLDEM SKG++P+ +TYS G C++ EEA + + + + G+ P +
Sbjct: 422 TKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTA 481
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-- 379
++Y ++ +CK + A+ I+ G +PN +T LV GLA V EA+EL
Sbjct: 482 ALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541
Query: 380 ----GLVKEKFTK 388
G+V +K K
Sbjct: 542 LCSRGVVNKKLMK 554
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+VG AL+ L + + +RV PD+ YN ++ +C + +A +
Sbjct: 103 AVGPCAALIKKLCASGRTADARRVLA------ASGPDVMVYNAMVAGYCGAGQLDAARRL 156
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+A+M ++P+A ++ L+ G + + VL+ M R G V Y + + + CK
Sbjct: 157 VADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCK 213
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+A LLDEM KG P+ VTY+ + G C++G E+A +F + + + G PN+
Sbjct: 214 RSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVS 273
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y ++ + +E A +E KG PN T L++ L V A E++
Sbjct: 274 YNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVL 329
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 8/272 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I + L A + + +EE+ + N I + + E A+ ++
Sbjct: 272 VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ 331
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ + ++N LL A K + F+E + G PD+ +YN ++ A C +
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAME-FVELMVSRGCYPDIVSYNTLLTALCRNG 390
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A +L ++ K P S+ ++ G K K ++ ++L M G++ + Y+
Sbjct: 391 EVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYS 450
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
LC+ + EA ++ G++P + Y+ + G CK A + M +S
Sbjct: 451 TIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISS 510
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
G PN S Y +V +G YE G KE+
Sbjct: 511 GCMPNESTYTILV----EGLAYE---GLVKEA 535
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I LC + A+A+ +L P+ + Y+ + G+C G + A+ R++++ +
Sbjct: 111 IKKLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQLDAAR---RLVADMPV 162
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P++ Y T++ +C G AL ++ +G +P+ T L+ S +A +
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222
Query: 378 LIGLVKEK-FTKNVDTWNEIEAGLPQ 402
L+ + +K ++ T+N + G+ Q
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQ 248
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 154/384 (40%), Gaps = 59/384 (15%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR-PDLQNERFHAHSIILYGQANMTEHAVR 131
LD A+ I LS F + +EE++ P L + + + A M AV+
Sbjct: 128 LDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQ 187
Query: 132 TFKEM-------DEH---------------------------KLRHSVGAFNALLLALTI 157
EM DE+ + + SV F +LL
Sbjct: 188 VLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWCK 247
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E K V ++ K GI+PD+ YN ++ + ++ AY +L EM RK +PNA+
Sbjct: 248 EGKLMEAKHVLVQM-KDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNAT 306
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S+ L+ K E+ E+ +V M+R G ++ + Y+ I CK K LLDEM
Sbjct: 307 SYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEM 366
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ +G PN V Y H + K EE K+ M G +P+ S+Y T++ CK G+
Sbjct: 367 IQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEV 426
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA----KELIG------------- 380
+ + E + G P+ T ++ G + EA KE++G
Sbjct: 427 KEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLK 486
Query: 381 ------LVKEKFTKNVDTWNEIEA 398
L EK D WN I A
Sbjct: 487 ELMNSLLRAEKLEMAKDAWNCITA 510
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 155/341 (45%), Gaps = 23/341 (6%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG-------QANMTEH 128
+ ++ IN L ++N + EEL ER H ++ Y +A E
Sbjct: 38 VTYNTIINGLCKSNDLGAGMELFEELV-------ERGHHPDVVTYNTLIDSLCKAGDLEE 90
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDLDTYNRV 187
A R +M +V ++ L+ L E + + E K+ + P++ TYN
Sbjct: 91 ARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 150
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIK--PNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+ C+ S ++ A ++ + S++ P+ +F L+ G K + ++ V M
Sbjct: 151 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 210
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN ++ LCK K A A+++ M+ KG+ P+ +TYS + FCK +EA
Sbjct: 211 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 270
Query: 306 KKFYRIMSNSGLSPNSSV-----YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ M++ G +PN V + ++ CK G++E A +E +AK P+ T
Sbjct: 271 LELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 330
Query: 361 SLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
+L+ GL A +V A++++ L+ NV T+N + GL
Sbjct: 331 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 371
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +N +L +L A D +F G+ P + TYN +I C+S+D + +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
E+ + P+ ++ L+ K E+ ++ M G V Y+V I+ LCK+
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 265 RKCAEAKALLDEMLSKGMK--PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL--SPN 320
+ EA+ L+ EM K PN +TY+ F+ G CK EA + R + + L SP+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI- 379
+ + T++ +CK G + A + IA G+VPN T +LV GL A K+ A +I
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 380 GLVKEKFTKNVDTWN 394
+V + T +V T++
Sbjct: 241 SMVDKGVTPDVITYS 255
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD T+N +I C++ + A ++ EM K+++P+ +FGAL+ G K + E +
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L +M G+ V YN +H LCK + EA L+EM+S G P+S+TY +Y C+
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
++A + + + G P++ Y +V + K G E A+ +E + KG P+ T
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +GL + ++ EL+ +V K
Sbjct: 469 FAACFSGLHRSGNLAGTMELLRVVLAK 495
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 131/278 (47%), Gaps = 6/278 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEH 128
D + +S+ ++ +A+ + + L + +R P++ +I++ G +A E
Sbjct: 250 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQ 309
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F+EM L+ V F AL+ L A E R ++ G+ P++ TYN ++
Sbjct: 310 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV-EAARDILDLMGNLGVPPNVVTYNALV 368
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+S A L EM P++ ++G+LV + + +D +++ ++ +G
Sbjct: 369 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 428
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN+ + L K K +A +L+EM+ KG +P+S T++ G + GN +
Sbjct: 429 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMEL 488
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
R++ G+ P+++ +++ ++C+ G + KE
Sbjct: 489 LRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALL-DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V+ YN+ + SLC+ A A + EM G+ P VTY+ I G CK + + +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ G P+ Y T++ +CK GD E A + ++G VPN T L+ GL
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 370 SKVSEAKELIGLVKEK---FTKNVDTWNEIEAGL 400
++ EA+ELI + K N+ T+N GL
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G T+ A +M++ KL V +N ++ L K +
Sbjct: 218 QPDLVTYGVVVNGLCKRGD---TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GI+P++ TY+ +I C S A +L++M + I P+ +F AL+
Sbjct: 275 ALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VTY+ I GFCK EE + +R MS GL N+ Y ++ + + GD + A
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
KE ++ G PN T +L+ GL K+ +A + L + K + T+N + G+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
L ++ I+ L + + + +E++T RP++ + YG+ + A R
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRL 313
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M E K+ V F+AL+ A E ++++ E K I P + TY+ +I FC
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFC 372
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A + M K P+ ++ L+ GF K ++ E+ +V + M + G+
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ I L + C A+ + EM+S G+ PN +TY+ + G CK+G E+A + +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGS 551
Query: 372 VSEAKELIGLVKEKFT 387
EA L +KE T
Sbjct: 552 KEEADALFKEMKEDGT 567
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F EM + + S+ F+ LL A IAK K +V E + GI + TY+
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC S A ++L +M + +PN + +L+ G+ ++ + ++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +N IH L K +EA AL+D M++KG +P+ VTY + G CK G+ + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M L P +Y T++ +CK + AL KE KG PN T SL++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K +V T++ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + AV +M + + FN L+ L + E I+ G +P
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA-MALIDRMVAKGCQP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D+ A+++L +M++ ++P + ++ G K + +D +
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLC-----------------------------------KL 264
+ ME G++ V Y+ I LC K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA+ L DEM+ + + P+ VTYS I GFC +EAK+ + M + P+ Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVK 383
T++ CK E + +E +G V N T L+ GL A A+E+ +V
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 384 EKFTKNVDTWNEIEAGL 400
+ N+ T+N + GL
Sbjct: 460 DGVPPNIMTYNTLLDGL 476
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+ M V +N L+ K +E VF E + G+ + TYN
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNI 436
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I EM + PN ++ L+ G K K E V + ++R
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KP+ V Y+ I GFC+ G+ EEA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 615
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ T + ++ +C S S A +++ +M +PN +F L+ G + K +
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + + Y V ++ LCK A LL++M ++P + Y+ I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I + P+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ EA++L +VK ++ T++ + G
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 5/265 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L + + AV + E ++ + N +LL L + + R+F + P
Sbjct: 137 LLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----- 191
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ T+N +I C+ D + A ++LA M P+ ++ +L+ G+ K + E+V K+
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G + V YN ++ CK + A + EM +G+ N VT+S F+ FCK
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G EA K + M G+ PN Y +V CK G + AL E + +G N T
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 359 MKSLVTGLAGASKVSEAKELIGLVK 383
LV GL KV+EA+++ L++
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLME 396
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +N+L+ + +EV+++ E + G +PD+ TYN ++ FC+ AYS
Sbjct: 229 VVTYNSLIDGYGKCGELEEVEKLVGEM-RGCGCRPDVVTYNALVNCFCKFGRMERAYSYF 287
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
AEM R+ + N +F V F K + K+ M GMK Y + CK
Sbjct: 288 AEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKA 347
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A L +EM+ +G+ N VTY+ + G CK+G EA+ +R+M +G+ N +Y
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLY 407
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
T+++ + E AL E KG + + +L+ GL K+ EAK L+ + E
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 5/299 (1%)
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
RPD+ + +G+ E A F EM + +V F+ + A +
Sbjct: 260 CRPDVVTYNALVNCFCKFGR---MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E ++F + + G+KP+ TY ++ C++ A + EM ++ + N ++ L
Sbjct: 317 EAMKLFAQM-RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
V G KE K + V ++MER G+++ +Y IH + A +LL EM KGM
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
+ + Y I+G C +EAK M GL PN+ +Y ++ K A+
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
++ + G+ PN T +LV GL A + EA +V NV + + GL
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A+ EM + + +V + L+ L E + VF + GI+ +
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVF-RLMERAGIRANE 404
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y +I +S A S+L+EM K ++ + S +GAL+ G +K ++ +L
Sbjct: 405 LLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNK 464
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ G+K +Y + + K RK +EA ALL +M+ G +PN VTY + G CK G+
Sbjct: 465 MDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS 524
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA + M + GL PN Y +V +CK G + A+ E I KG + S
Sbjct: 525 IDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTS 584
Query: 362 LVTG 365
L+ G
Sbjct: 585 LMDG 588
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+E A+ EM + + V + AL+ L + E K + + + G+KP+ Y
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDEC-GLKPNNVIYT 478
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ A ++ S A ++L +M +PN ++ ALV G K ++ M
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V Y + LCK + +A LLDEM+ KGM ++V + + G K GN ++A
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDA 598
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M NSGL + Y V+ C + A E I G P+ L+
Sbjct: 599 FALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINK 658
Query: 366 LAGASKVSEAKEL 378
+ EA L
Sbjct: 659 CQKLGNMEEAAIL 671
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 2/264 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F+ M+ +R + + L+ + K+ + + E K G++ D+ Y +I
Sbjct: 391 VFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM-KDKGMELDVSLYGALIWGL 449
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C A S+L +MD +KPN + ++ +K K + +LQ M G + +
Sbjct: 450 CNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNI 509
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y + LCK EA + ++M+ G++PN Y+ + G CK+G ++A
Sbjct: 510 VTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDE 569
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G+S ++ V +++ K G+ + A + I G + V G +
Sbjct: 570 MIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNM 629
Query: 372 VSEAKELIG-LVKEKFTKNVDTWN 394
+ EA+E++ +++ T + +N
Sbjct: 630 IQEAREVLSEMIENGITPDAVVYN 653
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 4/185 (2%)
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
LA + + PN + ++ +E E ++ + + V +N+ I LCK
Sbjct: 151 LARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCK 206
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
AEA+ALL M + G P+ VTY+ I G+ K G EE +K M G P+
Sbjct: 207 EGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVT 266
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +V CK G E A + E +G + N T + V V EA +L ++
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMR 326
Query: 384 EKFTK 388
K K
Sbjct: 327 MKGMK 331
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 139/315 (44%), Gaps = 11/315 (3%)
Query: 95 SQYLEELKTRPDLQNERFH----AHSIILYG---QANMTEHAVRTFKEMDEHKLRHSVGA 147
+ LE L + E F A++ +++G M E AV +M+ + +V
Sbjct: 333 GRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGE-AVSVSSKMERNGCSPNVST 391
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ AL+ A D ++ + T G P++ Y ++ C SS S A+S++ +M
Sbjct: 392 YGALIDGFAKAGDLVGASEIWNKM-MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKM 450
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ PN +F + G + E + ME+YG + YN + L K +
Sbjct: 451 STDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRI 510
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA L+ EM KGM+ N VTY+ GFC G FEEA K M G+ P++ Y T+
Sbjct: 511 KEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTL 570
Query: 328 VYFMCKGGDYETALGFCKESIAKG-WVPNFTTMKSLVTGLAGASKVSEAK-ELIGLVKEK 385
Y C G +TA+ + A G WVP SL+ G+ V EA L ++ E
Sbjct: 571 TYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEG 630
Query: 386 FTKNVDTWNEIEAGL 400
N TWN + GL
Sbjct: 631 ICLNAATWNALVRGL 645
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 21/331 (6%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFK 134
++I + L + N +G + L E+ + PD ++ Y + + +
Sbjct: 187 YNILLKALCKNNRVDGACKLLVEMSNKGCEPD----------VVSYTTVISSMSKLGKVE 236
Query: 135 EMDEHKLRH--SVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTYNRVIKA 190
E E +R +V +NAL+ ++YK VK VF+ + GI P++ TY+ VI +
Sbjct: 237 EARELSIRFQPNVSVYNALINGF--CREYK-VKEVFLLLGQMVEKGIDPNVITYSTVISS 293
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ A ++ A+M + PN +F +L+ G++ + + + M G +
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPN 353
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN IH LC K EA ++ +M G PN TY I GF K G+ A + +
Sbjct: 354 VVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN 413
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M +G PN VY +MV +C+ + A ++ PN T + + GL +
Sbjct: 414 KMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG 473
Query: 371 KVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
+V A L +++ + N+ T+NE+ GL
Sbjct: 474 RVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 31/259 (11%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI D + VI + + A + + +P + L+ E ++
Sbjct: 106 KLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRF 165
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + + M+R G + V YN+ + +LCK + A LL EM +KG +P+ V+Y+
Sbjct: 166 QMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTV 225
Query: 293 IYGFCKDGNFEEAKKF---------------------YRI---------MSNSGLSPNSS 322
I K G EEA++ Y++ M G+ PN
Sbjct: 226 ISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVI 285
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-L 381
Y T++ + G+ E AL + +G PN T SL+ G +V EA + +
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345
Query: 382 VKEKFTKNVDTWNEIEAGL 400
+E F NV +N + GL
Sbjct: 346 AEEGFEPNVVAYNTLIHGL 364
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I+ D +L +M + I + F ++ + + E K+ +
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+G + V +YN + ++ + + + M G +PN TY+ + CK+
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ A K MSN G P+ Y T++ M K G E A ++ + PN + +L
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-----RELSIRFQPNVSVYNAL 255
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ G KV E L+G +V++ NV T++ + + L
Sbjct: 256 INGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ K+ + ++ ++ +E + V +LQ M+ G+ ++ I++ ++
Sbjct: 71 NSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLA 130
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A + + G +P Y+H + + F+ + Y M G PN Y +
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNIL 190
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ +CK + A E KG P+ + ++++ ++ KV EA+EL +F
Sbjct: 191 LKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL----SIRFQ 246
Query: 388 KNVDTWNEIEAG 399
NV +N + G
Sbjct: 247 PNVSVYNALING 258
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 5/315 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT--F 133
+ F+ IN L + F + +++ R ++ + ++ I+ G + E A+ F
Sbjct: 46 VTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDD--YTYTTIINGLCKIGETALAAGLF 103
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K+M+E + +V ++ L+ +L + E +F + K I P + TY +I+ C
Sbjct: 104 KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF-SYMKAKDISPTIFTYTSLIQGLCN 162
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A ++L EM +I PN +F LV F KE K VL+ M G++ V
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN ++ + EA+ L D M++KG KP+ +YS I G+CK +EAK+ + M
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G +PN+ Y T+++ +C+ G A K G +PN T L+ G +
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342
Query: 374 EAKELIGLVKEKFTK 388
+A L ++ + K
Sbjct: 343 KAFRLFRAMQSTYLK 357
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 6/221 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TYN ++ + ++ A + M K KP+ S+ L+ G+ K ++ ++
Sbjct: 215 GVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEA 274
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G YN IH LC+L + EA+ L M + G PN TY+ + G
Sbjct: 275 KQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDG 334
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK G +A + +R M ++ L PN +Y +V MCK G+ + A E G PN
Sbjct: 335 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPN 394
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
+++ GL + EA E G ++F+ NV
Sbjct: 395 VQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
K M E + V +N+L+ ++ + E +++F + T G KPD+ +Y+ +I +
Sbjct: 207 VLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF-DVMITKGCKPDVFSYSILINGY 265
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A + EM + PN S+ L+ G + + + + + M G +
Sbjct: 266 CKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNL 325
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y + + CK +A L M S +KPN V Y+ + CK GN ++A++ +
Sbjct: 326 YTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSE 385
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ GL PN +Y T++ +CK G + AL + G P+ + ++ G
Sbjct: 386 LFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKD 445
Query: 372 VSEAKELIGLVKEK 385
S A LIG ++++
Sbjct: 446 ESRAVHLIGEMRDR 459
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNA 150
G+ + + E+ PD+ ++ ++YG + TE A + F M + V +++
Sbjct: 206 GVLKTMTEMGVEPDVV-----TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI 260
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L+ AK E K++F E G P+ +YN +I C+ A + M
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQ-GSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN 319
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
PN ++ L+ GF K+ ++ + M+ +K + MYN+ ++++CK +A
Sbjct: 320 GNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDA 379
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ L E+ G++PN Y+ I G CK+G +EA + +R M + G P+ Y ++
Sbjct: 380 RELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTT 358
+ D A+ E +G++ + T
Sbjct: 440 FLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P + T+ +I + + A + +M + +P+ ++ ++ G K +
Sbjct: 40 GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + ME G + V Y+ IHSLCK R+ EA + M +K + P TY+ I G
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C ++EA M++ + PN + +V CK G A G K G P+
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
T SL+ G + ++V EA++L ++ K K
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCK 252
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ T N +I FC+ +S+LA+ + ++P +F L+ G K K+
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + Y I+ LCK+ + A A L +M G + N VTYS I+
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK EA + M +SP Y +++ +C ++ A E + +PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
T LV KV A+ ++ + E + +V T+N + G
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ + PN + L+ F + ++ + VL + G++ + + I+ L K+ K
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A+A L D+M+++G +P+ TY+ I G CK G A ++ M +G N Y T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
+++ +CK AL AK P T SL+ GL S+ EA L+ +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 386 FTKNVDTWN 394
NV T+N
Sbjct: 181 IMPNVVTFN 189
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 146/316 (46%), Gaps = 4/316 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A ++ + L E+ NE I + Q + E A+
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M EH V +NAL+ + +F P KP+ TY ++ C
Sbjct: 412 EQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLCN 467
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++AEM R PN +F LV+ F ++ E+ ++++ M +G +
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + + K +A LL ++SKG+ P+ +T+S I K+ EEA + + ++
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P + VY ++ +CK + + A+ F ++ G +PN +T L+ GLA +
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLK 647
Query: 374 EAKELIGLVKEKFTKN 389
EA++L+ ++ + N
Sbjct: 648 EAQDLLSVLCSRGVLN 663
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 34/301 (11%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ EM ++ +N ++ + + + + P +YG +PD +Y
Sbjct: 195 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLP-SYGFQPDTVSYTT 253
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++K C S + AEM K+ PN +F L+ F + E +VL+ M +G
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ ++ N+ I+S+CK + +A LL++M S G P++++Y+ + G C+ +++AK
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAK 373
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL-----------------------GF 343
+ M + PN + T + +C+ G E A+ GF
Sbjct: 374 ELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF 433
Query: 344 CKESIAKGWV---------PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
C + + PN T +L+TGL A ++ A EL+ +++ NV T+
Sbjct: 434 CVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493
Query: 394 N 394
N
Sbjct: 494 N 494
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ TY +++A C +S A ++L EM K PN ++ ++ G +E + +D
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L + YG + Y + LC ++ + + L EM+ K PN VT+ I
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + M+ G + N+++ ++ +CK G + A + + G P+
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + +AKEL+ +V+ N T+N
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFN 392
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 4/254 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A R + + V A+N L+ +R+ P + PD TY
Sbjct: 92 TSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP----VAPDAYTYT 147
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C+ + A S+L +M R+ +PN ++ L+ + +E VL M
Sbjct: 148 PLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAK 207
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YNV I+ +C+ + +A+ LL+ + S G +P++V+Y+ + G C +++
Sbjct: 208 GCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDV 267
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ + M PN + ++ F C+GG E A+ ++ G N T ++
Sbjct: 268 EELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINS 327
Query: 366 LAGASKVSEAKELI 379
+ +V +A +L+
Sbjct: 328 ICKQGRVDDAFKLL 341
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ ++I+ C +S A +L + + ++ LVAG+ + Y +
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR---YGHL 127
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +++ + Y I LC + A+A +LLD+ML +G +PN VTY+ +
Sbjct: 128 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++ FE+A M G +PN Y ++ MC+ G + A + G+ P+
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +L+ GL + + + +EL + EK
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEK 277
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A ++E+ ++ +V N ++ AL + + K F+ + G+ PD+ TYN
Sbjct: 78 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFPDVVTYN 136
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A+C A+ ++ M K +KP ++ A++ G K KY VL M +
Sbjct: 137 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
GM + YN+ + C+ +A+ + DEM S+G+ P+ V++S I K+G ++A
Sbjct: 197 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 256
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K++R M N+GL+P++ +Y ++ C+ G AL E + +G V + T +++ G
Sbjct: 257 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 316
Query: 366 LAGASKVSEAKELIGLVKEK 385
L +SEA EL + E+
Sbjct: 317 LCKEKMLSEADELFTEMTER 336
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 140/359 (38%), Gaps = 37/359 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+I IN L + +L +++ + + + I Y + + E A M
Sbjct: 99 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
L+ V +NA++ L Y K V E K G+ PD TYN ++ C + +
Sbjct: 159 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI-GMSPDTATYNILLVECCRNDN 217
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVA-------------------------------- 224
A I EM + + P+ SF AL+
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277
Query: 225 ---GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
GF + + KV M G V YN ++ LCK + +EA L EM +G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P+ T++ I G+ KDGN +A + +M L P+ Y T++ CKG + E
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ I++ PN + L+ G VSEA L +V++ F + T N I G
Sbjct: 398 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 165/371 (44%), Gaps = 14/371 (3%)
Query: 17 KHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESN-----PEKILEICRAAALTPES 71
K +YL +L K + S D + L++ N E+I + + + P
Sbjct: 179 KTGKYLRAKGVLDEMLKIGM-SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP-- 235
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
D ++FS I LS+ + +Y ++K + + I + + + A++
Sbjct: 236 --DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 293
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM E V +N +L L K E +F E + G+ PD T+ +I +
Sbjct: 294 VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGY 352
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMKSG 250
+ + + A ++ M ++++KP+ ++ L+ GF K + E VN++ M+ R +
Sbjct: 353 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 412
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+S Y + I+ C + +EA L DEM+ KG + +T + + G+C+ GN +A +F
Sbjct: 413 IS-YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 471
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+ P+ Y T++ K + + A + G +P+ T ++ G +
Sbjct: 472 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 531
Query: 371 KVSEAKELIGL 381
++ EA ELI L
Sbjct: 532 RMQEA-ELIML 541
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 10/292 (3%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PDL + F A I L + + A++ F++M L + L+ E
Sbjct: 235 PDLVS--FSAL-IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 291
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+V E + G D+ TYN ++ C+ S A + EM + + P+ +F L+
Sbjct: 292 LKVRDEMLEQ-GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 350
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G+ K+ + +MM + +K V YN I CK + + L ++M+S+ + P
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
N ++Y I G+C G EA + + M G T+V C+ G+ A F
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
+ KG VP+ T +L+ G + A L+ GL+ + T NV
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
F+ L+ A+ +E F K+ G+ ++ N ++ + A+ I E
Sbjct: 29 VFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ R ++ N + ++ K +K E+ L ME G+ V YN I++ C+
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L+D M KG+KP TY+ I G CK G + AK M G+SP+++ Y
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ C+ + A E ++G VP+ + +L+ L+ + +A
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 256
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 125/299 (41%), Gaps = 46/299 (15%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIIL 119
R L LD + ++ +N L + + + E+ R PD F+ + ++
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD-----FYTFTTLI 349
Query: 120 YG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE------ 170
G NM + AV F+ M + L+ V +N L+ + ++V ++ +
Sbjct: 350 NGYSKDGNMNK-AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408
Query: 171 FPK--TYGI--------------------------KPDLDTYNRVIKAFCESSDSSSAYS 202
+P +YGI + + T N ++K +C + ++ A
Sbjct: 409 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 468
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
L+ M K I P+ ++ L+ GF KEE + ++ ME G+ V YNV ++
Sbjct: 469 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 528
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+ + EA+ ++ +M+ +G+ P+ TY+ I G N +EA + + M G P+
Sbjct: 529 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N F LV + + K + + ++++ G+ ++ N + L K+ A +
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
E++ G++ N T + I CK+ E K F M G+ P+ Y T++ C+
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
G E A KG P T +++ GL K AK ++ ++K + + T+
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 394 N 394
N
Sbjct: 206 N 206
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 1/306 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ ++ L + + Q LE ++ R N ++ I + A F
Sbjct: 216 DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 275
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K M + +V +N+L+ + + E T G PD+ TYN +I C+
Sbjct: 276 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT-GCLPDIITYNTLIDGLCK 334
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A + +M K P+ ++ L+ GF K E+ + + M + + V
Sbjct: 335 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 394
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
++ + C +A+ LL+EM++ P+ TY+ + GFCK G EA++ + M+
Sbjct: 395 FSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 454
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G PN Y ++ C+ G A +E + G PN T +SL+ G G +
Sbjct: 455 KRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 514
Query: 374 EAKELI 379
EA++++
Sbjct: 515 EARKML 520
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 37/366 (10%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
E + + ++I I+ L +AN + Y ++K + + NE + I + + + A
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
KEM E L +V ++ ++ ++F + + G P+L TYN ++
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLS 120
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK-------YED-------- 234
C + AY +L EM + ++P+ S+ L+AG K K +ED
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 235 --------------------VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
K+ + M + V + + LCK + EA+ +L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+ M + PN +TYS I G CK G +A++ ++ M G+ PN Y ++++ C
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTW 393
++AL +E A G +P+ T +L+ GL + EA L G +K KF +V T+
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360
Query: 394 NEIEAG 399
+ + G
Sbjct: 361 SCLIGG 366
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G P+ TYN +I FC+ AY +L EM + PN ++ ++ GF ++ K
Sbjct: 34 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 93
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ K+ + M G + YN + LC+ EA LLDEM +G++P+ +Y
Sbjct: 94 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 153
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G CK G + A K + SN P+ Y T++ +CK G + A ++
Sbjct: 154 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSC 213
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
P+ T +L+ GL ++ EA++++ ++++ T NV T++ + GL
Sbjct: 214 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ + A EM E L+ +++ L+ L +VF E PD+ Y
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF-EDNSNGDCPPDVVAY 185
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ +I C++ A + +M S +P+ +F AL+ G K ++ ++ +VL+ ME
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
V Y+ I LCK + +A+ + M+ +G++PN VTY+ I+GFC +
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M+ +G P+ Y T++ +CK G A + AK P+ T L+
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
G ++ A+ L ++K+ +V T++ + G
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T+ +I C+++ A + A+M +K PN ++ L+ GF K K +L+ M
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G+ V Y+ IH C+ K A L +M+ G PN VTY+ + G C++G
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA + M GL P+ Y T++ +CK G + AL +++ P+ +L
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ GL ++ EA +L ++E + +V T+ + GL
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + A R +EM V + +L+ E +RV K G +P
Sbjct: 402 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR-GCQP 460
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY +I AFC + + AY +L EM ++PN ++ +L+ GF E+ K+L
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKML 520
Query: 240 QMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ +ER K+ + Y V + LC+ + + A LL+ + G P Y I G C+
Sbjct: 521 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 580
Query: 299 DGNFEEAKKFYRIMSNSGLS-PNSSVYFTMVYFMCKGGDYETA 340
+A + M+ S S PN+ Y ++ + + G +E A
Sbjct: 581 GKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A+ +M+ K+ V FN ++ +L + + +F E +T GI+P++ TY+
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 299
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C S A +L++M K I PN +F AL+ F KE K+ + K+ M +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN ++ C + +AK + + M+SK P+ VTY+ I GFCK E+
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R MS+ GL ++ Y T++ + GD + A K+ ++ G P+ T L+ G
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 366 LAGASKVSEAKEL 378
L K+ +A E+
Sbjct: 480 LCNNGKLEKALEV 492
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ I+ L + + + +E++T RP++ + YG+ + A
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DAS 315
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M E K+ ++ FNAL+ A + E ++++ + K I PD+ TYN ++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNG 374
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K P+ ++ L+ GF K ++ ED ++ + M G+
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L C A+ + +M+S G+ P+ +TYS + G C +G E+A + +
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + + +Y TM+ MCK G + FC S+ KG PN T ++++GL
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSK 553
Query: 370 SKVSEAKELIGLVKE 384
+ EA L+ +KE
Sbjct: 554 RLLQEAYALLKKMKE 568
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ FN LL A+ K + V + E + I L TYN
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG-EKMQRLEIVHGLYTYNI 125
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ G+ ++ D ++ M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + IH L K +EA AL+D M+ +G +PN VTY + G CK G+ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + + ++ T++ +CK + AL KE KG PN T SL++ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A +L+ ++++K N+ T+N +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D+ A ++L +M+ I+ + F ++ K +D +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G++ V Y+ I LC + ++A LL +M+ K + PN VT++ I F K+
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA+K Y M + P+ Y ++V C + A + ++K P+ T
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ G + +V + EL GLV + T
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I + +S A +++ M ++ +PN ++G +V G K +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V ++N I SLCK R +A L EM +KG++PN VTYS I
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G + A + I + P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SLV G ++ +AK++ +V + +V T+N + G
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L ++ SQ L ++ K P+L F+A + E A +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNALIDAFVKEGKFVE-AEKL 352
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ +M + + + +N+L+ + + K++F EF + PD+ TYN +IK FC
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGFC 411
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM + + + ++ L+ G + + ++ KV + M G+ +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + LC K +A + D M +K + Y+ I G CK G ++ + +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S G+ PN Y TM+ +C + A K+ G +PN T +L+
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 373 SEAKELI 379
+ + ELI
Sbjct: 592 AASAELI 598
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ + V ++ I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I K PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
T +L+ K EA++L ++K ++ T+N + G
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ A + M + P+ F L++ K +K++ V + + M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R + G+ YN+ I+ C+ + + A ALL +M+ G +P+ VT S + G+C
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G PN T +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL A L+ + K +V +N I
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 11/320 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANM--TEH 128
D + F+ IN L + F ++ ++ + +P + + ++ I+ G + T
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTV-----YTYTTIINGLCKIGETTA 218
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A FK+M+E + +V +N L+ +L K E +F + K I PD+ TYN +I
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIF-SYMKAKRISPDIFTYNSLI 277
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C A ++L EM +I PN +F LV KE K + V + M G++
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ ++ + EA+ L D M++KG KP++ +Y+ I G+CK +EAK+
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQL 397
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + GL+P++ Y T+++ +C+ G A K + G +P+ T L+ G
Sbjct: 398 FNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK 457
Query: 369 ASKVSEAKELIGLVKEKFTK 388
+ +A L +++ + K
Sbjct: 458 EGYLGKAFRLFRVMQSTYLK 477
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 17/326 (5%)
Query: 76 LAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAV 130
+ ++I I+ L + N I Y++ + PD+ F +S+I G N + A
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI----FTYNSLI-QGLCNFRRWKEAS 290
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
EM + ++ FN L+ A+ E + VF + G++PD+ TY+ ++
Sbjct: 291 ALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM-GVEPDVVTYSSLMYG 349
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + A + M K KP+A S+ L+ G+ K ++ ++ ++ M G+
Sbjct: 350 YSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPD 409
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN IH LC+L + EA+ L M S G P+ TYS + GFCK+G +A + +R
Sbjct: 410 NVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR 469
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+M ++ L P+ ++Y ++ MCK G+ + A E +G +PN +++ L
Sbjct: 470 VMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEG 529
Query: 371 KVSEAKELI------GLVKEKFTKNV 390
+ EA E G ++F+ NV
Sbjct: 530 LLDEALEAFRNMEGDGCPPDEFSYNV 555
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKL 141
K+SEA G+ + + E+ PD+ +S ++YG + E A + F M
Sbjct: 320 KVSEAQ---GVFKTMTEMGVEPDVV-----TYSSLMYGYSLRMEIVEARKLFDAMITKGC 371
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ ++N L+ AK E K++F E G+ PD YN +I C+ A
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQ-GLTPDNVNYNTLIHGLCQLGRLREAQ 430
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+ M P+ ++ L+ GF KE ++ ++M+ +K ++MYN+ I ++
Sbjct: 431 DLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM 490
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK +A+ L E+ +G+ PN Y+ I CK+G +EA + +R M G P+
Sbjct: 491 CKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDE 550
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
Y ++ + D A E +G+V
Sbjct: 551 FSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +F M + + F LL A+ Y + + G+ PD+ T +
Sbjct: 76 DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F A+S+ ++M + ++P+A +F L+ G K K+ + E G
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V Y I+ LCK+ + A L +M G +PN VTY+ I CKD EA
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M +SP+ Y +++ +C ++ A E + +PN T LV +
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315
Query: 367 AGASKVSEAK 376
KVSEA+
Sbjct: 316 CKEGKVSEAQ 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 36/263 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD T+N +I C+ + A + + +P ++ ++ G K +
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA 219
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCK-------------------------------- 263
+ + ME G + V YN+ I SLCK
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 264 ---LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
R+ EA ALL+EM S + PN T++ + CK+G EA+ ++ M+ G+ P+
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y +++Y + A I KG P+ + L+ G A ++ EAK+L
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399
Query: 381 -LVKEKFTKNVDTWNEIEAGLPQ 402
++ + T + +N + GL Q
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQ 422
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 214 PNASSFGALVAGFYKEEKYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P F L++ K +Y V + + ME G+ + ++ I L++ A +
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ +M+ G++P++VT++ I G CK G F +A +F+ SG P Y T++ +C
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVD 391
K G+ A G K+ G PN T L+ L V+EA ++ +K K + ++
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271
Query: 392 TWNEIEAGL 400
T+N + GL
Sbjct: 272 TYNSLIQGL 280
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G T+ A +M++ KL V +N ++ L K +
Sbjct: 832 QPDLVTYGVVVNGLCKRGD---TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 888
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GI+P++ TY+ +I C S A +L++M + I P+ +F AL+
Sbjct: 889 ALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 947
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 948 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 1007
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VTY+ I GFCK EE + +R MS GL N+ Y ++ + + GD + A
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
KE ++ G PN T +L+ GL K+ +A + L + K + T+N + G+
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 1125
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + N AV +M E + + A+NA++ +L K + F E + GI+P
Sbjct: 268 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRP 326
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY ++ C SS S A +L++M +K I PN ++ AL+ F K K + ++
Sbjct: 327 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 386
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + + Y+ I+ LC + EA + D M+SKG + V+Y+ I GFCK
Sbjct: 387 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 446
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K +R MS GL N+ Y T++ + GD + A F + G P+ T
Sbjct: 447 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 506
Query: 360 KSLVTGLAGASKVSEA 375
L+ GL ++ +A
Sbjct: 507 NILLGGLCDNGELEKA 522
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 7/260 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---TYGIKPDLDTYN 185
A+ F +M + + S+ FN LL A+ K Y V I K GI+ DL T+N
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD----VVISLGKKMEVLGIRNDLYTFN 227
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI FC S A SIL +M + +P+ + G+LV GF + + D ++ M
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + YN I SLCK ++ +A E+ KG++PN VTY+ + G C + +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M ++PN Y ++ K G A +E + P+ T SL+ G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 366 LAGASKVSEAKELIGLVKEK 385
L ++ EA ++ L+ K
Sbjct: 408 LCLHDRIDEANQMFDLMVSK 427
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
L ++ I+ L + + + +E++T RP++ + YG+ + A R
Sbjct: 871 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRL 927
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M E K+ V F+AL+ A E ++++ E K I P + TY+ +I FC
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFC 986
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A + M K P+ ++ L+ GF K ++ E+ +V + M + G+
Sbjct: 987 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ I L + C A+ + EM+S G+ PN +TY+ + G CK+G E+A + +
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGS 1165
Query: 372 VSEAKELIGLVKEKFT 387
EA L +KE T
Sbjct: 1166 KEEADALFKEMKEDGT 1181
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
DR+ +N N + ++ E+ +PD+ S+ + N A
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN---DAF 313
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FKE++ +R +V + AL+ L + + + R+ + K I P++ TY+ ++ A
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 372
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
F ++ A + EM R SI P+ ++ +L+ G ++ ++ N++ +M G +
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I+ CK ++ + L EM +G+ N+VTY+ I GF + G+ ++A++F+
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SP+ Y ++ +C G+ E AL ++ + + T +++ G+
Sbjct: 493 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
KV EA L + K K ++ T+ + +GL
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F EM + + S+ F+ LL A IAK K +V E + GI + TY+
Sbjct: 677 DDAVALFGEMVKSRPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC S A ++L +M + +PN + +L+ G+ ++ + ++ M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +N IH L K +EA AL+D M++KG +P+ VTY + G CK G+ + A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M L P +Y T++ +CK + AL KE KG PN T SL++
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K +V T++ +
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+ M V +N L+ K +E VF E + G+ + TYN
Sbjct: 992 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNI 1050
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I EM + PN ++ L+ G K K E V + ++R
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KP+ V Y+ I GFC+ G+ EEA
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 1170
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 1171 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 1229
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + AV +M + + FN L+ L + E I+ G +P
Sbjct: 775 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA-MALIDRMVAKGCQP 833
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D+ A+++L +M++ ++P + ++ G K + +D +
Sbjct: 834 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 893
Query: 240 QMMERYGMKSGVSMYNVRIHSLC-----------------------------------KL 264
+ ME G++ V Y+ I LC K
Sbjct: 894 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 953
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA+ L DEM+ + + P+ VTYS I GFC +EAK+ + M + P+ Y
Sbjct: 954 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 1013
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVK 383
T++ CK E + +E +G V N T L+ GL A A+E+ +V
Sbjct: 1014 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073
Query: 384 EKFTKNVDTWNEIEAGL 400
+ N+ T+N + GL
Sbjct: 1074 DGVPPNIMTYNTLLDGL 1090
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A + ++M + P+ F L++ K +KY+ V + + ME G+++ + +N+
Sbjct: 170 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 229
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I+ C + + A ++L +ML G +P+ VT + GFC+ +A M G
Sbjct: 230 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 289
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ +CK A F KE KG PN T +LV GL +S+ S+A
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349
Query: 378 LIG-LVKEKFTKNVDTWNEI 396
L+ ++K+K T NV T++ +
Sbjct: 350 LLSDMIKKKITPNVITYSAL 369
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ +N L ++ ++ ++ L ++ + N ++ + + + A F+E
Sbjct: 329 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 388
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +++L+ L + E ++F + + G D+ +YN +I FC++
Sbjct: 389 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAK 447
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ EM ++ + N ++ L+ GF++ + + M+ +G+ + YN
Sbjct: 448 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + LC + +A + ++M + M + VTY+ I G CK G EEA + +S
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 316 GLSPNSSVYFTMVYFMCKGG 335
GL P+ Y TM+ +C G
Sbjct: 568 GLKPDIVTYTTMMSGLCTKG 587
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ T + ++ +C S S A +++ +M +PN +F L+ G + K +
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + + Y V ++ LCK A LL++M ++P + Y+ I G
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I + P+
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L+ K+ EA++L +VK ++ T++ + G
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 984
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 11/241 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F M V ++N L+ AK ++ ++F E + G+ + TYN
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNT 473
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ F ++ D A ++MD I P+ ++ L+ G + E + + M++
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M + Y I +CK K EA +L + KG+KP+ VTY+ + G C G E +
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y M GL N GD + K+ ++ G+ P+ +K + +G+
Sbjct: 594 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPSL--LKDIKSGV 643
Query: 367 A 367
Sbjct: 644 C 644
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ V A++ L ++ + +F E + GI P++ TYN +I +FC S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEK-GIFPNVLTYNCMIDSFCHSG 59
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A +L M K I P+ +F AL+ F KE K + ++ + M R+ + YN
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I CK + +AK +LD M SKG P+ VT+S I G+CK + + + M
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ N+ Y T+++ C+ GD + A E I+ G P++ T ++ GL ++ +A
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
IK D+ ++ C+ + +A ++ EM K I PN ++ ++ F ++ D +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ M + + ++ I++ K RK +EA+ + EML + P ++TY+ I GF
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK ++AK+ M++ G SP+ + T++ CK + + E +G V N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T +L+ G + A++L+
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLL 208
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM E + +V +N ++ + + + + ++ + I PD+ T++ +I
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ-INPDIVTFSALI 87
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AF + S A I EM R SI P ++ +++ GF K+++ +D ++L M G
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V ++ I+ CK ++ + EM +G+ N+VTY+ I+GFC+ G+ + A+
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMC 332
M + G++P+ + M+ +C
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLC 231
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 1/197 (0%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + IK + A+V K+ + + + M G+ V YN I S C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
++A LL M+ K + P+ VT+S I F K+ EA++ Y+ M + P + Y +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
M+ CK + A +KG P+ T +L+ G A +V E+ + +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 386 FTKNVDTWNEIEAGLPQ 402
N T+ + G Q
Sbjct: 181 IVANTVTYTTLIHGFCQ 197
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +KEM + + +N+++ + KR+ ++ + G PD+ T++ +I
Sbjct: 99 AEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM-LDSMASKGCSPDVVTFSTLI 157
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ + I EM R+ I N ++ L+ GF
Sbjct: 158 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF---------------------- 195
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
C++ A+ LL+EM+S G+ P+ +T+ + G C +E +K
Sbjct: 196 -------------CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK---KELRKA 239
Query: 309 YRIMSN 314
+ I+ +
Sbjct: 240 FAILED 245
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + + + A R M V F+ L+ AK +F E + GI
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-GIVA 183
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TY +I FC+ D +A +L EM + P+ +F ++AG +++ +L
Sbjct: 184 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Query: 240 QMMER 244
+ +++
Sbjct: 244 EDLQK 248
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 1/258 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F +M E + +N+L+ E +F E K PD+ TYN
Sbjct: 272 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF-EQMKDADCDPDVITYNA 330
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ A+ L EM +KPN ++ + F KE ++ K M R
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I + CK AEA L++E+L G+K N VTY+ + G C++G +EA+
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 450
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +R M N+G++PN Y +V+ K + E A KE K P+ +++ GL
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 510
Query: 367 AGASKVSEAKELIGLVKE 384
S++ EAK LIG +KE
Sbjct: 511 CNESRLEEAKLLIGEIKE 528
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ M E A F +M + ++ + NALL L+ ++ R F + GIK +
Sbjct: 197 ELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLS-KVGRGDLSRKFFKDMGAAGIKRSV 255
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I C+ D A S+ +M P+ ++ +L+ G K ++ + +
Sbjct: 256 FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 315
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ V YN I+ CK + +A L EM + G+KPN VTYS FI FCK+G
Sbjct: 316 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA KF+ M L+PN Y +++ CK G+ AL +E + G N T +
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ GL ++ EA+E+ ++ N +T+ + G
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 475
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 2/256 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N+ E A++ +E+ + ++ +V + ALL L KE + VF G+ P+ +
Sbjct: 409 GNLAE-ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA-GVAPNQE 466
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY ++ F ++ + A IL EM K IKP+ +G ++ G E + E+ ++ +
Sbjct: 467 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 526
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G+ + +Y + + K + EA LL+EML G+ VTY I G CK G
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA + MS GL PN +VY +V +CK +E A E + KG +P+ +L
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646
Query: 363 VTGLAGASKVSEAKEL 378
+ G + EA L
Sbjct: 647 IDGNMKHGNLQEALNL 662
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A EM + L+ +V ++ + A +E + F++ + + P+ TY +I
Sbjct: 344 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV-ALTPNEFTYTSLI 402
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C++ + + A ++ E+ + IK N ++ AL+ G +E + ++ +V + M G+
Sbjct: 403 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 462
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y +H K ++ AK +L EM K +KP+ + Y ++G C + EEAK
Sbjct: 463 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 522
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ SG++ N+ +Y T++ K G AL +E + G + T +L+ GL
Sbjct: 523 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK 582
Query: 369 ASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
+ V EA G + E NV + + GL
Sbjct: 583 SGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 3/258 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E+A KEM E ++ + + +L L +E K + E K GI +
Sbjct: 477 KAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNA 535
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y ++ A+ +S ++ A ++L EM + ++ AL+ G K ++
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGR 595
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAE-AKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G++ V++Y + LCK C E AK L DEML KGM P+ + Y+ I G K G
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCK-NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 654
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
N +EA M G+ + Y +++ + G + A E I KG +P+
Sbjct: 655 NLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYM 714
Query: 361 SLVTGLAGASKVSEAKEL 378
L+ KV EA EL
Sbjct: 715 CLIKKYYALGKVDEALEL 732
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 1/219 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P ++ + A E A +M + + P S AL+ K + + K
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G+K V YN+ I LCK A++L +M G P+ VTY+ I G K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G +E + M ++ P+ Y ++ CK A F E A G PN T
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362
Query: 359 MKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEI 396
+ + + EA K + + + T N T+ +
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSL 401
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ Y ++ C+++ A + EM K + P+ ++ AL+ G K ++
Sbjct: 600 GLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 659
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M GM+ + Y I L + +A+ LLDEM+ KG+ P+ V Y I
Sbjct: 660 LNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKK 719
Query: 296 FCKDGNFEEAKKFYRIMSNSGL 317
+ G +EA + M+ G+
Sbjct: 720 YYALGKVDEALELQNEMAKRGM 741
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ K M ++H++ ++ L+ KD+ VF +F K G
Sbjct: 466 INLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD-G 524
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +I AFC + A ++ +M ++ +P +F ++ GF + +
Sbjct: 525 LKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRAL 584
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ MM R G V YN I L + R+ +A A+LDEM G+ PN TY+ + G+
Sbjct: 585 EIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGY 644
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ E+A +++ ++ N GL + Y ++ CK G ++AL KE AK N
Sbjct: 645 ASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNT 704
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
L+ G A V EA +L+ + KE ++ T+
Sbjct: 705 FVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTY 742
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 8/322 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINK-LSEANYFNGISQYLEELKTRPDLQNERFHAH 115
K LEI + ++ H + +S+ IN L ++ N S + E T+ L+ + +
Sbjct: 477 KALEISKMMKMSGIKH-NMKTYSMLINGFLKLKDWANAFSVF--EDFTKDGLKPDVVLYN 533
Query: 116 SII--LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+II G NM + A+ ++M + + R + F ++ A + + +F + +
Sbjct: 534 NIITAFCGMGNM-DRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIF-DMMR 591
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G P + TYN +I E + A +IL EM+ + PN ++ L+ G+ E
Sbjct: 592 RSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTE 651
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ ++ G++ V Y + S CK + A A+ EM +K + N+ Y+ I
Sbjct: 652 KAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILI 711
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+ + G+ EA + M GL P+ Y + + CK GD + A +E A G
Sbjct: 712 DGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIK 771
Query: 354 PNFTTMKSLVTGLAGASKVSEA 375
PN T +L+ G A AS +A
Sbjct: 772 PNLKTYTTLINGWARASMPEKA 793
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 1/300 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI + ++ + + EE K + N + I + Q + A +E
Sbjct: 355 VTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVRE 414
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + ++ ++ T+ + ++ VF K G P + +Y +I + +
Sbjct: 415 MEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL-KECGFFPSVISYGCLINLYTKVG 473
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A I M IK N ++ L+ GF K + + + V + + G+K V +YN
Sbjct: 474 KVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYN 533
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A ++ +M + +P + T+ I+GF + G A + + +M S
Sbjct: 534 NIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRS 593
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P Y ++ + + A+ E G PN T +L+ G A +A
Sbjct: 594 GCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKA 653
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A A+ F M +V +NAL+L L + + + E G+ P
Sbjct: 574 FARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEM-NVAGVGP 632
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TY +++ + D+ A+ + + ++ + ++ AL+ K + + V
Sbjct: 633 NEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 692
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + +YN+ I + EA L+ +M +G+ P+ TY+ FI CK
Sbjct: 693 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKA 752
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ ++A + + M SG+ PN Y T++ + E AL +E G+ P+
Sbjct: 753 GDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVY 812
Query: 360 KSLVTGLAGASKVSEAKELIGLV 382
LVT L + +++ GL+
Sbjct: 813 HCLVTSLLSRATFAQSYVYSGLL 835
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY ++K+ C+S SA ++ EM K+I N + L+ G+ + +
Sbjct: 664 GLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEA 723
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M + G+ + Y I++ CK +A ++ EM + G+KPN TY+ I G
Sbjct: 724 ADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLING 783
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD------YETALGFCKESI 348
+ + E+A + M +G P+ +VY +V + Y L C+E I
Sbjct: 784 WARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMI 842
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI +D Y+ ++ + + + + P+ S+G L+ + K K
Sbjct: 419 GIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKA 478
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ +MM+ G+K + Y++ I+ KL+ A A ++ ++ G+KP+ V Y++ I
Sbjct: 479 LEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITA 538
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC GN + A R M P + + +++ + G+ AL G +P
Sbjct: 539 FCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPT 598
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T +L+ GL ++++A ++
Sbjct: 599 VHTYNALILGLVEKRQMTKAVAIL 622
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 107/256 (41%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+ HA +TF+ M + S +++L+ A + +D +E + K GI+
Sbjct: 294 YGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKM-KEEGIEM 352
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TY+ ++ F + ++ +A E K NA +G ++ + + ++
Sbjct: 353 TIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALV 412
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G+ + + +Y+ + + + + D + G P+ ++Y I + K
Sbjct: 413 REMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKV 472
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +A + ++M SG+ N Y ++ K D+ A ++ G P+
Sbjct: 473 GKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLY 532
Query: 360 KSLVTGLAGASKVSEA 375
+++T G + A
Sbjct: 533 NNIITAFCGMGNMDRA 548
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP Y ++K + D A M + I+P++ + +L+ + E+
Sbjct: 281 KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M+ G++ + Y++ + K+ A +E K N+V Y IY C
Sbjct: 341 CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHC 400
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ N + A+ R M G+ +Y TM+ G+ E L G+ P+
Sbjct: 401 QICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVI 460
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVK 383
+ L+ KVS+A E+ ++K
Sbjct: 461 SYGCLINLYTKVGKVSKALEISKMMK 486
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 1/258 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F +M E + +N+L+ E +F E K PD+ TYN
Sbjct: 73 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF-EQMKDADCDPDVITYNA 131
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ A+ L EM +KPN ++ + F KE ++ K M R
Sbjct: 132 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 191
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I + CK AEA L++E+L G+K N VTY+ + G C++G +EA+
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +R M N+G++PN Y +V+ K + E A KE K P+ +++ GL
Sbjct: 252 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 311
Query: 367 AGASKVSEAKELIGLVKE 384
S++ EAK LIG +KE
Sbjct: 312 CNESRLEEAKLLIGEIKE 329
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A F +M + ++ + NALL L+ ++ R F + GIK + TY
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKV-GRGDLSRKFFKDMGAAGIKRSVFTY 59
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ D A S+ +M P+ ++ +L+ G K ++ + + M+
Sbjct: 60 NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
V YN I+ CK + +A L EM + G+KPN VTYS FI FCK+G +E
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A KF+ M L+PN Y +++ CK G+ AL +E + G N T +L+
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
GL ++ EA+E+ ++ N +T+ + G
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 275
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 27/280 (9%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N+ E A++ +E+ + ++ +V + ALL L KE + VF G+ P+ +
Sbjct: 210 GNLAE-ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA-GVAPNQE 267
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY ++ F ++ + A IL EM K IKP+ +G ++ G E + E+ ++ +
Sbjct: 268 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 327
Query: 243 ERYGMKSGVSMYNVR-----------------------IHSLCKLRKCAE-AKALLDEML 278
+ G+ + +Y + LCK C E AK L DEML
Sbjct: 328 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCK-NNCFEVAKKLFDEML 386
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
KGM P+ + Y+ I G K GN +EA M G+ + Y +++ + G +
Sbjct: 387 DKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQ 446
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A E I KG +P+ L+ KV EA EL
Sbjct: 447 KARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 24/329 (7%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN + ++L E+K N ++ I + + M + A++ F
Sbjct: 125 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 184
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M L + + +L+ A A + E ++ E + GIK ++ TY ++ CE
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA-GIKLNVVTYTALLDGLCE 243
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A + M + PN ++ ALV GF K ++ E +L+ M+ +K + +
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS----------------------- 290
Y + LC + EAK L+ E+ G+ N+V Y+
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 363
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ G CK+ FE AKK + M + G+ P+ Y ++ K G+ + AL I
Sbjct: 364 DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 423
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G + +L+ GL+ + +V +A+ L+
Sbjct: 424 GMELDLHAYTALIWGLSHSGQVQKARNLL 452
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ ++ +YN +I+ FC + + EM+R PN ++ ++ + K ++ ++
Sbjct: 198 GVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEA 257
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+L+ M G++ + YN+ I+ LC++ + E +L EM KG P+ VTY+ + G
Sbjct: 258 FKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNG 317
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK GNF +A + M +GL P+ Y +++ MCK G+ A+ F + +G PN
Sbjct: 318 YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPN 377
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SL+ G + + EA + +++ F + T+N + G
Sbjct: 378 GVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 12/294 (4%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRV 167
+++I++ G A E +R F+EM+ ++ +V +N ++ A I + +K ++ +
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E G++P+L TYN VI C +LAEMDRK P+ ++ LV G+
Sbjct: 265 GLE-----GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYC 319
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + + M R G+ V Y I+++CK A D+M +G++PN V
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I GF + G +EA + + M SG P Y ++ C G E A+G +
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM 439
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
KG P+ + +++ G ++ A ++ +V++ + + T++ + GL
Sbjct: 440 EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L +++ IN L S L E+ + + + + Y + A+ E
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + L V + +L+ + A + F + G++P+ TY +I F +
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM-HVRGLRPNGVTYTSLINGFSQKG 392
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
AY I EM R P ++ AL+ G + E+ +L+ ME G+ V Y+
Sbjct: 393 FMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYS 452
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I C+ ++ A + EM+ KG+ P+++TYS I G C+ EA ++ M N
Sbjct: 453 TIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK 512
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
L P+ Y +++ CK GD AL E I KG++P+ T L+ GL ++ EA
Sbjct: 513 SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
Query: 376 KELI 379
K L+
Sbjct: 573 KRLL 576
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 51/343 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN + +A N ++ +++ R N + I + Q + A R +
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM ++ +NALL ++ +E + + + G+ PD+ +Y+ +I FC
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGL-LRGMEGKGLSPDVVSYSTIIAGFCR 460
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A+ + AEM K + P+A ++ +L+ G ++ + + + Q M +
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS----------------------- 290
Y I+ CK EA L DEM+ KG P++VTY+
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580
Query: 291 ---------------------------HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
I GFC G EA + + M PN +V
Sbjct: 581 YDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV 640
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y +++ C+ G+ A KE + G++P+ T+ +LV L
Sbjct: 641 YNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS-AYSILAEMDRKSIKPNASSFGALVAGF 226
++ K G P + +YN ++ + A + EM + N S+ L+ GF
Sbjct: 154 IVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGF 213
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
E + + MER V YN I + CKL++ EA LL M +G++PN
Sbjct: 214 CAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNL 273
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+TY+ I G C+ G EE M G +P+ Y T+V CK G++ AL E
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ G P+ T SL+ + A ++ A E
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRK-CAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + + G GV YN + S+ + RK A+ + EM++ G+ N +Y+ I GF
Sbjct: 154 IVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGF 213
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C GN E +F+ M + PN Y T++ CK + A + +G PN
Sbjct: 214 CAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNL 273
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T ++ GL ++ E ++ + K F + T+N + G
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNG 317
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 110/281 (39%), Gaps = 21/281 (7%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S I L E N +E+ + L +E + I Y + A+
Sbjct: 482 DAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLH 541
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + +N L+ L +E KR+ ++ I P+ TY+ +I++
Sbjct: 542 DEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI-PNGITYDTLIES--- 597
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++++ KS+ AL+ GF + + ++V + M + K ++
Sbjct: 598 ----------CSDIEFKSVV-------ALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV 640
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV IH C+ +A L EM+ G P++VT + +G E+ R +
Sbjct: 641 YNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDIL 700
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
S ++ + +V K G+ + E G++P
Sbjct: 701 RSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 146/291 (50%), Gaps = 4/291 (1%)
Query: 115 HSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++++++G +N+ E A R F+EM E + V + +++ + + K +F E
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ P TY +I C++ +A ++ EM K I N F L+ G+ +
Sbjct: 358 DK-GLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 416
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ ++ +ME+ G++S V YN LCKL + EAK LL M+ +G+ PN+++++
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I +CK+GNF EAK+ +R M G PN Y ++ K G+ + A E +G
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 536
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+P+ T SL+ G KV A +L + ++ NV T+ + +GL +
Sbjct: 537 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 6/294 (2%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
E+F +Y M A+ F+ M++ + LLAL R F
Sbjct: 155 EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFF- 213
Query: 170 EFPKTYGIKPDLDTYNR--VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ + ++ Y+ V+ C+ D ++ E+ K +K N ++ A + G++
Sbjct: 214 --RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 271
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K V ++L +ME+ G+ V Y + IH + K EA+ L +EM KG++ +
Sbjct: 272 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y+ I C+ GN + A + M++ GL P++ Y +++ +CK G E A E
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
KG N +L+ G + V EA L + + K+ +V +N I +GL
Sbjct: 392 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 3/259 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H + +++G +A E A EM + + FN L+ + E R+ +
Sbjct: 366 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 425
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++ D+ YN + C+ + A +L M + + PN SF L+ + KE
Sbjct: 426 MEKK-GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 484
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + +V + ME G + YNV I K EA L DE+ ++G+ P+ T +
Sbjct: 485 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 544
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I+G C DG + A K + M GL PN Y M+ + K G E A E
Sbjct: 545 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 604
Query: 351 GWVPNFTTMKSLVTGLAGA 369
G P+ T SLV L A
Sbjct: 605 GLTPDDTVYSSLVGSLHSA 623
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 17/360 (4%)
Query: 20 RYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFS 79
R+L + + G + P+T +L+ N K C A E D L
Sbjct: 116 RHLFNCAAVDDGLRVPVT------VIASLVDDACNESK----CNRAKF-KEKFFDLLFRV 164
Query: 80 IAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEH 139
A NK+ F + E ++ + +ER ++ + + +R F+ M
Sbjct: 165 YADNKM-----FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNL 219
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+ +V + +L L D E+ R ++ G+K ++ TYN I+ + + D
Sbjct: 220 DVEVTVYSLTIVLDGLCKRGDV-EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 278
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
IL M+++ + N ++ L+ GF K E+ ++ + M G+++ V +Y I
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
C+ A L DEM KG+ P++ TY I+G CK G E A+ M G+
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N ++ T++ C+ G + AL KG + S+ +GL ++ EAK L+
Sbjct: 399 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 458
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 4/285 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
G + A + F EM + K + V + A++ AL A + + E ++ GI+P
Sbjct: 186 GCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRS-GIQP 244
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN ++ A C+S A+ + M ++P+ +FG L++G + +++ +V VL
Sbjct: 245 TVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVL 304
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M+ +G+ +YN I C+ C+EA L DEM+SKG+K VTY+ CK+
Sbjct: 305 QEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKE 364
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG-GDYETALGFCKESIAKGWVPNFTT 358
G E A+K M +G+ + S++ ++V + +G G + L +E +A+ PN
Sbjct: 365 GEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDAL 424
Query: 359 MKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGLPQ 402
M + + L + K EA E+ ++ + NV T N + GL Q
Sbjct: 425 MTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQ 469
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 127/253 (50%), Gaps = 3/253 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++I++ G +A+ + A++ +M + + + FN L +E+ + +
Sbjct: 495 YNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM- 553
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K+ G+KPD+ TY +I +C++ D A L E+ + ++PNA + AL+ G+ +
Sbjct: 554 KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
D +L M+ G++ YN ++ +C E KA+ + + K ++ + Y+
Sbjct: 614 SDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTII 673
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFCK G +EA +++ M + G+ PN Y T+++ K G+ E A E ++ G
Sbjct: 674 IQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGI 733
Query: 353 VPNFTTMKSLVTG 365
VP+ + +L++G
Sbjct: 734 VPDSVSYNTLISG 746
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + ++ L +V NAL+ L + KE +V + G++ D TYN
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS-GVELDRITYNI 497
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C++S A + +M ++ KP+ +F + + K E++ +L M+ G
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + Y I CK + +A L E++ G++PN+V Y+ I G+ ++GN +A
Sbjct: 558 LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M +G+ P Y +++Y+MC G E + I K ++ G
Sbjct: 618 GILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGF 677
Query: 367 AGASKVSEA 375
K+ EA
Sbjct: 678 CKIGKIDEA 686
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 137/343 (39%), Gaps = 35/343 (10%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F I I+ L+ F + L+E++ NE + I + + A++ F E
Sbjct: 282 VTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDE 341
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE------------FPKTYG------- 176
M ++ +V +N + AL + + +++ E F
Sbjct: 342 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTG 401
Query: 177 ----------------IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+KP+ I+ C+S A I ++ K + N ++
Sbjct: 402 RLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSN 461
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
AL+ G + ++ KVL+ M G++ YN+ I CK K EA L D+M+ +
Sbjct: 462 ALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR 521
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G KP+ T++ F++ +C G EE M + GL P+ Y T++ CK D A
Sbjct: 522 GFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKA 581
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+ E + G PN +L+ G +S+A ++ +K
Sbjct: 582 NEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMK 624
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+R +EM L+ + A + L + ++E ++ + G+ ++ T N +I
Sbjct: 407 LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK-GLGVNVATSNALIH 465
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ ++ A +L M ++ + ++ ++ G K K ++ ++ M + G K
Sbjct: 466 GLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKP 525
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ +N+ +H+ C L K E LLD+M S+G+KP+ VTY I G+CK + +A ++
Sbjct: 526 DLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYL 585
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ +GL PN+ +Y ++ + G+ A+G G P T SL+ + A
Sbjct: 586 TELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHA 645
Query: 370 SKVSEAKEL 378
V E K +
Sbjct: 646 GLVEEVKAV 654
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 114/294 (38%), Gaps = 47/294 (15%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHA 129
LDR+ ++I I +A+ + Q +++ R PDL H+ Y E
Sbjct: 490 LDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHT---YCNLGKVEEI 546
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ +M L+ + + ++ AKD + E K G++P+ YN +I
Sbjct: 547 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKN-GLRPNAVIYNALIG 605
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ + + S A IL M I+P ++ +L+ E+V V ++
Sbjct: 606 GYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIEL 665
Query: 250 GVSMYNVRIHSLCKLRKC-----------------------------------AEAKALL 274
GV Y + I CK+ K EA L
Sbjct: 666 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEE-----AKKFYRIMSNSGLSPNSSV 323
DEM+S G+ P+SV+Y+ I GFC+ + ++ A+ +++ G S N+ V
Sbjct: 726 DEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 7/226 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + I+ +A + ++YL EL N + I YG+ A+
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + ++ + +N+L+ + A +EVK VF + I+ + Y +I+ FC+
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC-IVKDIELGVIGYTIIIQGFCK 679
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A EM + I PN ++ L+ + K E+ +K+ M G+
Sbjct: 680 IGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVS 739
Query: 254 YNVRIHSLCK---LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
YN I C+ L K E+ A EM S+ +K + +Y+ F+ G
Sbjct: 740 YNTLISGFCEVDSLDKMVESPA---EMSSQVLKQDGCSYNAFVDGI 782
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 3/322 (0%)
Query: 82 INKLSEANYFNGISQYLEEL-KTRPDLQ-NERFHAHSIILYGQANMTEHAVRTFKEM-DE 138
I+KLS A F+G+ L +L + ++ + I YG A A++TF + +E
Sbjct: 56 IDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEE 115
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
++ SV N LL K Y V YG+ P++ ++N +IKA C+ +D
Sbjct: 116 FSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVE 175
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+A + EM + PN ++ ++ GF + KV + G + Y V +
Sbjct: 176 NALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLM 235
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
CK + ++A ++D M G++PN VTY I +CK+ EA+ M +
Sbjct: 236 VGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFL 295
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+S++ ++ +C+ G E A K + K +P+ M +L+ L KV EA++L
Sbjct: 296 PSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKL 355
Query: 379 IGLVKEKFTKNVDTWNEIEAGL 400
++ ++ T+N + AG+
Sbjct: 356 FDEFEQGTIPSLMTYNTLIAGM 377
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 127/309 (41%), Gaps = 39/309 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N E+A++ F EM + ++ + +L D ++VF E G PD
Sbjct: 170 KKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDK-GWLPDA 228
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-- 239
TY ++ +C+ S A ++ M+ ++PN ++G ++ + KE+K + ++
Sbjct: 229 TTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDD 288
Query: 240 ----------------------------------QMMERYGMKSGVSMYNVRIHSLCKLR 265
+M+E+ + M + IH LCK
Sbjct: 289 MLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTL-IHWLCKEG 347
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K EA+ L DE +G P+ +TY+ I G C+ G EA + + M PN+ Y
Sbjct: 348 KVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYN 406
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
++ K G + + +E + G +PN +T L+ GL + + +++ +
Sbjct: 407 MLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMAS 466
Query: 386 FTKNVDTWN 394
+ D+W+
Sbjct: 467 REVDADSWD 475
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A+ +M+ K+ V FN ++ +L + + +F E +T GI+P++ TY+
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 261
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C S A +L++M K I PN +F AL+ F KE K+ + K+ M +
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN ++ C + +AK + + M+SK P+ VTY+ I GFCK E+
Sbjct: 322 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R MS+ GL ++ Y T++ + GD + A K+ ++ G P+ T L+ G
Sbjct: 382 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441
Query: 366 LAGASKVSEAKEL 378
L K+ +A E+
Sbjct: 442 LCNNGKLEKALEV 454
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ I+ L + + + +E++T RP++ + YG+ + A
Sbjct: 221 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DAS 277
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M E K+ ++ FNAL+ A + E ++++ + K I PD+ TYN ++
Sbjct: 278 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNG 336
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K P+ ++ L+ GF K ++ ED ++ + M G+
Sbjct: 337 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 396
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L C A+ + +M+S G+ P+ +TYS + G C +G E+A + +
Sbjct: 397 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 456
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + + +Y TM+ MCK G + FC S+ KG PN T ++++GL
Sbjct: 457 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSK 515
Query: 370 SKVSEAKELIGLVKE 384
+ EA L+ +KE
Sbjct: 516 RLLQEAYALLKKMKE 530
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ FN LL A+ K + V + E + I L TYN
Sbjct: 29 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG-EKMQRLEIVHGLYTYNI 87
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ G+ ++ D ++ M G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + IH L K +EA AL+D M+ +G +PN VTY + G CK G+ + A
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + + ++ T++ +CK + AL KE KG PN T SL++ L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A +L+ ++++K N+ T+N +
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 127 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 185
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D+ A ++L +M+ I+ + F ++ K +D +
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G++ V Y+ I LC + ++A LL +M+ K + PN VT++ I F K+
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA+K Y M + P+ Y ++V C + A + ++K P+ T
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ G + +V + EL GLV + T
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I + +S A +++ M ++ +PN ++G +V G K +
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V ++N I SLCK R +A L EM +KG++PN VTYS I
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G + A + I + P+
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SLV G ++ +AK++ +V + +V T+N + G
Sbjct: 327 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 371
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L ++ SQ L ++ K P+L F+A + E A +
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNALIDAFVKEGKFVE-AEKL 314
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ +M + + + +N+L+ + + K++F EF + PD+ TYN +IK FC
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGFC 373
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM + + + ++ L+ G + + ++ KV + M G+ +
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + LC K +A + D M +K + Y+ I G CK G ++ + +
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S G+ PN Y TM+ +C + A K+ G +PN T +L+
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553
Query: 373 SEAKELI 379
+ + ELI
Sbjct: 554 AASAELI 560
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 112 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 171
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ + V ++ I
Sbjct: 172 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 231
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I K PN
Sbjct: 232 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 291
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
T +L+ K EA++L ++K ++ T+N + G
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 336
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ A + M + P+ F L++ K +K++ V + + M+
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R + G+ YN+ I+ C+ + + A ALL +M+ G +P+ VT S + G+C
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G PN T +V
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL A L+ + K +V +N I
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E++ R F +M E L V +N+L+ +EV +F E K G PD+ TYN
Sbjct: 247 ENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM-KDVGCVPDIITYNG 305
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ A+ +EM +KPN ++ L+ F KE + K+L M R G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I + CK EA LL++ML G+K N VTY+ + G CK G EA+
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +R M G+SPN VY +V+ K E A+ K+ P+ S++ G
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485
Query: 367 AGASKVSEAKELIGLVKEK 385
K+ E K ++ +K +
Sbjct: 486 CSQRKLEETKLILEEMKSR 504
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 2/282 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
++ + + E A F M + + N LL L+ + + + V++ F + GI
Sbjct: 169 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIA 227
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TYN +I C+ D ++ + +M + P+ ++ +L+ G+ K E+V +
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M+ G + YN I+ CK K A EM + G+KPN VTYS I FCK
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G + A K M +GL PN Y +++ CK G+ A + + G N T
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+L+ GL A ++ EA+E+ ++K+ + N + + G
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 1/283 (0%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+Y E+K N ++ I + + M + A++ +M L + + +L+ A
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A + E ++ + + G+K ++ TY ++ C++ A + M + I PN
Sbjct: 381 CKAGNLTEAWKLLNDMLQA-GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 439
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ALV G+ K E+ ED K+L+ M +K + +Y I C RK E K +L+
Sbjct: 440 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 499
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM S+G+ N V + I + K G +A F++ M + G+ Y ++ +C+ G
Sbjct: 500 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAG 559
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E A+ + ++ G PN SL+ GL + + AK+L
Sbjct: 560 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKL 602
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S I+ + G + L +++ L NE + I +A A + +
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ ++ + ALL L A E + VF K GI P+ Y ++ + ++
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD-GISPNQQVYTALVHGYIKAE 454
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A IL +M +IKP+ +G+++ G + K E+ +L+ M+ G+ + +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + K K ++A EM G++ VTY I G C+ G E A ++ M +
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL PN +VY +++ +C E+A E +G P+ T +L+ G + EA
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 634
Query: 376 KELIGLVKE 384
LI + E
Sbjct: 635 LVLISRMTE 643
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 12/328 (3%)
Query: 62 CRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ---------NE 110
C+A LT L D L + +N ++ +G+ + ++ + N+
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ + + Y +A E A++ K+M E ++ + + +++ + +E K + E
Sbjct: 441 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 500
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K+ GI + +I A+ ++ SS A + EM ++ ++ L+ G +
Sbjct: 501 M-KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAG 559
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E M G++ V++Y I LC AK L DEM +GM P+ ++
Sbjct: 560 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFT 619
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G K GN +EA M+ + + VY ++V + G+ A F E I K
Sbjct: 620 ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 679
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G +P L+ ++ EA EL
Sbjct: 680 GILPEEVLCICLLREYYKRGQLDEAIEL 707
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 97/254 (38%), Gaps = 36/254 (14%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
++ + F E A + M P A S L+ K + V K M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ V YNV I LCK ++ L +M G+ P+ VTY+ I G+ K G+
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 303 EE-----------------------------------AKKFYRIMSNSGLSPNSSVYFTM 327
EE A +++ M N+GL PN Y T+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKF 386
+ CK G + A+ + G +PN T SL+ A ++EA +L+ +++
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401
Query: 387 TKNVDTWNEIEAGL 400
N+ T+ + GL
Sbjct: 402 KLNIVTYTALLDGL 415
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
SG +++V +L EA M + P + + + ++ K GN + +KF
Sbjct: 158 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 217
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M +G++P+ Y M+ ++CK GD E + + G P+ T SL+ G
Sbjct: 218 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277
Query: 369 ASKVSEAKEL------IGLVKEKFTKN 389
+ E L +G V + T N
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYN 304
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 43/366 (11%)
Query: 74 DRLAFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--- 124
D + FS +N ++SEA + + E+K RPDL + + L G+ +
Sbjct: 168 DTITFSTLVNGFCLEGRVSEAV---ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 224
Query: 125 -----MTEH------------------------AVRTFKEMDEHKLRHSVGAFNALLLAL 155
M E+ A+ F++M+E ++ SV ++ ++ +L
Sbjct: 225 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 284
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + +F E + GIK D+ TY+ +I C +L EM ++I P+
Sbjct: 285 CKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+F AL+ F KE K + ++ M G+ YN I CK EA + D
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M+SKG +P+ VTYS I +CK ++ + +R +S+ GL PN+ Y T+V C+ G
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
A +E +++G P+ T L+ GL ++++A E+ + K + T + +N
Sbjct: 464 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 523
Query: 395 EIEAGL 400
I G+
Sbjct: 524 IIIHGM 529
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + FS I+ + + E+ TR + + I + + N A + F
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + ++ L+ + AK + R+F E + G+ P+ TYN ++ FC+
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQ 461
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S ++A + EM + + P+ ++G L+ G + ++ + M++ M G+ +
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ IH +C K +A +L + KG+KP+ VTY+ I G CK G+ EA +R M
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
G +P+ Y ++ G +++ +E G+ + +T+K ++ L+
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 13/324 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTF 133
+ +SI I+ L + F+ E++ + +S ++ G N + +
Sbjct: 275 VQYSIVIDSLCKDGSFDDALSLFNEMEMKG--IKADVVTYSSLIGGLCNDGKWDDGAKML 332
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + V F+AL+ E K ++ E T GI PD TYN +I FC+
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCK 391
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K +P+ ++ L+ + K ++ +D ++ + + G+
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + C+ K AK L EM+S+G+ P+ VTY + G C +G +A + + M
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S ++ +Y +++ MC + A FC S KG P+ T ++ GL +
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS-DKGVKPDVVTYNVMIGGLCKKGSL 570
Query: 373 SEAKELI------GLVKEKFTKNV 390
SEA L G + FT N+
Sbjct: 571 SEADMLFRKMKEDGCTPDDFTYNI 594
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 4/262 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+ M + + + FN L A+ K Y V F + + GI+ D+ T +I
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMI 141
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C A+S+L + +P+ +F LV GF E + + ++ M +
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + I+ LC + +EA L+D M+ G +P+ VTY + CK GN A
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R M + + Y ++ +CK G ++ AL E KG + T SL+ GL
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 369 ASKVSEAKELIGLVKEKFTKNV 390
K + +++ +E +N+
Sbjct: 322 DGKWDDGAKML---REMIGRNI 340
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T++ ++ FC S A +++ M +P+ + L+ G + + +
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M YG + Y ++ LCK A A L +M + +K + V YS I
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CKDG+F++A + M G+ + Y +++ +C G ++ +E I + +P+
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L+ K+ EAKEL ++ + T+N + G
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 388
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 80/191 (41%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A + M + P F L + + ++Y+ V + ME G++ + +
Sbjct: 81 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 140
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I+ C+ +K A ++L G +P+++T+S + GFC +G EA M
Sbjct: 141 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 200
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ T++ +C G AL + G+ P+ T ++ L + + A +
Sbjct: 201 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260
Query: 378 LIGLVKEKFTK 388
L ++E+ K
Sbjct: 261 LFRKMEERNIK 271
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 142/320 (44%), Gaps = 3/320 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
FS+ I+KL AN F L+ +K E YG+ + ++R F +M
Sbjct: 81 TFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKM 140
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + + ++ ++L L K R + + K GI P + + N +IKAFC++S
Sbjct: 141 QDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRK-MGIPPTVTSLNVLIKAFCKNSG 199
Query: 197 S-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A + M +P++ ++G L+ G + + ++LQ ME G V Y
Sbjct: 200 TMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYT 259
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LC+L EA LL++M K ++PN TYS + GFCK G+ A+ +M
Sbjct: 260 SIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQK 319
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
L PN Y T++ +C G AL +G+ P+ +V L S+ EA
Sbjct: 320 RLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEA 379
Query: 376 KELIG-LVKEKFTKNVDTWN 394
+ +V N TW+
Sbjct: 380 ANFLDEMVLCGIKPNRITWS 399
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 8/256 (3%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM+ SV + +++ L + E R+ +E K I+P++ TY+ ++ FC
Sbjct: 243 LQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRL-LEDMKDKNIEPNVFTYSSLMDGFC 301
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ SS A IL M +K ++PN S+ L+ G E K + ++ M+ G K
Sbjct: 302 KTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAG 361
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-------HFIYGFCKDGNFEEA 305
+Y ++ LC + + EA LDEM+ G+KPN +T+S I+G C N A
Sbjct: 362 LYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRA 421
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ Y + G+S + +++ C D E + G +P ++V
Sbjct: 422 FQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNC 481
Query: 366 LAGASKVSEAKELIGL 381
K +A +L+ L
Sbjct: 482 FCDERKACDAMKLLQL 497
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 113/298 (37%), Gaps = 76/298 (25%)
Query: 162 KEVKRVFIEFPKTY-----GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI---- 212
+++K+ I F G K DL+T++ +I ++ A ++L M + I
Sbjct: 55 RDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTE 114
Query: 213 -------------------------------KPNASSFGALVAGFYKEEK-------YED 234
KP S+ +++A +E + Y D
Sbjct: 115 DILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRD 174
Query: 235 VNK-----------------------------VLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+ K + + M +G + Y I+ LC+ R
Sbjct: 175 MRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFR 234
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
EAK LL EM +KG P+ VTY+ I+G C+ N +EA + M + + PN Y
Sbjct: 235 SIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYS 294
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+++ CK G A + I K PN + +L+ GL K++EA E+ +K
Sbjct: 295 SLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMK 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 110/268 (41%), Gaps = 12/268 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D + IN L + L+E++T+ + ++ I++G Q N + A+R
Sbjct: 219 DSYTYGTLINGLCRFRSIVEAKELLQEMETKG--CSPSVVTYTSIIHGLCQLNNVDEAMR 276
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
++M + + +V +++L+ + R +E ++P++ +Y+ ++
Sbjct: 277 LLEDMKDKNIEPNVFTYSSLMDGFC-KTGHSSRARDILELMIQKRLRPNMISYSTLLNGL 335
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG- 250
C + A I M + KP+A +G +V ++++ L M G+K
Sbjct: 336 CNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNR 395
Query: 251 ------VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
V +N IH LC + A L +L++G+ T++ + FC + +
Sbjct: 396 ITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPK 455
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ M +G P ++ TMV C
Sbjct: 456 TSRILDEMVINGCIPQGEMWSTMVNCFC 483
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 15/194 (7%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNAL 151
I + + + + RP++ ++S +L G N A+ F M + G + +
Sbjct: 312 ILELMIQKRLRPNMI-----SYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKI 366
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPD-------LDTYNRVIKAFCESSDSSSAYSIL 204
+ L ++E F++ GIKP+ + T+NRVI C ++S+ A+ +
Sbjct: 367 VNCLCDVSRFQEAAN-FLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLY 425
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+ + I +F +L+ F ++ +++L M G M++ ++ C
Sbjct: 426 LSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDE 485
Query: 265 RKCAEAKALLDEML 278
RK +A LL L
Sbjct: 486 RKACDAMKLLQLQL 499
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 146/291 (50%), Gaps = 4/291 (1%)
Query: 115 HSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++++++G +N+ E A R F+EM E + V + +++ + + K +F E
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ P TY +I C++ +A ++ EM K I N F L+ G+ +
Sbjct: 362 DK-GLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ ++ +ME+ G++S V YN LCKL + EAK LL M+ +G+ PN+++++
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I +CK+GNF EAK+ +R M G PN Y ++ K G+ + A E +G
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+P+ T SL+ G KV A +L + ++ NV T+ + +GL +
Sbjct: 541 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 591
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 6/294 (2%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
E+F +Y M A+ F+ M++ + LLAL R F
Sbjct: 159 EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFF- 217
Query: 170 EFPKTYGIKPDLDTYNR--VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ + ++ Y+ V+ C+ D ++ E+ K +K N ++ A + G++
Sbjct: 218 --RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 275
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K V ++L +ME+ G+ V Y + IH + K EA+ L +EM KG++ +
Sbjct: 276 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y+ I C+ GN + A + M++ GL P++ Y +++ +CK G E A E
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
KG N +L+ G + V EA L + + K+ +V +N I +GL
Sbjct: 396 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 3/261 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H + +++G +A E A EM + + FN L+ + E R+ +
Sbjct: 370 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 429
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++ D+ YN + C+ + A +L M + + PN SF L+ + KE
Sbjct: 430 MEKK-GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 488
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + +V + ME G + YNV I K EA L DE+ ++G+ P+ T +
Sbjct: 489 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 548
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I+G C DG + A K + M GL PN Y M+ + K G E A E
Sbjct: 549 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 608
Query: 351 GWVPNFTTMKSLVTGLAGASK 371
G P+ T SLV L A +
Sbjct: 609 GLTPDDTVYSSLVGSLHSADE 629
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 17/360 (4%)
Query: 20 RYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFS 79
R+L + + G + P+T +L+ N K C A E D L
Sbjct: 120 RHLFNCAAVDDGLRVPVT------VIASLVDDACNESK----CNRAKF-KEKFFDLLFRV 168
Query: 80 IAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEH 139
A NK+ F + E ++ + +ER ++ + + +R F+ M
Sbjct: 169 YADNKM-----FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNL 223
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+ +V + +L L D E+ R ++ G+K ++ TYN I+ + + D
Sbjct: 224 DVEVTVYSLTIVLDGLCKRGDV-EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 282
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
IL M+++ + N ++ L+ GF K E+ ++ + M G+++ V +Y I
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
C+ A L DEM KG+ P++ TY I+G CK G E A+ M G+
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N ++ T++ C+ G + AL KG + S+ +GL ++ EAK L+
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 462
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
NE + + + ++ T A+ ++M+E ++ ++ ++ L +F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E + G K D+ TYN +I FC + +L +M ++ I PN +F L+ F K
Sbjct: 287 NEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K + +++L+ M + G+ YN I CK + EA ++D M+SKG P+ +T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK ++ + +R MS G+ N+ Y T+V C+ G E A +E +
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
++ P+ + K L+ GL ++ +A E+ G + K K ++ + I G+
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
V I+ G +P+ TY V+ C+S ++ A +L +M+ ++IK +A + ++ G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K+ ++ + ME G K+ + YN I C + + LL +M+ + + PN
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VT+S I F K+G EA + + M G++PN+ Y +++ CK E A+
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
I+KG P+ T L+ G A+++ + EL + + N T+N + G Q
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N L L +++ + V R+ G KP L T N ++ C + S A ++ M
Sbjct: 165 LNGLCLECRVSEALELVDRMV-----EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+PN ++G ++ K + ++L+ ME +K Y++ I LCK
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A L +EM KG K + +TY+ I GFC G +++ K R M +SPN + +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ K G A KE + +G PN T SL+ G +++ EA +++ L+ K
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD + +SI I+ L + + E++ + + + I + A + +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M + K+ +V F+ L+ + +E ++ E + GI P+ TYN +I FC
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFC 379
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A ++ M K P+ +F L+ G+ K + +D ++ + M G+ +
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN + C+ K AK L EM+S+ ++P+ V+Y + G C +G E+A + + +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FC 344
S + + +Y +++ MC + A FC
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 1/292 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ FS+ I+ + Q L+E+ R N + I + + N E A++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + FN L+ A + +F E G+ + TYN +++ FC+S
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSG 452
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM + ++P+ S+ L+ G + E ++ +E+ M+ + +Y
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ IH +C K +A L + KG+K ++ Y+ I C+ + +A +R M+
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
G +P+ Y ++ D TA +E + G+ + +T+K ++ L+
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +AN + + F+EM + + +N L+ + + K++F E + ++P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV-SRRVRP 471
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +Y ++ C++ + A I ++++ ++ + + ++ G K +D +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K YN+ I LC+ ++A L +M +G P+ +TY+ I D
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ A + M +SG + S MV M G+ +
Sbjct: 592 DDATTAAELIEEMKSSGFPADVST-VKMVINMLSSGELD 629
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%)
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A + +M + P F L + K ++YE V + + ME G+ + ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I+ C+ RK + A + + +++ G +P++V ++ + G C + EA + M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
P T+V +C G A+ + G+ PN T ++ + + + + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 377 ELIGLVKEKFTK 388
EL+ ++E+ K
Sbjct: 249 ELLRKMEERNIK 260
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++S +N + + + +E +K + N + I L + A F
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + L+ D + + F E + I PD+ TY +I FC+
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQ 841
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D A + EM K ++P++ +F L+ G+ K +D +V M + G V
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I LCK A LL EM G++PN TY+ + G CK GN EEA K
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+GL+ ++ Y T++ CK G+ + A KE + KG P T L+ G +
Sbjct: 962 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 374 EAKELIG-LVKEKFTKNVDTWNEI 396
+ ++L+ ++ + N T+N +
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSL 1045
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKR--VFIEFPKTYGIKPDL 181
+ A R F++M + L SV + N L L+ KD YK VF EFP+ G+ ++
Sbjct: 633 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLS--KDCYKTATAIIVFREFPEV-GVCWNV 689
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+YN VI C+ A+ +L M+ K P+ S+ +V G+ + + + V K++++
Sbjct: 690 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+R G+K +Y I LC++ K AEA+ EM+ +G+ P++V Y+ I GFCK G+
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A KF+ M + ++P+ Y ++ C+ GD A E KG P+ T
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ G A + +A + +++ + NV T+ + GL
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ F+E E + +V ++N ++ + KE + + + G PD+ +Y+
Sbjct: 670 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYS 728
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ +C + + ++ M RK +KPN+ +G+++ + K + + M R
Sbjct: 729 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 788
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ +Y I CK A EM S+ + P+ +TY+ I GFC+ G+ EA
Sbjct: 789 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M GL P+S + ++ CK G + A I G PN T +L+ G
Sbjct: 849 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L + A EL+ + K N+ T+N I GL
Sbjct: 909 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRT 132
D + ++ I+ + S++ E+ +R D+ + +II + Q A +
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM L F L+ A K+ RV + G P++ TY +I C
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLC 910
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ D SA +L EM + ++PN ++ ++V G K E+ K++ E G+ +
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 970
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + + CK + +A+ +L EML KG++P VT++ + GFC G E+ +K M
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G++PN++ + ++V C + + A K+ ++G P+ T ++LV G A +
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 373 SEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
EA L +K K F+ +V T++ + G
Sbjct: 1091 KEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A R M + +V + L+ L D + E K G++P
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQP 932
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C+S + A ++ E + + + ++ L+ + K + + ++L
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G++ + +NV ++ C + + LL+ ML+KG+ PN+ T++ + +C
Sbjct: 993 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N + A Y+ M + G+ P+ Y +V CK + + A +E KG+ + +T
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ G K EA+E+
Sbjct: 1113 SVLIKGFLKRKKFLEAREV 1131
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVRTF 133
+ ++ I+ L + + ++ L E+ + LQ F +SI+ L N+ E AV+
Sbjct: 900 VTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNI-EEAVKLV 957
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E + L + L+ A + + + + + E G++P + T+N ++ FC
Sbjct: 958 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 1016
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+L M K I PNA++F +LV + + + + M G+
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 1076
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + CK R EA L EM KG + TYS I GF K F EA++ + M
Sbjct: 1077 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136
Query: 314 NSGLSPNSSVY 324
GL+ + ++
Sbjct: 1137 REGLAADKEIF 1147
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A KEM L+ ++ FN L+ + ++ +++ + + GI P
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL-LNWMLAKGIAP 1037
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T+N ++K +C ++ +A +I +M + + P+ ++ LV G K ++ +
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
Q M+ G VS Y+V I K +K EA+ + D+M +G+ + + F
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 1150
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 119/225 (52%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P++ YN +I + C+ + A+ + +EM K I P+ ++ AL++GF K +D
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M +K V +N+ +++ CK K E K + D M+ +G+KPN VTY+ + G+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C +AK + M+ G++P+ Y M+ CK ++ A+ KE K +P+
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T SL+ GL+ + ++S A +L+ + ++ N+ T+N I L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ + +D + ++ +V +N ++ ++ K E +F E + GI PD+ TY+
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM-VSKGISPDVVTYS 264
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A + +M ++IKP+ +F LV F K+ K ++ V MM +
Sbjct: 265 ALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ 324
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K YN + C +++ +AK++ + M G+ P+ +YS I GFCK F+EA
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ M + P+ Y +++ + K G AL + +G PN T S++
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
L +V +A L+ K+K F ++ T++ + GL Q
Sbjct: 445 LCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 138/307 (44%), Gaps = 1/307 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D++++ I+ L + L+ + N + I + + A
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F EM + V ++AL+ I K+ +F + IKPD+ T+N ++ AF
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE-NIKPDVYTFNILVNAF 305
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ ++ M ++ IKPN ++ +L+ G+ ++ + M + G+ +
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y++ I+ CK++K EA L EM K + P+ VTYS I G K G A +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G+ PN Y +++ +CK + A+ + KG+ P+ +T L+ GL + K
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 372 VSEAKEL 378
+ +A+++
Sbjct: 486 LEDARKV 492
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F M + ++ + +N+L+ + K+ + K +F + G+ PD+ +Y+ +I F
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGF 375
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A ++ EM RK+I P+ ++ +L+ G K + +++ M G+ +
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 435
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + +LCK + +A ALL + KG +P+ TYS I G C+ G E+A+K +
Sbjct: 436 CTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFED 495
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ G + + Y M+ C G + AL + G +P+ T + ++ L +
Sbjct: 496 LLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 372 VSEAKELI 379
A++L+
Sbjct: 556 NDMAEKLL 563
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F +M ++ V FN L+ A KE K VF K GIKP+ TYN ++
Sbjct: 279 AIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ-GIKPNFVTYNSLM 337
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + + A SI M + + P+ S+ ++ GF K +K+++ + + M R +
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I L K + + A L+D+M +G+ PN TY+ + CK ++A
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ G P+ S Y ++ +C+ G E A ++ + KG+ + ++ G
Sbjct: 458 LTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCV 517
Query: 369 ASKVSEAKELI 379
+EA L+
Sbjct: 518 EGLFNEALALL 528
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDL 181
N + AV F + FN +L +L +K Y V + +EF GIKP+L
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEF---RGIKPNL 120
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF---------------------- 219
N +I FC+ A+S+ A++ + P+ +F
Sbjct: 121 VNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDK 180
Query: 220 -------------GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
G L+ G K + +LQ ++ ++ V MYN I S+CK++
Sbjct: 181 VVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L EM+SKG+ P+ VTYS I GFC G ++A + M + P+ +
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+V CK G + + +G PNF T SL+ G +V++AK +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
K + +Y+ F ++D A S+ + R++ P A F ++ K + Y V
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ Q ME G+K + N+ I+ C+L A ++ ++L G P+++T++ G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G ++A F+ + G + Y T+++ +CK G+ AL + PN
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+++ + V+EA +L +V + + +V T++ + +G
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGF 270
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++S +N + + + +E +K + N + I L + A F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + L+ D + + F E + I PD+ TY +I FC+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQ 398
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D A + EM K ++P++ +F L+ G+ K +D +V M + G V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I LCK A LL EM G++PN TY+ + G CK GN EEA K
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+GL+ ++ Y T++ CK G+ + A KE + KG P T L+ G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 374 EAKELIG-LVKEKFTKNVDTWNEI 396
+ ++L+ ++ + N T+N +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSL 602
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKR--VFIEFPKTYGIKPDL 181
+ A R F++M + L SV + N L L+ KD YK VF EFP+ G+ ++
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLS--KDCYKTATAIIVFREFPEV-GVCWNV 246
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+YN VI C+ A+ +L M+ K P+ S+ +V G+ + + + V K++++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+R G+K +Y I LC++ K AEA+ EM+ +G+ P++V Y+ I GFCK G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A KF+ M + ++P+ Y ++ C+ GD A E KG P+ T
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ G A + +A + +++ + NV T+ + GL
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ F+E E + +V ++N ++ + KE + + + G PD+ +Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYS 285
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ +C + + ++ M RK +KPN+ +G+++ + K + + M R
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ +Y I CK A EM S+ + P+ +TY+ I GFC+ G+ EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M GL P+S + ++ CK G + A I G PN T +L+ G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L + A EL+ + K N+ T+N I GL
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 2/328 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ + S++ E+ +R + + I + Q A + F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM L F L+ A K+ RV + G P++ TY +I C+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCK 468
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D SA +L EM + ++PN ++ ++V G K E+ K++ E G+ +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + + CK + +A+ +L EML KG++P VT++ + GFC G E+ +K M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G++PN++ + ++V C + + A K+ ++G P+ T ++LV G A +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 374 EAKELIGLVKEK-FTKNVDTWNEIEAGL 400
EA L +K K F+ +V T++ + G
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A R M + +V + L+ L D + E K G++P
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQP 489
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C+S + A ++ E + + + ++ L+ + K + + ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G++ + +NV ++ C + + LL+ ML+KG+ PN+ T++ + +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N + A Y+ M + G+ P+ Y +V CK + + A +E KG+ + +T
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ G K EA+E+
Sbjct: 670 SVLIKGFLKRKKFLEAREV 688
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVRTF 133
+ ++ I+ L + + ++ L E+ + LQ F +SI+ L N+ E AV+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNI-EEAVKLV 514
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E + L + L+ A + + + + + E G++P + T+N ++ FC
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+L M K I PNA++F +LV + + + + M G+
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + CK R EA L EM KG + TYS I GF K F EA++ + M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 314 NSGLSPNSSVY 324
GL+ + ++
Sbjct: 694 REGLAADKEIF 704
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A KEM L+ ++ FN L+ + ++ +++ + + GI P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL-LNWMLAKGIAP 594
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T+N ++K +C ++ +A +I +M + + P+ ++ LV G K ++ +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
Q M+ G VS Y+V I K +K EA+ + D+M +G+ + + F
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 132/277 (47%), Gaps = 6/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTY 184
E V FKEM+ ++++V + L+ V F F KT G KPD+ +
Sbjct: 57 ETVVSLFKEMEFRGIKYNVCTLSILINCFCF---LHHVDYGFSVFGKTLKRGFKPDVVIF 113
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I C + A +L EM P+ + +L+ G+ + K + V K+ +M
Sbjct: 114 TTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVS 173
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+K V Y++ I+ CK+ K EA L DEM +G+ PN+VTY+ I C+ +
Sbjct: 174 KGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRD 233
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A+ +R M GLSP+ Y T++ CK G+ + L +E + P+ ++
Sbjct: 234 AQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIIN 293
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G+ + KV +AKE++ L+ E +V T+ + GL
Sbjct: 294 GMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGL 330
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ TYN +IKA C++ A + +M + P+ ++ L+ GF K+ +++
Sbjct: 210 GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEM 269
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ Q M+R +K + +Y + I+ +C+ RK +AK +L ++ +G+KP+ TY+ + G
Sbjct: 270 LVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDG 329
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G+ EA + +R M G P S Y ++ + D T + E +G+ +
Sbjct: 330 LCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYAD 389
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL 381
T L L G K+L+GL
Sbjct: 390 AVTRTFLKDFLPGNDS-PAIKQLLGL 414
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P + +NR++ + + S+ EM+ + IK N + L+ F +
Sbjct: 37 QPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFS 96
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
V + G K V ++ I +C++ K A LL EM G P+ VT + + G+C
Sbjct: 97 VFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYC 156
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G ++ +K + +M + GL P+ Y + CK + A+ E +G VPN
Sbjct: 157 SQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAV 216
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
T +L+ L A + +A+ L
Sbjct: 217 TYNTLIKALCQALRPRDAQVL 237
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+DR +P F L++ + +KYE V + + ME G+K V ++ I+ C L
Sbjct: 32 LDRNP-QPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHH 90
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
++ + L +G KP+ V ++ I G C+ G E A + M G P+ +
Sbjct: 91 VDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNS 150
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
++ C G + ++KG P+ + + G K+ EA EL + +
Sbjct: 151 LMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRG 210
Query: 386 FTKNVDTWNEIEAGLPQ 402
N T+N + L Q
Sbjct: 211 VVPNAVTYNTLIKALCQ 227
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 9/354 (2%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGI 94
P++S ++ L + S + R A L+P D SI N L N +
Sbjct: 90 PISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP----DLFTLSILANCLCNVNRVSEA 145
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
+ + R + N + I + A R F M + + + L+
Sbjct: 146 LAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKG 205
Query: 155 LTIAKDYKEVKRVFIEF---PKTYGI--KPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
L + ++ E YG+ KP + TY+ +I C+ A + EM
Sbjct: 206 LCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKA 265
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+ + P+ S+ L+ GF K++ + M G++ + ++V I +LCK K E
Sbjct: 266 QGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTE 325
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
AK LL+ M+ +G+ PN +TY+ I GFC G+ A++ + M + GL P+ Y T++
Sbjct: 326 AKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLIN 385
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
CK + A+ E + G PN TT +L+ GL KV +AK+L G++K
Sbjct: 386 GYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 167/373 (44%), Gaps = 11/373 (2%)
Query: 10 NLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTP 69
N+N+ + H L +S K + + L + E +++ E +A + P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMT 126
D +++S I+ A ++ +E+ +PD+ F L + +T
Sbjct: 271 ----DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT--FSVLIDTLCKEGKVT 324
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + + M + + ++ +N+L+ + D + +F+ P + G++PD +Y
Sbjct: 325 E-AKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMP-SKGLEPDEISYTT 382
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C++ A ++ EM + PN +++G L+ G +++ K D K+ +M+ YG
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + +Y + + LCK EA L +E+ S K N YS I G CK G E A
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + +S GL P+ Y M++ CK G + A ++ G P+ +L+ G
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 367 AGASKVSEAKELI 379
+K+ E +L+
Sbjct: 563 CEGNKLEEVIKLL 575
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 6/185 (3%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A+ M R P SSF L+ G K Y + + M G+ + ++ +
Sbjct: 75 AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC + + +EA A + +L +G PN VTY+ I G C + EA + + M G +P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESI------AKGWVPNFTTMKSLVTGLAGASKVS 373
N+ Y T++ +C+ G+ AL KE + P T ++ GL +
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254
Query: 374 EAKEL 378
EAKEL
Sbjct: 255 EAKEL 259
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 42/263 (15%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + ++NR++ + + S +S+ EM + P+ + L + +
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + R G V Y I LC + +EA L M G PN+VTY I G C+
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 299 DGNF-----------------------------------------EEAKKFYRIMSNSGL 317
GN +EAK+ + M G+
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T+++ C G ++ + E + +G P+ T L+ L KV+EAK+
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328
Query: 378 LIG-LVKEKFTKNVDTWNEIEAG 399
L+ +++ N+ T+N + G
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDG 351
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 8/147 (5%)
Query: 264 LRKC-------AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
LR C +A D M+ P +++ + G K ++ + Y M +G
Sbjct: 62 LRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAG 121
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
LSP+ + +C AL + +G++PN T +L+ GL ++SEA
Sbjct: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEAT 181
Query: 377 EL-IGLVKEKFTKNVDTWNEIEAGLPQ 402
L + + K T N T+ + GL Q
Sbjct: 182 RLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 43/366 (11%)
Query: 74 DRLAFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--- 124
D + FS +N ++SEA + + E+K RPDL + + L G+ +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAV---ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 125 -----MTEH------------------------AVRTFKEMDEHKLRHSVGAFNALLLAL 155
M E+ A+ F++M+E ++ SV ++ ++ +L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + +F E + GIK D+ TY+ +I C +L EM ++I P+
Sbjct: 256 CKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+F AL+ F KE K + ++ M G+ YN I CK EA + D
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M+SKG +P+ VTYS I +CK ++ + +R +S+ GL PN+ Y T+V C+ G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
A +E +++G P+ T L+ GL ++++A E+ + K + T + +N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 395 EIEAGL 400
I G+
Sbjct: 495 IIIHGM 500
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + FS I+ + + E+ TR + + I + + N A + F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + ++ L+ + AK + R+F E + G+ P+ TYN ++ FC+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQ 432
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S ++A + EM + + P+ ++G L+ G + ++ + M++ M G+ +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ IH +C K +A +L + KG+KP+ VTY+ I G CK G+ EA +R M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
G +P+ Y ++ G +++ +E G+ + +T+K ++ L+
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 13/324 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTF 133
+ +SI I+ L + F+ E++ + +S ++ G N + +
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKG--IKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + V F+AL+ E K ++ E T GI PD TYN +I FC+
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCK 362
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K +P+ ++ L+ + K ++ +D ++ + + G+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + C+ K AK L EM+S+G+ P+ VTY + G C +G +A + + M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S ++ +Y +++ MC + A FC S KG P+ T ++ GL +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS-DKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 373 SEAKELI------GLVKEKFTKNV 390
SEA L G + FT N+
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNI 565
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 4/262 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+ M + + + FN L A+ K Y V F + + GI+ D+ T +I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMI 112
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C A+S+L + +P+ +F LV GF E + + ++ M +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + I+ LC + +EA L+D M+ G +P+ VTY + CK GN A
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R M + + Y ++ +CK G ++ AL E KG + T SL+ GL
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 369 ASKVSEAKELIGLVKEKFTKNV 390
K + +++ +E +N+
Sbjct: 293 DGKWDDGAKML---REMIGRNI 311
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T++ ++ FC S A +++ M +P+ + L+ G + + +
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M YG + Y ++ LCK A A L +M + +K + V YS I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CKDG+F++A + M G+ + Y +++ +C G ++ +E I + +P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L+ K+ EAKEL ++ + T+N + G
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 153/358 (42%), Gaps = 46/358 (12%)
Query: 76 LAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN L + + L+ EL+ PD R GQ H +
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM-- 557
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M+ SV FN+ + IAK + +V + E G+ P+L TY +I +C
Sbjct: 558 -NKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM-SARGLSPNLVTYGALIAGWC 615
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A ++ EM + PN AL++ FYKE K ++ N VLQ + M G S
Sbjct: 616 KEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCS 675
Query: 253 --------------------------MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
M+NV I LCK + A+AK+L + + +K P++
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
TYS I+G G+ +EA +M ++GL+PN Y +++Y +CK G A+ +
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEA-------------KELIGLVKEKFTKNVD 391
+KG PN T +L+ K +EA +E I L+ + NVD
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVD 853
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 115 HSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
H+++ Y TE A R + + L +V + L+ +E +RV E +
Sbjct: 257 HAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKE 316
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T I D Y +I +C+ A + EM I N + ++ G K + E
Sbjct: 317 TGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRME 376
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+V KVLQ ME GM+ YN I C+ +A + M+ G+ ++TY+ +
Sbjct: 377 EVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFC ++A + + +M G++PN T++ + K G E AL KE++A+G
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLA 496
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
N T +++ GL +++EA+EL+ +KE
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKE 527
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 26/357 (7%)
Query: 44 AALTLLKSES--NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
AA LL S S P + R L P++ L F +A ++ S ++ +Q L L
Sbjct: 57 AAERLLASSSPLTPALLQAALRRVRLDPDAALH--LFRLAPSRPSLVSH----AQLLHIL 110
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE--HKLRHSVGAFNALLLALTIAK 159
+ RFH +L +++ HA F + E S +F+ LL A A
Sbjct: 111 A-----RARRFHDARALL---SSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAG 162
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
VF K G +P L + NR++ +S D A + +M + P+ +
Sbjct: 163 QLSSALNVFDGMGKV-GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTV 221
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ + ++ + + ++ ME G++ + Y+ + C + +A+ +L+ +
Sbjct: 222 AIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQR 281
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG-LSPNSSVYFTMVYFMCKGGDYE 338
KG+ PN VTY+ + G+CKDG EEA++ + M +G + + Y M+ C+ G +
Sbjct: 282 KGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMD 341
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFTKN 389
A E G N +++ GL ++ E +++ +G+ +K++ N
Sbjct: 342 DATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 134/313 (42%), Gaps = 6/313 (1%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ-NERF 112
+ +ILE + L+P + + +++ + + + ++E+K D+ +E
Sbjct: 271 DARRILESLQRKGLSP----NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ I Y Q + A R EM + + ++ +N ++ L +EV++V E
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM- 385
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G++PD +YN +I +C A+ + M R + ++ L+ GF
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+D ++ +M + G+ + + L K K +A L E L++G+ N +T++
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK G EA++ M P+S Y T+ CK G TA + G+
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565
Query: 353 VPNFTTMKSLVTG 365
P+ S +TG
Sbjct: 566 APSVEMFNSFITG 578
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ ++ T+N VI C+ + A +L M P++ ++ L G+ K +
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ ME G V M+N I ++ + + EM ++G+ PN VTY I G
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+CK+GN EA Y M N+G++PN + ++ K G + A
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +I C+S S A ++ ++ K I PN ++ L+ + KE K +
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ Q M G EA LLD+M+ + PN +TY I+G
Sbjct: 825 FKLKQKMVEEGYME-------------------EAIKLLDQMIENNVDPNYITYCTLIHG 865
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ K GN EE K Y M GL P + +
Sbjct: 866 YIKSGNMEEISKLYDEMHIRGLLPTNWI 893
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C+S + A S+ + K P+ ++ +L+ G ++ + +M
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN-- 301
G+ + YN I+ LCK K + A L +++ SKG+ PN +TY+ I +CK+G
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 302 --------------FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
EEA K M + + PN Y T+++ K G+ E E
Sbjct: 823 EAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882
Query: 348 IAKGWVP 354
+G +P
Sbjct: 883 HIRGLLP 889
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 5/283 (1%)
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
T P L+ F S++ +AN E F+ M E V +F ++ AL +
Sbjct: 182 TFPSLKTCNFXLSSLV---KANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKME 237
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+F++ K GI P++ TYN +I C++ +A+ + +M K ++PN ++GAL
Sbjct: 238 NAIELFMKMEK-LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGAL 296
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G K ++ VN +L M G V ++N I CK+ A + D M+SK +
Sbjct: 297 INGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNI 356
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P SVT + GFCK E A+ + +SGLS + +++V+++CK Y +A
Sbjct: 357 TPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFR 416
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
F K +++ + P+ + LV GL K EA EL + EK
Sbjct: 417 FTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 459
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L G + E A R KEM E L +NAL+L + R+ E K GI+
Sbjct: 475 LCGAGKLPE-ASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR-GIQ 532
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ TYN +++ C A + E + N ++G ++ G+ K + EDV +
Sbjct: 533 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 592
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+ +YN+ I + C+ A A LL+ M SKG+ PN TYS I+G C
Sbjct: 593 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCN 652
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G E+AK M G PN Y ++ CK G +TA E I+ PN T
Sbjct: 653 IGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFT 712
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++ G + +A L+ +KE +V T+N + G
Sbjct: 713 YTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 755
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 15/300 (5%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM--TE 127
+DR+ ++ I G + EE+ R PD+ + ++ +L G N+ +
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI-----YTYNFLLRGLCNVGKLD 552
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT--YN 185
A++ + E L ++ + ++ A ++V+ +F E K +L++ YN
Sbjct: 553 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK---KMELNSIVYN 609
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+IKA C++ + ++A +L M K I PN +++ +L+ G ED ++ M +
Sbjct: 610 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 669
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V Y I CKL + A++ EM+S + PN TY+ I G+CK GN E+A
Sbjct: 670 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 729
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M SG+ P+ Y + CK D + A C + +G + T +LV G
Sbjct: 730 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T N +I C + A I+ EM + + + ++ AL+ GF E K E ++ + M
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G++ + YN + LC + K +A L DE + G+ N TY + G+CK
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E+ + + + + + NS VY ++ C+ G+ AL + +KG +PN T SL
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ G+ V +AK LI + KE F NV + + G
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 4/317 (1%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
IN L + N+F+ ++ L+E+ N + I Y + E A++ M +
Sbjct: 297 INGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNI 356
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ +L+ + + + E + G+ D V+ C+ SA+
Sbjct: 357 TPTSVTLYSLMQGFCKSDQIEHAENALEEILSS-GLSIHPDNCYSVVHWLCKKFRYHSAF 415
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHS 260
M ++ +P+ LV G K+ K+ + ++ +++E+ S V+ N IH
Sbjct: 416 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT-SNALIHG 474
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LC K EA ++ EML +G+ + +TY+ I GFC +G E + M+ G+ P+
Sbjct: 475 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 534
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y ++ +C G + A+ E A G + N T ++ G A+++ + + L
Sbjct: 535 IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFN 594
Query: 381 -LVKEKFTKNVDTWNEI 396
L+ +K N +N I
Sbjct: 595 ELLSKKMELNSIVYNII 611
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 5/234 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A+ L H + I + +AN + EL ++ N + I + Q
Sbjct: 562 KASGLISNIH----TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 617
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A++ + M + + +++L+ + ++ K + E K G P++
Sbjct: 618 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE-GFVPNVV 676
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
Y +I +C+ +A S EM +I PN ++ ++ G+ K E N +L M
Sbjct: 677 CYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM 736
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ G+ V YNV + CK A + D+M ++G+ + +TY+ ++G+
Sbjct: 737 KESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG P+ T + + K FE+ + +R+MS G P+ + ++ +CKGG E
Sbjct: 180 KGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGKMEN 238
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-----KNVDTWN 394
A+ + G PN T ++ GL ++ A EL KEK T N+ T+
Sbjct: 239 AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL----KEKMTVKGVQPNLKTYG 294
Query: 395 EIEAGL 400
+ GL
Sbjct: 295 ALINGL 300
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T +A+ EM + V + LL A YK+ ++ E + G PD+ TYN
Sbjct: 176 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYN 234
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ C+ A L + +PN S+ ++ G E++ED +++ M +
Sbjct: 235 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 294
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V +N+ I LC+ A +L+++ G PNS++Y+ ++ FCK ++A
Sbjct: 295 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKA 354
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
F +M + G P+ Y T++ +C+ G+ + A+ + KG P + +++ G
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L A K EA EL+ +V + ++ T++ I AGL
Sbjct: 415 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 154/325 (47%), Gaps = 9/325 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L+ L + N +++
Sbjct: 216 KLLDEMRDKGCTP----DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT--VSYN 269
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+L G A E A EM + +V FN L+ L + V + PK
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK- 328
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P+ +YN ++ AFC+ A + L M + P+ S+ L+ + + +
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L ++ G + YN I L K K EA LL+EM+SKG++P+ +TYS
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C++ E+A + + + + G+ PN+ +Y ++ +CK + +A+ I G +P
Sbjct: 449 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 508
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N +T L+ GLA + EA++L+
Sbjct: 509 NESTYTILIEGLAYEGLIKEARDLL 533
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ EM + + +N ++ + + P +YG +P+ +YN
Sbjct: 212 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNI 270
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+K C + A ++ EM +K PN +F L++ ++ E +VL+ + +YG
Sbjct: 271 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
YN +H+ CK +K +A A LD M+S+G P+ V+Y+ + C+ G + A
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 390
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + G +P Y T++ + K G + AL E ++KG P+ T ++ GL
Sbjct: 391 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ +A G V++ + N +N I GL
Sbjct: 451 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 9/218 (4%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+PD T +IK S ++ A +LA + P+ ++ A++AG+ + V+
Sbjct: 95 RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAGQ---VDA 146
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ ++ + I LC + A A A+LDEML + P+ VTY+ + C
Sbjct: 147 ARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 206
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K +++A K M + G +P+ Y +V +C+ G + A+ F K + G PN
Sbjct: 207 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 266
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ ++ GL A + +A+EL+G + +K NV T+N
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++N LL AL + + +V + K G P L +YN VI ++ + A +L E
Sbjct: 372 SYNTLLTALCRSGEV-DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 430
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K ++P+ ++ + AG +E++ ED + ++ G++ +YN I LCK R+
Sbjct: 431 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 490
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A L M+ G PN TY+ I G +G +EA+ + + G V+
Sbjct: 491 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLI 550
Query: 327 MVYFM 331
V F+
Sbjct: 551 DVAFL 555
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A T+ A+ EM L+ + ++ + L ++ R F + + GI+P+
Sbjct: 417 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV-QDMGIRPNT 475
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN +I C+ ++ SA + A M PN S++ L+ G E ++ +L
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ G + + ++ + + L C+ A
Sbjct: 536 LCSRGEEILLDVHLIDVAFLTTFLPCSNANG 566
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 11/318 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN L +A F + +++ R PD+ + ++ I+ G M E A
Sbjct: 162 ITFTTLINGLCKAGEFAQALELFDDMVARGCQPDV-----YTYTTIINGLCKMGETAAAA 216
Query: 133 --FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
K+M E + V ++ L+ +L + E +F + K GI P + +Y +I+
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIF-SYMKAKGISPTVVSYTSLIQG 275
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C S A ++L EM +I P+ +F L+ F KE + VL+ M G++
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN +H + EA+ L D M+++G KP+ +YS I G+C +EAK+ +
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL+PN+ Y T+++ C+ G A K+ G++P+ T L+ G
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455
Query: 371 KVSEAKELIGLVKEKFTK 388
+ +A L ++ + K
Sbjct: 456 YLGKAFRLFRAMQGTYLK 473
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 4/288 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ L PD+ F I + N+ E A K M E + +V +N+L+ ++
Sbjct: 292 MTSLNIMPDIVT--FSLLIDIFCKEGNVLE-AQGVLKTMTEMGVEPNVITYNSLMHGYSL 348
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ E +++F + T G KPD+ +Y+ +I +C A + EM + + PN
Sbjct: 349 QMEVVEARKLF-DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S+ L+ F + K + ++ + M G + Y+V + CK +A L M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+KPN V Y+ I CK GN A+K + + GL P+ +Y T++ +CK G
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ AL ++ G PN + ++ G S A +LIG +++K
Sbjct: 528 DEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 1/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +F M K + FN LL A+ + Y + + + G+ P+ T N
Sbjct: 72 DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC +S+LA++ + ++P +F L+ G K ++ ++ M G
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V Y I+ LCK+ + A A L+ +M G +P+ VTYS I CKD EA
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+SP Y +++ +C ++ A E + +P+ T L+
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
V EA+ ++ + E + NV T+N + G
Sbjct: 312 CKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 74 DRLAFSIAINKLS-EANYF--NGISQYLEELKTRPDL--QNERFHAHSIILYGQANMTEH 128
D + FS+ I+ E N G+ + + E+ P++ N H +S+ Q + E
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL----QMEVVE- 354
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F M + V +++ L+ + K E K++F E G+ P+ +Y +I
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ-GLTPNTVSYTTLI 413
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AFC+ A + +M P+ ++ L+ GF K+ ++ + M+ +K
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ MY + I S+CK A+ L E+ G++P+ Y+ I G CK+G +EA +
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+R M G PN Y ++ + D A+ E KG+V +
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P + T+ +I C++ + + A + +M + +P+ ++ ++ G K +
Sbjct: 156 GLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + V Y+ I SLCK R EA + M +KG+ P V+Y+ I G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C ++EA M++ + P+ + ++ CK G+ A G K G PN
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
T SL+ G + +V EA++L ++ + K
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCK 368
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A M + L S+ NALL L A + +V EF GI P
Sbjct: 57 YKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR-EFMVGAGISP 115
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ +I+A+C+ + +A +L EM + N ++ L+AG + E+
Sbjct: 116 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 175
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME YG+ Y I+ LCK R+ EAKALLDEM +KPN V Y++ I GF ++
Sbjct: 176 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 235
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN +EA K + M +G+ PN Y +V +CK G + A K+ + P+ T
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 295
Query: 360 KSLVTG 365
++ G
Sbjct: 296 NLIIEG 301
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + EM E + +N L+ L + +E F + + YG+ PD TY
Sbjct: 134 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVPDGFTYGA 192
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+S S+ A ++L EM +KPN + L+ GF +E ++ K+++ M G
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ Y+ + LCK+ + A LL +M+ +P+++TY+ I G + N ++A
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAF 312
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M N+G+SPN Y M++ +C+ G+ E A +E KG PN L++G
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
VS A E+ + K ++ +N + GL
Sbjct: 373 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 109/204 (53%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P+ TY+ +++ C+ A +L +M R S +P+ ++ ++ G ++ +D
Sbjct: 252 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDA 311
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L ME G+ V Y++ IH LC+ + +A LL+EM +KG+KPN+ Y+ I G
Sbjct: 312 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 371
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++GN A + + M+ + P+ Y ++++ + K G E + + + +G +PN
Sbjct: 372 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 431
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G + A++L+
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLV 455
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 147/350 (42%), Gaps = 40/350 (11%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A ++P + +SI I+ L ++ S LEE+ T+ N +A I Y +
Sbjct: 321 AGISPNVY----TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
A F +M + + + +N+L+ L+ +E + F + + G+ P+ TY
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM-QERGLLPNEFTY 435
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN-------- 236
+ +I + ++ D SA ++ M +KPN + L+ ++K + E V+
Sbjct: 436 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 495
Query: 237 ---------------------------KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+VL +E+ G V +Y+ I LCK +
Sbjct: 496 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREK 555
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A +LDEM KG+ PN V Y+ I G CK G+ A+ + + GL PN Y +++
Sbjct: 556 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLID 615
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
CK GD A E +A G P+ L TG + A + +A LI
Sbjct: 616 GSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 665
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 12/348 (3%)
Query: 39 KDKTRA-ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY 97
KD RA A+ LL K+ E A ++P D +S I + F+ +
Sbjct: 90 KDLLRADAMALL------WKVREFMVGAGISP----DVYTYSTLIEAYCKVREFDTAKKV 139
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L E++ R N + I ++ E A K+M+++ L + AL+ L
Sbjct: 140 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 199
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
++ E K + E +KP++ Y +I F ++ A+ ++ EM ++PN
Sbjct: 200 SRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKI 258
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ LV G K + + + +L+ M R + YN+ I + +A LL EM
Sbjct: 259 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEM 318
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G+ PN TYS I+G C+ G E+A M+ GL PN+ VY ++ C+ G+
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
A + +P+ SL+ GL+ +V E+ + ++E+
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 426
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +++ E TFK M + + + L+ L+ + + + RV E K G P
Sbjct: 477 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN-GSVP 535
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ Y+ +I C+++D A+ IL EM +K + PN + AL+ G K V
Sbjct: 536 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 595
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ Y I CK+ + A L +EML+ G+ P++ YS G
Sbjct: 596 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 655
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A M G + SS + +V CK G + L + +G VPN T+
Sbjct: 656 GDLEQAMFLIEEMFLRGHASISS-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 714
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
+++++GL+ A K+SE + +++K
Sbjct: 715 ENIISGLSEAGKLSEVHTIFVELQQK 740
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P++ TY+ +I C+S + A +L EM K +KPNA + L++G+ +E
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + + + YN I L K+ + E+ +M +G+ PN TYS I+G
Sbjct: 382 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV--YF----------------------- 330
+ K+G+ E A++ + M ++GL PN +Y ++ YF
Sbjct: 442 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 501
Query: 331 ----------MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ G+ E A E G VP+ SL++GL K ++ ++ G
Sbjct: 502 NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLC---KTADREKAFG 558
Query: 381 LVKEKFTKNVD 391
++ E K VD
Sbjct: 559 ILDEMSKKGVD 569
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 43/255 (16%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+DTY + S A ++ M + + P+ AL+ + + + KV +
Sbjct: 54 VDTYKK-------SGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE 106
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G+ V Y+ I + CK+R+ AK +L EM +G N+VTY+ I G C+ G
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG-------------------------- 334
EEA F + M + GL P+ Y ++ +CK
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226
Query: 335 ---------GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKE 384
G+ + A KE +A G PN T +LV GL ++ A L+ +V++
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 286
Query: 385 KFTKNVDTWNEIEAG 399
+ T+N I G
Sbjct: 287 SHRPDTITYNLIIEG 301
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 136/331 (41%), Gaps = 32/331 (9%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMT--E 127
LD + I I+ LS + + L E++ + PD+ H +S ++ G E
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV-----HVYSSLISGLCKTADRE 554
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A EM + + ++ +NAL+ L + D + VF G+ P+ TY +
Sbjct: 555 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI-LAKGLVPNCVTYTSL 613
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C+ D S+A+ + EM I P+A + L G E +++ M G
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 673
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE--- 304
S +S +N + CK K E LL ++ +G+ PN++T + I G + G E
Sbjct: 674 AS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 732
Query: 305 -------------AKKFYRI---MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
A+ F + M N G P V M+ CK G+ + AL +
Sbjct: 733 IFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIV 791
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
AK ++ ++V L K+SEA L+
Sbjct: 792 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 822
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+G+ M E + +++M E+ + ++ +N L+ L A +RVF E ++ IKP
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 255
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +IK +C++ + A L M+ K ++ + ++ ++ Y + + +
Sbjct: 256 DVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALY 315
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M+ G++ +++ I LCK K E A+ + M+ KG KPN Y+ I G+ K
Sbjct: 316 QEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKT 375
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A + M + G +P+ Y +V +CK G E A+ + + G N
Sbjct: 376 GSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFY 435
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
SL+ GL A +V EA+ L + EK
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 113/269 (42%), Gaps = 12/269 (4%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVF-----IEFPKTYGIKPDLDTYNRVIKAFC 192
+ K H++ + +L+ L +AKD ++ + EFP T + P N +IK+F
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMT--VSPG----NSLIKSFG 198
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + +M I+P ++ L+ G + +V ++ME +K V
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVV 258
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I CK + +A L M +KG++ + +TY I D +F Y+ M
Sbjct: 259 TYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEM 318
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
GL + ++ +CK G + I KG PN L+ G A V
Sbjct: 319 DEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSV 378
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+A L+ ++ E F +V T++ + GL
Sbjct: 379 EDAIRLLHRMIDEGFNPDVVTYSVVVNGL 407
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 141/368 (38%), Gaps = 46/368 (12%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E++ E+ + + P D + ++ I +A + L ++T+ L+ ++
Sbjct: 242 ERVFEVMESGRIKP----DVVTYNTMIKGYCKAGQTQKALEKLRVMETK-GLEADKITYM 296
Query: 116 SII--LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
++I Y ++ + V ++EMDE L+ AF+ ++ L E VF +
Sbjct: 297 TMIQACYADSDFSS-CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIR 355
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G KP++ Y +I + ++ A +L M + P+ ++ +V G K + E
Sbjct: 356 K-GSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVE 414
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ Q G+ Y+ I L K + EA+ L +EM KG +S Y+ I
Sbjct: 415 EAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
Query: 294 YGFCKDGNF------------------------------------EEAKKFYRIMSNSGL 317
F K G EEA K + +M + G+
Sbjct: 475 DAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGI 534
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P ++ + +C G A E G + + + ++ L A ++ EA +
Sbjct: 535 TPTAACLRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACK 593
Query: 378 LIGLVKEK 385
L + E+
Sbjct: 594 LADGITER 601
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 1/208 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S+ +N L + Y + + N F++ I G+A + A R F
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM E +NAL+ A T E +F + G + TY +I +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFK 515
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K I P A+ AL G K K+L + G+ +
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAAC 575
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ I++LCK + EA L D + +G
Sbjct: 576 EDM-INTLCKAGRIKEACKLADGITERG 602
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P++ TYN +I +FC S S A +L M K I P+ +F AL+ F KE K +
Sbjct: 85 GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA 144
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M R+ + YN I CK + +AK +LD M SKG P+ VT+S I G
Sbjct: 145 EEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLING 204
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + + + M G+ N+ Y T+++ C+ GD + A E I+ G P+
Sbjct: 205 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 264
Query: 356 FTTMKSLVTGLAGASKVSEA 375
+ T ++ GL ++ +A
Sbjct: 265 YITFHCMLAGLCSKKELRKA 284
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 9/253 (3%)
Query: 136 MDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEF--PKTYG---IKPDLDTYNR 186
M E R +V FN L+ +L + + V R+ E P G IK D+
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ + +A ++ EM K I PN ++ ++ F ++ D +++L+ M
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + ++ I++ K RK +EA+ + EML + P ++TY+ I GFCK ++AK
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M++ G SP+ + T++ CK + + E +G V N T +L+ G
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240
Query: 367 AGASKVSEAKELI 379
+ A++L+
Sbjct: 241 CQVGDLDAAQDLL 253
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIA---KDYKEVKRVFIEFPKTYGIKPDLDTY 184
+A F EM E + +V +N ++ + + D ++ R IE I PD+ T+
Sbjct: 73 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE----KQINPDIVTF 128
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ +I AF + S A I EM R SI P ++ +++ GF K+++ +D ++L M
Sbjct: 129 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 188
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V ++ I+ CK ++ + EM +G+ N+VTY+ I+GFC+ G+ +
Sbjct: 189 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 248
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
A+ M + G++P+ + M+ +C
Sbjct: 249 AQDLLNEMISCGVAPDYITFHCMLAGLC 276
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + + M E ++ + F+AL+ A + E + ++ E + + I P TYN +I
Sbjct: 109 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR-WSIFPTTITYNSMI 167
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ A +L M K P+ +F L+ G+ K ++ ++ ++ M R G+
Sbjct: 168 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 227
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y IH C++ A+ LL+EM+S G+ P+ +T+ + G C +A
Sbjct: 228 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 287
Query: 309 YRIMSNSGLSPNSSVY-FTMVYFMCKGGD 336
+ S + P + F++ F+ G+
Sbjct: 288 LEDLQKSEVCPRLIFFLFSLCSFILGFGE 316
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 3/251 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F +M + + + +++L+ + + +KE + E + I+PD+ T++ +
Sbjct: 333 ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM-LSRNIRPDVVTFSIWV 391
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ S A SI+ M + ++PN ++ +L+ G+ + ++ KV +M G
Sbjct: 392 DVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCA 451
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN+ I CK + EAK L DEM KG+ PNS+T++ I G C+ G AK+
Sbjct: 452 PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLA 367
++ M + G P+ Y T++ CK G + AL E++ K + PN K L+ G+
Sbjct: 512 FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL-FEALKKSQLKPNHVICKILLGGMC 570
Query: 368 GASKVSEAKEL 378
A K+ +AKEL
Sbjct: 571 KAGKLEDAKEL 581
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ FN L+ L I E +++ + G +P + T+ ++ C+ +S+A
Sbjct: 173 SIITFNTLINGLCIEGRIVEAMEQ-LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+ +M +P S+ ++ K + + M G+ V YN I+ +C
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +A L EML MKP+ VT+S + CK+G EA + M + P+
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y ++++ +CK ++ + E +++ P+ T V VSEA+ +I L+
Sbjct: 352 YSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411
Query: 384 EK-FTKNVDTWNEIEAG 399
E+ NV T+N + G
Sbjct: 412 ERGLRPNVVTYNSLMDG 428
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 6/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTY 184
+ A+ F +M + FN LL AL K Y V ++ +EF +G+ + T
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEF---FGVSCSVYTL 142
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I C +S+L ++ + KP+ +F L+ G E + + + L +
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G + V + + ++ LCK+ K + A + +M+ +P V+YS I CK+ E
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M + G+SP Y +++Y MC G ++ A KE + P+ T LV
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L V EA + G +++ ++ T++ + G+
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ + +++ + S L E+ RPD+ ++ + M A
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVD---VFCKKGMVSEAQ 404
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M E LR +V +N+L+ + E ++VF + G PD+ +YN +IK
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF-DIMVNKGCAPDVLSYNILIKG 463
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C+S A + EM K + PN+ + L++G
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG------------------------- 498
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
LC+ + AK L +M S G P+ +TYS + GFCK G+ +EA +
Sbjct: 499 ----------LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ S L PN + ++ MCK G E A
Sbjct: 549 ALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 161/379 (42%), Gaps = 37/379 (9%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
R +L+S+ + L+ A D + + ++ LS+ G + L +
Sbjct: 165 RLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMT 224
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
R ++ ++ ++ Y +A M +A+R M + + + N + L +
Sbjct: 225 RRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLE 284
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+ R F+E K GI+PD+ +YN +IK +C+ A ++AEM K P+ S+ +
Sbjct: 285 KALR-FLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTV 343
Query: 223 VAGFYKEEKYEDVNKVLQMM------------------------------------ERYG 246
+A K+ K E+V ++++ M E G
Sbjct: 344 MAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKG 403
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
Y+ + S CK + +AK+L+ +M SKG P+ VTY+ I GFC+ G +EAK
Sbjct: 404 FHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAK 463
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + M G PN+ Y ++ +C G A S W PN T +++ GL
Sbjct: 464 KMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGL 523
Query: 367 AGASKVSEAKELIGLVKEK 385
K+SEA +L + EK
Sbjct: 524 RREGKLSEACDLTREMIEK 542
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 141/329 (42%), Gaps = 10/329 (3%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNE 110
N +IL + + A + P+ + + AI L + N ++LE +K PD+ +
Sbjct: 250 NALRILTLMQKAGVEPDLSI----CNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVS- 304
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ I Y + + A+ EM ++ ++ L + +EVKR+
Sbjct: 305 --YNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMEN 362
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ + PD TYN +I A + + A L E + K + + A+V F K +
Sbjct: 363 MVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNK 422
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ M G V Y I C++ K EAK +L +M G KPN+VTY+
Sbjct: 423 NIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYT 482
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ G C +G EA++ + +PN+ Y +++ + + G A +E I K
Sbjct: 483 VLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEK 542
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G++PN + L+ L V AK+ +
Sbjct: 543 GFLPNPVDINLLIQSLCRNQNVVGAKKYL 571
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ AL+ + + VF+ + G D Y+ V+ +FC++ + A S++ +M
Sbjct: 376 YNTLIYALS-KHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
K P+ ++ A++ GF + K ++ K+LQ M ++G K Y V ++ LC K
Sbjct: 435 YSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKS 494
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ +++ PN++TYS ++G ++G EA R M G PN +
Sbjct: 495 LEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLL 554
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ +C+ + A + +E + KG N S++ G + A ++
Sbjct: 555 IQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSML 606
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +E +E ++A++ + K+ + K + I+ + G PD+ TY
Sbjct: 390 DDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM-YSKGCNPDVVTYTA 448
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC A +L +M + KPN ++ L+ G K + +++ + E +
Sbjct: 449 IIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHW 508
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
Y+ +H L + K +EA L EM+ KG PN V + I C++ N AK
Sbjct: 509 WTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAK 568
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K+ + G + N + +++Y C+ GD + AL ++ P+ T +L L
Sbjct: 569 KYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDAL 628
Query: 367 AGASKVSEAKELI 379
S++ EA ELI
Sbjct: 629 GKKSRLDEASELI 641
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V + A++ E K++ + K +G KP+ TY ++ C + S A +
Sbjct: 442 DVVTYTAIIDGFCRVGKIDEAKKMLQQMYK-HGCKPNTVTYTVLLNGLCHNGKSLEAREM 500
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ + PNA ++ A++ G +E K E + +M+E+ + + V + N+ I SLC
Sbjct: 501 INVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDI-NLLIQSLC 559
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ + AK L+E L KG N V ++ IYGFC+ G+ + A M S P++
Sbjct: 560 RNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAI 619
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+ + K + A + + KG P T ++++ +V + +L+
Sbjct: 620 TYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLL 676
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 124/316 (39%), Gaps = 13/316 (4%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMT 126
H+D++ +S ++ + + + ++ ++ PD+ ++ I+ G +
Sbjct: 405 HIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVV-----TYTAIIDGFCRVGKI 459
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + ++M +H + + + LL L E R I + + P+ TY+
Sbjct: 460 DEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA-REMINVSEEHWWTPNAITYSA 518
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ S A + EM K PN L+ + + K L+ G
Sbjct: 519 VMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V + I+ C++ A ++L++M P+++TY+ K +EA
Sbjct: 579 CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEAS 638
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+ P Y +++ C+ G + + ++ IA+ P T ++ L
Sbjct: 639 ELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKL 696
Query: 367 AGASKVSEAKELIGLV 382
EA++L+G V
Sbjct: 697 CYFGNREEAEKLLGKV 712
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD TY + A + S A ++ +M K I P ++ A++ F + + +D+ K+
Sbjct: 616 PDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKL 675
Query: 239 LQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
L+ M+ R K+ +YN I LC EA+ LL ++L K ++ T I +
Sbjct: 676 LEKMIARQPFKT---VYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYL 732
Query: 298 KDGNFEEAKKFYRIMSNSGLSPN 320
DGN A K M L P+
Sbjct: 733 IDGNALSAYKVACQMFRRNLIPD 755
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 1/255 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A++ F +M ++ + N LL VKR F + G KP + TY
Sbjct: 40 MVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGA-GAKPTVFTY 98
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ D +A + EM + + P+ ++ +++ GF K + +D + M+
Sbjct: 99 NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 158
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ V YN I+ CK K + EM G+KPN V+YS + FCK+G ++
Sbjct: 159 MCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQ 218
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A KFY M GL PN Y +++ CK G+ A E + G N T +L+
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALID 278
Query: 365 GLAGASKVSEAKELI 379
GL G +E L+
Sbjct: 279 GLCGWENPTEGLHLL 293
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 2/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++I I+ + + EE+K R + + + I +G+ + V F+E
Sbjct: 96 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEE 155
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + V +NAL+ + F E K G+KP++ +Y+ ++ AFC+
Sbjct: 156 MKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM-KRNGLKPNVVSYSTLVDAFCKEG 214
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +M R + PN ++ +L+ + K D ++ M + G++ V Y
Sbjct: 215 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYT 274
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSN 314
I LC E LLDEM+ +K VT+ I G CK+ +A ++ RI ++
Sbjct: 275 ALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISND 334
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
GL N+++Y M+ +CKG E A ++ KG VP+ T SL+ G V E
Sbjct: 335 FGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLE 394
Query: 375 AKEL 378
A L
Sbjct: 395 ALAL 398
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 6/215 (2%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P ++ + + A ++M R + P S L+ F K K + V +
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G K V YN+ I +CK A+ L +EM +G+ P++VTY+ I GF K
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G ++ F+ M + P+ Y ++ CK G L F +E G PN +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 359 MKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
+LV + +A + +GLV ++T
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 237
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 143/344 (41%), Gaps = 43/344 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ + + + EE+K PD+ + +G+ +
Sbjct: 129 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK---LPKGL 185
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F+EM + L+ +V +++ L+ A ++ + +++ + G+ P+ TY +I A
Sbjct: 186 EFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDA 244
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK-EEKYEDVNKVLQMME------ 243
+C+ + S A+ + EM + ++ N ++ AL+ G E E ++ + +M+E
Sbjct: 245 YCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVT 304
Query: 244 -----------------------------RYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+G+++ ++Y I LCK + A L
Sbjct: 305 VVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLF 364
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
++M KG+ P+ Y+ + G K GN EA M +G+ + Y ++V+ +
Sbjct: 365 EQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHC 424
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ A F +E I +G P+ S++ ++EA EL
Sbjct: 425 NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVEL 468
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 67/170 (39%)
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
R P F AL + E+ + M+R+ + N +H KL K
Sbjct: 18 RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
K +M+ G KP TY+ I CK+G+ E A+ + M GL P++ Y +M+
Sbjct: 78 GVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMI 137
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
K G + + F +E P+ T +L+ K+ + E
Sbjct: 138 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF 187
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G T+ A +M++ KL V + ++ L K +
Sbjct: 218 QPDLVTYGVVVNGLCKRGD---TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDD 274
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GI+P++ TY+ +I C S A +L++M + I P+ +F AL+
Sbjct: 275 ALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ V+YS I GFCK +E + +R MS GL N+ Y T++ + + GD + A
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
KE ++ G PN T +L+ GL K+ +A + L + K + T+N + G+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 9/316 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
L ++ I+ L + + + +E++T RP++ + YG+ + A R
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRL 313
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M E K+ V F+AL+ A E ++++ E K I P + TY+ +I FC
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFC 372
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A + M K P+ S+ L+ GF K ++ ++ ++ + M + G+
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I L + C A+ + EM+S G+ PN +TY+ + G CK+G E+A + +
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGS 551
Query: 372 VSEAKELIGLVKEKFT 387
EA L +KE T
Sbjct: 552 KEEADALFKEMKEDGT 567
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F EM + + S+ F+ LL A IAK K +V E + G+ + TY+
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC S A ++L +M + +PN + +L+ G+ ++ + ++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +N IH L K +EA AL+D M++KG +P+ VTY + G CK G+ + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M L P +Y T++ +CK + AL KE KG PN T SL++
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K +V T++ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + AV +M + + FN L+ L + E I+ G +P
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVAKGCQP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D+ A+ +L +M++ ++P + ++ G K + +D +
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLF 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLC-----------------------------------KL 264
+ ME G++ V Y+ I LC K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA+ L DEM+ + + P+ VTYS I GFC +EAK+ + M + P+ Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSY 399
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVK 383
T++ CK + + +E +G V N T +L+ GL A A+E+ +V
Sbjct: 400 STLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459
Query: 384 EKFTKNVDTWNEIEAGL 400
+ N+ T+N + GL
Sbjct: 460 DGVPPNIMTYNTLLDGL 476
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+ M V +++ L+ AK E +F E + G+ + TY
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTT 436
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I EM + PN ++ L+ G K K E V + ++R
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KP+ V Y+ I GFC+ G+ EEA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 615
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ T + ++ +C S S A +++ +M +PN +F L+ G + K +
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + + Y V ++ LCK A LL++M ++P + Y+ I G
Sbjct: 206 VALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDG 265
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ + ++A ++ M G+ PN Y +++ +C G + A + I + P+
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ EA++L +VK ++ T++ + G
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 5/283 (1%)
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
T P L+ F S++ +AN E F+ M E V +F ++ AL +
Sbjct: 205 TFPSLKTCNFLLSSLV---KANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKME 260
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+F++ K GI P++ TYN +I C++ +A+ + +M K ++PN ++GAL
Sbjct: 261 NAIELFMKMEK-LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGAL 319
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G K ++ VN VL M G V ++N I CK+ A + D M+SK +
Sbjct: 320 INGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNI 379
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P SVT + GFCK E A+ + +SGLS + +++V+++CK Y +A
Sbjct: 380 TPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFR 439
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
F K +++ + P+ + LV GL K EA EL + EK
Sbjct: 440 FTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L G + E A R KEM E L +NAL+L + R+ E K GI+
Sbjct: 498 LCGAGKLPE-ASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR-GIQ 555
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ TYN +++ C A + E + N ++G ++ G+ K + EDV +
Sbjct: 556 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 615
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+ +YN+ I + C+ A A LL+ M SKG+ PN TYS I+G C
Sbjct: 616 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCN 675
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G E+AK M G PN Y ++ CK G +TA E I+ PN T
Sbjct: 676 IGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFT 735
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++ G + +A L+ +KE +V T+N + G
Sbjct: 736 YTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 778
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 15/300 (5%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM--TE 127
+DR+ ++ I G + EE+ R PD+ + ++ +L G N+ +
Sbjct: 521 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI-----YTYNFLLRGLCNVGKLD 575
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT--YN 185
A++ + E L ++ + ++ A ++V+ +F E K +L++ YN
Sbjct: 576 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK---KMELNSIVYN 632
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+IKA C++ + ++A +L M K I PN +++ +L+ G ED ++ M +
Sbjct: 633 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 692
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V Y I CKL + A++ EM+S + PN TY+ I G+CK GN E+A
Sbjct: 693 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 752
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M SG+ P+ Y + CK D + A C + +G + T +LV G
Sbjct: 753 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T N +I C + A I+ EM + + + ++ AL+ GF E K E ++ + M
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G++ + YN + LC + K +A L DE + G+ N TY + G+CK
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E+ + + + + + NS VY ++ C+ G+ AL + +KG +PN T SL
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ G+ V +AK LI + KE F NV + + G
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 4/317 (1%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
IN L + N+F+ ++ L+E+ N + I Y + E A++ M +
Sbjct: 320 INGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNI 379
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ +L+ + + + E + G+ D V+ C+ SA+
Sbjct: 380 TPTSVTLYSLMQGFCKSDQIEHAENALEEILSS-GLSIHPDNCYSVVHWLCKKFRYHSAF 438
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHS 260
M ++ +P+ LV G K+ K+ + ++ +++E+ S V+ N IH
Sbjct: 439 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT-SNALIHG 497
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LC K EA ++ EML +G+ + +TY+ I GFC +G E + M+ G+ P+
Sbjct: 498 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 557
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y ++ +C G + A+ E A G + N T ++ G A+++ + + L
Sbjct: 558 IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFN 617
Query: 381 -LVKEKFTKNVDTWNEI 396
L+ +K N +N I
Sbjct: 618 ELLSKKMELNSIVYNII 634
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 5/234 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A+ L H + I + +AN + EL ++ N + I + Q
Sbjct: 585 KASGLISNIH----TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 640
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A++ + M + + +++L+ + ++ K + E K G P++
Sbjct: 641 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE-GFVPNVV 699
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
Y +I +C+ +A S EM +I PN ++ ++ G+ K E N +L M
Sbjct: 700 CYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM 759
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ G+ V YNV + CK A + D+M ++G+ + +TY+ ++G+
Sbjct: 760 KESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG P+ T + + K FE+ + +R+MS G P+ + ++ +CKGG E
Sbjct: 203 KGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGKMEN 261
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-----KNVDTWN 394
A+ + G PN T ++ GL ++ A EL KEK T N+ T+
Sbjct: 262 AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL----KEKMTVKGVQPNLKTYG 317
Query: 395 EIEAGL 400
+ GL
Sbjct: 318 ALINGL 323
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 3/291 (1%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
E F+A + L+ + N TE + EM K++ +V FN ++ L K+ K FI
Sbjct: 202 ETFNAM-LSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKD-FI 259
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+ G+KP++ TYN VI +C A +L M + ++P++ ++G+L++G K
Sbjct: 260 GSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKG 319
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
K E+ + +L+ M+ G+ YN I C +A DEM+ + + P TY
Sbjct: 320 GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTY 379
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ I+ +G +EA + M +SG+ P+S Y ++ C+ G+ + A E I+
Sbjct: 380 NLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMIS 439
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
KG P T SL+ L+ +++ A +L +++E + ++ +N + G
Sbjct: 440 KGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDG 490
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 6/224 (2%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ P ++T+N ++ F + + + + + + AEM R IK +F ++ KE K
Sbjct: 193 KEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKL 252
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + ME G+K V YN IH C + A+ +LD M ++G++P+S TY
Sbjct: 253 KKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSL 312
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK G EEA M GL P + Y T++ C GD A G+ E + +
Sbjct: 313 ISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI 372
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
+P +T L+ L K+ EA +I G+V + T N+
Sbjct: 373 LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNI 416
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 4/227 (1%)
Query: 152 LLALTIAKDYKEVKRVFIEFPKT---YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
LL TI VK VF E T G K + ++ +I+A CE A+ M
Sbjct: 135 LLKQTIESRVAGVKDVFHELAITRDRLGTKSSI-VFDMLIRACCELKRGDDAFECFDMMK 193
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
K + P +F A+++ F K + E V + M R +KS V +N+ I+ LCK K
Sbjct: 194 EKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLK 253
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+AK + M + G+KPN VTY+ I+G+C G E A+ IM N G+ P+S Y +++
Sbjct: 254 KAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLI 313
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
MCKGG E A G ++ G +P T +L+ G + +A
Sbjct: 314 SGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 13/315 (4%)
Query: 77 AFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
F+I IN KL +A F G +E L +P++ H Y E A
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIG---SMENLGVKPNVVTYNTVIHG---YCSRGRVEGAR 291
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M + + +L+ + +E + +E K G+ P TYN +I
Sbjct: 292 MVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGI-LEKMKEIGLLPTAVTYNTLIDG 350
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C D A+ EM R++I P S++ L+ + E K ++ + +++ M G+
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPD 410
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I+ C+ +A L DEM+SKG++P VTY+ IY K + A +
Sbjct: 411 SITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFE 470
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ G SP+ ++ ++ C G+ + A KE + VP+ T +L+ G
Sbjct: 471 KIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREG 530
Query: 371 KVSEAKELIGLVKEK 385
KV EA+EL+ +K +
Sbjct: 531 KVEEARELLKEMKRR 545
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + +V +N L+ AL + E + + + GI PD TYN +I +C
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-GIVPDSITYNILINGYCRC 424
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ A+++ EM K I+P ++ +L+ K + + + + + + R G + M+
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I C A ALL EM + + P+ VTY+ + G C++G EEA++ + M
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ Y T++ K GD A E ++ G+ P T +L+ GL +
Sbjct: 545 RGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDL 604
Query: 375 AKELIGLVKEKFTKNV 390
A+EL+ KE +K +
Sbjct: 605 AEELL---KEMVSKGI 617
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A EM ++ ++ + +L+ L+ K +F + + G P
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE-GASP 479
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL +N +I C + + A+++L EMD+++I P+ ++ L+ G +E K E+ ++L
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+R G++ YN I K +A + DEMLS G P +TY+ I G CK+
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKN 599
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ A++ + M + G++P+ S YF+++ + K D A
Sbjct: 600 QQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 36/177 (20%)
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF---------- 292
+R G KS + ++++ I + C+L++ +A D M KG+ P T++
Sbjct: 159 DRLGTKSSI-VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQT 217
Query: 293 ------------------IYGF-------CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+Y F CK+G ++AK F M N G+ PN Y T+
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTV 277
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
++ C G E A +G P+ T SL++G+ K+ EA ++ +KE
Sbjct: 278 IHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKE 334
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 39/347 (11%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVR 131
+D F++ IN + + Q++ ++ + L + F + S IL Y ++ + A R
Sbjct: 190 MDIYTFNLMINVYCKMGFVKEAKQFMCKM-IQAGLSPDYFTSTSFILGYCRSKDVDSAFR 248
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE------FPKTY---------- 175
F+EM R+ V ++N L+ L A E +F+ +P Y
Sbjct: 249 VFEEMPN---RNEV-SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC 304
Query: 176 -----------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ PDL TYN +I C + SAY +L+ M + + P+ +
Sbjct: 305 RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRT 364
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+G + K + E+ ++ + G+ + V MY+V I CK+ K EA L ++ML
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKML 424
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
SK PN+ T++ I+G C GN +EA + M GL P + ++ M K GD++
Sbjct: 425 SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFD 484
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
A ++ ++ G P T + + A KV EA++++ +KE+
Sbjct: 485 DAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEE 531
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 11/282 (3%)
Query: 98 LEELKTR---PDLQNERFHAHSIILYGQ--ANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
L+E+ R PDL ++ ++ GQ A + A R M E L + +
Sbjct: 315 LDEMLERNLVPDLI-----TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFI 369
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
L + +E +R+F + G+ ++ Y+ +I +C+ A + +M K+
Sbjct: 370 DFLCKSNRVEEARRLFDSLTEE-GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNC 428
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
PNA +F AL+ G ++ + M + G+K V +N+ I + K +A
Sbjct: 429 SPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHK 488
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L +M+S G KP + TY+ FI +C G +EA+ M G+ P+ Y +++
Sbjct: 489 CLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYG 548
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
K G +A K P+ T SL+ L V E
Sbjct: 549 KLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVE 590
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 30/261 (11%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+NA + A +E + + ++ K G+ PD TY +IKA+ + + SA+ +L
Sbjct: 504 TYNAFIEVYCSAGKVQEAEDMMVQM-KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS 562
Query: 207 MDRKSIKPNASSFGALV-----------------------------AGFYKEEKYEDVNK 237
M +P+ +F +L+ + +K +++ V +
Sbjct: 563 MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIE 622
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ + ME++G Y I +CK+ A LLD+M +G+ P+ + ++ I C
Sbjct: 623 LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCC 682
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K + EA M SG SP T++ + + G+ E K+ G+ +
Sbjct: 683 KLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEI 742
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
K L+ G+ V E +L
Sbjct: 743 AWKILIDGMLKQGLVEEFSQL 763
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 113/278 (40%), Gaps = 51/278 (18%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+H+V ++ +LL + K +V ++ + +IK + D+
Sbjct: 97 FKHNVDSYASLLTLIDHHKIVSDVPKIIVS----------------MIKCCYSAPDALFV 140
Query: 201 YSILAEMDRKSI-KPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRI 258
I +M + I K + + L+ + +++N++ +M+E + + + +N+ I
Sbjct: 141 SDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEF-VSMDIYTFNLMI 199
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD------------------- 299
+ CK+ EAK + +M+ G+ P+ T + FI G+C+
Sbjct: 200 NVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV 259
Query: 300 ------------GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
G +EA + M + PN Y ++ +C+ + A+G E
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEM 318
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + VP+ T SL+ G A + A L+ L+KE+
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKER 356
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
++ V +F E K +G PD Y ++I C+ + A +L +M ++ I P+ F
Sbjct: 616 EFDIVIELFEEMEK-HGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVF 674
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
A+++ K +KY + +++ M G + I L + + ++ ++
Sbjct: 675 NAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRG 734
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
G + + + I G K G EE + + M +G + + Y
Sbjct: 735 CGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTY 779
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 1/162 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
+ F+EM++H + L+ + ++ ++ + K GI P +N VI
Sbjct: 620 VIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKE-GISPSEMVFNAVI 678
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A +I+ +M P L+ G Y+E + E N V + + G
Sbjct: 679 SCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYN 738
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + I + K E L +EM G + TYS
Sbjct: 739 DDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYS 780
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 5/270 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L + + AVR + + ++ + N +LL L + V+R+F P
Sbjct: 143 LLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----- 197
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ T+N VI C+ + A ++ M P+ ++ +L+ G+ K E+V ++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + G + V YN I+ K + +A + EM +G+ N VT+S F+ FCK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +EA K + M G+ PN Y ++V CK G + A+ E + +G VPN T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+V GL KV+EA ++ L++ K
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVK 407
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F EM + +V F+ + A +E ++F + + G+ P+ TY
Sbjct: 287 EKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM-RVRGMMPNEFTYTS 345
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C++ A +L EM + + PN ++ +V G KE K + + VL +MER G
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K+ +Y IH A LL++M +KGM+ + Y I+G CKD +EAK
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M+ GL PN+ +Y T++ + K G A+ + + G+ PN T +L+ GL
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525
Query: 367 AGASKVSEA 375
A +SEA
Sbjct: 526 CKAGSISEA 534
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M V +N+L+ D +EV+++ E K+ G D+ TYN +I F
Sbjct: 223 FVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKS-GCAADVVTYNALINCFS 281
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ AYS EM R+ + N +F V F KE ++ K+ M GM
Sbjct: 282 KFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEF 341
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + CK + +A LLDEM+ +G+ PN VTY+ + G CK+G EA +M
Sbjct: 342 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLM 401
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ N +Y T+++ + E AL + KG + + +L+ GL KV
Sbjct: 402 ERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461
Query: 373 SEAKELI 379
EAK L+
Sbjct: 462 DEAKSLL 468
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 1/300 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ FS ++ + + +++ R + NE + + +A + A+ E
Sbjct: 306 VTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M L +V + ++ L E V + + G+K + Y +I ++
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV-LSLMERGGVKANELLYTTLIHGHFMNN 424
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+S A +L +M K ++ + S +G L+ G K++K ++ +L M G++ +Y
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +L K K +EA ALL ++L G +PN VTY I G CK G+ EA + M
Sbjct: 485 TIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL 544
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL PN Y ++ CK G A+ E I KG + SL+ G + + +A
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 1/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN S+ Y E+K + + N + + + + + + A++ F
Sbjct: 269 DVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLF 328
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + + + +L+ A + + E G+ P++ TY ++ C+
Sbjct: 329 AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCK 387
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++L+ M+R +K N + L+ G + E +L M+ GM+ VS+
Sbjct: 388 EGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSL 447
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I LCK +K EAK+LL +M G++PN+V Y+ + K G EA +
Sbjct: 448 YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKIL 507
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+SG PN Y ++ +CK G A+ + G PN +L+ G ++
Sbjct: 508 DSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLN 567
Query: 374 EAKELIGLVKEK 385
+A L+ + +K
Sbjct: 568 KAMHLMNEMIDK 579
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 1/255 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N +E A+ +M + V + L+ L + E K + + G++P+
Sbjct: 424 NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGC-GLRPNTVI 482
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y ++ A ++ S A ++L ++ +PN ++ AL+ G K + M
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ V Y I CK+ +A L++EM+ KGM + V Y+ I G+ K N +
Sbjct: 543 ELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQ 602
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M SGL + Y + C + A G E I G P+ T L+
Sbjct: 603 DAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Query: 364 TGLAGASKVSEAKEL 378
+ EA L
Sbjct: 663 RKYQKLGNMEEASSL 677
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A AV ++ + + +V + AL+ L A E F + + G+ P++
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM-RELGLDPNV 550
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y +I FC+ + A ++ EM K + + + +L+ G+ K+ +D +
Sbjct: 551 QAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTK 610
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G++ + Y I C + EA+ +L EM+ G+ P+ Y+ I + K GN
Sbjct: 611 MIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGN 670
Query: 302 FEEAKKF 308
EEA
Sbjct: 671 MEEASSL 677
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 167/360 (46%), Gaps = 3/360 (0%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L LLKSE NP + +A P + + + +LSE N +S+ +E ++
Sbjct: 11 KHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIR 70
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDY 161
++ +E I YG+ +M + A+ FK M E ++ ++N LL A AK +
Sbjct: 71 SQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQW 130
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+V+ +F F +T G+ P+L TYN +IK C+ + A L M ++ KP+ S+
Sbjct: 131 VKVESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYST 189
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML-SK 280
++ K K +D ++ M G+ V+ YN+ I K + A L D +L
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ PN T++ I G K G ++ K + M + + Y ++++ +C G+ + A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
E + + T +++ G K+ E+ EL +++ K + N+ ++N + GL
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGL 369
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 129/307 (42%), Gaps = 16/307 (5%)
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNER---FHAHSIILYG--QANMTEHAVRTF 133
+I I+ LS+ + + E +K QNER + +S +++G A + A F
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMK-----QNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAF 191
E+DE K V +N +L KE ++ +E + I +YN +IK
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV----SYNILIKGL 369
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
E+ A I M K + +++G + G V+Q +E G V
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I LCK ++ EA L+ EM G++ NS + I G +D EA F R
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M +G P Y ++ +CK G + A F KE + GW P+ T L+ GL K
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 372 VSEAKEL 378
+ A EL
Sbjct: 550 IDLALEL 556
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 5/296 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D+ + I I+ L Y N ++E+++ + +A I + E A
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM +H + + NAL+ L E E K G +P + +YN +I C+
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN-GCRPTVVSYNILICGLCK 511
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + + EM KP+ ++ L+ G ++ K + ++ + G+++ V M
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ IH LC + K +A ++ M + N VTY+ + GF K G+ A + M
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMY 631
Query: 314 NSGLSPNSSVYFTMV--YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
GL P+ Y T++ MC+G Y A+ F ++ G P T LV +
Sbjct: 632 KMGLQPDIISYNTIMKGLCMCRGVSY--AMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ Y +I C+ A +++ EM + ++ N+ AL+ G ++ + + + L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + G + V YN+ I LCK K EA A + EML G KP+ TYS + G C+D
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ A + + SGL + ++ +++ +C G + A+ + N T
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ G + A + G + K ++ ++N I GL
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 2/264 (0%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
EHK ++ ++N L+ L E ++ P G D TY I C +
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNGYV 410
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A ++ E++ + ++ +++ K+++ E+ + +++ M ++G++ + N
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I L + + EA L EM G +P V+Y+ I G CK G F EA F + M +G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ +C+ + AL + + G + L+ GL K+ +A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 378 LIGLVKEK-FTKNVDTWNEIEAGL 400
++ ++ + T N+ T+N + G
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGF 614
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 5/281 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H + + G N A+ +E++ V A+ +++ L K +E + E K
Sbjct: 402 HGLCVNGYVN---KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK- 457
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G++ + N +I S A L EM + +P S+ L+ G K K+ +
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ ++ M G K + Y++ + LC+ RK A L + L G++ + + ++ I+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C G ++A M + + N Y T++ K GD A G P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ + +++ GL VS A E + V TWN
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G T+ A +M++ KL V +N ++ L K +
Sbjct: 13 QPDLVTYGVVVNGLCKRGD---TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 69
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GI+P++ TY+ +I C S A +L++M + I P+ +F AL+
Sbjct: 70 ALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 128
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 188
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VTY+ I GFCK EE + +R MS GL N+ Y ++ + + GD + A
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
KE ++ G PN T +L+ GL K+ +A + L + K + T+N + G+
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
L ++ I+ L + + + +E++T RP++ + YG+ + A R
Sbjct: 52 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRL 108
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M E K+ V F+AL+ A E ++++ E K I P + TY+ +I FC
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFC 167
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A + M K P+ ++ L+ GF K ++ E+ +V + M + G+
Sbjct: 168 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 227
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ I L + C A+ + EM+S G+ PN +TY+ + G CK+G E+A + +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGS 346
Query: 372 VSEAKELIGLVKEKFT 387
EA L +KE T
Sbjct: 347 KEEADALFKEMKEDGT 362
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+ M V +N L+ K +E VF E + G+ + TYN
Sbjct: 173 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNI 231
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I EM + PN ++ L+ G K K E V + ++R
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KP+ V Y+ I GFC+ G+ EEA
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 351
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 352 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 410
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 36/261 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PDL TY V+ C+ D+ A+++L +M++ ++P + ++ G K + +D
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLC--------------------------------- 262
+ + ME G++ V Y+ I LC
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 263 --KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
K K EA+ L DEM+ + + P+ VTYS I GFC +EAK+ + M + P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y T++ CK E + +E +G V N T L+ GL A A+E+
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
+V + N+ T+N + GL
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGL 271
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+++ M K +P+ ++G +V G K + +L ME+ ++ GV +YN I L
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK + +A L EM +KG++PN VTYS I C G + +A + M ++P+
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG- 380
+ ++ K G A E + + P+ T SL+ G ++ EAK++
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 381 LVKEKFTKNVDTWNEIEAGL 400
+V + +V T+N + G
Sbjct: 182 MVSKHCFPDVVTYNTLIKGF 201
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 121/229 (52%), Gaps = 5/229 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TY +I+ C+++D +A +L EM I+PN + L+ G+ K ++E V
Sbjct: 124 GVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESV 183
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV + M G++ V MY I SLC+ K +A ++D M +G++PN VTY+ I
Sbjct: 184 GKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINS 243
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-- 353
CK+G+ EA + MS G+ P+ Y T++ + + + A+ +E + +G
Sbjct: 244 MCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE-MMQGETRV 302
Query: 354 -PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
P+ T S++ GL + +A ++ ++ E + N+ +N + GL
Sbjct: 303 RPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P+ +Y +++A C ++ A +L M ++P+ ++G L+ G + +
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M G++ V +Y+ +H CK + + +EM +G++P+ V Y+ I C
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ G ++A + +M+ GL PN Y ++ MCK G AL K KG P+
Sbjct: 211 RHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVV 270
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK---NVDTWNEIEAGL 400
T +L+TGL+ ++ EA L+ + + T+ ++ T+N + GL
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGL 316
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 4/225 (1%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMD---RKSIKPNASSFGALVAGFYKEEKYEDVN 236
D +YN V+ A C +A +L M R + +PNA S+ L+ + +
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L+ M+ G++ V Y I LC A LL+EM G++PN V YS ++G+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +E K + MS G+ P+ +Y ++ +C+ G + A +G PN
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T L+ + V EA +L + EK + +V T+N + GL
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 15/268 (5%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S ++ + + + + EE+ R PD+ S+ +G+ + A R
Sbjct: 165 VVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGK---VKKAARV 221
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDTYNRVIK 189
M E L +V +N L+ ++ +E ++ K G++PD+ TYN +I
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREA----LDLRKNMSEKGVQPDVVTYNTLIT 277
Query: 190 AFCESSDSSSAYSILAEM--DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ A ++L EM ++P+ +F +++ G K +V MM G
Sbjct: 278 GLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ + +N+ I L ++ K +A L+DEM S G++P+S TYS I GFCK E A+
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ M + G+ P Y ++ MC G
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQG 425
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 106 DLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
D+ ER +++ Y + A+ K M E ++ V +N L+ L+
Sbjct: 223 DMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSV 282
Query: 159 KDYKEVKRVFIEFPK-TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ E + E + ++PDL T+N VI C+ A + A M + N
Sbjct: 283 LEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLV 342
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+F L+ G + K + +++ M G++ Y++ I+ CK+R+ A++ L EM
Sbjct: 343 AFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEM 402
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+GM+P V Y + C G +A+ + M + +++ Y TM++ K G+
Sbjct: 403 RHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEK 461
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ A F K+ I +G +P+ T + A + ++ A+ ++ + F +V ++ +
Sbjct: 462 KIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSL 521
Query: 397 EAG 399
G
Sbjct: 522 IQG 524
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 11/302 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL-----KTRPDLQNERFHAHSIILYGQANMTEH 128
D + ++ I LS + LEE+ + RPDL H + G
Sbjct: 268 DVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGW---MRQ 324
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ M E+ R ++ AFN L+ L K+ + E + G++PD TY+ +I
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASS-GLQPDSFTYSILI 383
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ A S L+EM + ++P + L+ + + M+R K
Sbjct: 384 NGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCK 442
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ IH K + A+ L +M+ +G+ P++VTYS I F K G+ A++
Sbjct: 443 LDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERV 502
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M+ SG P+ +V+ +++ GD E L +E AK + + ++VT L G
Sbjct: 503 LKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL-G 561
Query: 369 AS 370
AS
Sbjct: 562 AS 563
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 2/262 (0%)
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
K V +NAL+ + +KE + E G+ P++ +Y+ VI + +
Sbjct: 239 KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDR-GVDPNVISYSTVISCLSDMGNVEL 297
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
+ ++ M + +PN +F +L+ GF+ + D + +M R G+ V YN IH
Sbjct: 298 SLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIH 357
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC EA ++ ++M ++PN TYS IYGF K G+ A + + M N G P
Sbjct: 358 GLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRP 417
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N VY MV +C+ ++ A I+ G P T + + GL A +V A ++
Sbjct: 418 NVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVL 477
Query: 380 G-LVKEKFTKNVDTWNEIEAGL 400
+ K + N+ T+NE+ GL
Sbjct: 478 DQMEKYECLPNIRTYNELLDGL 499
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 42/326 (12%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L + I+KL N +G+S L+++K ++ I Y ++N+ E ++ F
Sbjct: 75 LTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYR 134
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ E SV +N +L AL +K + ++ K+ G++P++ TYN ++KA C++
Sbjct: 135 IREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNM-KSEGLEPNVFTYNVLLKALCQNG 193
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L EM K P +DV+ Y
Sbjct: 194 KVDGACKLLVEMSNKGCDP------------------DDVS-----------------YT 218
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I S+CKL +A+ L + +P Y+ I+G CK+ F+EA M +
Sbjct: 219 TVISSMCKLGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDR 273
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ PN Y T++ + G+ E +L +G PN T SL+ G +V +A
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 376 KELIGL-VKEKFTKNVDTWNEIEAGL 400
L L ++E + NV +N + GL
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGL 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ YN +I C + A S+ +M++ SI+PN +++ ++ GF K
Sbjct: 344 GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSA 403
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G + V +Y + LC++ +A L+D M+S G P +T+++FI G
Sbjct: 404 CETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKG 463
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
C+ G E A M PN Y ++ + + + A G +E
Sbjct: 464 LCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRE 514
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 12/280 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTY 184
+ A EM + + +V +++ ++ L+ D V+ F + + G +P++ T+
Sbjct: 261 KEAFDLMNEMVDRGVDPNVISYSTVISCLS---DMGNVELSLAVFGRMFVRGCRPNVQTF 317
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+IK F A + M R+ + PN ++ L+ G + ++ V ME+
Sbjct: 318 TSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK 377
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
++ V+ Y+ I+ K A ++M++ G +PN V Y+ + C+ F++
Sbjct: 378 DSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQ 437
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M + G P + + +C+ G E A+ + +PN T L+
Sbjct: 438 AFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLD 497
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVD----TWNEIEAGL 400
GL A+ EA GL++E + V+ T+N I G
Sbjct: 498 GLFRANAFREA---CGLIRELEERKVEFDCVTYNTIMYGF 534
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 125/292 (42%), Gaps = 7/292 (2%)
Query: 114 AHSIILYG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
A++ +++G NM E A+ + +M++ +R +V ++ ++ + D + +
Sbjct: 351 AYNTLIHGLCSDGNMDE-AISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G +P++ Y ++ C+ S A+ ++ M P +F + G +
Sbjct: 410 MINC-GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAG 468
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ E VL ME+Y + YN + L + EA L+ E+ + ++ + VTY+
Sbjct: 469 RVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYN 528
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-SIA 349
+YGF +G ++ + M +G+ ++ T V CK G +TA+ S
Sbjct: 529 TIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAE 588
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
K + + T ++ G+ EA L ++K N+ TWN + G
Sbjct: 589 KEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 5/308 (1%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEH 128
+H L FS+ +N +++ YF+ Q L + +LQ FH+ + + N+T
Sbjct: 151 THQSNLVFSVLMNAYTDSGYFSDAIQCFR-LVRKHNLQIP-FHSCGYLFDRLMKLNLTSP 208
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A ++E+ + V FN L+ L E + +F E K G++P + ++N +I
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLI 267
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+S + + + M + P+ ++ L+ G KE + +D NK+ M G+
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV 327
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ I+ C + + +ML KG+KP+ +TY+ I G CK G+ EAKK
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL 387
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M+ GL P+ Y ++ CK GD E+AL KE + +G + +L++G
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447
Query: 369 ASKVSEAK 376
+V EA+
Sbjct: 448 EGQVIEAE 455
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KPD+ TYN +I C+ D A ++ EM ++ +KP+ ++ L+ G KE E
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M + G++ + I C+ + EA+ L EML G+KP+ TY+ I+G
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK G+ + K + M G P Y ++ +CK G + A + G VP+
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539
Query: 356 FTTMKSLV 363
T L+
Sbjct: 540 DITYNILL 547
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 130/257 (50%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A ++E+ ++ +V N ++ AL + + K F+ + G+ PD+ TYN +I
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFPDVVTYNTLI 400
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A+C A+ ++ M K +KP ++ A++ G K KY VL M + GM
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN+ + C+ +A+ + DEM S+G+ P+ V++S I K+G ++A K+
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R M N+GL+P++ +Y ++ C+ G AL E + +G + T +++ GL
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580
Query: 369 ASKVSEAKELIGLVKEK 385
+SEA EL + E+
Sbjct: 581 EKMLSEADELFTEMTER 597
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 140/359 (38%), Gaps = 37/359 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+I IN L + +L +++ + + + I Y + + E A M
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
L+ V +NA++ L Y K V E K G+ PD TYN ++ C + +
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI-GMSPDTATYNILLVECCRNDN 478
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVA-------------------------------- 224
A I EM + + P+ SF AL+
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538
Query: 225 ---GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
GF + + KV M G V YN ++ LCK + +EA L EM +G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P+ T++ I G+ KDGN +A + +M L P+ Y T++ CKG + E
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ I++ PN + L+ G VSEA L +V++ F + T N I G
Sbjct: 659 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 8/329 (2%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
+ E+I + + + P D ++FS I LS+ + +Y ++K + +
Sbjct: 481 DAERIFDEMPSQGVVP----DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 536
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + + + A++ EM E V +N +L L K E +F E +
Sbjct: 537 TILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTE 596
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ PD T+ +I + + + + A ++ M ++++KP+ ++ L+ GF K + E
Sbjct: 597 R-GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 655
Query: 234 DVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
VN++ M+ R + +S Y + I+ C + +EA L DEM+ KG + +T +
Sbjct: 656 KVNELWNDMISRRIYPNHIS-YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G+C+ GN +A +F M G+ P+ Y T++ K + + A + G
Sbjct: 715 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 774
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+P+ T ++ G + ++ EA ELI L
Sbjct: 775 LPDVITYNVILNGFSRQGRMQEA-ELIML 802
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ TYN ++ C+ S A + EM + + P+ +F L+ G+ K+
Sbjct: 563 GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKA 622
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +MM + +K V YN I CK + + L ++M+S+ + PN ++Y I G
Sbjct: 623 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C G EA + + M G T+V C+ G+ A F + KG VP+
Sbjct: 683 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 742
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T +L+ G + A L+ GL+ + T NV
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
F+ L+ A+ +E F K+ G+ ++ N ++ + A+ I E
Sbjct: 290 VFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ R ++ N + ++ K +K E+ L ME G+ V YN I++ C+
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L+D M KG+KP TY+ I G CK G + AK M G+SP+++ Y
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ C+ + A E ++G VP+ + +L+ L+ + +A
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 517
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIIL 119
R L LD + ++ +N L + + + E+ R PD F+ + ++
Sbjct: 556 RDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD-----FYTFTTLI 610
Query: 120 YG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE------ 170
G NM + AV F+ M + L+ V +N L+ + ++V ++ +
Sbjct: 611 NGYXKDGNMNK-AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669
Query: 171 FPK--TYGI--------------------------KPDLDTYNRVIKAFCESSDSSSAYS 202
+P +YGI + + T N ++K +C + ++ A
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 729
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
L+ M K I P+ ++ L+ GF KEE + ++ ME G+ V YNV ++
Sbjct: 730 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 789
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ + EA+ ++ +M+ +G+ P+ TY+ I G N +EA + + M G P+
Sbjct: 790 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK----------------PDLDTYN 185
+HS+ +F+A++ L ++ + + V + + G+ + ++
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 292
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ + ++ + K + + ++ +L+ G K + ++ Q + R
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V N+ I++LCK +K K+ L +M KG+ P+ VTY+ I +C+ G EEA
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ MS GL P Y ++ +CK G Y A G E + G P+ T L+
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 366 LAGASKVSEAKEL 378
+ +A+ +
Sbjct: 473 CCRNDNMMDAERI 485
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 18/235 (7%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-----------------IKPNASSFG 220
K L +++ +I S A +++ M RKS N F
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 292
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
LV + + K + + ++++ G+ ++ N + L K+ A + E++
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++ N T + I CK+ E K F M G+ P+ Y T++ C+ G E A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
KG P T +++ GL K AK ++ ++K + + T+N
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ + D + + P ++G KP YN V+K C + A ++ EM
Sbjct: 240 YNVLMDGMCGEGDVDDALELLRNLP-SHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 298
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
R++ PN ++F ++ ++ + ++L+ M ++G + + YN I+ LC+ R
Sbjct: 299 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 358
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A LL +M S G KP+ VTY+ + G C + +A++ M+ +G P++ + T+
Sbjct: 359 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL 418
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ F+C+ G A+ K+ KG PN T ++++GLA A+K+ +A EL
Sbjct: 419 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
++++Y + + + A++ ++M +H ++ +NA++ L ++ + + K
Sbjct: 311 NVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-K 369
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+YG KPD+ TYN ++K C ++ A ++ M + P+ +F L+ ++
Sbjct: 370 SYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMV 429
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
D +V + M G Y+ I L K K +A L +EM KG P+ + Y
Sbjct: 430 DAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 488
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
D EEA + R + +SG+SP++ +Y ++ +C+ G E A+ ++ G +
Sbjct: 489 ECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCM 548
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T L+ GLA ++EA+EL+
Sbjct: 549 PDDLTYVILIEGLAYEGYLNEARELL 574
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 166/374 (44%), Gaps = 25/374 (6%)
Query: 29 SSGDKTPLTSKDKTRAALTLLKSESNPEKIL-EICRAAALTPESHLDR-LAFSIAINKLS 86
SSG K P T + ++ T + + P ++L R +AL LD L + +
Sbjct: 45 SSGAKPPPTPRLESP---TTRQQQQAPRRLLGSDRRLSALVHRGDLDAALRLVESSPRPP 101
Query: 87 EANYFNGISQYLEELKTRPDLQNERF-----HAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+A N + + L + RPD ER A +++ YG +T+ R + D ++
Sbjct: 102 DAALANRLVRDLCR-RGRPD-DAERVVGACGPAATVVAYGA--LTDGYCRAGRLGDARRV 157
Query: 142 ------RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ + +N L+ L ++ V + G PD+ TYN +++A C+
Sbjct: 158 VGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDM-LCRGCAPDVVTYNILLEATCKGR 216
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ M + PN ++ L+ G E +D ++L+ + +G K YN
Sbjct: 217 GYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 276
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LC + +A L+ EML + PN T++ IY C+ G ++A + MS
Sbjct: 277 TVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 336
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + N Y ++ +C+ + + A+G + + G P+ T +L+ GL A++ +A
Sbjct: 337 GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDA 396
Query: 376 KELIGLVKEKFTKN 389
+EL+ + T+N
Sbjct: 397 EELM----DNMTQN 406
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ + + H + S +N +L L A+ + + + E + P+ T+N
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE-NCPPNEATFN 311
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI + C A +L +M + N ++ A++ G ++ + +L M+ Y
Sbjct: 312 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + YN + LC + +A+ L+D M G P++VT++ I C+ G +A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ ++ M + G +PNS Y T++ + K + AL E KG+ P+
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 41/268 (15%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG---QANMTEHAVRTFK 134
F++ I L Q LE++ N ++ I+ G Q N+ + A+
Sbjct: 310 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN--IVTYNAIINGLCEQRNV-DGAMGLLS 366
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+M + + + +N LL L A + + + + + G PD T+N +I C+
Sbjct: 367 KMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN-GCLPDNVTFNTLIGFLCQK 425
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV--------------NKVLQ 240
A + +M K PN+ ++ +++G K K + +K+ Q
Sbjct: 426 GLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQ 485
Query: 241 MME----------------RYGMKSGVS----MYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ R SG+S +YN + LC+ K A ++ M+S
Sbjct: 486 LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS 545
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
G P+ +TY I G +G EA++
Sbjct: 546 GCMPDDLTYVILIEGLAYEGYLNEAREL 573
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 29/360 (8%)
Query: 22 LATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIA 81
L T SIL G L + K + A+ L K E+C + P S A S
Sbjct: 361 LVTYSILIHG----LCKQGKVQQAIQLYK---------EMC-FNRIFPNS----FAHSGI 402
Query: 82 INKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEM 136
+ L E + Y + L RPD+ ++I++ G + E AVR +K +
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVT-----LYNIMIDGYVKLGDVEEAVRLYKRL 457
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + S+ FN+L+ + E +R+ +E K +G++P TY ++ A+CE +
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRL-LESIKLHGLEPSAVTYTTLMNAYCEEGN 516
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ + +L EM+ K I+P ++ ++ G K+ K E+ ++L+ M G+ YN
Sbjct: 517 INKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNT 576
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I CK + +A LLD+ML ++P TY+ I G C+ G+ E+A + + +
Sbjct: 577 IIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN 636
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
++ Y TM+ C GD + A+ + + KG+ + +++ L ++EAK
Sbjct: 637 INLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAK 696
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 156/337 (46%), Gaps = 12/337 (3%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNE 110
N E+ L + R L+ L+ + +S+ ++ L + + Q L E++ +PDL
Sbjct: 306 NIEEALRL-RRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV-- 362
Query: 111 RFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+SI+++G + + A++ +KEM +++ + A + +L L K R++
Sbjct: 363 ---TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLC-EKGMLSDARMY 418
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ ++PD+ YN +I + + D A + + K+I P+ +F +L+ GF K
Sbjct: 419 FDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K + ++L+ ++ +G++ Y +++ C+ + LL EM K ++P VT
Sbjct: 479 NRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVT 538
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I G CK EE+ + M GL+P+ Y T++ CK D A + +
Sbjct: 539 YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
P T L+ GL V +A ++ ++++
Sbjct: 599 IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD + H +I+ G E A+ +M++ L+ + + + +
Sbjct: 218 PDTYSYNILIHGLIVAGS---MEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ + + G+KPDL TY +I C+ + A + ++ + N + L++
Sbjct: 275 REIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
K + ++ ++L ME ++ + Y++ IH LCK K +A L EM + P
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
NS +S + G C+ G +A+ ++ + S L P+ ++Y M+ K GD E A+
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLY 454
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
K K P+ T SL+ G KV EA+ L+ +K
Sbjct: 455 KRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIK 493
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 3/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A F M ++ + ++N L+ L +A +E + + K G++P
Sbjct: 195 YCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQ-GLQP 253
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D+ TY V K F S A I+ +M + +KP+ ++ L+ G + E+ ++
Sbjct: 254 DMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRL 313
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + G + V +Y+V + SLCK + EA LL EM + ++P+ VTYS I+G CK
Sbjct: 314 RRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCK 373
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G ++A + Y+ M + + PNS + ++ +C+ G A + I P+ T
Sbjct: 374 QGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTL 433
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
++ G V EA L +++K T ++ T+N + G
Sbjct: 434 YNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYG 475
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 113/292 (38%), Gaps = 40/292 (13%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ M A+ +M E LR S+ +N+LL L + ++ K G
Sbjct: 96 SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLR----HTDIMWDVYNDIKDSGTPQSAR 151
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T + ++ C S A L + D K P+ SF +++ + K + MM
Sbjct: 152 TSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMM 211
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS---------------- 286
+YG+ YN+ IH L EA L ++M +G++P+
Sbjct: 212 LKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLM 271
Query: 287 --------------------VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
VTY+ I G C+ GN EEA + R + +SG N +Y
Sbjct: 272 SGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSV 331
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++ +CK G + AL E A P+ T L+ GL KV +A +L
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ + +V + ++ L + +E ++ +E + G+ PD TYN +I+ FC++
Sbjct: 526 EMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQL-LEDMRAKGLAPDQITYNTIIQCFCKA 584
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D A+ +L +M +++P +++ L+ G + ED ++VL ++ + Y
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
I + C A + +M+ KG + + YS I CK EAK ++ IM +
Sbjct: 645 TTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLS 704
Query: 315 SGLSPNSSVYFTMV 328
G+SP+ ++ M+
Sbjct: 705 DGVSPDQEIFEMML 718
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++LE + L P + + ++ +N E N + + L E+ + D++ ++
Sbjct: 487 RLLESIKLHGLEPSA----VTYTTLMNAYCEEGNINKLHELLLEMNLK-DIEPTVV-TYT 540
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
+++ G + E +V+ ++M L +N ++ AKD ++ + +
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML-I 599
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+ ++P TYN +I C D A +L + ++I ++ ++ + +
Sbjct: 600 HNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQR 659
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
KV M G + + Y+ I+ LCK EAK MLS G+ P+ + +
Sbjct: 660 AVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLN 719
Query: 295 GFCKDGNFEEAKKFYRIMSNSGL 317
F + G+ + +M GL
Sbjct: 720 AFHRAGHVHSVFELLAVMIKFGL 742
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 129/287 (44%), Gaps = 22/287 (7%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALL----------LALTIAKDYKEVKRVFIEFPK 173
M E A + F +M++ ++ V + N LL LAL+ KD
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV----------- 243
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ P + TYN VI D +A S+ EM K ++P+ ++ +L+ G+ K
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
V + M+ G + V YN I+ CK + +A L M +G++PN VTYS I
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
FCK G EA KF+ M GL PN Y +++ CK GD A E G
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
N T +L+ GL ++ EA+EL G L+K +T N + + G
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ FK+M L SV +N ++ L D + + +F E K G++PD+ TYN +I
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM-KAKGLRPDIVTYNSLI 293
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + + A S+ EM +P+ ++ +L+ F K E+ + L M++ G++
Sbjct: 294 DGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I + CK EA +M+ G++PN TY+ I CK G+ EA K
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M +G++ N Y ++ +C+ G A + GW N SL G
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Query: 369 ASKVSEAKELI 379
A + +A +++
Sbjct: 474 AKMMEKAMDIL 484
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F+EM LR + +N+L+ VF E K G +PD+ TYN
Sbjct: 268 EAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM-KDAGCEPDVITYNS 326
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ A+ L M ++ ++PN ++ L+ F K + NK M R G
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ Y I + CK+ EA L EM G+ N VTY+ + G C+DG EA+
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + +G + N +Y ++ + K E A+ +E K P+ + + GL
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506
Query: 367 AGASKVSEAKELI 379
+++ ++ +I
Sbjct: 507 CRQNEIEDSMAVI 519
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPDL Y I C ++ + +++ EM + N+ + L+ ++K K +
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+LQ M+ G+K V Y V I LCK+ +A D M G++PN + Y+ I G
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+ EEAK + M + G+SP+ VY +++ K G+ AL + G +
Sbjct: 612 CKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDL 671
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
SL+ G + +V AK L+
Sbjct: 672 CAYTSLIWGFSRYGQVQLAKSLL 694
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 132/294 (44%), Gaps = 9/294 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM----TEHAVR 131
+ +S I+ +A +++ ++ R LQ F S+I AN A +
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDM-IRVGLQPNEFTYTSLI---DANCKIGDLNEAFK 412
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM + + ++ + ALL L +E + +F K G + Y + +
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKA-GWTLNQQIYTSLFHGY 471
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
++ A IL EM++K++KP+ +G + G ++ + ED V++ M G+ +
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS 531
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+Y I + K+ K EA LL EM G+K VTY I G CK G ++A +++
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDH 591
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M+ +GL PN +Y ++ +CK E A E + KG P+ SL+ G
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDG 645
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 15/321 (4%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILY 120
A L+P +++ I L+ EE+K RPD+ + I Y
Sbjct: 244 VAGLSPSV----FTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVT---YNSLIDGY 296
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIK 178
G+ M AV F+EM + V +N+L+ ++ + + F + K G++
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFC---KFERIPQAFEYLHGMKQRGLQ 353
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TY+ +I AFC++ A +M R ++PN ++ +L+ K + K+
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M++ G+ + Y + LC+ + EA+ L +L G N Y+ +G+ K
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
E+A M+ L P+ +Y T ++ +C+ + E ++ +E + G N
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYI 533
Query: 359 MKSLVTGLAGASKVSEAKELI 379
+L+ K +EA L+
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLL 554
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 11/321 (3%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHA 114
+ E +A L P D + ++ I+ + G EE+K PD+ +
Sbjct: 273 LFEEMKAKGLRP----DIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVIT---YN 325
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I + + A M + L+ +V ++ L+ A A E + F++ +
Sbjct: 326 SLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV 385
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++P+ TY +I A C+ D + A+ + +EM + + N ++ AL+ G ++ + +
Sbjct: 386 -GLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMRE 444
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + + G +Y H K + +A +L+EM K +KP+ + Y I+
Sbjct: 445 AEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIW 504
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C+ E++ R M + GL+ NS +Y T++ K G A+ +E G
Sbjct: 505 GLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKI 564
Query: 355 NFTTMKSLVTGLAGASKVSEA 375
T L+ GL V +A
Sbjct: 565 TVVTYGVLIDGLCKIGLVQQA 585
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 1/236 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A M E A+ +EM++ L+ + + + L + ++ V E G+
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDC-GLTA 529
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ Y +I A+ + ++ A ++L EM IK ++G L+ G K + +
Sbjct: 530 NSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYF 589
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M R G++ + +Y I LCK EAK L +EML KG+ P+ + Y+ I G K
Sbjct: 590 DHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKH 649
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
GN EA M G+ + Y ++++ + G + A E + KG +P+
Sbjct: 650 GNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPD 705
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 1/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN + +YL +K R N ++ I + +A M A + F
Sbjct: 320 DVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFF 379
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M L+ + + +L+ A D E ++ E + G+ ++ TY ++ CE
Sbjct: 380 VDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA-GVNLNIVTYTALLDGLCE 438
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A + + + N + +L G+ K + E +L+ M + +K + +
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y +I LC+ + ++ A++ EM+ G+ NS Y+ I + K G EA + M
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ Y ++ +CK G + A+ + G PN +L+ GL +
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618
Query: 374 EAKELIGLVKEK 385
EAK L + +K
Sbjct: 619 EAKNLFNEMLDK 630
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 1/189 (0%)
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
R +P F L E+ + M ++ + V N +H L K K
Sbjct: 174 RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGG 233
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A + +M+ G+ P+ TY+ I ++G+ E A+ + M GL P+ Y +++
Sbjct: 234 LALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLI 293
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFT 387
K G A+ +E G P+ T SL+ ++ +A E L G+ +
Sbjct: 294 DGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353
Query: 388 KNVDTWNEI 396
NV T++ +
Sbjct: 354 PNVVTYSTL 362
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 155/334 (46%), Gaps = 9/334 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK----TRPDLQNERFHAHSIILYGQANMTE 127
HLD++++ IN L ++ Q L +++ RPD+ + I + + +
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDV---IMYTAIIDSFCKDKLVI 211
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + EM K+ +V FN+L+ I KE + E + P++ T+N +
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLN-NVNPNVYTFNIL 270
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C+ + A S+L+ M ++ ++PN ++ +L+ G++ ++ V + G+
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V Y+V I+ LCK + EA L EM K M PN+VTYS I G CK G +
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
++N G N Y +++ +CK + A+ + +G P+ +T +LV GL
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++ +A+ + L+ + + N+ + + GL
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGL 484
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 15/335 (4%)
Query: 74 DRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA----NMT 126
+ F+I IN L + N+ + + +L +PD + L G+ N
Sbjct: 87 EMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFH 146
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+H +R +D+ ++ L+ L + + + ++ + ++PD+ Y
Sbjct: 147 DHVIRKRFHLDQ-------VSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTA 199
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +FC+ AY + +EM K I PN +F +L+ GF + ++ +L M
Sbjct: 200 IIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +N+ I LCK + +A ++L M+ +G++PN VTY+ + G+ +AK
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +S G++PN Y M+ +CK + A+ KE K PN T SL+ GL
Sbjct: 320 HVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGL 379
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ ++S+ +LI + + N+ T+N + GL
Sbjct: 380 CKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A M + + +V + +L+ + K+ + K VF G+ P++ +Y+ +I
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI-SLRGVTPNVHSYSVMI 341
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A + EM K++ PN ++ +L+ G K + DV ++ + G
Sbjct: 342 NGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQP 401
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + YN ++ LCK + +A ALL +M +G++P+ TY+ + G CK+G ++A++
Sbjct: 402 ANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRI 461
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
Y+ + G N +Y M+ +CK G ++ AL + G +P+ T ++L++ L
Sbjct: 462 YQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFK 521
Query: 369 ASKVSEAKELI 379
+K +A +L+
Sbjct: 522 NNKNGKAVKLL 532
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 43/333 (12%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHS--VGAFNALLLALTIAKDYKEV 164
L N R H + + + + AV +F + H H+ + FN +L +L +K +
Sbjct: 16 LLNRRLHIQPLPSF--IDNLDDAVSSFNHI-LHMNNHTPPIFEFNKILSSLVKMNHFK-I 71
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA-------- 216
F + + GI+P++ T+N +I F + A+S++A++ + +P+
Sbjct: 72 AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131
Query: 217 ---------------------------SSFGALVAGFYKEEKYEDVNKVLQMMERYGM-K 248
S+G L+ G K + ++L+ +E + +
Sbjct: 132 GLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVR 191
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V MY I S CK + +A L EM+ K + PN VT++ IYGFC G +EA
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
MS + ++PN + ++ +CK G+ + A I +G PN T SL+ G
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+V++AK + + + T NV +++ + GL
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGL 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L + N +H F + + +V +++ ++ L K E ++F E +
Sbjct: 311 LVKEVNKAKHV---FNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM-HLKNMT 366
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TY+ +I C+S S + ++ E++ + N ++ +L+ G K + + +
Sbjct: 367 PNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIAL 426
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M+ G++ +S Y + LCK + +A+ + ++L KG N Y+ I G CK
Sbjct: 427 LTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCK 486
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+G F+EA M ++G P++ Y T++ + K A+ +E IA+
Sbjct: 487 EGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 47/356 (13%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNG----ISQYLEELKTRPDLQNERFHAHSII 118
R A P + + ++ + A +G +S EE +P+L + +
Sbjct: 179 RGAGCAPNA----VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
+A E A + F EM L V ++N LL E VF E + G+
Sbjct: 235 ---KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV 290
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ T+ +I A C++ + A +++A+M + ++ N +F AL+ GF K+ +D
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM--------------------- 277
++ M + G++ V YN I+ CKL + A+ L+ EM
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 278 --------------LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
L KG+ P+++TYS I G C++ +A + + M G+ P+
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T++ CK G+ E AL E I KG +P+ T L+ GL+ +++ EA L+
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ +A + +++ R NE I + + + A+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + ++ SV +NAL+ ++ R I + +KPD+ TY+ +I +C+
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYC-KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ SA+ + +M +K + P+A ++ +L+ G +E++ D ++ + M + G++
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI-------------------- 293
Y I CK +A +L DEM+ KG+ P+ VTYS I
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530
Query: 294 ------------------------------YGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
GFC G +EA K Y+ M + + SV
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C+GG+ AL F K+ + G+ PN T+ SLV GL V EA I
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AV +M + +N L+ A A + +RV + KP+L T+N
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C++ A + EM R+ + P+ S+ L++G+ K + V M + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + IH+ CK +A AL+ +M +G++ N VT++ I GFCK G ++A
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M G+ P+ Y ++ CK G + A +E AK P+ T ++++G
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 367 AGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+ A +L ++K+ + T++ + GL
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 4/294 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ L+++ TR N + I + N E A + + + V FN+L+ L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ ++++ +F E ++ G +PD TYN +I + C A ++L +M+ +
Sbjct: 411 CLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ GF K K + ++ ME +G+ YN I LCK R+ +A L+D
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+M+ +G KP+ TY+ + FC+ G+ ++A + M+++G P+ Y T++ +CK G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
E A + KG ++ GL K +EA I L +E +N
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA---INLFREMLEQN 640
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE--H 128
D+ F+ +N L +A + + ++ + PD+ + ++ ++ G + E
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV-----YTYNSVISGLCKLGEVKE 348
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
AV +M + +N L+ L ++ E+ RV + GI PD+ T+N
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILPDVCTFN 404
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C + + A + EM K +P+ ++ L+ + K ++ +L+ ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I CK K EA+ + DEM G+ NSVTY+ I G CK E+A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M G P+ Y +++ C+GGD + A + + G P+ T +L++G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 366 LAGASKVSEAKELIGLVKEK 385
L A +V A +L+ ++ K
Sbjct: 585 LCKAGRVEVASKLLRSIQMK 604
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 149/353 (42%), Gaps = 1/353 (0%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
L + N K++EI A D F++ I L A+ LE++ + +
Sbjct: 163 LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP 222
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+E+ + Y + + A+R ++M E S + N ++ ++
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E G PD T+N ++ C++ A I+ M ++ P+ ++ ++++G K
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ ++ +VL M YN I +LCK + EA L + SKG+ P+ T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G C N A + + M + G P+ Y ++ +C G + AL K+
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
G + T +L+ G A+K EA+E+ ++ ++N T+N + GL
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 137/335 (40%), Gaps = 38/335 (11%)
Query: 104 RPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+P+ E I+L G++ + + ++M + F L+ + +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNR-----------------------------------V 187
E+ V +G+KPD YNR +
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IKA C + A +L +M + P+ +F ++ G+ +E + ++ + M +G
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAK 306
NV +H CK + +A + EM ++ G P+ T++ + G CK G+ + A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +M G P+ Y +++ +CK G+ + A+ + I + PN T +L++ L
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 367 AGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++V EA EL ++ K +V T+N + GL
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 108/289 (37%), Gaps = 74/289 (25%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+++ + D S+A + +K + P + + ++ + ++D+ K+L+ M+
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK------------------------ 280
+ G S + + I S + E +++D M+ +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 281 ------------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G+KP+ T++ I C+ A M + GL P+ + T++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 329 YFMCKGGDYETAL-----------------------GFCKE-------------SIAKGW 352
+ GD + AL GFCKE S G+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
P+ T +LV GL A V A E++ +++E + +V T+N + +GL
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A M + + S+ NALL L A + +V EF GI P
Sbjct: 184 YKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVR-EFMVGAGISP 242
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ +I+A+C+ + +A +L EM + N ++ L+AG + E+
Sbjct: 243 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 302
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME YG+ Y I+ LCK R+ EAKALLDEM +KPN V Y++ I GF ++
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 362
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN +EA K + M +G+ PN Y +V +CK G + A K+ + P+ T
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 422
Query: 360 KSLVTG-LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
++ G SK + L + + NV T++ + GL Q
Sbjct: 423 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 134/282 (47%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A + EM E + +N L+ L + +E F + + YG+ P
Sbjct: 254 YCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVP 312
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY +I C+S S+ A ++L EM +KPN + L+ GF +E ++ K++
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 372
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G++ Y+ + LCK+ + A LL +M+ +P+++TY+ I G +
Sbjct: 373 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 432
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ ++A + M N+G+SPN Y M++ +C+ G+ E A +E KG PN
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L++G VS A E+ + K ++ +N + GL
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 109/204 (53%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P+ TY+ +++ C+ A +L +M R S +P+ ++ ++ G ++ +D
Sbjct: 379 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDA 438
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L ME G+ V Y++ IH LC+ + +A LL+EM +KG+KPN+ Y+ I G
Sbjct: 439 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 498
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++GN A + + M+ + P+ Y ++++ + K G E + + + +G +PN
Sbjct: 499 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 558
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G + A++L+
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLV 582
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 159/373 (42%), Gaps = 46/373 (12%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A ++P + +SI I+ L ++ S LEE+ T+ N +A I Y +
Sbjct: 448 AGISPNVY----TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 503
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
A F +M + + + +N+L+ L+ +E + F + + G+ P+ TY
Sbjct: 504 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM-QERGLLPNEFTY 562
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN-------- 236
+ +I + ++ D SA ++ M +KPN + L+ ++K + E V+
Sbjct: 563 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 622
Query: 237 ---------------------------KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+VL +E+ G V +Y+ I LCK +
Sbjct: 623 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 682
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A +LDEM KG+ PN V Y+ I G CK G+ A+ + + GL PN Y +++
Sbjct: 683 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLID 742
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK- 388
CK GD A E +A G P+ L TG + A + +A + L++E F +
Sbjct: 743 GSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA---MFLIEEMFLRG 799
Query: 389 --NVDTWNEIEAG 399
++ ++N + G
Sbjct: 800 HASISSFNNLVDG 812
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 12/348 (3%)
Query: 39 KDKTRA-ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY 97
KD RA A+ LL K+ E A ++P D +S I + F+ +
Sbjct: 217 KDLLRADAMALL------WKVREFMVGAGISP----DVYTYSTLIEAYCKVREFDTAKKV 266
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L E++ R N + I ++ E A K+M+++ L + AL+ L
Sbjct: 267 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 326
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
++ E K + E +KP++ Y +I F ++ A+ ++ EM ++PN
Sbjct: 327 SRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKI 385
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ LV G K + + + +L+ M R + YN+ I + +A LL EM
Sbjct: 386 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 445
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G+ PN TYS I+G C+ G E+A M+ GL PN+ VY ++ C+ G+
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
A + +P+ SL+ GL+ +V E+ + ++E+
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 553
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
K+ R+ E + GI P++ TY+ +I C+S + A +L EM K +KPNA +
Sbjct: 436 KDAFRLLSEM-ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 494
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L++G+ +E ++ M + + + YN I L K+ + E+ +M +G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ PN TYS I+G+ K+G+ E A++ + M ++GL PN +Y ++ K D E
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
K + +G + + L+ L+ + + A + L G+ K +V ++ + +GL
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +++ E TFK M + + + L+ L+ + + + RV K G P
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN-GSVP 662
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ Y+ +I C+++D A+ IL EM +K + PN + AL+ G K V
Sbjct: 663 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 722
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ Y I CK+ + A L +EML+ G+ P++ YS G
Sbjct: 723 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A M G + SS + +V CK G + L + +G VPN T+
Sbjct: 783 GDLEQAMFLIEEMFLRGHASISS-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 841
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++++GL+ A K+SE + +++K +++
Sbjct: 842 ENIISGLSEAGKLSEVHTIFVELQQKTSES 871
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R EM+ + +V ++ ++ L + + ++ + E T G+KP+ Y +I
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLI 496
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + S A I +M + ++ P+ + +L+ G K + E+ K M+ G+
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y+ IH K A+ L+ ML G+KPN V Y + + K + E+
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M + G+ ++ +Y +++ + G+ E A G VP+ SL++GL
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC- 675
Query: 369 ASKVSEAKELIGLVKEKFTKNVD----TWNEIEAGL 400
K ++ ++ G++ E K VD +N + GL
Sbjct: 676 --KTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 43/255 (16%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+DTY + S A ++ M + + P+ AL+ + + + KV +
Sbjct: 181 VDTYKK-------SGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVRE 233
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G+ V Y+ I + CK+R+ AK +L EM +G N+VTY+ I G C+ G
Sbjct: 234 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 293
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG-------------------------- 334
EEA F + M + GL P+ Y ++ +CK
Sbjct: 294 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 353
Query: 335 ---------GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKE 384
G+ + A KE +A G PN T +LV GL ++ A L+ +V++
Sbjct: 354 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 413
Query: 385 KFTKNVDTWNEIEAG 399
+ T+N I G
Sbjct: 414 SHRPDTITYNLIIEG 428
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 135/331 (40%), Gaps = 32/331 (9%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMT--E 127
LD + I I+ LS + + L ++ + PD+ H +S ++ G E
Sbjct: 627 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV-----HVYSSLISGLCKTADRE 681
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A EM + + ++ +NAL+ L + D + VF G+ P+ TY +
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI-LAKGLVPNCVTYTSL 740
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C+ D S+A+ + EM I P+A + L G E +++ M G
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 800
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE--- 304
S +S +N + CK K E LL ++ +G+ PN++T + I G + G E
Sbjct: 801 AS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 859
Query: 305 -------------AKKFYRI---MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
A+ F + M N G P V M+ CK G+ + AL +
Sbjct: 860 IFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIV 918
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
AK ++ ++V L K+SEA L+
Sbjct: 919 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 949
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 47/356 (13%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNG----ISQYLEELKTRPDLQNERFHAHSII 118
R A P + + ++ + A +G +S EE +P+L + +
Sbjct: 37 RGAGCAPNA----VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 92
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
+A E A + F EM L V ++N LL E VF E + G+
Sbjct: 93 ---KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV 148
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ T+ +I A C++ + A +++A+M + ++ N +F AL+ GF K+ +D
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM--------------------- 277
++ M + G++ V YN I+ CKL + A+ L+ EM
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 268
Query: 278 --------------LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
L KG+ P+++TYS I G C++ +A + + M G+ P+
Sbjct: 269 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 328
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T++ CK G+ E AL E I KG +P+ T L+ GL+ +++ EA L+
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 384
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ +A + +++ R NE I + + + A+
Sbjct: 150 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 209
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + ++ SV +NAL+ ++ R I + +KPD+ TY+ +I +C+
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYC-KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 268
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ SA+ + +M +K + P+A ++ +L+ G +E++ D ++ + M + G++
Sbjct: 269 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 328
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI-------------------- 293
Y I CK +A +L DEM+ KG+ P+ VTYS I
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 388
Query: 294 ------------------------------YGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
GFC G +EA K Y+ M + + SV
Sbjct: 389 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 448
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C+GG+ AL F K+ + G+ PN T+ SLV GL V EA I
Sbjct: 449 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G+ P++ TYN +++A C A ++ +M PNA ++ LVA F + + +
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 235 VNKVLQMMERYG-MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+V+ +M G K + +N ++ LCK + A+ + DEM+ +G+ P+ V+Y+ +
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+CK G E+ + M+ GL P+ + ++++ CK G+ E A+ + +G
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183
Query: 354 PNFTTMKSLVTGLA 367
N T +L+ G
Sbjct: 184 MNEVTFTALIDGFC 197
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 1/277 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AV +M + +N L+ A A + +RV + KP+L T+N
Sbjct: 27 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 86
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C++ A + EM R+ + P+ S+ L++G+ K + V M + G
Sbjct: 87 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + IH+ CK +A AL+ +M +G++ N VT++ I GFCK G ++A
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M G+ P+ Y ++ CK G + A +E AK P+ T ++++G
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 367 AGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGLPQ 402
+ A +L ++K+ + T++ + GL +
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R + PN ++ LV + E+ V+ M G YN + + C+ +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 267 CAEAKALLDEMLSKG-MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
A+ ++ M +G KPN VT++ + G CK G E A+K + M GL+P+ Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T++ CK G +L E +G VP+ T SL+ A + +A L+ ++E+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G++PN Y +V +C G E A+G + G PN T +LV A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 372 VSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
+ A+ ++ L++E+ N+ T+N + GL
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGL 91
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 5/315 (1%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
L P H +S+ +N + Q E +K + N + I Y M
Sbjct: 223 GLVPNPH----TYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGM 278
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A + F EM E + V +N L+ L K + E ++ + K G+ P++ TYN
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV-GLSPNIVTYN 337
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ +A + ++ + P ++ L+AG+ K E +++ ME
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ Y + I + +L +A + M G+ P+ TYS I+G C GN +EA
Sbjct: 398 CIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEA 457
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K ++ + L PNS +Y TM++ CK G AL E + G VPN + S +
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGL 517
Query: 366 LAGASKVSEAKELIG 380
L K EA+ L+G
Sbjct: 518 LCRDEKWKEAELLLG 532
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 7/319 (2%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLR 142
L +NYF+ ELK++ L F I++ G +A R ++E L
Sbjct: 134 LIRSNYFDKAWWIFNELKSKVVLDAYSF---GIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V + L+ + K +F + + G+ P+ TY+ ++ F + +
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRL-GLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ M R I PNA ++ L++ + + KV M G+ GV YN+ I LC
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +K EA L+ ++ G+ PN VTY+ I GFC G + A + + + +SGLSP
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y T++ K + AL KE + P+ T L+ A + +A E+ L+
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLM 429
Query: 383 -KEKFTKNVDTWNEIEAGL 400
K +V T++ + GL
Sbjct: 430 EKSGLVPDVYTYSVLIHGL 448
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+++ L+P + ++ I S+ G ++E++ R ++ + I + +
Sbjct: 360 KSSGLSP----TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFAR 415
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N TE A M++ L V ++ L+ L + + KE ++F + + ++P+
Sbjct: 416 LNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH-LQPNSV 474
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
YN +I +C+ S A +L EM + PN +SF + + ++EK+++ +L M
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534
Query: 243 ERYGMKSGVSMY 254
G+K VS+Y
Sbjct: 535 INSGLKPSVSLY 546
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 152/332 (45%), Gaps = 6/332 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHA 129
HL+ + + I IN L + Q L +++ + L N +S I+ G + + A
Sbjct: 155 HLNHVTYGILINGLCKMGQTRAALQVLRQIEGK--LVNTNVVMYSTIIDGLCKDKLVTDA 212
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ EM ++ +V F++L+ I +K+ R+F E I PD T+N ++
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK-NINPDAYTFNILVD 271
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C+ A +++A M ++ ++P ++ L+ G+ + VL ++ R +
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YN+ I+ CK++ EA L EM +G+ P+ VTY+ I G CK G A +
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M N+ + + Y +++ CK + A+ K+ G PN T L+ GL
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451
Query: 370 SKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++ A+++ L+ + + N T+N + GL
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGL 483
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 22/292 (7%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ ++AV +F M + + S+ FN +L L K++ ++ G+KPDL T
Sbjct: 46 VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS---------------------SFGALV 223
+ +I +C + A+S+ A++ + + N ++G L+
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + +VL+ +E + + V MY+ I LCK + +A L EM+ K +
Sbjct: 166 NGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP 225
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P VT+S IYGFC G F++A + + M ++P++ + +V +CK G + A
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWN 394
+ +G P T +L+ G ++V +AK ++ ++ + + N ++N
Sbjct: 286 IAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYN 337
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P TYN +I C++ A+ ++ EM I + ++ +L+ F K + +
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKA 422
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ ++ +G++ + YN+ I LCK + A+ + ++L KG N+ TY+ I G
Sbjct: 423 IALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMING 482
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
CK+G F+EA+ M ++G+ P++ Y T++ + + E A +E + KG V
Sbjct: 483 LCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +V +N L+ + + + K V + + P+ +YN +I FC+
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV-LSIISRMRVAPNSRSYNIMINGFCKIK 347
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM + I P+ ++ +L+ G K + +++ M + + + YN
Sbjct: 348 MVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYN 407
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I CK + +A AL+ ++ G++PN TY+ I G CK G + A+ ++ +
Sbjct: 408 SLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIK 467
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + N+ Y M+ +CK G ++ A + G +P+ T ++++ L + +A
Sbjct: 468 GYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKA 527
Query: 376 KELI 379
++L+
Sbjct: 528 QKLL 531
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGI 177
+A +A EM + + + +N+L+ + K VK++ K +GI
Sbjct: 380 KAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI-----KEHGI 434
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P++ TYN +I C+ +A + ++ K NA ++ ++ G KE +++
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEV 494
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+L ME G+ Y I +L + +A+ LL EM+ KG+
Sbjct: 495 LLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 5/311 (1%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEH 128
+H L FS+ +N +++ YF+ Q L + +LQ FH+ + + N+T
Sbjct: 151 THQSNLVFSVLMNAYTDSGYFSDAIQCFR-LVRKHNLQIP-FHSCGYLFDRLMKLNLTSP 208
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A ++E+ + V FN L+ L E + +F E K G++P + ++N +I
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLI 267
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+S + + + M + P+ ++ L+ G KE + +D NK+ M G+
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV 327
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ I+ C + + +ML KG+KP+ +TY+ I G CK G+ EAKK
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL 387
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M+ GL P+ Y ++ CK GD E+AL KE + +G + +L++G
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447
Query: 369 ASKVSEAKELI 379
+V EA+ +
Sbjct: 448 EGQVIEAERTL 458
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 14/303 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNE-----RFHAHSIILYGQANMTEH 128
D +S+ IN L + + ++ E+ R + N+ + H + G+A++
Sbjct: 294 DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVT--GRADL--- 348
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
+ +++M ++ V +N L+ L D +E K++ IE + G+KPD TY +I
Sbjct: 349 GMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLI 407
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ D SA I EM ++ I+ + +F AL++GF +E + + + L+ M G+K
Sbjct: 408 DGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIK 467
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y + IH CK LL EM G P VTY+ + G CK G + A
Sbjct: 468 PDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANML 527
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M N G+ P+ Y ++ CK G+ E F K KG V ++ + SL+ L
Sbjct: 528 LDAMLNLGVVPDDITYNILLEGHCKHGNRED---FDKLQSEKGLVQDYGSYTSLIGDLRK 584
Query: 369 ASK 371
K
Sbjct: 585 TCK 587
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 5/260 (1%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ + AVR + E ++ + N +LL L + + V+R+F + P P++ T+
Sbjct: 137 LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-----PNVFTF 191
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI C+ + + A S+ + M P+ +F +L+ G+ K + ++V ++++ M R
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K+ V YN I+ CK + A M +G+ N VT+S F+ FCK+G E
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A K + M G++ N Y ++ CK G + A+ E + +G N T LV
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 365 GLAGASKVSEAKELIGLVKE 384
GL KV+EA++++ ++++
Sbjct: 372 GLCKERKVAEAEDVLRMMEK 391
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M E V FN+L+ + EV+++ E ++ G K D+ TYN +I FC
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFC 269
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +AY A M R+ + N +F V F KE + K+ M GM
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I CK + +A LLDEM+ +G+ N VTY+ + G CK+ EA+ R+M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G+ N +Y T+++ + E ALG E KG + + +L+ GL K+
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449
Query: 373 SEAKELI 379
EAK L+
Sbjct: 450 DEAKSLL 456
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 3/283 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D + F+ I+ + + + Q +EE++ R + + +++I + + E A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M + +V F+ + A +E ++F + + G+ + TY +I C
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTC 339
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A +L EM R+ + N ++ LV G KE K + VL+MME+ G+++
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y IH + +A LL EM +KG++ + Y I G C +EAK M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
SGL PN +Y TM+ K G A+ ++ + G+ PN
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 126/327 (38%), Gaps = 29/327 (8%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ FS ++ + + +++ R NE + I +A + A+ E
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + L+ L + E + V K G++ + Y +I +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA-GVRANELLYTTLIHGHFMNK 412
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+S A +L+EM K ++ + S +GAL+ G K ++ +L M+ G++ +Y
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 256 VRIHSLCKLRKCAEAKALL----------------------DEMLSKGMKPNSVTYSHFI 293
+ + K K EA A+L +EM+ KGM + V Y+ +
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 532
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+ K GN +A M +SGL + Y + C A E I G
Sbjct: 533 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 592
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIG 380
P+ L+T ++ E +EL G
Sbjct: 593 PDRAVYNCLIT------QIPEIRELGG 613
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A + + L+E+ + NE I + Q + E A
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 413
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M EH ++ +NAL+ + +F P KP+ TY ++ C
Sbjct: 414 EQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCN 469
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A +LAEM +K PN +F LV+ F ++ ++ ++++ M +G +
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + + EA LL ++S G+ P+ VTYS I ++ EEA K + I+
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P + +Y ++ +CK + + A+ F ++ G +PN T +L+ GLA +
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649
Query: 374 EAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
E ++L+ +E ++ V N +E P+
Sbjct: 650 ETRDLL---RELCSRGVLNKNLLEEWRPK 675
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + TY +++A C+S+ A +L EM K PN ++ ++ G +E + +D
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L + YG + Y + LC ++ + + L EM+ K PN VT+ +
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + MS G + N+++ ++ +CK G + A F + G P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + +AKEL+ +V++ N T+N
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM ++ +N ++ + + R F+ +YG +PD +Y V
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA-REFLNRLSSYGFQPDTVSYTTV 256
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + + AEM K+ PN +F LV F + E +VL+ M +G
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ ++ N+ I+++CK + +A L+ M S G P++++Y+ + G C+ +E+AK+
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M PN + T + +C+ G E A ++ G N T +LV G
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436
Query: 368 GASKVSEAKEL 378
+V A EL
Sbjct: 437 VQGRVDSALEL 447
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 9/322 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA--NMTEHAVRTF 133
+ +++ + + ++ F + L+E++ + N +++I+ G + A
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN--IVTYNVIINGMCREGRVDDAREFL 238
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ + + ++ +L L AK +++V+ +F E + P+ T++ +++ FC
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDMLVRFFCR 297
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M N + ++ K+ + +D + L M YG
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + LC+ + +AK LL EM+ K PN VT++ FI C+ G E+A MS
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G N Y +V C G ++AL K PN T +L+TGL A ++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 474
Query: 374 EAKELIG-LVKEKFTKNVDTWN 394
A EL+ ++++ NV T+N
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFN 496
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A R + + V A+N L+ +R+ P + PD TY
Sbjct: 94 TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYT 149
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C+ A S+L +M + +P+ ++ L+ K + +VL M
Sbjct: 150 PIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 209
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YNV I+ +C+ + +A+ L+ + S G +P++V+Y+ + G C +E+
Sbjct: 210 GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 269
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ + M PN + +V F C+GG E A+ ++ G N T ++
Sbjct: 270 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 366 LAGASKVSEAKELI 379
+ +V +A + +
Sbjct: 330 ICKQGRVDDAFQFL 343
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 4/237 (1%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
NA L L D E R ++ + G PD+ ++I+ C +S A +L +
Sbjct: 47 NARLRRLIARDDLAEAAR-LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
R + ++ LVAG+ + Y ++ +++ + Y I LC +
Sbjct: 106 RSGTAVDVFAYNTLVAGYCR---YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG 162
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA +LLD+ML +G +P+ VTY+ + CK F +A + M G +PN Y ++
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
MC+ G + A F + G+ P+ + +++ GL A + + +EL + EK
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 5/260 (1%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ + AVR + E ++ + N +LL L + + V+R+F + P P++ T+
Sbjct: 137 LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-----PNVFTF 191
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI C+ + + A S+ + M P+ +F +L+ G+ K + ++V ++++ M R
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K+ V YN I+ CK + A M +G+ N VT+S F+ FCK+G E
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A K + M G++ N Y ++ CK G + A+ E + +G N T LV
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 365 GLAGASKVSEAKELIGLVKE 384
GL KV+EA++++ ++++
Sbjct: 372 GLCKERKVAEAEDVLRMMEK 391
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M E V FN+L+ + EV+++ E ++ G K D+ TYN +I FC
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFC 269
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +AY A M R+ + N +F V F KE + K+ M GM
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I CK + +A LLDEM+ +G+ N VTY+ + G CK+ EA+ R+M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G+ N +Y T+++ + E ALG E KG + + +L+ GL K+
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449
Query: 373 SEAKELI 379
EAK L+
Sbjct: 450 DEAKSLL 456
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 147/329 (44%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D + F+ I+ + + + Q +EE++ R + + +++I + + E A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M + +V F+ + A +E ++F + + G+ + TY +I C
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTC 339
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A +L EM R+ + N ++ LV G KE K + VL+MME+ G+++
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y IH + +A LL EM +KG++ + Y I G C +EAK M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
SGL PN +Y TM+ K G A+ ++ + G+ PN T +L+ GL A +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Query: 373 SEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
EA +++ NV + + GL
Sbjct: 520 DEAISHFNKMRDLGLDPNVQAYTALVDGL 548
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 1/290 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ FS ++ + + +++ R NE + I +A + A+ E
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + L+ L + E + V K G++ + Y +I +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA-GVRANELLYTTLIHGHFMNK 412
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+S A +L+EM K ++ + S +GAL+ G K ++ +L M+ G++ +Y
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + K K EA A+L ++L G +PN +TY I G CK G+ +EA + M +
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GL PN Y +V +CK G A+ E + KG + +L+ G
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G++ D+ Y +I+ C A S+L +MD ++PN + ++ +K K
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ +LQ + G + V Y I LCK EA + ++M G+ PN Y+
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G CK+G EA + + M + G+S + VY ++ K G+ A + I G
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL 378
+ ++G + + EA+E+
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREV 630
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+E A+ EM L + + AL+ L E K + + ++ G++P+ Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES-GLEPNYIIYT 472
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ A +S A ++L ++ +PN ++ AL+ G K ++ M
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ V Y + LCK EA L +EM+ KGM + V Y+ + G+ K GN +A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M +SGL + Y + C A E I G P+ L++
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 366 LAGASKVSEAKEL 378
+ EA L
Sbjct: 653 YQKLGNLEEAISL 665
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A+ F +M + L +V A+ AL+ L E ++F E G+ D
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK-GMSLDK 573
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y ++ + + + A+++ A+M ++ + + ++GF + +V
Sbjct: 574 VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSE 633
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
M +G+ ++YN I KL EA +L DEM
Sbjct: 634 MIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 5/260 (1%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ + AVR + E ++ + N +LL L + + V+R+F + P P++ T+
Sbjct: 137 LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-----PNVFTF 191
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI C+ + + A S+ + M P+ +F +L+ G+ K + ++V ++++ M R
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K+ V YN I+ CK + A M +G+ N VT+S F+ FCK+G E
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A K + M G++ N Y ++ CK G + A+ E + +G N T LV
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 365 GLAGASKVSEAKELIGLVKE 384
GL KV+EA++++ ++++
Sbjct: 372 GLCKERKVAEAEDVLRMMEK 391
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M E V FN+L+ + EV+++ E ++ G K D+ TYN +I FC
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFC 269
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +AY A M R+ + N +F V F KE + K+ M GM
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I CK + +A LLDEM+ +G+ N VTY+ + G CK+ EA+ R+M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G+ N +Y T+++ + E ALG E KG + + +L+ GL K+
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449
Query: 373 SEAKELI 379
EAK L+
Sbjct: 450 DEAKSLL 456
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 147/329 (44%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D + F+ I+ + + + Q +EE++ R + + +++I + + E A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M + +V F+ + A +E ++F + + G+ + TY +I C
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTC 339
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A +L EM R+ + N ++ LV G KE K + VL+MME+ G+++
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y IH + +A LL EM +KG++ + Y I G C +EAK M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
SGL PN +Y TM+ K G A+ ++ + G+ PN T +L+ GL A +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Query: 373 SEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
EA +++ NV + + GL
Sbjct: 520 DEAISHFNKMRDLGLDPNVQAYTALVDGL 548
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 1/290 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ FS ++ + + +++ R NE + I +A + A+ E
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + L+ L + E + V K G++ + Y +I +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA-GVRANELLYTTLIHGHFMNK 412
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+S A +L+EM K ++ + S +GAL+ G K ++ +L M+ G++ +Y
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + K K EA A+L ++L G +PN +TY I G CK G+ +EA + M +
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GL PN Y +V +CK G A+ E + KG + +L+ G
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G++ D+ Y +I+ C A S+L +MD ++PN + ++ +K K
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ +LQ + G + V Y I LCK EA + ++M G+ PN Y+
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G CK+G EA + + M + G+S + VY ++ K G+ A + I G
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL 378
+ ++G + + EA+E+
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREV 630
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 1/274 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+E A+ EM L + + AL+ L E K + + ++ G++P+ Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES-GLEPNYIIYT 472
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ A +S A ++L ++ +PN ++ AL+ G K ++ M
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ V Y + LCK EA L +EM+ KGM + V Y+ + G+ K GN +A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M +SGL + Y + C A E I G P+ L++
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 366 LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ EA L ++ D+ +AG
Sbjct: 653 YQKLGNLEEAISLQDEMERVLPSCTDSDTATDAG 686
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 5/275 (1%)
Query: 128 HAVRTF-KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
H R F +EM L +V + L+ L E + + K P TYN
Sbjct: 63 HEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNS 120
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ +S AY +L EM P+ ++ L+ GF K +K +D +V + + G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSVTYSHFIYGFCKDGNFEEA 305
+ V Y+ I LCK + EA L M+ G PN+VTY+ I GFC+ G +EA
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M+ +G SP+ Y T++ CK + A + KG P+ T SL+ G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L +++S+A ++G ++ K + V T+N I G
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ T+ ++ C + S A IL EM RKS P ++ ++ G+ + + E+
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K M+E V +N+ I LCK+ + +EA L++E + P+ V Y+ I G
Sbjct: 346 RKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDG 403
Query: 296 FCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
C++ +EA + YR ++ G PNS Y T++ +C G + A G+ I KG VP
Sbjct: 404 LCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGY----IEKGCVP 459
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N T L+ A++ +A+EL+
Sbjct: 460 NIGTYNLLIDAFRKANRDEDARELL 484
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 16/336 (4%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHA 129
H D ++ I+ L N + ++LEE+ R N +++++ G + + A
Sbjct: 43 HPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN--VVTYTVLIDGLCKGGRVDEA 100
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V +M + + +V +N+L+ L A+ E + E + G PD+ TY +I
Sbjct: 101 VALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLIT 158
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
FC+S S A + ++ + +P+ ++ L+ G KE + ++ + M +KS
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM----IKS 214
Query: 250 GVSM-----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G M YN I C++ K EA LL+ M G P+ VTY+ + GFCK ++
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 274
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M+ GL+P+ + +++ +C+ A+ E K P T +++
Sbjct: 275 AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 334
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
G A+++ EA++ + L + NV ++N + GL
Sbjct: 335 GYCRANQLEEARKFM-LEEMDCPPNVVSFNIMIRGL 369
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+F+ + G PD+ TY VI A C + A L EM +++ PN ++ L+ G
Sbjct: 32 IFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGL 91
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + ++ +L M + + + V+ YN I LCK + +EA LL+EM+ G P+
Sbjct: 92 CKGGRVDEAVALLSKMRKKCVPTAVT-YNSLISGLCKAERASEAYDLLEEMVYSGCIPDI 150
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
TY+ I GFCK ++A + + + G P+ Y ++ +CK G + A+
Sbjct: 151 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGR 210
Query: 347 SIAKG-WVPNFTTMKSLVTGLAGASKVSEAKELI 379
I G +PN T SL++G K+ EA L+
Sbjct: 211 MIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 2/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ ++ ++ A+R F+++ R V ++ L+ L KE +F K+ P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +I FC A ++L M P+ ++ L+ GF K + +D +L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M R G+ V + + LC+ + ++A +L EM K P TY+ + G+C+
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
EEA+KF ++ PN + M+ +CK A+ +E+ + P+
Sbjct: 340 NQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397
Query: 360 KSLVTGLAGASKVSEA 375
+++ GL KV EA
Sbjct: 398 TTVIDGLCREKKVDEA 413
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY +I+ C+ A L +M K P+ ++ A++ E + + K L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + V Y V I LCK + EA ALL +M K + P +VTY+ I G CK
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
EA M SG P+ Y T++ CK + AL ++ +A+G+ P+ T
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKE-KFTKNVDTWNEIEAG 399
L+ GL ++ EA +L G ++K N T+N + +G
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ +L+ G K ++ E L M G V Y IH+LC + EA+ L+EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
++ + PN VTY+ I G CK G +EA M + P + Y +++ +CK
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
A +E + G +P+ T +L+TG + K +A + LV F +V T++ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 397 EAGL 400
GL
Sbjct: 192 IDGL 195
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N AV EM +V +N +L A +E ++ +E P++
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE---EMDCPPNV 359
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ- 240
++N +I+ C+ + SS A ++ E R+ P+ + ++ G +E+K ++ +V +
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M+E G Y+ I LC A+ ++ KG PN TY+ I F K
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKAN 475
Query: 301 NFEEAKKFYRIMSNSG 316
E+A++ M G
Sbjct: 476 RDEDARELLDDMVQRG 491
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VTY+ I G CK E+A F M + G P+ Y +++ +C A F +E
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ PN T L+ GL +V EA L+ +++K T+N + +GL
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGL 125
>gi|86438766|emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 124/230 (53%), Gaps = 3/230 (1%)
Query: 17 KHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRL 76
K+HR + + DK S+D L +K+E NP+++ E+ RA A +R
Sbjct: 59 KNHRRRPPDAPAGAEDKG---SRDSETPLLVRIKNERNPKRLYELFRANAHNRLLVENRF 115
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
AF A+ +LS A + + + LE+ K P + E F I LYG+A M EHA+RTF+EM
Sbjct: 116 AFQDAVARLSGARRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPEHALRTFQEM 175
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + + +FNA L L A+ + + ++F E P YG++ D +YN V+K C+
Sbjct: 176 EMYGCTCTNKSFNATLKVLMQAQLFDKALQLFEEGPGKYGVELDDISYNTVVKMMCDMGQ 235
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+AY ++ EM+++ I+P+ ++ L+A FYK + E + + +M G
Sbjct: 236 LRAAYRVMQEMEKEGIQPDVITYTTLMAAFYKNGQREVGDGLWNLMRLRG 285
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
R+I + ++ A EM+ SF A + + + + +K LQ+ E
Sbjct: 154 RIIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLMQAQLF---DKALQLFEEG 210
Query: 246 GMKSGVSM----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
K GV + YN + +C + + A ++ EM +G++P+ +TY+ + F K+G
Sbjct: 211 PGKYGVELDDISYNTVVKMMCDMGQLRAAYRVMQEMEKEGIQPDVITYTTLMAAFYKNGQ 270
Query: 302 FEEAKKFYRIMSNSGLSP 319
E + +M G P
Sbjct: 271 REVGDGLWNLMRLRGCMP 288
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 4/271 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A + F EM E + ++ +N L+ L E +V + K+ GI P+L TYN
Sbjct: 284 TKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSDGINPNLITYN 342
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A S+ ++ + + P+ ++ LV+GF K+ KV++ ME
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K Y + I + ++ +A L M G+ P+ TYS I+GFC G EA
Sbjct: 403 GIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEA 462
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +++M L PN +Y TMV CK G AL +E K PN + + ++
Sbjct: 463 SRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522
Query: 366 LAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
L K EA+ GLV++ +D + I
Sbjct: 523 LCKERKSKEAE---GLVEKMIDTGIDPSDSI 550
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+L TYN V+ C+ + A+ + EM + + N ++ L+ G +E K +
Sbjct: 263 GVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
NKV+ M+ G+ + YN I C + K +A +L ++ S+G+ P+ VTY+ + G
Sbjct: 323 NKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK G+ A K + M G+ P+ Y ++ + + E A+ G P+
Sbjct: 383 FCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPD 442
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T L+ G +++EA L L V +K N +N + G
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLG 487
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 151/374 (40%), Gaps = 54/374 (14%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGIS--QYLEELKTRPDLQNERFHAHSIILYGQANMTEH 128
SH L + K+ ++ +F S Y+ E +T R + I Y Q+ +
Sbjct: 56 SHAQSLLLQVISGKI-QSQFFTSSSLLHYVTESETSE--TKSRLYEVMINAYVQSQSLDS 112
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN--R 186
++ F EM + FN LL + + + + R F E IK DLD Y+
Sbjct: 113 SISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK----IKVDLDVYSFGI 168
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
VIK CE+ + ++ +L E+ PN + L+ G K + E + M ++G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFG 228
Query: 247 MKSGVSMYNVRIHSL-----------------------------------CKLRKCAEAK 271
+ + Y V IH L CK + +A
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAF 288
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L DEM +G+ N VTY+ I G C++ EA K M + G++PN Y T++
Sbjct: 289 KLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL------AGASKVSEAKELIGLVKEK 385
C G AL C++ ++G P+ T LV+G +GA KV + E G+ K
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408
Query: 386 FTKN--VDTWNEIE 397
T +DT+ ++
Sbjct: 409 ITYTILIDTFARMD 422
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 57 KILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
K L +CR + L+P + ++I ++ + +G + ++E++ R ++ +
Sbjct: 356 KALSLCRDLKSRGLSP----SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + + + E A++ M+E L V ++ L+ I E R+F +
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLF-KLMV 470
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++P+ YN ++ +C+ S A + EM+ K + PN +S+
Sbjct: 471 AKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY-------------- 516
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
RY I LCK RK EA+ L+++M+ G+ P+
Sbjct: 517 ----------RY-----------MIEVLCKERKSKEAEGLVEKMIDTGIDPS 547
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 5/275 (1%)
Query: 128 HAVRTF-KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
H R F +EM L +V + L+ L E + + K P TYN
Sbjct: 63 HEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNS 120
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ +S AY +L EM P+ ++ L+ GF K +K +D +V + + G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSVTYSHFIYGFCKDGNFEEA 305
+ V Y+ I LCK + EA L M+ G PN+VTY+ I GFC+ G +EA
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M+ +G SP+ Y T++ CK + A + KG P+ T SL+ G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L +++S+A ++G ++ K + V T+N I G
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 8/213 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ T+ ++ C + S A IL EM RKS P ++ ++ G+ + + E+
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K M+E V +N+ I LCK+ + +EA L++E + P+ V Y+ I G
Sbjct: 346 RKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDG 403
Query: 296 FCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
C++ +EA + YR ++ G PNS Y T+V +C G + A G+ I KG VP
Sbjct: 404 LCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGY----IEKGCVP 459
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI-GLVKEKF 386
N T L+ A++ +A+EL+ +V+ F
Sbjct: 460 NIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 16/336 (4%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHA 129
H D ++ I+ L N + ++LEE+ R N +++++ G + + A
Sbjct: 43 HPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN--VVTYTVLIDGLCKGGRVDEA 100
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V +M + + +V +N+L+ L A+ E + E + G PD+ TY +I
Sbjct: 101 VALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLIT 158
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
FC+S S A + ++ + +P+ ++ L+ G KE + ++ + M +KS
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM----IKS 214
Query: 250 GVSM-----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G M YN I C++ K EA LL+ M G P+ VTY+ + GFCK ++
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 274
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M+ GL+P+ + +++ +C+ A+ E K P T +++
Sbjct: 275 AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 334
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
G A+++ EA++ + L + NV ++N + GL
Sbjct: 335 GYCRANQLEEARKFM-LEEMDCPPNVVSFNIMIRGL 369
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TY VI A C + A L EM +++ PN ++ L+ G K + ++
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L M + + + V+ YN I LCK + +EA LL+EM+ G P+ TY+ I G
Sbjct: 101 VALLSKMRKKCVPTAVT-YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG-WVP 354
FCK ++A + + + G P+ Y ++ +CK G + A+ I G +P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N T SL++G K+ EA L+
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLL 244
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 41/311 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ ++ ++ A+R F+++ R V ++ L+ L KE +F K+ P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +I FC A ++L M P+ ++ L+ GF K + +D +L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M R G+ V + + LC+ + ++A +L EM K P TY+ + G+C+
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL------------------ 341
EEA+KF ++ PN + M+ +CK A+
Sbjct: 340 NQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397
Query: 342 -----GFCKESIAK-------------GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
G C+E G +PN T +LVTGL A + A+ G ++
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRAR---GYIE 454
Query: 384 EKFTKNVDTWN 394
+ N+ T+N
Sbjct: 455 KGCVPNIGTYN 465
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY +I+ C+ A L +M K P+ ++ A++ E + + K L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + V Y V I LCK + EA ALL +M K + P +VTY+ I G CK
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
EA M SG P+ Y T++ CK + AL ++ +A+G+ P+ T
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKE-KFTKNVDTWNEIEAG 399
L+ GL ++ EA +L G ++K N T+N + +G
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ +L+ G K ++ E L M G V Y IH+LC + EA+ L+EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
++ + PN VTY+ I G CK G +EA M + P + Y +++ +CK
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
A +E + G +P+ T +L+TG + K +A + LV F +V T++ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 397 EAGL 400
GL
Sbjct: 192 IDGL 195
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N AV EM +V +N +L A +E ++ +E P++
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE---EMDCPPNV 359
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ- 240
++N +I+ C+ + SS A ++ E R+ P+ + ++ G +E+K ++ +V +
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M+E G Y+ + LC A+ ++ KG PN TY+ I F K
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKAN 475
Query: 301 NFEEAKKFYRIMSNSG 316
E+A++ M G
Sbjct: 476 RDEDARELLDDMVQRG 491
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VTY+ I G CK E+A F M + G P+ Y +++ +C A F +E
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ PN T L+ GL +V EA L+ +++K T+N + +GL
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGL 125
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P+ YN +I +C D +L EM+ K + P ++G L++
Sbjct: 281 LIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLG 340
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
++ E + +L M + V +YN I +LCK R ++A +L +M + G P+++
Sbjct: 341 RKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAI 400
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T+S I G C++G +EA++ R + L+PN S Y ++++ C G+ A E
Sbjct: 401 TFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEM 460
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-----KNVDTWNEIEAGL 400
+ +G P+ T +L+ GL A +VSEA LV+EK + + +N + +GL
Sbjct: 461 MERGHTPDVVTFGALIHGLVVAGQVSEAL----LVREKMAARQLLPDANIYNVLISGL 514
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 4/308 (1%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I+ L E++ R N + + I + A+ K+M F+ L+
Sbjct: 348 IASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLIS 407
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L +E +R+ E + + + P+L +Y +I FC + A ++L EM +
Sbjct: 408 GLCQEGRVQEAERLLRETTR-WELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHT 466
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ +FGAL+ G + + V + M + ++YNV I LCK + A+ L
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++EML + + P+ Y+ I GF ++ + +EA+K + M G+ P+ Y M+ C+
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586
Query: 334 GGDYETALGFCKESIAK-GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVD 391
G A+ C ++ K G +P+ T +L+ G A +S A L+ ++K + NV
Sbjct: 587 FGMMNEAVE-CMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVV 645
Query: 392 TWNEIEAG 399
++ + G
Sbjct: 646 AYSSLING 653
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 137/333 (41%), Gaps = 9/333 (2%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL +S S +L+ A P D + FS I+ L + + L E TR
Sbjct: 373 ALCKCRSASQALVVLKQMFAGGCDP----DAITFSTLISGLCQEGRVQEAERLLRE-TTR 427
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRT--FKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+L N +++ +++G E V + EM E V F AL+ L +A
Sbjct: 428 WEL-NPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVS 486
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E V E + PD + YN +I C+ +A +++ EM +++ P+ + L
Sbjct: 487 EALLVR-EKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTL 545
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF + E ++ K+ + ME+ G+ V YN I C+ EA + M G
Sbjct: 546 IDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGR 605
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ TY+ I G+ K GN A M PN Y +++ CK GD + A
Sbjct: 606 IPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAEC 665
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++G PN T L+ L KV A
Sbjct: 666 LFGSMESQGLFPNVITYTILIGSLFKKDKVVRA 698
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 126/356 (35%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F I+ L A + E++ R L + + I + M A
Sbjct: 468 DVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLI 527
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM E + + L+ + E +++F EF + GI PD+ YN +IK +C+
Sbjct: 528 EEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF-EFMEQKGIHPDVVGYNAMIKGYCQ 586
Query: 194 -----------------------------------SSDSSSAYSILAEMDRKSIKPNASS 218
+ S A S+L +M ++ +PN +
Sbjct: 587 FGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVA 646
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ +L+ G+ K + + ME G+ V Y + I SL K K A + ML
Sbjct: 647 YSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYML 706
Query: 279 SKGMKPNSVTYSHFIYGFCKDG------------NFEEAKKF---YRIMSNSGLSPNSSV 323
PN T + G C N +R + N P +S
Sbjct: 707 LNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSA 766
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ +C AL + KG+ P+ T SL+ G K E + ++
Sbjct: 767 YNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+V G E E K+++ G YNV I C+ LL EM +KG
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKG 324
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P VTY + + G+ E+ M L PN +Y +++ +CK AL
Sbjct: 325 LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQAL 384
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
K+ A G P+ T +L++GL +V EA+ L+
Sbjct: 385 VVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLL 422
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMM-ERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P + GALVA + ++ Q E +G G + N + L + R+ +A+
Sbjct: 186 PTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARK 245
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L DEML++ + + + G C +G E+ K +G PN+ Y ++ C
Sbjct: 246 LYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYC 305
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVD 391
+ GD + E AKG +P T +L++ L + + L+ ++E + NV
Sbjct: 306 RRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQ 365
Query: 392 TWNEI 396
+N +
Sbjct: 366 IYNSV 370
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 47/356 (13%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNG----ISQYLEELKTRPDLQNERFHAHSII 118
R A P + + ++ + A +G +S EE +P+L + +
Sbjct: 179 RGAGCAPNA----VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
+A E A + F EM L V ++N LL E VF E + G+
Sbjct: 235 ---KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV 290
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ T+ +I A C++ + A +++A+M + ++ N +F AL+ GF K+ +D
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM--------------------- 277
++ M + G++ V YN I+ CKL + A+ L+ EM
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 278 --------------LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
L KG+ P+++TYS I G C++ +A + + M G+ P+
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T++ CK G+ E AL E I KG +P+ T L+ GL+ +++ EA L+
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I+ +A + +++ R NE I + + + A+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + ++ SV +NAL+ ++ R I + +KPD+ TY+ +I +C+
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYC-KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ SA+ + +M +K + P+A ++ +L+ G +E++ D ++ + M + G++
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI-------------------- 293
Y I CK +A +L DEM+ KG+ P+ VTYS I
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530
Query: 294 ------------------------------YGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
GFC G +EA K Y+ M + + SV
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C+GG+ AL F K+ + G+ PN T+ SLV GL V EA I
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AV +M + +N L+ A A + +RV + KP+L T+N
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C++ A + EM R+ + P+ S+ L++G+ K + V M + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + IH+ CK +A AL+ +M +G++ N VT++ I GFCK G ++A
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M G+ P+ Y ++ CK G + A +E AK P+ T ++++G
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 367 AGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+ A +L ++K+ + T++ + GL
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+G M E + ++ M E+ + S+ ++N L+ L +K + +RVF E + I P
Sbjct: 189 FGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVF-EVMENGKIGP 247
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +IK +CE + A+ L M+ +++ P+ ++ L+ Y E ++ +
Sbjct: 248 DVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLY 307
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G++ +Y++ I LCK K E + + M+SKG K N Y+ I K
Sbjct: 308 HEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKC 367
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN EA ++ M GL P+ Y +V +CK G + AL + + KG N
Sbjct: 368 GNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFY 427
Query: 360 KSLVTGLAGASKVSEAKEL 378
SL+ GL + +V EA+ +
Sbjct: 428 SSLIDGLGKSGRVDEAERI 446
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 145/360 (40%), Gaps = 10/360 (2%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDRLAFS--IAINKLSEANYFNG---ISQYLEEL 101
+L+KS N + E+ E+ ++ FS +N L + + + + +E
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
K PD+ + I Y + T A K M+ + + L+ A D+
Sbjct: 244 KIGPDVVT---YNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDF 300
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
++ E + G++ Y+ VI C+ Y++ M K K N + + A
Sbjct: 301 DSCLGLYHEMDEK-GLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTA 359
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ K + + + M++ G++ Y V ++SLCK + EA ++ KG
Sbjct: 360 LIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKG 419
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ N++ YS I G K G +EA++ + M G P+S Y ++ + K G + AL
Sbjct: 420 VAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEAL 479
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
K G T L+TGL + EA L L+ +K T + + GL
Sbjct: 480 ALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGL 539
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 4/268 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +S+++ G + F+ M + +V + AL+ + + E +F
Sbjct: 320 HVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKR 379
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++PD TY ++ + C+S A + K + NA + +L+ G K
Sbjct: 380 MKKE-GLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSG 438
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ ++ M + G YN I +L K K EA AL M G TY+
Sbjct: 439 RVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYT 498
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G ++ EEA + +M + G++P ++ + + +C G A E
Sbjct: 499 ILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPM 558
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G +P T ++ L A ++ EA +L
Sbjct: 559 GVIPE-TAFDDMINILCKAGRIKEACKL 585
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 23/287 (8%)
Query: 100 ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIA 158
EL+T+PD+ A+R F + K H++ + +L+ L
Sbjct: 119 ELQTKPDV---------------------AIRFFTWAGKQKKYTHNLECYVSLIDVLATN 157
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
VK VF +F K G+ + + N +IK+F + M I+P+ S
Sbjct: 158 GVLDSVKSVFSKF-KEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFS 216
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ LV G + E +V ++ME + V YN I C++ K +A L M
Sbjct: 217 YNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAME 276
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + P+ +TY I +G+F+ Y M GL VY ++ +CK G
Sbjct: 277 LRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRV 336
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ I+KG N +L+ A + EA L +K++
Sbjct: 337 EGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE 383
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI-EFPKTYGIKPDLDTYNRVIKAF 191
+ EMDE L ++ ++ L KD K V+ + E + G K ++ Y +I +
Sbjct: 307 YHEMDEKGLEIPPHVYSLVIGGL--CKDGKRVEGYTVFENMISKGCKANVAIYTALIDSN 364
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
+ + A + M ++ ++P+ ++G +V K + ++ + ++ G+
Sbjct: 365 AKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNA 424
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ I L K + EA+ + EM+ KG P+S Y+ I K G +EA +
Sbjct: 425 MFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKR 484
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G Y ++ + + E AL I KG P ++L TGL + K
Sbjct: 485 MEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGK 544
Query: 372 VSEAKELI 379
V+ A +++
Sbjct: 545 VARACKIL 552
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+++L+ L + E +R+F E K G PD YN +I A + A ++ M
Sbjct: 427 YSSLIDGLGKSGRVDEAERIFYEMVKK-GCPPDSYCYNALIDALAKCGKIDEALALSKRM 485
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ ++ L+ G ++E + E+ + +M G+ + + LC K
Sbjct: 486 EVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKV 545
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A A +LDEM G+ P + + I CK G +EA K + + G V +
Sbjct: 546 ARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVL 604
Query: 328 VYFMCKGGDYETALGFCKESIAKGW 352
+ + K G+ + AL + I G+
Sbjct: 605 INALRKAGNADLALKLMRSKIGIGY 629
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 153/347 (44%), Gaps = 10/347 (2%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
L L+K+ P K L+ A +H D+ ++ + + L A N +L +K R
Sbjct: 92 VLRLIKT---PSKALQFFNWAPELGFTHNDQ-SYFLMLEILGRARNLNVARNFLFSIKRR 147
Query: 105 PDLQ---NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+ +RF I YG+A + + +V+ F M + SV FN+LLL L
Sbjct: 148 SNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRT 207
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+ VF E TYG+ PD T+N +I+ FC++S + EM R P+ ++
Sbjct: 208 NMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNT 267
Query: 222 LVAGFYKEEKYEDVNKVLQMMER--YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
LV G + K + V+ M + + V Y + C + EA + +EM+S
Sbjct: 268 LVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVS 327
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
KG+KPN +TY+ I G C+ ++ K+ + + G P++ T++ C G+
Sbjct: 328 KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLN 387
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
AL ++ + P+ T L+ L A++L + EK
Sbjct: 388 DALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEK 434
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 125/280 (44%), Gaps = 9/280 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ F+EM L+ + +N L+ L + ++K++F G P
Sbjct: 309 YCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIP 368
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T N ++ A C + + + A + +M +++P+++++ L+ + +E ++
Sbjct: 369 DTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428
Query: 240 Q-------MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ G V+ Y LC+ K A+A+ + +++ +G + + +++
Sbjct: 429 DELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKIL 487
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C++G FE + +M P+ Y +++ + + G+ A ++ I
Sbjct: 488 IKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSH 547
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVD 391
VP +T S++ L E+ I L+ E K +N++
Sbjct: 548 VPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNIN 587
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ + D + + P ++G KP YN V+K C + A ++ EM
Sbjct: 80 YNVLMDGMCGEGDVDDALELLRNLP-SHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 138
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
R++ PN ++F ++ ++ + ++L+ M ++G + + YN I+ LC+ R
Sbjct: 139 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 198
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A LL +M S G KP+ VTY+ + G C + +A++ M+ +G P++ + T+
Sbjct: 199 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTL 258
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ F+C+ G A+ K+ KG PN T ++++GLA A+K+ +A EL
Sbjct: 259 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
++++Y + + + A++ ++M +H ++ +NA++ L ++ + + K
Sbjct: 151 NVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-K 209
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+YG KPD+ TYN ++K C ++ A ++ M + P+ +F L+ ++
Sbjct: 210 SYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMV 269
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
D +V + M G Y+ I L K K +A L +EM KG P+ + Y
Sbjct: 270 DAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 328
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
D EEA + R + +SG+SP++ +Y ++ +C+ G E A+ ++ G +
Sbjct: 329 ECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCM 388
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T L+ GLA ++EA+EL+
Sbjct: 389 PDDLTYVILIEGLAYEGYLNEARELL 414
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN +++A C+ A ++ M + PN ++ L+ G E +D
Sbjct: 37 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ + +G K YN + LC + +A L+ EML + PN T++ IY
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G ++A + MS G + N Y ++ +C+ + + A+G + + G P+
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
T +L+ GL A++ +A+EL+ + T+N
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELM----DNMTQN 246
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ + + H + S +N +L L A+ + + + E + P+ T+N
Sbjct: 93 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE-NCPPNEATFN 151
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI + C A +L +M + N ++ A++ G ++ + +L M+ Y
Sbjct: 152 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 211
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + YN + LC + +A+ L+D M G P++VT++ I C+ G +A
Sbjct: 212 GCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 271
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ ++ M + G +PNS Y T++ + K + AL E KG+ P+
Sbjct: 272 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 321
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 35/265 (13%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
F++ I L Q LE++ N + I + + A+ +M
Sbjct: 150 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 209
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + + +N LL L A + + + + + G PD T+N +I C+
Sbjct: 210 SYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN-GCLPDNVTFNTLIGFLCQKGLM 268
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV--------------NKVLQMME 243
A + +M K PN+ ++ +++G K K + +K+ Q++
Sbjct: 269 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLA 328
Query: 244 ----------------RYGMKSGVS----MYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
R SG+S +YN + LC+ K A ++ M+S G
Sbjct: 329 ECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCM 388
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKF 308
P+ +TY I G +G EA++
Sbjct: 389 PDDLTYVILIEGLAYEGYLNEAREL 413
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 5/315 (1%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
L P H +S+ +N + Q E +K + N + I Y M
Sbjct: 223 GLVPNPH----TYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGM 278
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A + F EM E + V +N L+ L K + E ++ + K G+ P++ TYN
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV-GLSPNIVTYN 337
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ SA + ++ + P ++ L+AG+ K E +++ ME
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ Y + I + +L +A + M G+ P+ TYS ++G C GN +EA
Sbjct: 398 CIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEA 457
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K ++ + L PNS +Y TM++ CK G AL E + G VPN + S +
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGL 517
Query: 366 LAGASKVSEAKELIG 380
L K EA+ L+G
Sbjct: 518 LCRDEKWKEAELLLG 532
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 7/319 (2%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLR 142
L +NYF+ ELK++ L F I++ G +A R ++E L
Sbjct: 134 LIRSNYFDKAWWIFNELKSKVVLDAYSF---GIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V + L+ + K +F + + G+ P+ TY+ ++ F + +
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRL-GLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ M R I PNA ++ L++ + + + KV M G+ GV YN+ I LC
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +K EA L+ ++ G+ PN VTY+ I GFC + A + + + +SGLSP
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV 369
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y T++ K + AL KE + P+ T L+ A + +A E+ L+
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429
Query: 383 -KEKFTKNVDTWNEIEAGL 400
K +V T++ + GL
Sbjct: 430 EKSGLVPDVYTYSVLLHGL 448
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV+ ++++ L ++ +N L+ + R+F + K+ G+ P L TYN +I
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQL-KSSGLSPTLVTYNTLI 375
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + + + A ++ EM+ + I P+ ++ L+ F + E ++ +ME+ G+
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLV 435
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+V +H LC EA L + ++PNSV Y+ I+G+CK+G+ A +
Sbjct: 436 PDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
M SG+ PN + + + + +C+ ++ A + I G P+ + K
Sbjct: 496 LNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+++ L+P + ++ I S+ G ++E++ R ++ + I + +
Sbjct: 360 KSSGLSP----TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFAR 415
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N TE A M++ L V ++ LL L + + KE ++F + + ++P+
Sbjct: 416 LNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH-LQPNSV 474
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
YN +I +C+ S A +L EM + + PN +SF + + ++EK+++ +L M
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534
Query: 243 ERYGMKSGVSMY 254
G+K VS+Y
Sbjct: 535 INSGLKPSVSLY 546
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 161/360 (44%), Gaps = 3/360 (0%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ + LLKSE NP L I + P F + +L + +S+ +E ++
Sbjct: 11 KRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIR 70
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDY 161
T+ E I Y + +M + A+ F+ M E + + ++N+LL AL + +
Sbjct: 71 TQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
E + F+ F +T G+ P+L TYN +IK C A +L M + P+ S+G
Sbjct: 131 DEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGT 189
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML-SK 280
L+ K D K+ M G+ V+ YN+ I K A + + +L
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ PN +Y+ I G CK G F+E+ + + M + + Y T+++ +C G+ + A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
KE G P+ +++ G A ++ E EL +++++ + V ++N + GL
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 7/311 (2%)
Query: 57 KILEICRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKT-RPDLQNERFH 113
K+ E L PE D + + + ++ L + Y N LEE + R DL +
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 433
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+ L + + E A +M +H + + NA++ A ++ R F
Sbjct: 434 SMINGLCREGRLDEVA-GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM-V 491
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G P + TYN +I ++ S AY+++ EM K KPN ++ L+ G + +K +
Sbjct: 492 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551
Query: 234 -DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+N Q +E+ G K V M+N+ IH LC K +A L EM + PN VT++
Sbjct: 552 MALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ GF K +FE A K + + G P+ Y + +C A+GF +++ +G
Sbjct: 611 MEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGV 670
Query: 353 VPNFTTMKSLV 363
+P T LV
Sbjct: 671 LPTAITWNILV 681
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 136/332 (40%), Gaps = 45/332 (13%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYG--QANMTEH 128
D +S I+ L + +G ++ +E+ PD+ ++ +L G +A E
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV-----VYNTMLNGYLRAGRIEE 343
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK--------TYGI--- 177
+ +K M++ R +V ++N L+ L E ++ P+ TYG+
Sbjct: 344 CLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402
Query: 178 ---------------------KPDLDT--YNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ DLDT Y+ +I C +L +M + KP
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N A++ GF + K ED + M G V YN I+ L K + +EA AL+
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
EML KG KPN +TYS + G C+ + A + G P+ ++ +++ +C
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G E AL E + VPN T +L+ G
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
A+++++ L EV V + K +G KP+ N VI F +S A
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTK-HGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K P ++ L+ G K E++ + +++ M G K + Y++ ++ LC+ +K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A L + L KG KP+ ++ I+G C G E+A + Y M PN + T
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ K D+E A + G P+ + + GL ++S+A +G + +
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA---VGFLNDAV 666
Query: 387 TKNV----DTWN 394
+ V TWN
Sbjct: 667 DRGVLPTAITWN 678
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 34/262 (12%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD A+S IN L + ++ L+++ N I + +A+ E A+R
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF------PK--TY--------- 175
F M +V +N L+ L+ A+ + E + E P TY
Sbjct: 487 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546
Query: 176 -----------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
G KPD+ +N +I C S A + +EM ++ PN +
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
L+ GFYK +E +K+ + +YG + + YN+ + LC + ++A L++ +
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAV 666
Query: 279 SKGMKPNSVTYSHFIYGFCKDG 300
+G+ P ++T++ + +G
Sbjct: 667 DRGVLPTAITWNILVRAVLDNG 688
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P++ YN +I C+ + AY + +EMD + I P+A ++ L+ GF +
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M + GV +YN+ I++LCK EAK LL M +G+KP VTYS + G+C
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G + AK+ + M G++PN Y M+ +CK + A+ +E + K VP+
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 326
Query: 358 TMKSLVTGLAGASKVSEAKELI 379
T SL+ GL + +++ A L+
Sbjct: 327 TYNSLIDGLCKSGRITSALNLM 348
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 16/329 (4%)
Query: 72 HLDRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMT 126
+D +++ +N K+ E + + +E+ TRP++ ++ I+ G + +
Sbjct: 112 QMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVV-----MYNTIIDGLCKDKLV 166
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
A + EMD + + L+ + + E I P + YN
Sbjct: 167 NEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI-LKNINPGVYIYNI 225
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I A C+ + A ++LA M ++ IKP ++ L+ G+ + ++ ++ M + G
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN+ I+ LCK ++ EA LL EML K M P++VTY+ I G CK G A
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + G + Y +++ +CK + + A + +G P T +L+ GL
Sbjct: 346 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405
Query: 367 AGASKVSEAKELIG--LVKEKFTKNVDTW 393
++ A+EL LVK +D W
Sbjct: 406 CKGGRLKNAQELFQHLLVKGCC---IDVW 431
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ V ++ L+ + + + K++F + G+ P++ +YN +I C+
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM-GVNPNVYSYNIMINGLCKCK 304
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++L EM K++ P+ ++ +L+ G K + ++ M G + V Y
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LCK + +A AL +M +G++P TY+ I G CK G + A++ ++ +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + Y M+ +CK G ++ AL + G +PN T + ++ L + +A
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 484
Query: 376 KELI 379
++L+
Sbjct: 485 EKLL 488
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D +Y ++ C+ ++ A +L ++ +S +PN + ++ G K++ +
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G+ Y I+ C L + A +LLDEM+ K + P Y+ I
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINA 229
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+GN +EAK +M+ G+ P Y T++ C G+ + A + G PN
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV----DTWNEIEAGL 400
+ ++ GL +V EA + L++E KN+ T+N + GL
Sbjct: 290 VYSYNIMINGLCKCKRVDEA---MNLLREMLHKNMVPDTVTYNSLIDGL 335
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++A + F M + + +V ++N ++ L K E + E + PD TYN
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK-NMVPDTVTYN 329
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+S +SA +++ EM + + ++ +L+ K + + + M+
Sbjct: 330 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ + Y I LCK + A+ L +L KG + TY+ I G CK+G F+EA
Sbjct: 390 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 449
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
M ++G PN+ + ++ + + + + A E IAKG +
Sbjct: 450 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 93/213 (43%), Gaps = 3/213 (1%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + +N+++ + + +A S+ +M+ K I+ N + L+ F + V
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L + + G + N + LC + ++ D+++++G + + V+Y + G CK
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G A K R++ + PN +Y T++ +CK A E A+G P+ T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+L+ G ++ A L+ E KN++
Sbjct: 188 YTTLIYGFCLLGQLMGA---FSLLDEMILKNIN 217
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 109 NERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
N ++++I++ G + + A+ +EM + +N+L+ L +
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ E G D+ TY ++ A C++ + A ++ +M + I+P ++ AL+ G
Sbjct: 347 LMNEMHHR-GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + ++ ++ Q + G V Y V I LCK EA A+ +M G PN+
Sbjct: 406 CKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNA 465
Query: 287 VTYSHFIYG-FCKDGNFEEAKKFYRIMSNSGL 317
VT+ I F KD N ++A+K M GL
Sbjct: 466 VTFEIIIRSLFEKDEN-DKAEKLLHEMIAKGL 496
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PD+ TY+ +I+ F A + +M ++IKP+ +F LV GF KE + +
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
VL MM +K VS +N + CK RK E K + M+ +G+KPN VTY + G+
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C +AKK + MS G++ N Y M+ CK + A+ E K +P+
Sbjct: 359 CLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
T SL+ GL + K+S A +L+ + ++ N+ T+N I L
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 1/295 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
HLD++++ IN L + Q L + + N + I + A
Sbjct: 170 HLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFD 229
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ EM ++ V ++AL+ I K+ +F + IKPD+ T+N ++ F
Sbjct: 230 LYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI-LENIKPDVYTFNILVDGF 288
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A ++L M + IKPN S+F LV GF K+ K ++ V MM + G+K V
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y + C +++ +AK + + M +G+ N +Y+ I GFCK ++A K +
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + P+ Y +++ +CK G A E +G PN T S++ L
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 44/326 (13%)
Query: 41 KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE 100
+TRAAL LL+ K+++ L+ + ++ I+ +S+ + N E
Sbjct: 188 ETRAALQLLRRVDG--KLVQ------------LNAVMYNTVIDGMSKDKHVNDAFDLYSE 233
Query: 101 L---KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ + PD+ + G+ + A+ F +M ++ V FN L+
Sbjct: 234 MVAKRISPDVVTYSALIRGFFIVGKL---KDAIDLFNKMILENIKPDVYTFNILVDGFCK 290
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
K+ K V ++ IKP++ T+N ++ FC+ ++ A M ++ IKPN
Sbjct: 291 EGRLKKAKNV-LDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVV 349
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ +L+ G+ ++ K+ M + G+ + V YN+ I+ CK++K +A L EM
Sbjct: 350 TYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM 409
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT----------- 326
K + P+ VTY+ I G CK G A + M + G PN Y +
Sbjct: 410 HHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKD 469
Query: 327 ------------MVYFMCKGGDYETA 340
++ +C+ G E A
Sbjct: 470 QGIQPNMHTDTILIKGLCQSGKLEAA 495
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D +Y +I C+ ++ +A +L +D K ++ NA + ++ G K++ D
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M + V Y+ I + K +A L ++M+ + +KP+ T++ + G
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK+G ++AK +M + PN S + T+V CK + + +G PN
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T SL+ G +V++AK++ + ++ T NV ++N + G
Sbjct: 348 VVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMING 392
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 41/316 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKP 179
+N + AV F + + FN +L +L +K Y V + +EF GI P
Sbjct: 45 HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFE---GINP 101
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF-YKEEKYEDVN-- 236
+ T+N +I FC+ A+S+LA++ + +P+ + + GF K + ++ +N
Sbjct: 102 NFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFH 161
Query: 237 -----------------------------KVLQMMERYG---MKSGVSMYNVRIHSLCKL 264
LQ++ R ++ MYN I + K
Sbjct: 162 DKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKD 221
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A L EM++K + P+ VTYS I GF G ++A + M + P+ +
Sbjct: 222 KHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTF 281
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVK 383
+V CK G + A + + PN +T +LV G K+ E K + ++K
Sbjct: 282 NILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMK 341
Query: 384 EKFTKNVDTWNEIEAG 399
+ NV T+ + G
Sbjct: 342 QGIKPNVVTYCSLMDG 357
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
++ +V FN L+ + KE K VF K GIKP++ TY ++ +C + A
Sbjct: 309 IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQ-GIKPNVVTYCSLMDGYCLVKQVNKA 367
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
I M ++ + N S+ ++ GF K +K + K+ M + V YN I
Sbjct: 368 KKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDG 427
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSH-----------------------FIYGFC 297
LCK K + A L++EM +G PN +TY+ I G C
Sbjct: 428 LCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLC 487
Query: 298 KDGNFEEAKKFY 309
+ G E A+K +
Sbjct: 488 QSGKLEAARKVF 499
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDT 183
T A+R + M++ + V + +++ +L KD ++V + F F + GI P + T
Sbjct: 189 TSAAIRLLRSMEQGNCQPDVVVYTSIIDSL--CKD-RQVTQAFNLFSEMIHQGISPSIFT 245
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I A C + ++L EM I PN F +V KE K + + V+ MM
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G++ V YN + C + EA + D M+ KG P+ V+YS I G+CK E
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M L PN+ Y T+++ +C G + A+ E + +G +P+F + L+
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNVD 391
L ++ EA I L+K N+D
Sbjct: 426 DYLCKNRRLDEA---IALLKAIEGSNMD 450
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 6/289 (2%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
FH+ S+ N + A+ +F M S+ F LL+++T K Y V + +
Sbjct: 39 FHSKSL----NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++GI P++ T N +I +FC A+S+LA++ + +PN ++F L+ G E K
Sbjct: 95 -DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+V + M G + V Y I+ LCK+ + A LL M +P+ V Y+
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I CKD +A + M + G+SP+ Y ++++ +C +++ E +
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+PN ++V L KV EA +++ ++K NV T+N + G
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 322
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++ N+ E H EM K+ +V F+ ++ AL E V ++
Sbjct: 249 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV-VDMMIKR 307
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ TYN ++ C S+ A + M K P+ S+ L+ G+ K ++ E
Sbjct: 308 GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKA 367
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R + Y+ +H LC + + +A AL EM+++G P+ V+Y +
Sbjct: 368 MYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 427
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ +EA + + S + P+ +Y ++ MC+ G+ E A +KG PN
Sbjct: 428 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 487
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T ++ GL ++EA +L G +K K ++ N T+N I G
Sbjct: 488 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRG 532
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 140 KLRH--SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
KL H ++ FN L+ L + EV +F + G +P++ TY +I C+ +
Sbjct: 131 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE-GFQPNVVTYGTLINGLCKVGST 189
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
S+A +L M++ + +P+ + +++ K+ + + M G+ + YN
Sbjct: 190 SAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSL 249
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
IH+LC L + ALL+EM++ + PN V +S + CK+G EA +M G+
Sbjct: 250 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN Y ++ C + + A+ + KG+ P+ + +L+ G ++ +A
Sbjct: 310 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369
Query: 378 LI-GLVKEKFTKNVDTWNEIEAGL 400
L + +++ N T++ + GL
Sbjct: 370 LFEEMCRKELIPNTVTYSTLMHGL 393
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 36/271 (13%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +NAL+ + + E +VF + G PD+ +Y+ +I +C+ A +
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVF-DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 204 LAEMDRKSIKPNASSFGALVAGFY-----------------------------------K 228
EM RK + PN ++ L+ G K
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ ++ +L+ +E M + +Y + I +C+ + A+ L + SKG+ PN T
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I G C+ G EA K + M G SPN Y + + + + +E +
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
A+G+ + +T LV L+ K+++
Sbjct: 551 ARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 581
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 10/221 (4%)
Query: 60 EICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL 119
E+CR L P + + +S ++ L E+ TR + + F ++ I+L
Sbjct: 373 EMCRKE-LIPNT----VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD--FVSYCILL 425
Query: 120 --YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+ + A+ K ++ + + + ++ + A + + + +F + G+
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL-SSKGL 484
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P++ TY +I C+ + A + EM RK PN ++ + GF + + +
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 544
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+LQ M G + VS V + L K +L E L
Sbjct: 545 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
Query: 163 EVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
E+++V I+ + G+KP+L TYN +I C+S A +L EM + I P+ +
Sbjct: 25 ELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYT 84
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ GF K + K+ ME+ + Y I LC+ K EA + ++M S+
Sbjct: 85 TLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSR 144
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++P+ VTY+ I G+CK G E+A + M SGL+PN Y + +CK G +TA
Sbjct: 145 GVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTA 204
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E KG N T SLV GL + + +A +L+
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ +Y+ VI +C + ++ EM K +KPN ++ +++ K K +D
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL+ M G+ +Y I CKL A L DEM + + P+ + Y+ I G
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G EA K + M + G+ P+ Y T++ CK G+ E A + + G PN
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L GL +V A EL+ + + N+ T+N + GL
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGL 230
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++S IN + + ++E++ + N + I+L ++ + A R
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + + L+ + + ++F E K I PD Y VI C
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR-IVPDFIAYTAVICGLCR 127
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A + +M + ++P+ ++ L+ G+ K + E + M + G+ V
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y LCKL + A LL EM KG++ N TY+ + G CK GN +A K M
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+G+ P++ + T++ CK G+ A +E + +G P T L+ G + +
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307
Query: 374 EAKELIGLVKEK-FTKNVDTWNEI 396
+ + L+ + EK N T+N +
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSL 331
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 1/279 (0%)
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+K R D + ++ I Y + ++ +EM L+ ++ +N+++L L +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ +RV E GI PD Y +I FC+ + +AY + EM+++ I P+ ++
Sbjct: 61 VDDAERVLREMINQ-GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
A++ G + K + +KV M G++ Y I CK + +A +L ++M+
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+ PN VTY+ G CK G + A + M GL N Y ++V +CK G+ A
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ +E G P+ T +L+ ++ +A EL+
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 1/237 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F EM++ ++ A+ A++ L E +VF + + G++PD TY
Sbjct: 97 QAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMF-SRGVEPDEVTYTT 155
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+S + A+S+ +M + + PN ++ AL G K + + N++L M G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ + YN ++ LCK +A L++EM GM P+++T++ + +CK G +A
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ R M + GL P + ++ C G E + KG +PN TT SL+
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 1/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +A++ I L + ++ +R +E + I Y ++ E A
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + L +V + AL L + E G++ ++ TYN ++ C+
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGK-GLQLNICTYNSLVNGLCK 232
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + A ++ EM+ + P+ +F L+ + K + +++L+ M G++ V
Sbjct: 233 SGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NV ++ C + + LL ML KG+ PN+ TY+ + +C N + Y+ M
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G+ P+S+ Y ++ CK + + A KE KG+ ++ S++ G K+S
Sbjct: 353 ARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKIS 412
Query: 374 EAKEL 378
EA+EL
Sbjct: 413 EAREL 417
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 36/249 (14%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM L+ ++ +N+L+ L + + ++ ++ E + G+ PD T+ ++ A+C++
Sbjct: 210 EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM-EVAGMYPDTITFTTLMDAYCKT 268
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A+ +L EM + ++P +F L+ GF ED ++L M G+ + Y
Sbjct: 269 GEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTY 328
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA--------- 305
N + C + M ++G+ P+S TY+ I G CK N +EA
Sbjct: 329 NSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388
Query: 306 --------------------------KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
++ + M G++ ++ +Y V G+ ET
Sbjct: 389 KGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMET 448
Query: 340 ALGFCKESI 348
AL C E+I
Sbjct: 449 ALELCDEAI 457
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDT 183
T A+R + M++ + V + +++ +L KD ++V + F F + GI P + T
Sbjct: 180 TSAAIRLLRSMEQGNCQPDVVVYTSIIDSL--CKD-RQVTQAFNLFSEMIHQGISPSIFT 236
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I A C + ++L EM I PN F +V KE K + + V+ MM
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G++ V YN + C + EA + D M+ KG P+ V+YS I G+CK E
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M L PN+ Y T+++ +C G + A+ E + +G +P+F + L+
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNVD 391
L ++ EA I L+K N+D
Sbjct: 417 DYLCKNRRLDEA---IALLKAIEGSNMD 441
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 6/289 (2%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
FH+ S+ N + A+ +F M S+ F LL+++T K Y V + +
Sbjct: 30 FHSKSL----NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++GI P++ T N +I +FC A+S+LA++ + +PN ++F L+ G E K
Sbjct: 86 -DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+V + M G + V Y I+ LCK+ + A LL M +P+ V Y+
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I CKD +A + M + G+SP+ Y ++++ +C +++ E +
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+PN ++V L KV EA +++ ++K NV T+N + G
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 313
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++ N+ E H EM K+ +V F+ ++ AL E V ++
Sbjct: 240 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV-VDMMIKR 298
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ TYN ++ C S+ A + M K P+ S+ L+ G+ K ++ E
Sbjct: 299 GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKA 358
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R + Y+ +H LC + + +A AL EM+++G P+ V+Y +
Sbjct: 359 MYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 418
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ +EA + + S + P+ +Y ++ MC+ G+ E A +KG PN
Sbjct: 419 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 478
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T ++ GL ++EA +L G +K K ++ N T+N I G
Sbjct: 479 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRG 523
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 140 KLRH--SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
KL H ++ FN L+ L + EV +F + G +P++ TY +I C+ +
Sbjct: 122 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE-GFQPNVVTYGTLINGLCKVGST 180
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
S+A +L M++ + +P+ + +++ K+ + + M G+ + YN
Sbjct: 181 SAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSL 240
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
IH+LC L + ALL+EM++ + PN V +S + CK+G EA +M G+
Sbjct: 241 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN Y ++ C + + A+ + KG+ P+ + +L+ G ++ +A
Sbjct: 301 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360
Query: 378 LI-GLVKEKFTKNVDTWNEIEAGL 400
L + +++ N T++ + GL
Sbjct: 361 LFEEMCRKELIPNTVTYSTLMHGL 384
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 36/271 (13%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +NAL+ + + E +VF + G PD+ +Y+ +I +C+ A +
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVF-DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 204 LAEMDRKSIKPNASSFGALVAGFY-----------------------------------K 228
EM RK + PN ++ L+ G K
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ ++ +L+ +E M + +Y + I +C+ + A+ L + SKG+ PN T
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I G C+ G EA K + M G SPN Y + + + + +E +
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
A+G+ + +T LV L+ K+++
Sbjct: 542 ARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 572
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 10/221 (4%)
Query: 60 EICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL 119
E+CR L P + + +S ++ L E+ TR + + F ++ I+L
Sbjct: 364 EMCRKE-LIPNT----VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD--FVSYCILL 416
Query: 120 --YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+ + A+ K ++ + + + ++ + A + + + +F + G+
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL-SSKGL 475
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P++ TY +I C+ + A + EM RK PN ++ + GF + + +
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 535
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+LQ M G + VS V + L K +L E L
Sbjct: 536 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
EH TF + + R + N LL L AK E + ++ G PD+ +YN
Sbjct: 111 EHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNT 170
Query: 187 VIKAFCESSDSSSAYSIL---AEMDRKSIKPNASSFGALVAGFYKEEKYEDV-NKVLQMM 242
++K FC + A +L A+ +S PN S+ ++ GF+ E + + N L+MM
Sbjct: 171 LLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM 230
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+R G++ V Y I LCK + A+ + +M+ KG+KP++ TY+ I+G+ G +
Sbjct: 231 DR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+E + MS GL P+ Y +++ ++C G A I KG PN L
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349
Query: 363 VTGLAGASKVSEAKELIGLVKE 384
+ G A +SE +L+ L+ E
Sbjct: 350 IHGYATKGALSEMHDLLNLMVE 371
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA-LTIAKDYKEVKRVFIEFPKTYGIKPD 180
+A + + A F++M + ++ +N L+ L+I K +KEV R+ E +G+KPD
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEM-SAHGLKPD 307
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY ++ C + A + M RK IKPN + +G L+ G+ + +++ +L
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN 367
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+M G+ ++N+ + K EA + ++M +G+ P+ V Y I CK G
Sbjct: 368 LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++A + M N G++PN V+ ++VY +C +E A F E + +G P+
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTK 388
+++ L +V +A+ LI L++ T+
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTR 515
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E+ L FN + A E +F + K G+ PD+ Y +I A C+
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNYGALIDALCKLG 427
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +M + + PN F +LV G +K+E + M G++ V +N
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LC + +A+ L+D M G +P ++Y+ I G C G +EA K +M +
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y T+++ C+ G + A G +E + G P T +++ GL + SEA
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 376 KEL-IGLVKEKFTKNVDTWNEIEAGLPQ 402
KEL + ++ N+ +N I GL +
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSK 635
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P++ TY VI C++ A + +M K +KP+ ++ L+ G+ K+++V
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ M +G+K Y ++ LC +C EA+ L D M+ KG+KPN Y I+G
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHG 352
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G E +M +GLSP+ ++ + K + A+ + +G P+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 356 FTTMKSLVTGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEIEAGL 400
+L+ L +V +A + ++ E N+ +N + GL
Sbjct: 413 VVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 17/356 (4%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINK--LSEA-NYFNGISQYLEELKTRPDLQN 109
S +L + L+P+ H+ + F+ K + EA + FN + Q PD+ N
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ----GLSPDVVN 415
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
++ G+ + AV F +M + ++ FN+L+ L +++ K +
Sbjct: 416 YGALIDALCKLGR---VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E GI+PD+ +N ++ C A ++ M+R +P S+ L+ G
Sbjct: 473 EMLNQ-GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV 531
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ ++ K L +M G+K YN +H C+ + +A + EML G+ P VTY
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
S ++G F EAK+ Y M SG N +Y ++ + K + A + +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
K + TT ++ L + + +A L GLV + FT + N IE G
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 36/208 (17%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+KPD TYN ++ +C + AY + EM R I P ++ ++ G + ++
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK------------- 280
+ ++ M G + + +YN+ ++ L K EA L + SK
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI 665
Query: 281 ----------------------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
G+ P+ TY ++G EE + M SG +
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 319 PNSSVYFTMVYFMCKGGDYETALGF-CK 345
PNS + +V + GD A + CK
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLCK 753
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 76/189 (40%), Gaps = 1/189 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A F+EM + + V ++ +L L + + E K +++ T G +
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI-TSGKQW 621
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN ++ +++ A+ + + K + ++F ++ +K + ED +
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ YG+ V Y + +L + E L M G PNS + +
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHR 741
Query: 300 GNFEEAKKF 308
G+ A +
Sbjct: 742 GDITRAGAY 750
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A + F EM L ++N L+ A E VF E + G+ PD+
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK-GVVPDV 295
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+ +I A C + + A +++ +M + ++ N +F AL+ GF + +D ++
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN---------------- 285
M ++ V YNV I+ CKL + EA+ L+ EM +KGMKP+
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 286 -------------------SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
++TYS I G C++ +A + + M GL P+ Y T
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT 475
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ CK G+ + AL E I KG +P+ T L+ GL+ +++ EA+ L+
Sbjct: 476 LIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 116/225 (51%), Gaps = 3/225 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ A+NA+LLAL+ A +R+ + G+ P++ TYN +++A C A +
Sbjct: 119 SLLAYNAVLLALSDAS-LPSARRLLASMLRD-GVAPNVYTYNILVRALCARGQREEALGV 176
Query: 204 LA-EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ +M PN ++ LVA F + + + +++ +M G++ + +N ++ LC
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K + +A+ + DEM +G+ P+ V+Y+ + G+CK G EA + M+ G+ P+
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ ++++ MC+ G+ E A+ + +G N T +L+ G
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 1/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M + +V +N L+ AL +E V + + G P++ TYN ++
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AFC + + +A ++ M ++P+ +F +V G K + ED K+ M R G+
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + CK EA A+ EM KG+ P+ VT++ I+ C+ GN E A
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL N + ++ C+ G + AL KE P+ L+ G
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
++ EA+ELI ++ K K +V T++ I +G
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSG 409
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY-KEEKYED 234
G P L YN V+ A ++S SA +LA M R + PN ++ LV + ++ E
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ V M G V YN + + C+ + A+ L+ M G++P+ VT++ +
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK G E+A+K + M+ GL+P+ Y T+V CK G AL E KG VP
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ T SL+ + A + A L+G ++E+
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRER 324
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD TY+ +I+ CE A + +M + ++P+ ++ L+ G KE +
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY- 294
+ M + G+ V Y+V I L K + EA+ LL ++ + P+++ Y ++
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC 549
Query: 295 --------------GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
GF G +A K Y+ M + + SVY +++ C+GG+ A
Sbjct: 550 CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKA 609
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
L F K+ + G+ PN T+ SLV GL EA +I
Sbjct: 610 LSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVI 648
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G P+ + Y+ + D + A++ M G++PN Y +V +C G E A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 341 LGFCKESI-AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEA 398
LG + + G PN T +LV A +V A+ L+G+++E + ++ T+N +
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 399 GL 400
GL
Sbjct: 234 GL 235
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 114/295 (38%), Gaps = 63/295 (21%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM--TEHAV 130
+ +++ IN + + + + E++ + PD+ +S IL G + T+ A
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVT-----YSTILSGYCKIGDTDSAF 420
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++M + + +++L+ L + + +F E G++PD TY +I
Sbjct: 421 ELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF-EKMLQLGLQPDEFTYTTLIDG 479
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK------------YED---- 234
C+ + A S+ EM +K + P+ ++ L+ G K + YED
Sbjct: 480 HCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPD 539
Query: 235 ----------------------------------VNKVLQ-MMERYGMKSGVSMYNVRIH 259
+KV Q M++R+ G S+Y+V IH
Sbjct: 540 NIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDG-SVYSVLIH 598
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
C+ +A + ++L G PNS + + G ++G EA + + N
Sbjct: 599 GHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLN 653
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 154/325 (47%), Gaps = 22/325 (6%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHK 140
I+ LS ++ F+ + E K + L F A+S+I +G M E + ++ M E
Sbjct: 162 IDVLSLSSDFDRVRCIFGEFKEKGFLMT-VFAANSLIRSFGALGMVEELLWVWRRMKESG 220
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+ S+ FN LL L + + +RVF E + I PD+ +YN +IK +C++ ++ A
Sbjct: 221 IEPSLYTFNFLLNGLVNSMFIESAERVF-EVMECGKIGPDVVSYNTMIKGYCKAGNTKKA 279
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+M++++++P+ ++ L+ Y E ++ + Q ME G++ Y++ I
Sbjct: 280 MEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGG 339
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK + E ++ + M KG K N Y+ I + K+GN EA + M G P+
Sbjct: 340 LCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPD 399
Query: 321 SSVYFTMVYFMCKGGDYETAL---GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
Y +V +CK G + A+ FCK++ N SL+ GL A +V EA
Sbjct: 400 DVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEV---AVNAMFYSSLIDGLGKAGRVDEA-- 454
Query: 378 LIGLVKEKFTKNVDTWNEIEAGLPQ 402
EKF + + +E G PQ
Sbjct: 455 ------EKFFEEM-----VERGCPQ 468
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 4/268 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
HA+S+++ G + T F+ M++ + +V + AL+ A + E +F E
Sbjct: 331 HAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLF-E 389
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G +PD TY ++ C+S A + NA + +L+ G K
Sbjct: 390 RMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAG 449
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ K + M G YN I +L K K EA L M +G TY+
Sbjct: 450 RVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYT 509
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G K+ EEA K + +M + G++P ++ + + +C G A E
Sbjct: 510 ILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPM 569
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G +P T + ++ L A + +A +L
Sbjct: 570 GVIPE-TAFEDMINVLCKAGRTEQACKL 596
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 140/326 (42%), Gaps = 9/326 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E++ E+ + P D ++++ I +A + +++ R +L+ ++
Sbjct: 245 ERVFEVMECGKIGP----DVVSYNTMIKGYCKAGNTKKAMEKFTDMEKR-NLEPDKITYL 299
Query: 116 SII--LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
++I Y + N + + ++EM+E L A++ ++ L E VF K
Sbjct: 300 TLIQACYSEGNF-DSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNK 358
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G K ++ Y +I A+ ++ + + A ++ M + +P+ ++G +V G K + +
Sbjct: 359 K-GCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLD 417
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + + + Y+ I L K + EA+ +EM+ +G +S Y+ I
Sbjct: 418 EAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALI 477
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
K G EEA ++ M G Y ++ + K E AL I KG
Sbjct: 478 DALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGIT 537
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
P + ++L GL + KV+ A +++
Sbjct: 538 PTTASFRALSVGLCLSGKVARACKIL 563
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 37/279 (13%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + + +N L ++ + +Y E K N F++ I G+A + A + F
Sbjct: 399 DDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFF 458
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM E G D YN +I A +
Sbjct: 459 EEMVER------------------------------------GCPQDSYCYNALIDALAK 482
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A + M+++ ++ L++G +KE + E+ K+ +M G+ +
Sbjct: 483 SGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTAS 542
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+ LC K A A +LDE+ G+ P + + I CK G E+A K +
Sbjct: 543 FRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIV 601
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G V ++ + K G+ + A+ I G+
Sbjct: 602 DRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGY 640
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
++ Y +I SSD I E K + +L+ F E++ V +
Sbjct: 155 IECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWR 214
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M+ G++ + +N ++ L A+ + + M + P+ V+Y+ I G+CK G
Sbjct: 215 RMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAG 274
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
N ++A + + M L P+ Y T++ G++++ L +E +G
Sbjct: 275 NTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERG 325
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 10/303 (3%)
Query: 102 KTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFN-ALLLALTIA 158
+ +PDL H I++ +A M E A F EM A + A++ L A
Sbjct: 184 RCKPDL-----HTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKA 238
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
K KE + VF + K G PD YN +I ++ + A +L M K+ P +
Sbjct: 239 KRVKEAREVFGQMEKC-GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+G LV K E ++ ++M G + +Y IH K + EA +L DEM+
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G +P+ +T++ I G CK GNFE+A K + M G PN Y T++ + K G
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIE 397
A K IA G P+ T L+ G ++ EA +L+ L K + N+ ++ +
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477
Query: 398 AGL 400
GL
Sbjct: 478 KGL 480
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + + AV F+ M + + + F L+ L A ++ VF E + P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D + +++ ++ A + +M++ P+A ++ ++ G K ++ KVL
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 240 Q-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M+ + + + V+ Y + ++SLCK A+ L M + G +PNSV Y+ I+GF K
Sbjct: 284 DNMLAKACVPTEVT-YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G +EA + M +G P+ + M+ +CK G++E A +E + G PN T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Query: 359 MKSLVTGLAGASKVSEA 375
+++ GL+ +V+ A
Sbjct: 403 YTTIIQGLSKIGRVANA 419
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 6/229 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ Y +I F +S A S+ EM +P+ + ++ G K +E
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K + M R G K V Y I L K+ + A A ++ M++ G P+SVTY + G
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE---SIAKGW 352
FCK G +EA + + SPN +Y ++V +C GG E L E + A+
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
P S++ GL ++ EA + +V E + T+N + GL
Sbjct: 505 DPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 39/272 (14%)
Query: 146 GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS--SSAYSI 203
G ++++ L E R+F + G KPD TYN +I C S ++ A+++
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRM-VSEGCKPDATTYNILINGLCRSRENRVERAFAL 565
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +++ P+A ++ L G K + + K+L+ G + V Y LC
Sbjct: 566 LHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY 625
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ A +L EM+ +G P++ Y I G K E+A KF+ M G P +
Sbjct: 626 QGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVAT 685
Query: 324 YFTMVYFMCKGGDYETAL------------------------GFCK------------ES 347
Y +V +C G+ + A GFCK +
Sbjct: 686 YTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
I++G VP T SL GL + K +A+EL+
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 14/271 (5%)
Query: 122 QANMTEHAVRTFKEM-------DEHKLRHSVGAFNALLLALTIAKDYKEVK------RVF 168
+A++ V T K++ H +R+ +G + +L +A + +K F
Sbjct: 47 RADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFF 106
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ G + D+ TYN ++ + S Y+I EM + I PN SF L+ F +
Sbjct: 107 RWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFAR 166
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSV 287
+ +D ++M+R K + + + + LCK +A + EM++ G + P+
Sbjct: 167 TRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRA 226
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ + K +EA++ + M G P++ Y TM+ + K G + AL
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+AK VP T LV L A + A+EL
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 134/351 (38%), Gaps = 89/351 (25%)
Query: 104 RPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT----I 157
RPD+ H++++ G ++ E A ++F+EM + +V + ++ L+ +
Sbjct: 362 RPDVIT-----HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A ++ +K + +G PD TY ++ FC+ A +L E+D+ S PN
Sbjct: 417 ANAFRIMKGMI-----AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471
Query: 218 SFGALV------------------------------------AGFYKEEKYEDVNKVLQM 241
+ +LV G K + ++ ++ Q
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQR 531
Query: 242 MERYGMKSGVSMYNVRIHSLCKLR--KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK- 298
M G K + YN+ I+ LC+ R + A ALL ++ G P++VTY+ G CK
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591
Query: 299 ----------------------------------DGNFEEAKKFYRIMSNSGLSPNSSVY 324
G + A ++ M G +P+++ Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ + KG E A F E I KG P T +LV L A V EA
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 6/225 (2%)
Query: 163 EVKRV--FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
EV R +E + G D+ Y + C A S+ EM R+ P+A+++
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ G K +K ED K M G K V+ Y + +LC EA + ML++
Sbjct: 653 CIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLAR 712
Query: 281 GMKPNSV-TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G SV Y I+GFCK + A K + M + G P + ++ + + G E
Sbjct: 713 GELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK 772
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
A +E A G P+ T +++ GL K E+ +L+ LV+E
Sbjct: 773 AQELLQEMAAGGSPPHAATFTAILDGL---RKSDESGKLLKLVQE 814
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E+ G + V YN ++ L + ++ A+ +EML G+ PN+ +++ I F +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS- 361
++A + IM P+ + +V +CK G E A E +A G+VP + +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+V L A +V EA+E+ G + K F + +N + GL +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK 272
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 109/211 (51%), Gaps = 2/211 (0%)
Query: 175 YGI--KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
YGI KP + +Y+ +I A C+ A + EM + + P S+ +L+ GF K+
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKW 293
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ ++ M G++ V +NV I LCK K EAK LL+ M+ +G+ PN +TY+
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFC G+ A++ + M + G P+ Y ++ CK E A+ + G
Sbjct: 354 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
P+ T +L+TGL KV +AK+L G++K
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N+L+ + D + +F+ P + G +PD+ Y +I +C++S A +
Sbjct: 349 TYNSLIEGFCLVGDLNSARELFVSMP-SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 407
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + +P+ ++GAL+ G ++ K D K+ +M+ YG+ + +Y + ++ LCK
Sbjct: 408 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 467
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L +++ S +K + ++ I G CK G E A + + + L P+ Y
Sbjct: 468 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 527
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
M++ C+GG A ++ G P+ T +L+ G + K+ + EL+ ++ ++
Sbjct: 528 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 8/262 (3%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
+ +F LL L K Y +V ++ + + GI PD T N ++ C + +++
Sbjct: 96 LSSFTHLLSGLAKIKHYSQVFYLYNQM-RLSGISPDCCTLNILLNCLCNVNRVGEGLAVM 154
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
A + R+ P+ ++ L+ G E + + M++ G Y + LC+
Sbjct: 155 AGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRT 214
Query: 265 RKCAEAKALLDEMLSK------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ A L EML+ KP ++YS I CKD +EA+ + M G++
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P Y ++++ C GG +E A E + +G PN T L+ L KV EAK+L
Sbjct: 275 PTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334
Query: 379 IG-LVKEKFTKNVDTWNEIEAG 399
+ +++ N+ T+N + G
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEG 356
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 37/286 (12%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +++ ++ AL + E + +F E K G+ P + +Y +I FC A +
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
EM + ++PN +F L+ KE K + +L++M + G+ + YN I C +
Sbjct: 301 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV 360
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
A+ L M SKG +P+ + Y+ I G+CK EEA K Y M G P+ Y
Sbjct: 361 GDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTY 420
Query: 325 FTMVYFMCKGGDYETAL-----------------------GFCKESIAKGWVPNFTTMKS 361
++ + +GG A G CK + F +KS
Sbjct: 421 GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS 480
Query: 362 ------------LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
L+ GL A K+ A EL L +E+ +V T+N
Sbjct: 481 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN 526
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + E A++ + M + R V + ALL L + K++F K YGI
Sbjct: 392 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF-GVMKVYGIPG 450
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL Y + C++ A + ++ +IK + F L+ G K K E ++
Sbjct: 451 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 510
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ + + ++ V YN+ IH C+ + +A L +M G P+ +TY+ I GF +
Sbjct: 511 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 570
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSV 323
E+ + +M +S + ++
Sbjct: 571 KKLEKVVELLHMMVQRDVSLDVNI 594
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 42/240 (17%)
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
++ A+ M + P SSF L++G K + Y V + M G+ N+
Sbjct: 77 ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
++ LC + + E A++ +L +G P+ VTY+ I G C + +A + M G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196
Query: 317 LSPNSSVYFTMVYFMCKGGDYETAL-----------------------------GFCK-- 345
+PN+ Y T++ +C+ G+ AL CK
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256
Query: 346 ----------ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
E +G P + SL+ G K EAK L +V + NV T+N
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFN 316
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ P +++H + G K ++ + Y M SG+SP+ ++ +C
Sbjct: 87 MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNE 395
L + +G++P+ T +L+ GL ++S+A L + K T N T+
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206
Query: 396 IEAGL 400
+ GL
Sbjct: 207 LMKGL 211
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 7/320 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
++ I IN L + LEE+ + N +A II + + A ++M
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + + +N+L+ L+ +E + + + K G+ PD TY+ +I +C++ +
Sbjct: 515 TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKR-GLVPDEFTYSGLIHGYCKTGN 573
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A +L +M +KPNA ++ L+ G++K YE V+ +LQ M G K +Y +
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I +L + A +L E+ G+ P+ YS I G CK + E+A M+ G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA- 375
L P Y ++ C+ GD A +AKG VPN T +L+ G +++A
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAF 753
Query: 376 ---KELI--GLVKEKFTKNV 390
KE++ G+ + F NV
Sbjct: 754 DLYKEMLDRGIAPDAFVYNV 773
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 5/262 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+EM + +N ++ L + +E F E YG+ PD TY
Sbjct: 260 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FKEEMVDYGLSPDAFTYGA 318
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ S A ++L EM +KPN +G LV GF KE K + +L+ M G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ MY+ I LCK+ + A LL EM+ G++P++ TY+ + G + + + A
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M NSG+ PN Y M+ +C+ G+ + A +E I++G PN L+ G
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498
Query: 367 AGASKVSEAKELIGLVKEKFTK 388
+ +S A E + EK TK
Sbjct: 499 SKEGNISLACEAL----EKMTK 516
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 151/348 (43%), Gaps = 35/348 (10%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D ++ I LS +Y +++ R + +E ++ I Y + E A +
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
++M L+ + + LL + DY++V + + G KPD Y VI+
Sbjct: 580 LLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGS-GDKPDNHIYGIVIRNL 638
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
S + A+ +L E+++ + P+ + +L++G K E +L M + G++ G+
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGI 698
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I C+ + A+ + D +L+KG+ PN VTY+ I G CK+G+ +A Y+
Sbjct: 699 VCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758
Query: 312 MSNSGLSP----------------------------------NSSVYFTMVYFMCKGGDY 337
M + G++P N S++ T+V+ CK G
Sbjct: 759 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKL 818
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + + VPN T++ +V+ A K+ EA + +++K
Sbjct: 819 QETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 1/246 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + +A + M + L + N LL L A D E+ F + GI P
Sbjct: 183 YKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA-DAMELLWKLKGFMEGAGILP 241
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ I+A C++ D +A + EM R+ N ++ +++G + E+
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M YG+ Y ++ LCK + EAKALLDEM G+KPN V Y + GF K+
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA + M ++G+ PN +Y ++ +CK G A KE I G P+ T
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Query: 360 KSLVTG 365
L+ G
Sbjct: 422 NPLMQG 427
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 7/320 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S I +A F+ + EE++ R NE + I ++ E A
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM ++ L + AL+ L KE K + E G+KP++ Y ++ F +
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM-SCSGLKPNIVVYGTLVDGFMK 360
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++ A+ IL EM ++PN + L+ G K + +K+L+ M + G++
Sbjct: 361 EGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + + A LL+EM + G+ PN +Y I G C++G +EA M
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL PN+ +Y ++ K G+ A ++ P+ SL+ GL+ ++
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRME 540
Query: 374 EAKELI------GLVKEKFT 387
EA+E GLV ++FT
Sbjct: 541 EAEEYYAQVQKRGLVPDEFT 560
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + KEM + LR +N L+ D + E + GI P++ +Y +I
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM-RNSGILPNVYSYGIMI 460
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ +S A ++L EM + +KPNA + L+ G KE + L+ M + +
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH 520
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I L + + EA+ ++ +G+ P+ TYS I+G+CK GN E+A +
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQL 580
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
R M NSGL PN+ Y ++ K DYE + + G P+
Sbjct: 581 LRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD 627
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 6/220 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P N ++K + + + M+ I P+ ++ + K ++
Sbjct: 203 GLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAA 262
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV + M R YNV I LC+ EA +EM+ G+ P++ TY + G
Sbjct: 263 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 322
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK +EAK MS SGL PN VY T+V K G A KE I+ G PN
Sbjct: 323 LCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPN 382
Query: 356 FTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFTKN 389
+L+ GL ++ A +L +GL + FT N
Sbjct: 383 KIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYN 422
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHA 114
IL+ + P++H+ + I I LS + L E++ PDL H
Sbjct: 615 ILQSMLGSGDKPDNHI----YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL-----HI 665
Query: 115 HSIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++ G + E AV EM + L + +NAL+ + D + VF
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI- 724
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ P+ TY +I C++ D + A+ + EM + I P+A + L G
Sbjct: 725 LAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADL 784
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + + M G + VS++N +H CK K E + LL M+ + + PN+ T
Sbjct: 785 EQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKV 843
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
+ F K G EA + + + S +++ F++++
Sbjct: 844 VSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLF 880
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + ++ + ++ +A ++ M + P L+ + + E + K+
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
ME G+ V Y+ I + CK R AK + +EM + N VTY+ I G C+
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EEA F M + GLSP++ Y ++ +CKG + A E G PN
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 359 MKSLVTGLAGASKVSEAKELI 379
+LV G K +EA +++
Sbjct: 351 YGTLVDGFMKEGKTAEAFDIL 371
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
L LK++ N +L A A + + + I +L + + L+++K
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
E I Y + E A++ F + E + +V +N LL AL ++ +
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMI 163
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
++ K G+ P++ TYN ++KA C++ +A+ + EM K P+A ++ +V+
Sbjct: 164 NPLYTNMKKD-GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVS 222
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
K K +D ++ R+ K V +YN I +CK + A LL EM+ G+ P
Sbjct: 223 SLCKAGKIDDAR---ELAGRF--KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Query: 285 NSVTYSHFIYGFCKDGNFE-----------------------------------EAKKFY 309
N V+YS I C GN E EA +
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
++M G PN Y T+++ +C G E AL C + G +PN TT L+ G A +
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 370 SKVSEAKE 377
+ A E
Sbjct: 398 GDLVGASE 405
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+ + SV +NAL+ + + ++ E G+ P++ +Y+ +I + C S +
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN-GVDPNVVSYSCIINSLCVSGNVEL 297
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A+++ A+M + N +F L+ G + K + + ++M + G + V YN IH
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC EA + D+M G PN TYS I GF K G+ A + + M + G P
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N Y MV +CK ++ A ++ +G PN T + + GL G +V A +L+
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477
Query: 380 GLVK-EKFTKNVDTWNEI 396
++ N+ T+NE+
Sbjct: 478 ERMQGHGCLPNITTYNEL 495
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++G +P++ TY ++ C++S A S++ +M + PN +F + G + E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
K+L+ M+ +G ++ YN + +L ++ K EA L E+ ++ ++PN VTY+ +
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-SIAKGW 352
YGF + G EA + + G +P+S Y TM++ CK G + A + S K W
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
P+ T SL+ G + EA + + + N TWN +
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ YN +I C + A + +M R PN +++ L+ GF K
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M +G + V Y + LCK +A +L+++M +G PN++T++ FI G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G E A K M G PN + Y ++ + + YE A G +E A+ PN
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG 380
T +++ G + A + EA +L G
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFG 548
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 2/289 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+A++ I+ L Q ++++ L N ++ I + ++ A T+
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M H R +V + ++ L + + + +E G P+ T+N IK C +
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSL-VEKMTLEGCTPNTMTFNTFIKGLCGNG 468
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L M PN +++ L+ ++ KYE+ + Q +E ++ + YN
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSN 314
++ + EA L + L +G P+S+TY+ I+ +CK G + A + R+ S
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
P+ Y ++++ C + E A+ F ++I +G PNF T +LV
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTY 184
E A++ EM ++ + +V +++ ++ +L ++ + V+ F F + + G ++ T+
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN---VELAFALFAQMFLRGCDANIHTF 317
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+IK A + M + +PN ++ L+ G E+ +V M+R
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR 377
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V+ Y++ I K A + M+S G +PN VTY+ + CK+ F++
Sbjct: 378 SGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQ 437
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M+ G +PN+ + T + +C G E A+ + G +PN TT L+
Sbjct: 438 ANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLD 497
Query: 365 GLAGASKVSEAKELIGLVKE----KFTKNVDTWNEIEAGL 400
L +K EA GL +E N+ T+N + G
Sbjct: 498 ALFRMNKYEEA---FGLFQEIEARNLQPNLVTYNTVLYGF 534
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 6/227 (2%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G KP + YN ++ A + + M + + PN ++ L+ K ++ +
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+K+ M G Y + SLCK K +A+ L + KP+ Y+ I
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALID 252
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G E A K M ++G+ PN Y ++ +C G+ E A + +G
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
N T L+ G K+ EA +L L +++ NV +N + GL
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 5/198 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I+ + IL +M I F ++ G+ + E K+ +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+G K V +YN + +L K L M G+ PN TY+ + CK+
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ A K + MSN G P++ Y TMV +CK G + A +A + P+ +L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA-----RELAGRFKPSVPVYNAL 250
Query: 363 VTGLAGASKVSEAKELIG 380
+ G+ ++ A +L+G
Sbjct: 251 IDGMCKEGRIEVAIKLLG 268
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
AS++ ++ +E + + V +LQ M+ G+ ++ I+ ++ +A +
Sbjct: 74 ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ G KP Y+H + + F+ Y M GL PN Y ++ +CK
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNE 395
+ A E KG P+ T ++V+ L A K+ +A+EL G +F +V +N
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG----RFKPSVPVYNA 249
Query: 396 IEAGL 400
+ G+
Sbjct: 250 LIDGM 254
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A++ + M H ++ +N LL AL Y+E +F E + ++P+L TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-EARNLQPNLVTYN 528
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ F + A + + + P++ ++ ++ + K+ K V Q++ER
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK---VKIAAQLVERV 585
Query: 246 G-MK---SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
MK + Y I C EA A LD+ +++G+ PN T++ + F
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 139/309 (44%), Gaps = 10/309 (3%)
Query: 96 QYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFN-ALL 152
+ ++ + +PDL H I++ +A M E A F EM A + A++
Sbjct: 178 EIMKRKRCKPDL-----HTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
L AK KE + VF + K G PD YN +I ++ + A +L M K+
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKC-GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P ++G LV K E ++ ++M G + +Y IH K + EA +
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L DEM+ G +P+ +T++ I G CK GNFE+A K + M G PN Y T++ +
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVD 391
K G A K IA G P+ T L+ G ++ EA +L+ L K + N+
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471
Query: 392 TWNEIEAGL 400
++ + GL
Sbjct: 472 LYSSLVNGL 480
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + + AV F+ M + + + F L+ L A ++ VF E + P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D + +++ ++ A + +M++ P+A ++ ++ G K ++ KVL
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 240 Q-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M+ + + + V+ Y + ++SLCK A+ L M + G +PNSV Y+ I+GF K
Sbjct: 284 DNMLAKACVPTEVT-YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G +EA + M +G P+ + M+ +CK G++E A +E + G PN T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Query: 359 MKSLVTGLAGASKVSEA 375
+++ GL+ +V+ A
Sbjct: 403 YTTIIQGLSKIGRVANA 419
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ Y +I F +S A S+ EM +P+ + ++ G K +E
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K + M R G K V Y I L K+ + A A ++ M++ G P+SVTY + G
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL-GFCKESIAKGWVP 354
FCK G +EA + + SPN +Y ++V +C GG E L ++S A
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ S++ GL ++ EA + +V E + T+N + GL
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 39/272 (14%)
Query: 146 GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS--SSAYSI 203
G ++++ L E R+F + G KPD TYN +I C S ++ A+++
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRM-VSEGCKPDATTYNILINGLCRSRENRVERAFAL 565
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L ++++ P+A ++ L G K + + K+L+ G + V Y LC
Sbjct: 566 LHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY 625
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ A +L EM+ +G P++ Y I G K E+A KF+ M G P +
Sbjct: 626 QGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVAT 685
Query: 324 YFTMVYFMCKGGDYETAL------------------------GFCK------------ES 347
Y +V +C G+ + A GFCK +
Sbjct: 686 YTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
I++G VP T SL GL + K +A+EL+
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 14/271 (5%)
Query: 122 QANMTEHAVRTFKEM-------DEHKLRHSVGAFNALLLALTIAKDYKEVK------RVF 168
+A++ V T K++ H +R+ +G + +L +A + +K F
Sbjct: 47 RADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFF 106
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ G + D+ TYN ++ + S Y+I EM + I PN SF L+ F +
Sbjct: 107 RWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFAR 166
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSV 287
+ +D ++M+R K + + + + LCK +A + EM++ G + P+
Sbjct: 167 TRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRA 226
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ + K +EA++ + M G P++ Y TM+ + K G + AL
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+AK VP T LV L A + A+EL
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 15/338 (4%)
Query: 52 ESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER 111
E + + E +AAA T + L + + + K + I Q + +PD
Sbjct: 487 EKTLDDLFEQSKAAAETLDPGL-CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT-- 543
Query: 112 FHAHSIILYGQANMTEHAV-RTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRV-- 167
++I++ G E+ V R F + D K+ + A L + + K EV R
Sbjct: 544 ---YNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCK-IGEVDRAVK 599
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E + G D+ Y + C A S+ EM R+ P+A+++ ++ G
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K +K ED K M G K V+ Y + +LC EA + ML++G SV
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSV 719
Query: 288 -TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
Y I+GFCK + A K + M + G P + ++ + + G E A +E
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
A G P+ T +++ GL K E+ +L+ LV+E
Sbjct: 780 MAAGGSPPHAATFTAILDGL---RKSDESGKLLKLVQE 814
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E+ G + V YN ++ L + ++ A+ +EML G+ PN+ +++ I F +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM-KS 361
++A + IM P+ + +V +CK G E A E +A G+VP + +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+V L A +V EA+E+ G + K F + +N + GL +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK 272
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
L LK++ N +L A A + + + I +L + + L+++K
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
E I Y + E A++ F + E + +V +N LL AL ++ +
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMI 163
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
++ K G+ P++ TYN ++KA C++ +A+ + EM K P+A ++ +V+
Sbjct: 164 NPLYTNMKKD-GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVS 222
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
K K +D ++ R+ K V +YN I +CK + A LL EM+ G+ P
Sbjct: 223 SLCKAGKIDDAR---ELAGRF--KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Query: 285 NSVTYSHFIYGFCKDGNFE-----------------------------------EAKKFY 309
N V+YS I C GN E EA +
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
++M G PN Y T+++ +C G E AL C + G +PN TT L+ G A +
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 370 SKVSEAKE 377
+ A E
Sbjct: 398 GDLVGASE 405
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+ + SV +NAL+ + + ++ E G+ P++ +Y+ +I + C S +
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN-GVDPNVVSYSCIINSLCVSGNVEL 297
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A+++ A+M + N +F L+ G + K + + ++M + G + V YN IH
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC EA + D+M G PN TYS I GF K G+ A + + M + G P
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N Y MV +CK ++ A ++ +G PN T + + GL G +V A +L+
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477
Query: 380 GLVK-EKFTKNVDTWNEI 396
++ N+ T+NE+
Sbjct: 478 ERMQGHGCLPNITTYNEL 495
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ YN +I C + A + +M R PN +++ L+ GF K
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M +G + V Y + LCK +A +L+++M +G PN++T++ FI G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G E A K M G PN + Y ++ + + YE A G +E A+ PN
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG 380
T +++ G + A + EA +L G
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFG 548
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++G +P++ TY ++ C++S A S++ +M + PN +F + G + E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
K+L+ M+ +G ++ YN + +L ++ K EA L E+ ++ ++PN VTY+ +
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-SIAKGW 352
YGF + G EA + + G +P+S Y TM++ CK G + A + S K W
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
P+ T SL+ G + EA + + + N TWN +
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 2/289 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+A++ I+ L Q ++++ L N ++ I + ++ A T+
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M H R +V + ++ L + + + +E G P+ T+N IK C +
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSL-VEKMTLEGCTPNTITFNTFIKGLCGNG 468
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L M PN +++ L+ ++ KYE+ + Q +E ++ + YN
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSN 314
++ + EA L + L +G P+S+TY+ I+ +CK G + A + R+ S
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
P+ Y ++++ C + E A+ F ++I +G PNF T +LV
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDTY 184
E A++ EM ++ + +V +++ ++ +L ++ + V+ F F + + G ++ T+
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN---VELAFALFAQMFLRGCDANIHTF 317
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+IK A + M + +PN ++ L+ G E+ +V M+R
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR 377
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V+ Y++ I K A + M+S G +PN VTY+ + CK+ F++
Sbjct: 378 SGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQ 437
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M+ G +PN+ + T + +C G E A+ + G +PN TT L+
Sbjct: 438 ANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLD 497
Query: 365 GLAGASKVSEAKELIGLVKE----KFTKNVDTWNEIEAGL 400
L +K EA GL +E N+ T+N + G
Sbjct: 498 ALFRMNKYEEA---FGLFQEIEARNLQPNLVTYNTVLYGF 534
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 6/227 (2%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G KP + YN ++ A + + M + + PN ++ L+ K ++ +
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+K+ M G Y + SLCK K +A+ L + KP+ Y+ I
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALID 252
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G E A K M ++G+ PN Y ++ +C G+ E A + +G
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
N T L+ G K+ EA +L L +++ NV +N + GL
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 5/198 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I+ + IL +M I F ++ G+ + E K+ +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+G K V +YN + +L K L M G+ PN TY+ + CK+
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ A K + MSN G P++ Y TMV +CK G + A +A + P+ +L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA-----RELAGRFKPSVPVYNAL 250
Query: 363 VTGLAGASKVSEAKELIG 380
+ G+ ++ A +L+G
Sbjct: 251 IDGMCKEGRIEVAIKLLG 268
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
AS++ ++ +E + + V +LQ M+ G+ ++ I+ ++ +A +
Sbjct: 74 ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ G KP Y+H + + F+ Y M GL PN Y ++ +CK
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNE 395
+ A E KG P+ T ++V+ L A K+ +A+EL G +F +V +N
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG----RFKPSVPVYNA 249
Query: 396 IEAGL 400
+ G+
Sbjct: 250 LIDGM 254
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A++ + M H ++ +N LL AL Y+E +F E + ++P+L TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-EARNLQPNLVTYN 528
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ F + A + + + P++ ++ ++ + K+ K V Q++ER
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK---VKIAAQLVERV 585
Query: 246 G-MK---SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
MK + Y I C EA A LD+ +++G+ PN T++ + F
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 161/360 (44%), Gaps = 3/360 (0%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ + LLKSE NP L I + P F + +L + +S+ +E ++
Sbjct: 11 KRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIR 70
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDY 161
T+ E I Y + +M + A+ F+ M E + + ++N+LL AL + +
Sbjct: 71 TQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
E + F+ F +T G+ P+L TYN +IK C A +L M + P+ S+G
Sbjct: 131 DEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGT 189
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML-SK 280
L+ K D K+ M G+ V+ YN+ I K A + + +L
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ PN +Y+ I G CK G F+E+ + + M + + Y T+++ +C G+ + A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
KE G P+ +++ G A ++ E EL +++++ + V ++N + GL
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 136/332 (40%), Gaps = 45/332 (13%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYG--QANMTEH 128
D +S I+ L + +G ++ +E+ PD+ ++ +L G +A E
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV-----VYNTMLNGYLRAGRIEE 343
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK--------TYGI--- 177
+ +K M++ R +V ++N L+ L E ++ P+ TYG+
Sbjct: 344 CLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402
Query: 178 ---------------------KPDLDT--YNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ DLDT Y+ +I C +L +M + KP
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N A++ GF + K ED + M G V YN I+ L K + +EA AL+
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
EML KG KPN +TYS + G C+ + A + G P+ ++ +++ +C
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G E AL E + VPN T +L+ G
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 21/287 (7%)
Query: 57 KILEICRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKT-RPDLQNERFH 113
K+ E L PE D + + + ++ L + Y N LEE + R DL
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT---F 430
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
A+S ++ G + + +M +H + + NA++ A ++ R F
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G P + TYN +I ++ S AY+++ EM K KPN ++ L+ G + +K
Sbjct: 491 -VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 232 YE-DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ +N Q +E+ G K V M+N+ IH LC K +A L EM + PN VT++
Sbjct: 550 LDMALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHN 608
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM---CKG 334
+ GF K +FE A K + + S S N Y+M C+G
Sbjct: 609 TLMEGFYKVRDFERASKIWDHILQSWSSSN-------CYYMEHTCQG 648
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
A+++++ L EV V + K +G KP+ N VI F +S A
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTK-HGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K P ++ L+ G K E++ + +++ M G K + Y++ ++ LC+ +K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A L + L KG KP+ ++ I+G C G E+A + Y M PN + T
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 327 MVYFMCKGGDYETA 340
++ K D+E A
Sbjct: 610 LMEGFYKVRDFERA 623
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL----EELKTRPDLQNER 111
E++LE+ A A S +N L E+ + + L E LK RP N
Sbjct: 144 ERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRP---NTC 200
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRH-SVGAFNALLLALTIAKDYKEVKRVFIE 170
+ + ++ E A+ EM + + + +V ++ L+ L KE +F E
Sbjct: 201 IFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEE 260
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
I PD TY+ +IK FC + A I+ M PN ++ L+ GF KE
Sbjct: 261 MVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEG 320
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ E+ +V M+ G+K Y I+ C + + EA LL EM K ++VT++
Sbjct: 321 RLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFN 380
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ G C++G F+EA + ++ G+ N Y ++ F+C+ G+ E + +++
Sbjct: 381 VLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSR 440
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTW 393
G+VP++ T L+ L A V A L GL + FT +W
Sbjct: 441 GFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSW 484
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 124/280 (44%), Gaps = 4/280 (1%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E LE+ + S+ + + +S I+ L + EE+ ++ + + +
Sbjct: 216 ESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDAL-TY 274
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
S+++ G + A + + M + +V ++ L+ +E K VF E K
Sbjct: 275 SVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEM-K 333
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+KPD Y +I FC A +L EM K +A +F L+ G +E +++
Sbjct: 334 SSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFD 393
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ ++L+ + G+ Y + ++ LC+ + ++ ALL MLS+G P+ T + +
Sbjct: 394 EALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELL 453
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
C+ G + A ++ G +P + ++ ++C+
Sbjct: 454 VCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICR 493
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 158/340 (46%), Gaps = 15/340 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R P D + +++ +N + + + ++LE L + N +++
Sbjct: 2 KLLDEMRDKGCAP----DIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTV--SYN 55
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+L G A E A + +EM +V FN L+ L + V + PK
Sbjct: 56 IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK- 114
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P+ +YN ++ AFC+ A + + M + P+ S+ L+ + + +
Sbjct: 115 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 174
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+L ++ G + YN I L K K EA LLDEM+SKG++P+ +TY+
Sbjct: 175 AIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIAS 234
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C++ EEA + + + + G+ P +Y ++ +CK + A+ I+ G +P
Sbjct: 235 GLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMP 294
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTK 388
N +T LV GLA V EA++L+ G+V +KF K
Sbjct: 295 NESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMK 334
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN V+ C+ A L + +PN S+ ++ G + E++ED
Sbjct: 11 GCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDA 70
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+++ M G V +N+ I LC+ A +L+++ G PNS++Y+ ++
Sbjct: 71 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK ++A F +M + G P+ Y T++ +C+ G+ + A+ + KG P
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +++ GL A K EA EL+ ++ + ++ T+ I +GL
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E++ R F +M E L V +N+L+ +EV +F E K G PD+ TYN
Sbjct: 306 ENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM-KDVGCVPDIITYNG 364
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ A+ +EM +KPN ++ L+ F KE + K+ M R G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I + CK EA LL++ML G+K N VTY+ + G CK G EA+
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +R M G+SPN VY +V+ K E A+ K+ P+ S++ G
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544
Query: 367 AGASKVSEAKELIGLVKEK 385
K+ E K ++ +K +
Sbjct: 545 CSQRKLEETKLILEEMKSR 563
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 2/282 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
++ + + E A F M + + N LL L+ + + + V++ F + GI
Sbjct: 228 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIA 286
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TYN +I C+ D ++ + +M + P+ ++ +L+ G+ K E+V +
Sbjct: 287 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 346
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M+ G + YN I+ CK K A EM + G+KPN VTYS I FCK
Sbjct: 347 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 406
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G + A K + M +GL PN Y +++ CK G+ A + + G N T
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+L+ GL A ++ EA+E+ ++K+ + N + + G
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 1/283 (0%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+Y E+K N ++ I + + M + A++ F +M L + + +L+ A
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A + E ++ + + G+K ++ TY ++ C++ A + M + I PN
Sbjct: 440 CKAGNLTEAWKLLNDMLQA-GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ALV G+ K E+ ED K+L+ M +K + +Y I C RK E K +L+
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM S+G+ N V + I + K G +A F++ M + G+ Y ++ +CK G
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAG 618
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E A+ + ++ G PN SL+ GL + + AK+L
Sbjct: 619 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKL 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 18/343 (5%)
Query: 62 CRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ---------NE 110
C+A LT L D L + +N ++ +G+ + ++ + N+
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ + + Y +A E A++ K+M E ++ + + +++ + +E K + E
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 559
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K+ GI + +I A+ ++ SS A + EM ++ ++ L+ G K
Sbjct: 560 M-KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAG 618
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E M G++ V++Y I LCK AK L DEM +GM P+ ++
Sbjct: 619 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFT 678
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G K GN +EA M+ + + VY ++V + G+ A F E I K
Sbjct: 679 ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 738
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
G +P L+ ++ EA EL +GL+ E T
Sbjct: 739 GILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 81/211 (38%), Gaps = 6/211 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
++ + F E A + M P A S L+ K + V K M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ V YNV I LCK ++ L +M G+ P+ VTY+ I G+ K G+
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EE + M + G P+ Y ++ CK A + E G PN T +L
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Query: 363 VTG------LAGASKVSEAKELIGLVKEKFT 387
+ + GA K+ GL+ +FT
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 1/179 (0%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L + F + E+ N+ M + N +H L K + ++M+
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+ P+ TY+ I CK+G+ E +++ + M GLSP+ Y +++ K G E
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
E G VP+ T L+ K+ A E +K K NV T++ +
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
SG +++V +L EA M + P + + + ++ K GN + +KF
Sbjct: 217 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 276
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M +G++P+ Y M+ ++CK GD E + + G P+ T SL+ G
Sbjct: 277 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 336
Query: 369 ASKVSEAKEL------IGLVKEKFTKN 389
+ E L +G V + T N
Sbjct: 337 VGSLEEVASLFNEMKDVGCVPDIITYN 363
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 9/347 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
KILE+ + P D + +++ I+ +A N L+ + PD+ S
Sbjct: 158 KILEVLEGSGAVP----DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ G+ + A+ M + V + L+ A + ++ E + G
Sbjct: 214 LCDSGK---LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM-RDRG 269
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD+ TYN ++ C+ A L +M +PN + ++ ++ D
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+L M R G V +N+ I+ LC+ A +L++M G +PNS++Y+ ++GF
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGF 389
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+ + A ++ M + G P+ Y TM+ +CK G E A+ + +KG P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
T +++ GLA A K +A +L+ ++ K K + T++ + GL +
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 152/342 (44%), Gaps = 15/342 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L ++ + N H+
Sbjct: 260 KLLDEMRDRGCTP----DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN--VITHN 313
Query: 117 IILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
IIL + A + +M SV FN L+ L + + PK
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPK- 372
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G +P+ +YN ++ FC+ A L M + P+ ++ ++ K+ K ED
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L + G + YN I L K K +A LLDEM +K +KP+++TYS +
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G ++G +EA KF+ G+ PN+ + +++ +CK + A+ F I +G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKP 552
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T+ L+ GLA EA EL+ GL+K + V
Sbjct: 553 TETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 7/316 (2%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQA 123
L + + D + ++I I + + L+E++ R PD+ + I G+
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR- 289
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A++ +M + +V N +L ++ + + +++ + + G P + T
Sbjct: 290 --LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVT 346
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C A IL +M + +PN+ S+ L+ GF KE+K + + L+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + YN + +LCK K +A +L+++ SKG P +TY+ I G K G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A K M L P++ Y ++V + + G + A+ F E G PN T S++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIM 526
Query: 364 TGLAGASKVSEAKELI 379
GL + A + +
Sbjct: 527 LGLCKTRQTDRAIDFL 542
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E +G PD+ +I+ FC + A IL ++ P+ ++ +++G+
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC 183
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K ++N L +++R + V YN + SLC K +A +LD ML + P+ +
Sbjct: 184 KA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I C+D +A K M + G +P+ Y +V +CK G + A+ F +
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ G PN T ++ + + +A++L+ ++++ F+ +V T+N
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K L+ M +G + I C++ K +A +L+ + G P+ +TY+ I G+
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGY 182
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G A MS +SP+ Y T++ +C G + A+ + + P+
Sbjct: 183 CKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T L+ S V +A +L+ ++++ T +V T+N + G+
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N + L + + E L+ M+ G P+ + + I GFC+ G +A K ++
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFC-KESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SG P+ Y M+ CK G+ AL + S++ P+ T +++ L + K+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLK 221
Query: 374 EAKELI 379
+A E++
Sbjct: 222 QAMEVL 227
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q+ + A+ F M + L ++N ++ L K E K +F E K KP
Sbjct: 139 FCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKP 197
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T++ +I FC++ D + +L EM++ ++ + + AL++GF + E ++
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M R + V Y+ +++LCK +K EA +LD M ++P+ V Y+ G K+
Sbjct: 258 NEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKN 317
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +A K +M G PN+ Y ++ +CK G + ALG + KG P+ T
Sbjct: 318 GRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTY 377
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
+LV GL G K+ EA +L+ L+ K
Sbjct: 378 STLVKGLCGVGKIDEAVDLLNLLMSK 403
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S + N L+ L AK Y V V + + + P + + +I++F + S A+ +
Sbjct: 58 SYSSCNTLIDNLRKAKHYDHVISVHSKMA-SVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L + ++ N +F L+ GF + + MM+R + YN I+ LCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
++ EAK L EM KPNSVT+S I GFCK+G+ EE M GL + V
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y ++ C GD E E + K PN T L+ L K EA +++
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 4/277 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E F EM + +V ++ L+ AL + +KE ++ ++ ++PD+ Y
Sbjct: 251 ERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQM-LDTMTGCKVRPDVVAYTV 309
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ ++ +S A +L M ++ +PN ++ A++ G KE + +D +L+ M + G
Sbjct: 310 LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK--GMKPNSVTYSHFIYGFCKDGNFEE 304
K V Y+ + LC + K EA LL+ ++SK +KP+ ++ I CK
Sbjct: 370 KKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
AK+ Y M G N Y ++ G AL K+++ G PN T L+
Sbjct: 430 AKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489
Query: 365 GLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
GL +S AK L + T+ V +N + A L
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + N +I ++ S+ ++M S+ P +S AL+ F +K V
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L ++ + G V +N+ + C+ +A L M + P+ V+Y+ I G CK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
EAK+ ++ M PNS + ++ CK GD E G +E G +
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+L++G + KEL ++++ T NV T++
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYS 273
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 131/306 (42%), Gaps = 1/306 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +A+++ + LS+ + + L+ + R + N + I + + A+
Sbjct: 303 DVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGIL 362
Query: 134 KEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ M + + V ++ L+ L + K + V + + K + IKPD+ +N VI+ C
Sbjct: 363 ETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELC 422
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + M + N ++ L+ G+ K ++ + G+ +
Sbjct: 423 KQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAA 482
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y V I+ LCK++ + AK L ++ + G +P Y+ + C++ + E+A+ ++ M
Sbjct: 483 TYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM 542
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
N+ P+ + ++ K GD E+A E + VP+ T L+ ++
Sbjct: 543 RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQL 602
Query: 373 SEAKEL 378
EA L
Sbjct: 603 DEAASL 608
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 4/253 (1%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E ++ V AFN ++ L + + KRV+ + G ++ TYN +I + +
Sbjct: 404 EFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVER-GFPSNIVTYNILIDGYLSAGKL 462
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A + + I PNA+++ L+ G K + + G + VS YN
Sbjct: 463 TKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ SLC+ +A+ L EM + P+ V+++ I G K G+ E AK+ M N L
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNL 582
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P++ + ++ K G + A + ++ G VP+ SL L G S + ++
Sbjct: 583 VPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSL---LKGYSLKGKTEK 639
Query: 378 LIGLVKEKFTKNV 390
++ ++++ K+V
Sbjct: 640 VVSMLQQMADKDV 652
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
HA R + M E ++ +N L+ A + ++ + + GI P+ TY +
Sbjct: 429 HAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS-GISPNAATYTVL 487
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C+ S A + + +P S + L+A +E E + Q M
Sbjct: 488 INGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANH 547
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V +N+ I K AK LL EML+ + P+++T+S I F K G +EA
Sbjct: 548 DPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAAS 607
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
Y M + G P++ ++ +++ G E + ++ K V + +++ L
Sbjct: 608 LYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667
Query: 368 GASKVSEAKELI 379
SK + ++++
Sbjct: 668 NMSKDVDIEKIL 679
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P + YN +I +C D +L EM+ K P ++G+L+
Sbjct: 1169 LIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLG 1228
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+ E + + M + G V +YN I +LCK R +A +L +M + G P+ +
Sbjct: 1229 KKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDII 1288
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I G C +G+ +A+ F R L+PN Y +++ C G+ A E
Sbjct: 1289 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1348
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIEAGL 400
+ +G P+ T +L+ GL A KVSEA +V+EK T+ +V+ +N + +GL
Sbjct: 1349 MGRGHTPDVVTFGALIHGLVVAGKVSEAL----IVREKMTERQVFPDVNIYNVLISGL 1402
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 137/333 (41%), Gaps = 9/333 (2%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL +S + IL+ A+ P D + F+ I L + +L E R
Sbjct: 1261 ALCKCRSATQAMVILKQMFASGCDP----DIITFNTLITGLCHEGHVRKAEHFLRE-AIR 1315
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRT--FKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+L + +++ +++G E V + EM V F AL+ L +A
Sbjct: 1316 RELNPNQL-SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVS 1374
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + E + PD++ YN +I C+ +A +IL EM K+++P+ + L
Sbjct: 1375 EAL-IVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF + E D K+ + ME G+ + N I C+ +EA + M G
Sbjct: 1434 IDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1493
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ TY+ I G+ K GN A ++ M PN Y +++ CK GD + A G
Sbjct: 1494 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEG 1553
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
A+ PN T L+ L KV A
Sbjct: 1554 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1586
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 89/207 (42%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ YG P++ NR++K E A + EM K + S LV G E +
Sbjct: 1104 EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRV 1163
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ K+++ G V YNV I C+ LL EM +KG P VTY
Sbjct: 1164 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSL 1223
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K G+ E+ + M G SPN +Y +++ +CK A+ K+ A G
Sbjct: 1224 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGC 1283
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T +L+TGL V +A+ +
Sbjct: 1284 DPDIITFNTLITGLCHEGHVRKAEHFL 1310
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 1/251 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ ++ + +L+ L D +++ +F+E K G P++ YN VI A C+
Sbjct: 1207 EMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR-GFSPNVQIYNSVIDALCKC 1265
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ A IL +M P+ +F L+ G E L+ R + Y
Sbjct: 1266 RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1325
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
IH C + A LL EM+ +G P+ VT+ I+G G EA M+
Sbjct: 1326 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1385
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+ P+ ++Y ++ +CK A +E + K P+ +L+ G + + +
Sbjct: 1386 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 1445
Query: 375 AKELIGLVKEK 385
A+++ ++ K
Sbjct: 1446 ARKIFEFMEHK 1456
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G PD TY VI + + + + A L +M ++ KPN ++ +L+ G+ K
Sbjct: 1489 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 1548
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + M+ + V Y + I SL K K A + ML PN VT +
Sbjct: 1549 DFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 1608
Query: 293 IYGF-----------CKDGNFEEAKK-----FYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+ G C + + K F +++ + G P +S Y +++ +C+
Sbjct: 1609 VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNM 1667
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
AL F KG+VPN T SL+ G K
Sbjct: 1668 LREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P++ TYN +I+ FC + EM+R PN ++ L+ + K + ++
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L+ M GM+ + YNV I+ LC+ EA +L+EM KG P+ VTY+ + G+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+GNF +A + M +G+SP+ Y ++ MCK + A+ F + +G PN
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
T +L+ G + ++EA ++ + E F+ +V T+N
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 224
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ IN L + LEE+ + +E + + Y + A+ E
Sbjct: 81 ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 140
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + SV + AL+ ++ A++ F + + G++P+ TY +I F
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQG 199
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ AY IL EM P+ ++ A + G E+ E+ V+Q M G+ V Y+
Sbjct: 200 LLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYS 259
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I C+ + A + EM+ KG+ P++VTYS I G C+ EA + M +
Sbjct: 260 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 319
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y T++ C GD AL E I KG++P+ T L+ GL ++ EA
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379
Query: 376 KELI 379
K L+
Sbjct: 380 KRLL 383
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 14/296 (4%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
+ ++I++ G ++ E + F EM+ + +V +N L+ A Y ++ R+
Sbjct: 11 YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA------YCKMGRIDEA 64
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++ + G++P+L +YN +I C A+ IL EM K P+ ++ L+ G
Sbjct: 65 FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ KE + + M R G+ V Y I+S+CK R A D+M +G++PN
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
TY+ I GF + G EA + M+ SG SP+ Y ++ C E ALG +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
E + KG P+ + ++++G ++ A ++ +V++ + + T++ + GL
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 142/355 (40%), Gaps = 51/355 (14%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +A N ++ ++++ R NER + I + + + A R E
Sbjct: 151 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 210
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E SV +NA + + + +E V E + G+ PD+ +Y+ +I FC
Sbjct: 211 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKG 269
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A+ + EM K + P+A ++ +L+ G + + + + Q M G+ Y
Sbjct: 270 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 329
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS------------------------- 290
I++ C +A L DEM+ KG P++VTYS
Sbjct: 330 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 389
Query: 291 -------------------------HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
I GFC G EA + + M P +VY
Sbjct: 390 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 449
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+++ C+GG+ A KE I G+VP+ T+ +L+ L E E+IG
Sbjct: 450 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R + PN ++ L+ GF + + MER G V YN I + CK+ +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA LL M SKGM+PN ++Y+ I G C++G+ +EA + M G +P+ Y T
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++ CK G++ AL E + G P+ T +L+ + A ++ A E
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 172
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ + PN TY+ I GFC G ++ + M +G PN Y T++ CK G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNE 395
+ A G K +KG PN + ++ GL + EA E++ + K FT + T+N
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 396 IEAG 399
+ G
Sbjct: 121 LLNG 124
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 151/384 (39%), Gaps = 59/384 (15%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR-PDLQNERFHAHSIILYGQANMTEHAVR 131
LD A+ I LS F + +EE++ P L + + + A M AV
Sbjct: 154 LDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVE 213
Query: 132 TFKEM-------DEH---------------------------KLRHSVGAFNALLLALTI 157
EM DE+ + + SV F +LL
Sbjct: 214 VLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCK 273
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E K V ++ K GI+PD+ YN ++ + ++ AY +L EM RK +PNA+
Sbjct: 274 EGKLMEAKHVLVQM-KDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNAT 332
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S+ L+ K E+ E+ ++ M+ G ++ V Y+ I CK K LLDEM
Sbjct: 333 SYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEM 392
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ +G PN V Y H + K EE K+ M G +P+ S+Y T++ CK G+
Sbjct: 393 IQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEV 452
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA----KELIG------------- 380
+ + E + G P T ++ G + EA KE++G
Sbjct: 453 KEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLK 512
Query: 381 ------LVKEKFTKNVDTWNEIEA 398
L EK D WN I A
Sbjct: 513 ELMNSLLRAEKLEMAKDAWNCITA 536
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 39/285 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA A KEM + + ++ L+ +L + +E R+F+E +T G +
Sbjct: 306 YAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEM-QTNGCQA 364
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ +I FC+ Y +L EM ++ PN + ++ K+E+ E+ +++
Sbjct: 365 DVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELV 424
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M++ G +S+YN I CKL + E L +EM S G+ P T+ I GF +
Sbjct: 425 NEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQ 484
Query: 300 GNFEEAKKFYRIMSNSGL--SP------------------------------------NS 321
G EA ++++ M GL +P N
Sbjct: 485 GCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNV 544
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
S + ++ + G + A FC + + K +PN T L+ GL
Sbjct: 545 SAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGL 589
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS---IKPNASSFGALVAGFYKE 229
K G + D D Y +IK + ++++ EM +++ I P F L+ F
Sbjct: 148 KQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQV--FVILMRRFASA 205
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+VL M +YG + ++ + +LCK EA +L ++M + KP+ +
Sbjct: 206 RMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYR-WKPSVKHF 264
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ +YG+CK+G EAK M + G+ P+ VY ++ + G A KE
Sbjct: 265 TSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRR 324
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
K PN T+ L+ L ++ EA L
Sbjct: 325 KRCEPNATSYTVLIQSLCKHERLEEATRL 353
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 100/255 (39%), Gaps = 6/255 (2%)
Query: 47 TLLKSESNPEKILEICR--AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
L++S E++ E R T D + +S I+ + + L+E+ +
Sbjct: 336 VLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQ 395
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
N+ + H ++ + + E EM + + +N ++ + KE
Sbjct: 396 GHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEG 455
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI--KPNASSFGAL 222
+++ E ++ G+ P +DT+ +I F E A EM + + P + L
Sbjct: 456 IQLWNEM-ESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKEL 514
Query: 223 VAGFYKEEKYEDVNKVLQMM-ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+ + EK E + G + VS + + IH+L EA + +M+ K
Sbjct: 515 MNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKD 574
Query: 282 MKPNSVTYSHFIYGF 296
+ PN T++ ++G
Sbjct: 575 LMPNPDTFAKLMHGL 589
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 17/320 (5%)
Query: 74 DRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--H 128
D++ F+ +N ++ N I ++ E PD+ + ++ ++ G + E
Sbjct: 262 DQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV-----YTYNSLISGMCKLGEFEK 316
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK---EVKRVFIEFPKTYGIKPDLDTYN 185
A+ ++M + + +N L+ AL + + ++ R+ + + G+ PD+ T+N
Sbjct: 317 AIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV----SKGLLPDVCTFN 372
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C S + A + EM K KP+ ++ L+ E + ++ +L+ ME
Sbjct: 373 TLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS 432
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G +YN I LCK R+ +A+ + D+M G+ +SVTY+ I G CK+ EEA
Sbjct: 433 GCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEA 492
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M GL P+ Y +++ + C+ GD E A + + G P+ T +L+ G
Sbjct: 493 SQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGG 552
Query: 366 LAGASKVSEAKELIGLVKEK 385
L A +V A +L+ V+ K
Sbjct: 553 LCRAGRVDVASKLLRSVQMK 572
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 6/319 (1%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
+L++++ F+ I+ L++LK+ + N A I + + E+ ++ + +E +
Sbjct: 64 QLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKP 121
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+N L AL K V+ + + GI D+ T+N +IKA C++ A +
Sbjct: 122 DTNFYNIALNALVEDNKLKLVEMLHSKMVNE-GIVLDVSTFNVLIKALCKAHQLRPAILM 180
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG-MKSGVSMYNVRIHSLC 262
L EM +KP+ +F L+ GF +E K+ + M YG + + VS+ V ++ C
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSV-KVLVNGFC 239
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K + EA + E+ +G P+ VT++ + GFC+ GN +A M G P+
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-L 381
Y +++ MCK G++E A+ ++ I + PN T +L++ L +++ A +L L
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359
Query: 382 VKEKFTKNVDTWNEIEAGL 400
V + +V T+N + GL
Sbjct: 360 VSKGLLPDVCTFNTLIQGL 378
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L V FN L+ L ++K+ +F E K G KPD TY+ +I + C A
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM-KNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+L EM+ NA + L+ G K + ED ++ ME G+ YN I
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK ++ EA L+D+M+ +G+KP+ TY+ + FC+ G+ E+A + M+++G P+
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
Y T++ +C+ G + A + KG V
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 13/347 (3%)
Query: 52 ESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQ 108
E N K++E+ + + LD F++ I L +A+ LEE+ +PD
Sbjct: 135 EDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEI 194
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
I G N A++ K+M + + + L+ +E R
Sbjct: 195 TFTTLMQGFIEEGDLN---GALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFV 251
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+E + G PD T+N ++ FC + + A I+ M K P+ ++ +L++G K
Sbjct: 252 LEVSEE-GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCK 310
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
++E ++LQ M YN I +LCK + A L ++SKG+ P+ T
Sbjct: 311 LGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCT 370
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G C N + A + + M N G P+ Y ++ +C + AL KE
Sbjct: 371 FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAK------ELIGLVKEKFTKN 389
+ G N +L+ GL + ++ +A+ EL+G+ + T N
Sbjct: 431 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+EM + ++ L+ +L + KE + E ++ G + YN +I
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM-ESSGCARNAVVYNTLI 445
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+S A I +M+ + ++ ++ L+ G K ++ E+ ++++ M G+K
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN + C++ +A ++ M S G +P+ TY I G C+ G + A K
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565
Query: 309 YRIMSNSG--LSPNSSVYFTMVYFMCK--------------------------------- 333
R + G L+P++ FM K
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCN 625
Query: 334 -GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
GG + A+ F E + KG +P F + L GL S ELI +V EK
Sbjct: 626 GGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEK 678
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 20/336 (5%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTF 133
+ +S I+ L + ++L E+ R N +S IL+G N+ + A F
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPN--VVTYSSILHGFCNLGRSNEATSLF 175
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K+M E + FN L+ L+ E + VF E G++P+++TYN ++ +C
Sbjct: 176 KQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF-ETMIEKGVEPNVNTYNALMDGYCS 234
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A + M RK P+ S+ L+ G K + ++ +L M +
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ + C+ + +A+ LL+EM S G+ P+ +TYS + G CK G+ +EA + + M
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
S + PN +Y ++ MC G E A KG P+ T +++GL +
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414
Query: 374 EAKELI---------------GLVKEKFTKNVDTWN 394
EA EL ++ + F +N DT N
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 47/368 (12%)
Query: 74 DRLAFSIAINKLS-EANYFNGISQYLEELKT--RPDLQNERFHAHSIILYGQANM--TEH 128
+ + FS +N LS +A + + + E +K PD+ +S I+ G M T
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVI-----TYSTIINGLCKMGSTTM 100
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ K+M+E + +V ++ ++ +L K E E GI P++ TY+ ++
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR-GISPNVVTYSSIL 159
Query: 189 KAFCESSDSSSAYSILAEM-----------------------------------DRKSIK 213
FC S+ A S+ +M K ++
Sbjct: 160 HGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVE 219
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PN +++ AL+ G+ + + ++ K+ +M R G V YN+ I CK + EAK L
Sbjct: 220 PNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGL 279
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM K + P++VTYS + GFC+DG ++A+K M + GL P+ Y ++ +CK
Sbjct: 280 LAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCK 339
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDT 392
G + A K PN L+ G+ K+ A+EL L + +V T
Sbjct: 340 QGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVT 399
Query: 393 WNEIEAGL 400
+ + +GL
Sbjct: 400 YTVMISGL 407
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDS--SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
I+PD+ T +I FC S+ A+S+L M + ++PN +F L+ G + K D
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
K+ M + G + V Y+ I+ LCK+ A LL +M KG KPN V YS I
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
CKD EA +F M N G+SPN Y ++++ C G A K+ + + +P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
+ T LV GL+ + EA+ + + EK + NV+T+N + G
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDG 231
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M A F+ M E + +V +NAL+ E +++F + G P + +Y
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK-GCAPSVRSY 260
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +IK C+S A +LAEM K++ P+ ++ L+ GF ++ + +D K+L+ M
Sbjct: 261 NILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS 320
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG+ + Y++ + LCK EA LL M ++PN Y+ I G C G E
Sbjct: 321 YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEA 380
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A++ + + G+ P+ Y M+ + KGG A ++ G +PN T ++
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQ 440
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
G S A LI +V F+ + T+
Sbjct: 441 GFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ M E A + F M SV ++N L+ + E K + E + PD
Sbjct: 235 QSQMDE-AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHK-ALTPDT 292
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ ++K FC+ A +L EM + P+ ++ ++ G K+ ++ ++L+
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ ++ + +Y + I +C K A+ L + KG++P+ VTY+ I G K G
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + +R M+ G PNS Y ++ + GD A +E + +G+ + +T +
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM 472
Query: 362 L 362
L
Sbjct: 473 L 473
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 117/225 (52%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P++ YN +I + C+ + A+ + +EM K I P+ ++ AL++GF K D
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M +K V +N+ +++ CK K E K + D M+ +G+KPN VTY+ + G+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C +AK + M+ G++P+ Y M+ CK ++ A+ KE K +P+
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T SL+ GL+ + ++S A +L+ + ++ + T+N I L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 145/330 (43%), Gaps = 2/330 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D++++ I+ L + L+ + N + I + + A
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F EM + V ++AL+ I + +F + IKPD+ T+N ++ AF
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM-ILENIKPDVYTFNILVNAF 305
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ ++ M ++ IKPN ++ +L+ G+ ++ + M + G+ +
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y++ I+ CK++K EA L EM K + P+ VTYS I G K G A +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G+ P Y +++ +CK + A+ + KG PN T L+ GL + K
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 372 VSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ +A+++ GL+ + NVDT+ + G
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ + +D + ++ +V +N ++ ++ K E +F E + GI PD+ TY+
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM-ISKGISPDVVTYS 264
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC + A + +M ++IKP+ +F LV F K+ K ++ V MM +
Sbjct: 265 ALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ 324
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K YN + C +++ +AK++ + M G+ P+ +YS I GFCK F+EA
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ M + P+ Y +++ + K G AL + +G P T S++
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
L +V +A L+ +K+K N+ T++ + GL Q
Sbjct: 445 LCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F M + ++ + +N+L+ + K+ + K +F + G+ PD+ +Y+ +I F
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGF 375
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A ++ EM RK+I P+ ++ +L+ G K + +++ M G+ +
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + +LCK+ + +A ALL ++ KG++PN TYS I G C+ G E+A+K +
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ G + N Y M+ C G + AL + G +P+ T + ++ L +
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 372 VSEAKELI 379
A++L+
Sbjct: 556 NDMAEKLL 563
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
K + +Y+ F ++D A S+ + R++ P A F ++ K + Y V
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ Q ME G+K + N+ I+ C+L A ++ ++L G P+++T++ I G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G ++A F+ + G + Y T+++ +CK G+ AL + PN
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+++ + V+EA +L ++ + + +V T++ + +G
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 41/274 (14%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDL 181
N + AV F + FN +L +L +K Y V + +EF GIKP+L
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEF---RGIKPNL 120
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
N +I FC+ A+S+ A++ + P+ +F L+ G
Sbjct: 121 VNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKG---------------- 164
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
LC + +A D++++ G + ++Y I+G CK G
Sbjct: 165 -------------------LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A + + + + PN +Y T++ MCK A E I+KG P+ T +
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSA 265
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
L++G K+++A +L ++ E +V T+N
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 111/261 (42%), Gaps = 5/261 (1%)
Query: 27 ILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLS 86
++ G K + + L+K + + I + P D ++SI IN
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP----DIQSYSIMINGFC 376
Query: 87 EANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVG 146
+ F+ +E+ + + + ++ I ++ +A++ +M + + ++
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIR 436
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N++L AL + + + K GI+P++ TY+ +IK C+S A +
Sbjct: 437 TYNSILDALCKIHQVDKAIALLTKL-KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ K N ++ ++ GF E + + +L ME G Y + I SL K +
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 267 CAEAKALLDEMLSKGMKPNSV 287
A+ LL EM+++G++P +
Sbjct: 556 NDMAEKLLREMIARGVRPRQI 576
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A+ F E ++ + +N+L+ L + +V E + G PD+ TYN
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYN 400
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI C+ + S A ++ + K P+ +F L+ G+ K K + ++++ M Y
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN ++ LCK K E EM+ KG PN +TY+ I FC+ EEA
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K MS GL P++ + T++Y C+ GD E A ++ KG+ T +L+
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580
Query: 366 LAGASKVSEAKEL 378
+G + A+++
Sbjct: 581 FSGKLNMHMAEKI 593
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 137/324 (42%), Gaps = 40/324 (12%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+ SI Y +A AV F+ MD + A+NA++ AL A + + +V++
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G+ PDL T+ +++FC ++ A +L + + A ++ +V G Y
Sbjct: 113 LAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 167
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK-------- 283
D ++ M + ++ +N +H+LCK EA LL +++ +GM
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227
Query: 284 --------------------------PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
P+ VTY+ I G CK +EA + R M N G
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ CK + A K+++ KG+VP+ T SL+ GL V A E
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 378 LIGLVKEKFTK-NVDTWNEIEAGL 400
L + K K ++ +N + GL
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGL 371
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C D A + E K IKP+ + +LV G +
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V+ M G + YN+ I+ LCK+ ++A ++++ + KG P+ T++ I G
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M G++P++ Y +++ +CK G +E I KG PN
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ ++K+ EA ++I
Sbjct: 501 PITYNILIENFCRSNKMEEASKVI 524
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N + L A E R ++ + Y + PD+ TYN +I+ C+ S A L M
Sbjct: 225 YNIWIRGLCEAGRLPEAVR-LVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P+ ++ ++ G+ K ++ ++L+ G Y I+ LC
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A L +E +KG+KP+ V Y+ + G C G A + M+ G P+ Y +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KF 386
+ +CK G+ A ++I KG++P+ T +L+ G K+ A +L+ + E
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462
Query: 387 TKNVDTWNEIEAGL 400
+ T+N + GL
Sbjct: 463 APDTITYNSVLNGL 476
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YGI PD TYN V+ C++ + EM K PN ++ L+ F + K E+
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+KV+ M + G+ +N I+ C+ A L ++ KG + T++ I
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 579
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
F N A+K + M + G +S Y ++ CK + + A E I KG++P
Sbjct: 580 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ +T ++ L +V +A +I ++
Sbjct: 640 SMSTFGRVINSLTVNHRVFQAVGIIHIM 667
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ + M E+ + +N++L L A EV F E G P+ TYN
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM-ILKGCHPNPITYNI 506
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ FC S+ A ++ +M ++ + P+A SF L+ GF + E + Q +E G
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N I + A+ + DEMLSKG + +S TY I G CK N + A
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
M G P+ S + ++ + A+G + G VP
Sbjct: 627 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 144/325 (44%), Gaps = 32/325 (9%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+ +L+ A +G+ L+E++ R E +I + +A + A++TF +
Sbjct: 58 VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117
Query: 142 RH-SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
R V +N LL AL V V+ K G+ P++ TYN +I+A C++ +A
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKA-GVDPNVYTYNLLIRALCQNDRVDAA 176
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYE--------------------------- 233
+L EM RK P+ S G +V+G K + E
Sbjct: 177 RKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEF 236
Query: 234 ---DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+V V+ M + G++ V Y + + CK R+ A A+L M+S G PN +T++
Sbjct: 237 RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFT 296
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ GF +DG +A + M + G +P++ Y ++ +C GD + AL F
Sbjct: 297 ALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRN 356
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA 375
+PN TT +LV G + A + A
Sbjct: 357 ALLPNATTYSTLVDGFSNAGDLDGA 381
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++NA++ AL EV V E + G++P++ TY ++ AFC++ + A +ILA
Sbjct: 224 SYNAVVHALCGEFRMWEVFSVVNEMVQR-GLQPNVVTYTTIVDAFCKARELRMACAILAR 282
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M PN +F ALV GF+++ K D + M G YNV I LC +
Sbjct: 283 MVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD 342
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A + M + PN+ TYS + GF G+ + A + M +SG PN VY
Sbjct: 343 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 402
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
M+ +CK ++ A + + PN T +L+ L +V A + G+ +
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462
Query: 386 FTKNVDTWNEIEAGL 400
N T+NE+ GL
Sbjct: 463 CHPNDRTYNELLHGL 477
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P +YN +I+ C D A M R ++ PNA+++ LV GF +
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G K V +Y I LCK +A++L+D+ML PN+VT++ I
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G A + M +G PN Y +++ + + G+++ A E + G+ +
Sbjct: 442 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 501
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T +++ L A L+G ++ + + T+N I
Sbjct: 502 LVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 122/291 (41%), Gaps = 1/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ I L G + +K L N ++ + + A + A+ + E
Sbjct: 328 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 387
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + ++ L + + + I+ P+ T+N +I C+
Sbjct: 388 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAES-LIDKMLMDNCPPNTVTFNTLIGRLCDCG 446
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ M R PN ++ L+ G ++E ++D ++ M G + + YN
Sbjct: 447 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYN 506
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I+ LC++ A LL M+ +G++P++ T++ I+ +CK+G A M+
Sbjct: 507 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAV 566
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
N Y ++ +C G A+ + + + +G PN T LV +
Sbjct: 567 NCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 105/278 (37%), Gaps = 33/278 (11%)
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIK 213
L A D V+ E + G+ D I AF + + A D
Sbjct: 61 LAAAGDVDGVQYALQEM-RLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 119
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P + L+ +E V V M + G+ V YN+ I +LC+ + A+ +
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF---------------------YRI- 311
LDEM KG P+ V++ + G CK G EEA+ F +R+
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 239
Query: 312 --------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
M GL PN Y T+V CK + A ++ G PN T +LV
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299
Query: 364 TGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
G KV +A + +V E + + ++N + GL
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 337
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 2/267 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F M + L + ++ L+ + A D ++ E K+ G KP++ Y +I
Sbjct: 346 ALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM-KSSGCKPNVVVYTNMI 404
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A S++ +M + PN +F L+ + V M R G
Sbjct: 405 DVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 464
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN +H L + +A A++ EML+ G + + VTY+ I C+ + A
Sbjct: 465 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 524
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M G+ P++ + +++ CK G A + A N L++ L
Sbjct: 525 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 584
Query: 369 ASKVSEAKE-LIGLVKEKFTKNVDTWN 394
K+S A L+ ++ E N TWN
Sbjct: 585 QGKLSNAMVYLLKMLYEGICPNEATWN 611
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 153/333 (45%), Gaps = 12/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYL---EELKTRPDLQNERFHAHSIIL--YGQANMTEH 128
D +++S IN L ++ + Q L EE +P+L A++ I+ + +
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV-----AYTTIIDSLCKDTLVND 250
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ EM + + V ++ +L E +F E + P+ T+ ++
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR-NVMPNTVTFTILV 309
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + M +K +PNA ++ AL+ G+ + ++ KVL +M G
Sbjct: 310 DGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN+ I+ CK R+ EAK+LL EM K + P++VTYS + G C+ G +EA
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M +SGL P+ Y T++ +CK G + AL K P+ L+ G+
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
A K+ AKEL L + + T+ + GL
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGL 522
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 18/315 (5%)
Query: 100 ELKTRPDLQNE---RFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFN 149
E+K L NE R H +I Y ++ T A++ ++M+E + ++ A+
Sbjct: 177 EIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYT 236
Query: 150 ALLLAL---TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++ +L T+ D ++ ++ GI PD+ TY+ ++ FC + A + E
Sbjct: 237 TIIDSLCKDTLVNDAMDLLSEMVD----RGIPPDVVTYSTILHGFCSLGHLNEATILFNE 292
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M +++ PN +F LV G KE + V + M + G + YN + C +
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA+ +LD M+ KG P +Y+ I G+CK +EAK MS L+P++ Y T
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-K 385
++ +C+ G + AL KE + G +P+ T +L+ GL + EA +L+ ++E K
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Query: 386 FTKNVDTWNEIEAGL 400
++ +N + G+
Sbjct: 473 IEPDIVLYNILIEGM 487
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
V +MD + H+V + N L+ L V + K GI+PD T+N +I
Sbjct: 111 VVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFK-LGIQPDAITFNTLI 169
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + A + EM R+ +P+ S+ ++ G K ++L+ ME G K
Sbjct: 170 NGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCK 229
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y I SLCK +A LL EM+ +G+ P+ VTYS ++GFC G+ EA
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL 289
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + PN+ + +V +CK G A + KG PN T +L+ G
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349
Query: 369 ASKVSEAKELIGLVKEK 385
+++ EA++++ ++ +K
Sbjct: 350 NNQMDEAQKVLDIMVDK 366
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 136/331 (41%), Gaps = 8/331 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+A++ I+ L + N L E+ R PD+ H G N A
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLN---EATIL 289
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + F L+ L E + VF K G +P+ TYN ++ +C
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK-GAEPNAYTYNALMDGYC 348
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A +L M K P S+ L+ G+ K + ++ +L M +
Sbjct: 349 LNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTV 408
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ + LC++ + EA L EM S G+ P+ +TYS + G CK G+ +EA K + M
Sbjct: 409 TYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S + P+ +Y ++ M G E A + A G P T ++ GL
Sbjct: 469 QESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLS 528
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
EA EL + + F N ++N I G Q
Sbjct: 529 DEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R + +P+ FG + K+++Y V + M+ +G+ V N+ I+ LC+L
Sbjct: 83 MLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNH 142
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A ++L +M G++P+++T++ I G C +G +EA + M G P+ Y T
Sbjct: 143 VVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYST 202
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
++ +CK G+ AL ++ KG PN +++ L + V++A +L+ +V
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG 262
Query: 386 FTKNVDTWNEIEAG 399
+V T++ I G
Sbjct: 263 IPPDVVTYSTILHG 276
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N + A + M + V ++N L+ + E K + +E + + P
Sbjct: 347 YCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE-LTP 405
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY+ +++ C+ A ++ EM + P+ ++ L+ G K ++ K+L
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ ++ + +YN+ I + K AK L ++ + G++P TY+ I G K+
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA + +R M + G PNS Y ++ + D TA+ E + K + + +T
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585
Query: 360 KSLV 363
+ L+
Sbjct: 586 QMLL 589
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A M + L ++ +N ++ I D K+ V + G +L TYN
Sbjct: 577 KYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNT 635
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C+S +++SA IL M KP+ S+ L+ GF K K E + M G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I CK K A +LL+ M G +PN TY+ I+G K NF A+
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ ++M G+ PN Y M+ +CK G AL + I +G +PN T SL+ L
Sbjct: 756 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
KV EA+ L GL+ ++ T
Sbjct: 816 GQEGKVEEAENLFAELERHGLIPDEIT 842
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +EM H + + ++AL Y++ R+F++ K G +P++ TY +I
Sbjct: 474 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALI 532
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A + M R + PN ++ AL+ + + + VL +M R G+
Sbjct: 533 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLF 592
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + YN I C L +A +++ ML +G N VTY+ I G+C GN A +
Sbjct: 593 TNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 652
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M + G P+ Y ++ CK E+A G E + G PN T +L+ G
Sbjct: 653 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 712
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
K+ A L+ +K + NV T+N + GL
Sbjct: 713 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ + G KPD +Y +I FC+ S SA+ + EM + PN ++ AL+ G+
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+EK + +L+ M+R G + V YNV IH L K + A+ L M+ +G+ PN V
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I G CK+G+ A + + M G PN Y +++ + + G E A E
Sbjct: 772 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 831
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G +P+ T ++ + KV A +G ++K + T+ + GL
Sbjct: 832 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 13/281 (4%)
Query: 127 EHAVRTFKEMD---EHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKP 179
E RT +D + LR + A++ALL+ L+ A R+ E G++P
Sbjct: 329 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQP 383
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L YN VI A C+ + + A +I+ ++ + P+ ++ +++ G ++ + +V
Sbjct: 384 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 443
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G + Y+ I+ LC + EA L+ EM+ G+ P + T + I C
Sbjct: 444 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 503
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +E+A + + M N G PN Y ++ +C G + A+G G PN T
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563
Query: 360 KSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAG 399
+L+ L ++ A ++ L+ + N+ T+NE+ G
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKG 604
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 2/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K++ E ++ + +++L D +VF + K G +P+ TY+ +I C
Sbjct: 408 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLC 466
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + A+ ++ EM I P A + + YED ++ M+ G + V
Sbjct: 467 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 526
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LC A L M G+ PN+VTY+ I ++ + A +M
Sbjct: 527 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 586
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+GL N Y M+ C GD + A+ + +G N T +++ G +
Sbjct: 587 GRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 646
Query: 373 SEAKELIGLVKEKFTKNVDTWNEIE 397
+ A ++ L+++ K D W+ E
Sbjct: 647 TSALRILDLMRDGGCKP-DEWSYTE 670
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 41/274 (14%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I + + +PD E + I + + + E A F EM + L + + AL+
Sbjct: 652 ILDLMRDGGCKPD---EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 708
Query: 154 ALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
KD K + +E K G +P++ TYN +I + ++ S A + M + I
Sbjct: 709 GY--CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 766
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
PN ++ A++ G LCK + A
Sbjct: 767 FPNVVTYTAMIDG-----------------------------------LCKNGSTSLALE 791
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ ++M+ +G PN +TYS I ++G EEA+ + + GL P+ Y M+
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G E A F I G P T L+ GL
Sbjct: 852 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A +L M + + P+ ++ +L+ + + V + M G + ++ Y I
Sbjct: 953 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 1012
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+LC+L + EA+ + ML + P+ V + I G +DG + +F IM P
Sbjct: 1013 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 1072
Query: 320 NSSVY 324
+ +Y
Sbjct: 1073 SFHIY 1077
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 2/282 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L+ + N T+ A + EM +R S+ FN ++ L K+ K FI +T G+K
Sbjct: 190 LFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKE-FIGHMETLGVK 248
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN +I C A I M K ++P+ ++ + ++G KE + E+ + +
Sbjct: 249 PNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGL 308
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G+ YN I C +A A DEM+SKG+ + VTY+ FI+
Sbjct: 309 ICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFM 368
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +A + M G+ P++ + ++ C+ GD + A G E + KG P T
Sbjct: 369 EGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVT 428
Query: 359 MKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAG 399
SL+ L +++ EA L + +E ++ +N + G
Sbjct: 429 YTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 13/318 (4%)
Query: 77 AFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
F+I IN KL +A F G ++E L +P++ H L G+ + A
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIG---HMETLGVKPNVVTYNTIIHGHCLRGKF---QRAR 271
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F+ M + L +N+ + L +E + + + G+ P+ TYN +I
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG-GLVPNAVTYNALIDG 330
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C D AY+ EM K I + ++ + + E + D + +++ M GM
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+N+ I+ C+ A LLDEM+ KG++P VTY+ IY K +EA +
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFS 450
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ GL P+ V+ ++ C G+ + A KE +P+ T +L+ G
Sbjct: 451 KIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510
Query: 371 KVSEAKELIGLVKEKFTK 388
KV EA++L+ +K + K
Sbjct: 511 KVEEARQLLDEMKRRGIK 528
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G P+++T N+++ F + + + A+ + AEM R +I+ + +F ++ KE K
Sbjct: 173 KEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKL 232
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + + ME G+K V YN IH C K A+ + M KG++P+ TY+ F
Sbjct: 233 KKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSF 292
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK+G EEA M GL PN+ Y ++ C GD + A + E I+KG
Sbjct: 293 ISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGI 352
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + T + L ++ +A +I ++EK
Sbjct: 353 MASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + S+ +N + AL + + + E + G+ PD T+N +I +C
Sbjct: 346 EMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM-REKGMMPDAVTHNILINGYCRC 404
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D+ A+ +L EM K I+P ++ +L+ K + ++ + + +++ G+ + ++
Sbjct: 405 GDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVF 464
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I C A LL EM + + P+ +TY+ + G+C++G EEA++ M
Sbjct: 465 NALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKR 524
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ Y T++ K GD + A E + G+ P T +L+ GL +
Sbjct: 525 RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEH 584
Query: 375 AKELIGLVKEKFTKNV 390
A+EL+ KE +K +
Sbjct: 585 AEELL---KEMVSKGI 597
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 5/228 (2%)
Query: 114 AHSIILYGQANMTEHAVRTFKEMDE---HKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H+I++ G + A R F +DE ++ ++ + +L+ L KE +F +
Sbjct: 393 THNILINGYCRCGD-AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G+ PD+ +N +I C + + A+ +L EMD + P+ ++ L+ G+ +E
Sbjct: 452 IQQE-GLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K E+ ++L M+R G+K YN I K +A + DEM++ G P +TY+
Sbjct: 511 KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYN 570
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
I G CK+ E A++ + M + G++P+ S Y +++ M D E
Sbjct: 571 ALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 155/313 (49%), Gaps = 10/313 (3%)
Query: 68 TPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE 127
T ++ L+R+A + LS + N + + ++ PD N + + +I Y + MT+
Sbjct: 118 TAQNLLERIAVR---DYLSSPSVLNAVVRIHDD----PD-SNSQILSWLVIFYANSRMTQ 169
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A++ F+ M H + + A LL +L A+ V +V+ + + G+ P++ +N +
Sbjct: 170 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV-GVVPNIHIFNVL 228
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A C+S D A +L EM+ + I P+ ++ L++ + K+ + + + MER G+
Sbjct: 229 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 288
Query: 248 KSGVSMYNVRIHSLCK-LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN I+ C+ + EA L + M +G+ P VTY+ + C++G ++A
Sbjct: 289 SPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDAN 348
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ MS + P++ T++ CK GD +A+ K+ + G P+ T K+L+ G
Sbjct: 349 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 408
Query: 367 AGASKVSEAKELI 379
+V AKE +
Sbjct: 409 CKLHEVDSAKEFL 421
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 39/315 (12%)
Query: 112 FHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
HA +++L +A +T + +K+M + ++ FN L+ A + D ++ +++
Sbjct: 187 LHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLN 246
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E + I PDL TYN +I +C+ A I M+R + P+ ++ +L+ GF +E
Sbjct: 247 EMESRF-IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCRE 305
Query: 230 -EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM----------- 277
E+ ++ ++ME G+ GV YN + LC+ K +A LL+EM
Sbjct: 306 VNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVT 365
Query: 278 ------------------------LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
L G+KP+ T+ I+GFCK + AK+F M
Sbjct: 366 CNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 425
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
++G SP+ S Y +V + E + E KG + + ++L+ L K+
Sbjct: 426 DAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 485
Query: 374 EAKELIGLVKEKFTK 388
A+ + L++ K K
Sbjct: 486 SAERIFTLMQGKGMK 500
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 14/281 (4%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSII-LY 120
+ P H+ F++ I+ ++ Q L E+++R PDL F +++I LY
Sbjct: 216 VGVVPNIHI----FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDL----FTYNTLISLY 267
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI-AKDYKEVKRVFIEFPKTYGIKP 179
+ M A+ M+ + + +N+L+ D +E R+ E + G+ P
Sbjct: 268 CKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLR-EVMEVEGLHP 326
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +++ CE A +L EM + ++P+ + L+ + K KV
Sbjct: 327 GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVK 386
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G+K + IH CKL + AK L EML G P+ TYS + +
Sbjct: 387 KKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQ 446
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
N E + +S GL + SVY ++ +CK E+A
Sbjct: 447 DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 487
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 177 IKPDLDTYNRVIKA----FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
I D D+ ++++ + S + A + M KP+ + L+ K
Sbjct: 144 IHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 203
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V KV + M R G+ + ++NV IH+ CK +A+ LL+EM S+ + P+ TY+
Sbjct: 204 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 263
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG-GDYETALGFCKESIAKG 351
I +CK G EA M G+SP+ Y +++Y C+ D E AL + +G
Sbjct: 264 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEG 323
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
P T S++ L K+ +A L+ + E+
Sbjct: 324 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSER 357
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 99 EELKTRPDLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
E L+ R ++ E H ++ Y + + A R EM E K+ N L
Sbjct: 311 EALRLREVMEVEGLHP-GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 369
Query: 152 LLALTIAKDY---KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
+ A D +VK+ +E G+KPD T+ +I FC+ + SA L EM
Sbjct: 370 INAYCKIGDMGSAMKVKKKMLE----AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 425
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
P+ S++ LV +Y ++ E V ++ + R G+ +S+Y I LCK+ K
Sbjct: 426 DAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 485
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
A+ + M KGMK +SV Y+ Y + K G
Sbjct: 486 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAG 517
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 196 DSSSAYSILAEMDRKSIKPNASS--FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D S+ S+L + R P+++S LV + +D +V + M +G K +
Sbjct: 130 DYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHA 189
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
V ++SL K R + +M+ G+ PN ++ I+ CK G+ E+A++ M
Sbjct: 190 CTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME 249
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTG------- 365
+ + P+ Y T++ CK G + ALG ++ + +G V P+ T SL+ G
Sbjct: 250 SRFIFPDLFTYNTLISLYCKKGMHYEALGI-QDRMERGGVSPDIVTYNSLIYGFCREVND 308
Query: 366 LAGASKVSEAKELIGL 381
L A ++ E E+ GL
Sbjct: 309 LEEALRLREVMEVEGL 324
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 3/231 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAV 130
H + ++ + KL E ++ L E+ R ++ + +++I Y + A+
Sbjct: 325 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK-VEPDNVTCNTLINAYCKIGDMGSAM 383
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ K+M E L+ F AL+ + K E G P TY+ ++ +
Sbjct: 384 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA-GFSPSYSTYSWLVDS 442
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + + + + E+ RK + + S + AL+ K +K E ++ +M+ GMK
Sbjct: 443 YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 502
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+Y ++ K K A +LDEM + + Y F + DG+
Sbjct: 503 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGS 553
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 153/330 (46%), Gaps = 6/330 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A ++ + + + E+ R +++I Y N + E
Sbjct: 212 DIVSYNAVLKGLCMAKRWDDVEELMVEM-VRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+M EH + + ++ I KD + EV + +YG+KP++ YN V+K
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDG--ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A +LAEM ++ + +F LV F + + V ++L+ M +G V
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I+ CK EA LL M + G KPN+++Y+ + G C+ + +A++
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G PN + T++ FMCK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ ++ + T N ++ + + L
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASAL 538
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 147/374 (39%), Gaps = 75/374 (20%)
Query: 78 FSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
F+ I L F + + L ++ PDL R +A I + E A
Sbjct: 251 FNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL---RMYATIIDGICKDGHHEVANDILS 307
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKE------------------------------- 163
M + L+ +V +N +L L A+ ++E
Sbjct: 308 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNG 367
Query: 164 -VKRV--FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
V RV +E +G PD+ TY VI FC+ A +L M KPN S+
Sbjct: 368 LVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYT 427
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ G + E++ D +++ M + G +N I+ +CK +A LL +ML
Sbjct: 428 IVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVN 487
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM------------- 327
G P+ ++YS I G K G EEA + +M N G++PN+ +Y +M
Sbjct: 488 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKI 547
Query: 328 ----------------------VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +CK + + A+ F ++ G +PN +T L+ G
Sbjct: 548 IQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRG 607
Query: 366 LAGASKVSEAKELI 379
LA V EA++L+
Sbjct: 608 LASEGLVREAQDLL 621
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D N V+ A CE +L ++ +P+ S+ A++ G ++++DV
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M R G V+ +N I LC+ + L +M G P+ Y+ I G
Sbjct: 233 EELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDG 292
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
CKDG+ E A M + GL PN Y T++ +C +E A
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEA 337
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++A C SA L + K ++ + +V+ ++ ++ ++L+ + +G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN + LC ++ + + L+ EM+ G PN T++ I C++G FE+
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G +P+ +Y T++ +CK G +E A + G PN +++ GL
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328
Query: 367 AGASKVSEAKELI 379
A + EA++L+
Sbjct: 329 CSAERWEEAEDLL 341
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 7/213 (3%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I++ C + ++ A L D ++ A++AG+ + + V ++
Sbjct: 50 LIRSLCAAGRTADAARAL---DTAGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAAVP 103
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y + SLC A+A +LDEM +G + C+ G F A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +++ G + +S +V +C+ G + + ++ + G P+ + +++ GL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 367 AGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEA 398
A + + +EL + +V+ NV T+N + A
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIA 256
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A+ F E ++ + +N+L+ L + +V E + G PD+ TYN
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYN 399
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI C+ + S A ++ + K P+ +F L+ G+ K K + ++++ M Y
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN ++ LCK K E EM+ KG PN +TY+ I FC+ EEA
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K MS GL P++ + T++Y C+ GD E A ++ KG+ T +L+
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579
Query: 366 LAGASKVSEAKEL 378
+G + A+++
Sbjct: 580 FSGKLNMHMAEKI 592
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 137/324 (42%), Gaps = 40/324 (12%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+ SI Y +A AV F+ MD + A+NA++ AL A + + +V++
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G+ PDL T+ +++FC ++ A +L + + A ++ +V G Y
Sbjct: 112 LAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 166
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK-------- 283
D ++ M + ++ +N +H+LCK EA LL +++ +GM
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226
Query: 284 --------------------------PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
P+ VTY+ I G CK +EA + R M N G
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ CK + A K+++ KG+VP+ T SL+ GL V A E
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 378 LIGLVKEKFTK-NVDTWNEIEAGL 400
L + K K ++ +N + GL
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGL 370
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C D A + E K IKP+ + +LV G +
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V+ M G + YN+ I+ LCK+ ++A ++++ + KG P+ T++ I G
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M G++P++ Y +++ +CK G +E I KG PN
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ ++K+ EA ++I
Sbjct: 500 PITYNILIENFCRSNKMEEASKVI 523
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N + L A E R ++ + Y + PD+ TYN +I+ C+ S A L M
Sbjct: 224 YNIWIRGLCEAGRLPEAVR-LVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P+ ++ ++ G+ K ++ ++L+ G Y I+ LC
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A L +E +KG+KP+ V Y+ + G C G A + M+ G P+ Y +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KF 386
+ +CK G+ A ++I KG++P+ T +L+ G K+ A +L+ + E
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461
Query: 387 TKNVDTWNEIEAGL 400
+ T+N + GL
Sbjct: 462 APDTITYNSVLNGL 475
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YGI PD TYN V+ C++ + EM K PN ++ L+ F + K E+
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+KV+ M + G+ +N I+ C+ A L ++ KG + T++ I
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 578
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
F N A+K + M + G +S Y ++ CK + + A E I KG++P
Sbjct: 579 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ +T ++ L +V +A +I ++
Sbjct: 639 SMSTFGRVINSLTVNHRVFQAVGIIHIM 666
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ + M E+ + +N++L L A EV F E G P+ TYN
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM-ILKGCHPNPITYNI 505
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ FC S+ A ++ +M ++ + P+A SF L+ GF + E + Q +E G
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N I + A+ + DEMLSKG + +S TY I G CK N + A
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
M G P+ S + ++ + A+G + G VP
Sbjct: 626 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 9/328 (2%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDL--QNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+ N L +A G + + L PD +N+ + + L G+ M E F + +
Sbjct: 99 SCNALFDALVDAGAVKAAKSLLEYPDFVPKNDSLEGY-VRLLGENGMVEEVFDVFVSLKK 157
Query: 139 HKLRHSVGAFNALLLA-LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
S +FN LLA L + + K + G+ D++T +IKAFC +
Sbjct: 158 VGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKV 217
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ Y +L ++ K + + + F AL+ GF K+++Y+ V+++L +M MK S+Y +
Sbjct: 218 FNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIM--IAMKCNPSIYTYQ 275
Query: 258 --IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I+ L K RK EA + +++ +G P+ V Y+ I GFC G EA+K + M
Sbjct: 276 EIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQK 335
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL PN Y M+Y CK D+ A + +G+ N + ++++GL K EA
Sbjct: 336 GLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEA 395
Query: 376 KELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
L + ++ +++ ++N + GL Q
Sbjct: 396 LSLFHEMSRKGIARDLISYNSLIKGLCQ 423
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 149/321 (46%), Gaps = 23/321 (7%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYG--QANMTE 127
+D F+ IN + ++ +S+ L +K P + + + I+ G + +
Sbjct: 234 VDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSI-----YTYQEIINGLLKRRKND 288
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY------KEVKRVFIEFPKTYGIKPDL 181
A R F ++ + G F ++ T+ K + E ++++ E + G+ P+
Sbjct: 289 EAFRVFNDLKDR------GYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQK-GLVPNE 341
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I +C+ D + A + +M + N S+ +++G Y K ++ +
Sbjct: 342 YTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHE 401
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G+ + YN I LC+ + A+A LL+++L +G++P+ +++ I CK G+
Sbjct: 402 MSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGD 461
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A + + M + L P +S + M+ + K GD+ + + + ++ PN T +
Sbjct: 462 TEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEH 521
Query: 362 LVTGLAGASKVSEAKELIGLV 382
L+ L +++ + ++ L+
Sbjct: 522 LIDCLKRENRLDDILIVLDLM 542
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 2/262 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M K S+ + ++ L + E RVF + K G PD Y VIK FC+
Sbjct: 262 MIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDL-KDRGYFPDRVMYTTVIKGFCDMG 320
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A + EM +K + PN ++ ++ G+ K + + K+ M G V Y+
Sbjct: 321 LLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYS 380
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I L K EA +L EM KG+ + ++Y+ I G C++G +A +
Sbjct: 381 TMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQ 440
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ S + ++ +CK GD E A+ K+ + P +T ++ GL+ ++
Sbjct: 441 GLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQG 500
Query: 376 KE-LIGLVKEKFTKNVDTWNEI 396
E L+ ++ K N+ T+ +
Sbjct: 501 MEWLLKMLSWKLKPNMQTFEHL 522
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 40/255 (15%)
Query: 176 GIKPDLDTYNRVIKA------------------FCESSDSSSAY--------------SI 203
G KPD + N + A F +DS Y +
Sbjct: 92 GFKPDQSSCNALFDALVDAGAVKAAKSLLEYPDFVPKNDSLEGYVRLLGENGMVEEVFDV 151
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV--RIHSL 261
+ + P+ASSF + K + + V K+ ++M G+ + + V I +
Sbjct: 152 FVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAF 211
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C K LL ++L KG+ ++ ++ I GFCK ++ + IM +P+
Sbjct: 212 CAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSI 271
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-- 379
Y ++ + K + A + +G+ P+ +++ G ++EA++L
Sbjct: 272 YTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFE 331
Query: 380 ----GLVKEKFTKNV 390
GLV ++T NV
Sbjct: 332 MIQKGLVPNEYTYNV 346
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 57/200 (28%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDL 181
T+ A+ F EM + + ++N+L+ L +AK + ++ I+ G++P +
Sbjct: 392 TDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQ-----GLEPSV 446
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEM-DRK------------------------------ 210
++ +IK C+ D+ A +L +M DR
Sbjct: 447 SSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLK 506
Query: 211 ----SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC-KLR 265
+KPN +F L+ +E + +D+ VL +M R G + S RI SL K
Sbjct: 507 MLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLEKS----RICSLVTKFS 562
Query: 266 K--------CAEAKALLDEM 277
K C E K +L EM
Sbjct: 563 KKNFPFPHLCLEEKPVLSEM 582
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ +M E A++ F +M ++ + N LL +KR F + G KP +
Sbjct: 75 EEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGA-GSKPTV 133
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I C+ D +A + EM + + P+ ++ +++ G+ K + +D +
Sbjct: 134 FTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ + V YN I+ CK K + EM G+KPN V+YS + FCK+
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A KFY M GL PN Y ++V CK G+ A E G N T +
Sbjct: 254 MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ GL ++ EA+EL G +V N+ ++ + G
Sbjct: 314 LIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGF 353
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 11/267 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDL 181
E A F+EM L +N+++ Y +V R+ F E K+ +PD+
Sbjct: 150 EAASGLFEEMKFRGLIPDTVTYNSMI------DGYGKVGRLDDTVYFFEEMKSMSCEPDV 203
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC+ EM + +KPN S+ LV F KE+ + K
Sbjct: 204 ITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVD 263
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G+ Y + + CK+ ++A L DEM G++ N VTY+ I G C
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA++ + M +G+ PN + Y +++ K + + AL E +G P+ +
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTK 388
+ L G K+ AK ++ ++EK K
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIK 410
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 4/287 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++I I+ + + S EE+K R + + + I YG+ + V F+E
Sbjct: 134 FTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M V +N L+ + F E K G+KP++ +Y+ ++ AFC+
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM-KQSGLKPNVVSYSTLVDAFCKED 252
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +M R + PN ++ +LV + K D ++ M + G++ V Y
Sbjct: 253 MMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYT 312
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I LC + + EA+ L +M++ G+ PN +Y+ I+GF K N + A + M
Sbjct: 313 ALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN---FTTM 359
G+ P+ +Y T ++ +C E A E KG N +TT+
Sbjct: 373 GIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTL 419
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + +M + A++ + +M L + + +L+ A + + R+ E + G++
Sbjct: 248 FCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV-GVEW 306
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY +I C+ A + +M + PN +S+ AL+ GF K + + ++L
Sbjct: 307 NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS------------- 286
M+ G+K + +Y I SLC L K AK +++EM KG+K N+
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS 426
Query: 287 ----------------------VTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSV 323
VT+ I G CK+ +A ++ RI ++ GL N+++
Sbjct: 427 ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAI 486
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y M+ +CK E A ++ KG VP+ T SL+ G V +A L
Sbjct: 487 YTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALAL 541
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ + + + EE+K+ PD+ + +G+ +
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGK---LPKGL 223
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F+EM + L+ +V +++ L+ A ++ + +++ + G+ P+ TY ++ A
Sbjct: 224 EFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDM-RRLGLVPNEHTYTSLVDA 282
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C+ + S A+ + EM + ++ N ++ AL+ G E+ ++ ++ M G+
Sbjct: 283 YCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPN 342
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
++ Y IH K + A LLDEM +G+KP+ + Y FI+ C E AK
Sbjct: 343 LASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMN 402
Query: 311 IMSNSGLSPNSSVYFTMV--YF 330
M G+ N+ +Y T++ YF
Sbjct: 403 EMQEKGIKANTFIYTTLMDAYF 424
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 25/286 (8%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-------------FPKTYGIK---- 178
M+ + +H++ ++ + L A+ Y + R+ E F + +
Sbjct: 1 MNRNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCV 60
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P ++ + E A ++M R + P S L+ F + K + + +
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G K V YN+ I +CK A L +EM +G+ P++VTY+ I G+ K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G ++ F+ M + P+ Y T++ CK G L F +E G PN +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 359 MKSLVTGLAGASKVSEAKEL------IGLV--KEKFTKNVDTWNEI 396
+LV + +A + +GLV + +T VD + +I
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKI 286
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 37/210 (17%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
++ ++ AL+ AK+ + E K GIKPDL Y I + C +A +
Sbjct: 342 NLASYTALIHGFVKAKNMDRALELLDEM-KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEE--------------------------------K 231
+ EM K IK N + L+ ++K E K
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCK 460
Query: 232 YEDVNKVLQMMER----YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ V+K + R +G+++ ++Y I LCK + A L ++M KG+ P+
Sbjct: 461 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRT 520
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
Y+ I G K GN +A M+ G+
Sbjct: 521 AYTSLIDGKLKQGNVVQALALRDKMAEIGV 550
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ A + E VF + + +G+ P++ TY VI C+S A +
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M + + PN + +L+ +K++ + +L+M++R G+ +N IHS CK
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFNSIIHSHCKEG 490
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ E++ L D M+ G+KPN +TYS I G+C G +EA K M + G+ P+ Y
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKE 384
T++ C+ + AL KE ++ G PN T ++ GL + + AKEL +G+ K
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610
Query: 385 KFTKNVDTWNEIEAGL 400
+ T+N I GL
Sbjct: 611 GTQLELSTYNIILHGL 626
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F M + L + + LL E+ ++ GI PD +N +I
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HALLDLMVRNGIHPDHHVFNILI 378
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A+ + A + ++M + + PN ++GA++ K +D + M G+
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +Y IHSLC K +A+ L+ EML +G+ N++ ++ I+ CK+G E++K
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +M G+ PN Y T++ C G + A + G P+ T +L+ G
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
S++ +A L +V + N+ T+N I GL
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 173/368 (47%), Gaps = 19/368 (5%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL-SEANYFNGI 94
L +++++ AL LL ++ R P D ++++ IN E +
Sbjct: 168 LCDENRSQEALELLHMMADD-------RGGGSAP----DVVSYTTVINGFFKEGDSDKAY 216
Query: 95 SQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
S Y E L R PD+ ++ I + + A+ M ++ + + +N++L
Sbjct: 217 STYHEMLDRRISPDVVT---YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
++ KE F++ ++ G++PD+ TYN ++ C++ S+ A I M ++ +
Sbjct: 274 HGYCSSEQPKEAIG-FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ +++ L+ G+ + +++ +L +M R G+ ++N+ I + K K EA
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ +M G+ PN VTY I CK G+ ++A ++ M + GL+PN VY ++++ +C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVD 391
++ A E + +G N S++ +V E+++L L V+ NV
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 392 TWNEIEAG 399
T++ + G
Sbjct: 513 TYSTLIDG 520
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 7/280 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ F++M + L ++ + +L+ +L I + + + + +E GI + +N
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFN 480
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I + C+ + + M R +KPN ++ L+ G+ K ++ K+L M
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
GMK YN I+ C++ + +A AL EM+S G+ PN +TY+ + G A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+ Y ++ SG S Y +++ +CK + AL + T ++
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660
Query: 366 LAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
L + EAK+L GLV + T ++ N IE G
Sbjct: 661 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 3/238 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F LL L K + + + PD+ + ++K C+ + S A +L M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184
Query: 208 --DR-KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
DR P+ S+ ++ GF+KE + M + V Y+ I +LCK
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A +L M+ G+ PN +TY+ ++G+C +EA F + M + G+ P+ Y
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+++ ++CK G A +G P+ T +L+ G A + E L+ L+
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 94/221 (42%), Gaps = 1/221 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + A + M ++ +N L+ + +F E + G+ P
Sbjct: 521 YCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSP 579
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN +++ + +++A + + + + S++ ++ G K ++ ++
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q + ++ +N+ I +L K+ + EAK L + + G+ P+ TYS +
Sbjct: 640 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 699
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G EE + M +G + NS + ++V + + GD A
Sbjct: 700 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P TYN +I C++ +S AY +L EM P+ ++ L+ GF K +K +D +V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSVTYSHFIYGFC 297
+ + G + V Y+ I LCK + EA L M+ G PN+VTY+ I GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ G +EA M+ +G SP+ Y T++ CK + A + KG PN
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T SL+ GL +++S+A ++G ++ K + V T+N I G
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 134/314 (42%), Gaps = 2/314 (0%)
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
C AA E + ++ I+ L +A + LEE+ + + + I +
Sbjct: 41 CGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 100
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ ++ A+R F+++ R V ++ L+ L KE +F K+ P+
Sbjct: 101 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 160
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC A ++L M P+ ++ L+ GF K + +D +L
Sbjct: 161 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 220
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G+ V + + LC+ + ++A +L EM K P TY+ + G+C+
Sbjct: 221 MTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQ 280
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EEA+KF ++ PN + M+ +CK A+ +E+ + P+ +
Sbjct: 281 LEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 338
Query: 362 LVTGLAGASKVSEA 375
++ L KV EA
Sbjct: 339 VIDVLCREKKVDEA 352
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 11/258 (4%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N+L+ L A+ E + E + G PD+ TY +I FC+S S A + ++
Sbjct: 57 YNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM-----YNVRIHSLC 262
+ +P+ ++ L+ G KE + ++ + M +KSG M YN I C
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM----IKSGSCMPNTVTYNSLISGFC 171
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
++ K EA LL+ M G P+ VTY+ + GFCK ++A M+ GL+PN
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ +++ +C+ A+ E K P T +++ G +++ EA++ + L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM-LE 290
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ NV ++N + GL
Sbjct: 291 EMDCPPNVVSFNIMIRGL 308
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ L+ +K + RVF + G +PD+ TY+ +I C+ A + M
Sbjct: 92 YTTLITGFCKSKKSDDALRVFEQL-VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 150
Query: 208 DRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ S PN ++ +L++GF + K ++ +L+ M G V Y ++ CKL +
Sbjct: 151 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 210
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A LL++M KG+ PN VT++ + G C++ +A M SP Y T
Sbjct: 211 LDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 270
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ C+ E A F E + PN + ++ GL ++ SEA EL+
Sbjct: 271 ILDGYCRVNQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELV 321
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ T+ ++ C + S A IL EM RKS P ++ ++ G+ + + E+
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K M+E V +N+ I LCK+ + +EA L++E + P+ V Y+ I
Sbjct: 285 RKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342
Query: 296 FCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYF 330
C++ +EA + YR ++ G PNS Y T Y+
Sbjct: 343 LCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDYW 378
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 152/374 (40%), Gaps = 57/374 (15%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFN-GISQYLEELKTRPDLQNER 111
N +KIL P D +S IN L N ++ + E + E+
Sbjct: 338 QNADKILRDAMFKGFIP----DEFTYSSLINGLCNDGDMNRAMAVFYEAM--------EK 385
Query: 112 FHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
HSIILY + + A++ K+M EH + +N ++ L +
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ + G PD+ T+N +I +C+ + A IL M I P+ ++ L+
Sbjct: 446 NGILND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G K K ++V + M G + YN+ I S CK RK +EA L EM ++G+ P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 285 NSVTYSHFIYGFCKDG------------------------------------NFEEAKKF 308
+ VT I G C +G N A+K
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKL 624
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M S +P++ Y M+ CK G+ + A F E+I+KG VP+FTT ++ L
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684
Query: 369 ASKVSEAKELIGLV 382
++SEA +I L+
Sbjct: 685 THRLSEAVVIINLM 698
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 156/333 (46%), Gaps = 18/333 (5%)
Query: 77 AFSIAINKLSEANYF---NGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+++ +N L E YF + + ++++ PD+ S + G+ A+R
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTA---ALRLL 169
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M FNA+ I+ YKE ++ F E K GI PD+ T+N++I
Sbjct: 170 NNMPGQGCE-----FNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ-GICPDILTFNKLI 223
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + + + +++ ++ + PN +F + G ++ ++ ++L+ + G+
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I CK K EA+ L +M++ G++PN TY+ I GFCK G + A K
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R G P+ Y +++ +C GD A+ E++ KG+ + +LV GL+
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
V +A +L+ +++ + ++ T+N + GL
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY+ +I C D + A ++ E K K + + LV G K+
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++++ M +G + YN+ ++ LCK+ ++A +L++ ++KG P+ T++ I G
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK N ++A + M + G++P+ Y T++ +CK + + K + KG PN
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T L+ KVSEA EL +K + T ++ T + GL
Sbjct: 531 IITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN + L E R+ +E + G+ PD+ +YN +I FC+ S A L +
Sbjct: 253 TFNIFIQGLCRKGAIDEAARL-LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M ++PN ++ ++ GF K ++ +K+L+ G Y+ I+ LC
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A A+ E + KG K + + Y+ + G K G +A + + M G SP+ Y
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
+V +CK G A G ++IAKG +P+ T +L+ G + +A E++ ++
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 386 FTKNVDTWNEIEAGL 400
T +V T+N + GL
Sbjct: 492 ITPDVITYNTLLNGL 506
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 5/330 (1%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++LE + LTP D ++++ I + + YL ++ NE +
Sbjct: 272 RLLESIVSEGLTP----DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + +A M ++A + ++ +++L+ L D VF E + G
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-G 386
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
K + YN ++K + A ++ +M P+ ++ +V G K D N
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L G + +N I CK R +A +LD MLS G+ P+ +TY+ + G
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK + ++ M G +PN Y ++ CK A+ KE +G P+
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
T+ +L+ GL ++ +A EL +++++
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEY 596
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 129/290 (44%), Gaps = 4/290 (1%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMD-EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
H ++I Y N +A++ F ++ E +H++ + ++ L + ++ ++ V E
Sbjct: 9 HVAAVIRY--QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K K Y +++ + A ++ MD +P+ S+ A++ +
Sbjct: 67 RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ +KV M+ G+ V + +R+ S C + A LL+ M +G + N+V+Y
Sbjct: 127 FSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCA 186
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GF K+ EA + M G+ P+ + +++ +CK G+ + + + + +G
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
PN T + GL + EA L+ +V E T +V ++N + G
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGF 296
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ A + E VF + + +G+ P++ TY VI C+S A +
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M + + PN + +L+ +K++ + +L+M++R G+ +N IHS CK
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFNSIIHSHCKEG 490
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ E++ L D M+ G+KPN +TYS I G+C G +EA K M + G+ P+ Y
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKE 384
T++ C+ + AL KE ++ G PN T ++ GL + + AKEL +G+ K
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610
Query: 385 KFTKNVDTWNEIEAGL 400
+ T+N I GL
Sbjct: 611 GTQLELSTYNIILHGL 626
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F M + L + + LL E+ ++ GI PD +N +I
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HALLDLMVRNGIHPDHHVFNILI 378
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A+ + A + ++M + + PN ++GA++ K +D + M G+
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +Y IHSLC K +A+ L+ EML +G+ N++ ++ I+ CK+G E++K
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +M G+ PN Y T++ C G + A + G P+ T +L+ G
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
S++ +A L +V + N+ T+N I GL
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 173/368 (47%), Gaps = 19/368 (5%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL-SEANYFNGI 94
L +++++ AL LL ++ R P D ++++ IN E +
Sbjct: 168 LCDENRSQEALELLHMMADD-------RGGGSAP----DVVSYTTVINGFFKEGDSDKAY 216
Query: 95 SQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
S Y E L R PD+ ++ I + + A+ M ++ + + +N++L
Sbjct: 217 STYHEMLDRRISPDVVT---YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
++ KE F++ ++ G++PD+ TYN ++ C++ S+ A I M ++ +
Sbjct: 274 HGYCSSEQPKEAIG-FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ +++ L+ G+ + +++ +L +M R G+ ++N+ I + K K EA
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ +M G+ PN VTY I CK G+ ++A ++ M + GL+PN VY ++++ +C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVD 391
++ A E + +G N S++ +V E+++L L V+ NV
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 392 TWNEIEAG 399
T++ + G
Sbjct: 513 TYSTLIDG 520
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ F++M + L ++ + +L+ +L I + + + + +E GI + +N
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFN 480
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I + C+ + + M R +KPN ++ L+ G+ K ++ K+L M
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
GMK YN I+ C++ + +A AL EM+S G+ PN +TY+ + G A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+ Y ++ SG S Y +++ +CK + AL + T ++
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660
Query: 366 LAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGL 400
L + EAK+L GLV +T + N I GL
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 3/238 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F LL L K + + + PD+ + ++K C+ + S A +L M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184
Query: 208 --DR-KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
DR P+ S+ ++ GF+KE + M + V Y+ I +LCK
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A +L M+ G+ PN +TY+ ++G+C +EA F + M + G+ P+ Y
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+++ ++CK G A +G P+ T +L+ G A + E L+ L+
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 92/221 (41%), Gaps = 1/221 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + A + M ++ +N L+ + +F E + G+ P
Sbjct: 521 YCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSP 579
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN +++ + +++A + + + + S++ ++ G K ++ ++
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q + ++ +N+ I +L K+ + EAK L S G+ PN TY
Sbjct: 640 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G EE + + M ++G + +S + +V + + G+ A
Sbjct: 700 GLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N + AV M E L +V +N ++ L +D +F K GI
Sbjct: 695 FCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK-GIVA 753
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN +I C S + A +L +M ++ I PN F AL+ F KE + +
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + + YN I+ C + +AK + D M+SKG P+ VTY+ I GFCK
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKS 873
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K + M++ GL ++ Y T+++ C+ G A + G P+ T
Sbjct: 874 KRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTY 933
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ L K+ +A ++ L K + ++ T+N I G+
Sbjct: 934 NILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F EM + + SV F LL A+ + Y+ V F + + +GI DL ++
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVI-YFSQQMELFGISHDLYSFTI 105
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A SIL +M + P+ +FG+L+ GF + D ++ M + G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSVTYSHFIYGFCKDGNFEEA 305
+ V +YN I LCK A LL+EM KG + + VTY+ + G C G + +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ R M+ ++P+ + ++ K G+ + A K+ + PN T SL+ G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285
Query: 366 LAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
L ++ AK+ L+ K NV T+N + G
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGF 321
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F EM + + S+ F +L A+ + V +F + + GI DL ++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM-ENLGISHDLYSFTI 655
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + G+L+ GF + ++++ ++ M G
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V +YN I+ LCK R A + M KG+ ++VTY+ I G C G + +A
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ R M + PN + ++ K G+ A KE I + PN T SL+ G
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835
Query: 367 AGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
++ +AK + L+ K +V T+N + G
Sbjct: 836 CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 132/309 (42%), Gaps = 8/309 (2%)
Query: 97 YLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
+ E L++RP F + + N + + F +M+ + H + +F L+
Sbjct: 603 FCEMLQSRPIPSIVDF-TRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFC 661
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
+ + + K G +P + T ++ FC+ + A S++ M ++PN
Sbjct: 662 RCSRFSLALALLGKMMK-LGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNV 720
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
+ ++ G K + ++ ME+ G+ + YN I LC + +A LL +
Sbjct: 721 VIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRD 780
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ + + PN + ++ I F K+GN EAK Y+ M + PN Y +++ C G
Sbjct: 781 MVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGR 840
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
A ++KG P+ T +L+TG + +V + +L GLV + FT N
Sbjct: 841 LGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNT 900
Query: 391 DTWNEIEAG 399
+AG
Sbjct: 901 LIHGYCQAG 909
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +N L+ L D + E K + DL TYN ++ C S + A I
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M ++ I P+ +F AL+ F K+ ++ ++ + M + + YN I+ LC
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCM 288
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ AK D M SKG PN VTY+ I GFCK E+ K ++ M GL ++
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y T+++ C+ G A ++ G P+ T L+ GL ++ A
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 3/259 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
A R ++M + ++ V F AL+ A + E + ++ + ++ I P+ TYN
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS-SIGPNTVTYNS 281
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C A M K PN ++ L+ GF K + ED K+ Q M R G
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG 341
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN IH C++ K AK + M+S G+ P+ +T+ ++G C +G A
Sbjct: 342 LVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM 401
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTG 365
+ M + Y M++ +CK E A FC+ + +G P+ T ++ G
Sbjct: 402 VKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV-EGVKPDARTYTIMILG 460
Query: 366 LAGASKVSEAKELIGLVKE 384
L EA EL +KE
Sbjct: 461 LCKNGPRREADELFRRMKE 479
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 125/282 (44%), Gaps = 1/282 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ L + + ++ L ++ R N F I + + A +
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM + ++ +N+L+ I + K +F + + G PD+ TYN +I FC+
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF-DLMVSKGCFPDVVTYNTLITGFCK 872
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + EM + + +A ++ L+ G+ + K KV M G+ +
Sbjct: 873 SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LC K +A +++++ M + +TY+ I G C++ +EA +R ++
Sbjct: 933 YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
G+ ++ Y TM+ +C+ G A C G++P+
Sbjct: 993 RKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 148/343 (43%), Gaps = 10/343 (2%)
Query: 39 KDKTRAA-LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIA-INKLSEANYFNGISQ 96
++K R L ++ E + LE+ ++ L RL +IA + + YF SQ
Sbjct: 33 REKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYF---SQ 89
Query: 97 YLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
+E DL + H + + + A+ +M + S+ F +LL
Sbjct: 90 QMELFGISHDLYSFTILIHC---FCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFC 146
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPN 215
+ + + K+ G +P++ YN +I C++ D + A +L EM++K + +
Sbjct: 147 LRNRIHDAFSLVASMVKS-GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAAD 205
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G ++ ++L+ M + + V + I + K EA+ L
Sbjct: 206 LVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYK 265
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ML + PN+VTY+ I G C G AKK + +M++ G PN Y T++ CK
Sbjct: 266 QMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSR 325
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E + + +G V + T +L+ G K+ AK++
Sbjct: 326 RVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + K+ +V F AL+ + E K ++ E + + P++ TYN +I
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR-SVHPNILTYNSLI 832
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K P+ ++ L+ GF K ++ ED K+ M G+
Sbjct: 833 NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN IH C+ K A+ + + M+ G+ P+ VTY+ + C +G E+A
Sbjct: 893 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVM 952
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + + + Y ++ MC+ + A + KG + ++++GL
Sbjct: 953 VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012
Query: 369 ASKVSEAKELIGLVKE 384
EA +L +KE
Sbjct: 1013 NGLRREADKLCTRMKE 1028
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F S A + EM + P+ F L+ +YE V Q ME +G+
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ + + IH C+ + + A ++L +M+ G P+ VT+ ++GFC +A
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG-WVPNFTTMKSLVTGLAG 368
M SG PN VY T++ +CK GD AL E KG + T +L+TGL
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ + +A ++ + K + +V T+ +
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTAL 247
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 37/231 (16%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q N+ E A +K+M + + + +N+L+ L + K+ F + + G P++
Sbjct: 254 QGNLDE-AQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF-DLMASKGCFPNV 311
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC+S + M R+ + + ++ L+ G+ + K +
Sbjct: 312 VTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSW 371
Query: 242 MERYG------------------------------MKSG-----VSMYNVRIHSLCKLRK 266
M G M+SG + YN+ IH LCK K
Sbjct: 372 MVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADK 431
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
EA L + +G+KP++ TY+ I G CK+G EA + +R M G+
Sbjct: 432 VEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +N L+ +K ++ ++F E G+ D TYN +I +C++ + A +
Sbjct: 860 VVTYNTLITGFCKSKRVEDGMKLFCEMTHQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M + P+ ++ L+ K E +++ +++ M + YN+ I +C+
Sbjct: 919 NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRN 978
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA L + KG+K +++ Y I G C++G EA K M G P+ +Y
Sbjct: 979 DKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 130/369 (35%), Gaps = 68/369 (18%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNAL 151
I ++ PD+ H I+L+G E A+ F +M + + A+N +
Sbjct: 368 IFSWMVSCGVTPDII-----THCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM 422
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF-------------------- 191
+ L A +E +F P G+KPD TY +I
Sbjct: 423 IHGLCKADKVEEAWELFCRLP-VEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481
Query: 192 --CESSDS-----------SSAYSILAEMDRKSIKPNA------------SSFGALVAGF 226
C++ D S I+ R+SI + SS L+
Sbjct: 482 IICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIA 541
Query: 227 YKEEKYEDVNKVLQMMERYGMK-----SGVSM---------YNVRIHSLCKLRKCAEAKA 272
V + L ++ER SG S Y R+ S K +A
Sbjct: 542 SSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFG 601
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L EML P+ V ++ + K F+ + M N G+S + + +++ C
Sbjct: 602 LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFC 661
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVD 391
+ + AL + + G+ P+ T+ SL+ G ++ EA L+ + E NV
Sbjct: 662 RCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVV 721
Query: 392 TWNEIEAGL 400
+N + GL
Sbjct: 722 IYNTVINGL 730
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKDYKEVKRVFIEFPK 173
I +Y + +M E + F +M + +L V N +L L + EV R EF
Sbjct: 171 IWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF-- 228
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
GIKP + TYN ++ ++C+ +L+EM R+ PN ++ L+ G K+ ++E
Sbjct: 229 --GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
++ M + G+K YN I+ AEA +L +EM+ KG P TY+ FI
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFI 346
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
YG CK G +A + M + L P+ Y T++Y C+ G+ A E +
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
P T +L+ GL ++ A++L + ++ E ++ T+ + G
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 9/277 (3%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++ ++YG + A F E+ L ++ +N LL L + + +++ +E
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
GI PD+ TY ++ C+ S A EM + ++ ++ ++ + G E K
Sbjct: 436 INE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG---ELK 491
Query: 232 YEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D ++ + E G + +YNV + LCKL EA LL +M+S G+ P+ VT
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I+ ++G + ++ + M + GL+P+ Y +++ G E A + E
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
KG +PN T SL+ GL ++ +A + EK
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 36/295 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + EM + +N L+ L+ ++++ K + E KT G+K
Sbjct: 244 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT-GLKV 302
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
TYN +I + + A S+ EM K P +++ + + G K + D + L
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD------------------------ 275
M + V YN I+ C+L +A L D
Sbjct: 363 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 276 -----------EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EM+++G+ P+ VTY+ + G CK G+ A++F+ M + GL +S Y
Sbjct: 423 GELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAY 482
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
T + K GD A +E +AKG+ P+ +V GL + EA EL+
Sbjct: 483 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL YN V+ C+ + A +L +M + P+ ++ +++ + +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ V Y V IH + A EM KG+ PN +TY+ I G
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK ++A F+ M G+ PN Y ++ C G+++ AL K+ + +G P+
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLV 382
T +L+ L K+ ++L L+
Sbjct: 689 SCTHSALLKQLGKDCKLQAVRQLESLL 715
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 148/364 (40%), Gaps = 43/364 (11%)
Query: 76 LAFSIAINKLSEANYFNGISQYL-EELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRT 132
+ +++ IN LS+ F + E LKT + + ++ ++YG N M A+
Sbjct: 270 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSA---YTYNPLIYGYFNKGMLAEALSL 326
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM +V +N+ + L + + + + PD+ +YN +I +C
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN-NLLPDVVSYNTLIYGYC 385
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ + E+ + P ++ L+ G ++ + E ++ M G+ +
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEML---------------------------------- 278
Y + ++ CK+ + A+ DEML
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505
Query: 279 -SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+KG P+ + Y+ + G CK GN EEA + + M + G+ P+ Y ++++ + G
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
E ++KG P+ T L+ G AG ++ A ++EK NV T+N +
Sbjct: 566 RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSL 625
Query: 397 EAGL 400
GL
Sbjct: 626 INGL 629
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + + S S+ +M + + P+ + ++ ++ +V + M +G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN + S CK K + LL EM +G PN VTY+ I G K G FE+AK
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M +GL ++ Y ++Y G AL +E + KG P T S + GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
Query: 367 AGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAG 399
++S+A ++L ++ +V ++N + G
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYG 383
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 160/335 (47%), Gaps = 12/335 (3%)
Query: 72 HLDRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMT 126
+D+++++ +N K+ E + + +E+ TRP++ ++ I+ G + +
Sbjct: 112 QMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVV-----MYNTIIDGLCKDKLV 166
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
A + EMD + +V ++ L+ +A E + E I P++ TY
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI-LKNINPNVYTYTI 225
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ A C+ A ++LA M ++ +KPN S+ L+ G+ + ++ ++ M + G
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN+ I LCK ++ EA LL E+L K M PN+VTYS I GFCK G A
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + G + Y +++ +CK + + A + +G PN T +L+ GL
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ A++L L+ + NV T+N + +GL
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGL 440
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN ++ +L K Y +F + + GI+PDL T N +I FC + ++++L ++
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQM-QVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKI 71
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKL 264
+ +PN + L+ G + +V K L ++ G + Y ++ LCK+
Sbjct: 72 LKLGYQPNTITLNTLMKGLCLK---GEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKI 128
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ A LL + + +PN V Y+ I G CKD EA Y M G+ PN Y
Sbjct: 129 GETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITY 188
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-K 383
T++Y C G A G E I K PN T L+ L KV EAK L+ ++ K
Sbjct: 189 STLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTK 248
Query: 384 EKFTKNVDTWNEIEAG 399
E NV ++N + G
Sbjct: 249 EGVKPNVVSYNTLMDG 264
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 3/264 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S ++YG A A EM + +V + L+ AL KE K +
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K G+KP++ +YN ++ +C + +A + M +K + PN S+ ++ K ++
Sbjct: 247 TKE-GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ +L+ + M Y+ I CKL + A LL EM +G + VTY+
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ CK+ N ++A + M G+ PN Y ++ +CKGG ++ A + + KG
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425
Query: 352 WVPNFTTMKSLVTGLAGASKVSEA 375
N T +++GL + EA
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEA 449
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ +V ++N L+ + + + K++F + G+ P++ +YN +I C+S
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK-GVNPNVYSYNIMIDRLCKSK 304
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++L E+ K++ PN ++ +L+ GF K + +L+ M G + V Y
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LCK + +A AL +M +G++PN TY+ I G CK G + A+K ++ +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G N Y M+ +CK G + AL + G +P+ T + ++ L + +A
Sbjct: 425 GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA 484
Query: 376 KELI 379
++L+
Sbjct: 485 EKLL 488
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 3/215 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D +Y ++ C+ ++ SA +L ++ +S +PN + ++ G K++ +
Sbjct: 110 GFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G+ V Y+ I+ C + EA LL+EM+ K + PN TY+ +
Sbjct: 170 YDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDA 229
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G +EAK +M+ G+ PN Y T++ C G+ + A + KG PN
Sbjct: 230 LCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
+ ++ L + +V EA + L++E KN+
Sbjct: 290 VYSYNIMIDRLCKSKRVDEA---MNLLREVLHKNM 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++I I++L ++ + L E+ + + N ++ I + + A+ KEM
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
V + +LL AL ++ + +F++ K GI+P+ TY +I C+
Sbjct: 352 YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERGIQPNKYTYTALIDGLCKGGR 410
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+A + + K + N ++ +++G KE ++ + ME G + +
Sbjct: 411 HKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEI 470
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGM 282
I SL + + +A+ LL EM++K +
Sbjct: 471 IIRSLFEKDQNDKAEKLLHEMIAKDL 496
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A+ F E ++ + +N+L+ L + +V E + G PD+ TYN
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYN 402
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI C+ + S A ++ + K P+ +F L+ G+ K K + ++++ M Y
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN ++ LCK K E EM+ KG PN +TY+ I FC+ EEA
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K MS GL P++ + T++Y C+ GD E A ++ KG+ T +L+
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582
Query: 366 LAGASKVSEAKEL 378
+G + A+++
Sbjct: 583 FSGKLNMHMAEKI 595
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 40/320 (12%)
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
SI Y +A AV F+ MD + A+NA++ AL A + + +V++
Sbjct: 59 SIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAA- 117
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PDL T+ +++FC ++ A +L + + A ++ +V G Y D
Sbjct: 118 GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDA 173
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK------------ 283
++ M + ++ +N +H+LCK EA LL +++ +GM
Sbjct: 174 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 233
Query: 284 ----------------------PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
P+ VTY+ I G CK +EA + R M N G P+
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
Y T++ CK + A K+++ KG+VP+ T SL+ GL V A EL
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353
Query: 382 VKEKFTK-NVDTWNEIEAGL 400
+ K K ++ +N + GL
Sbjct: 354 AQAKGIKPDIVVYNSLVKGL 373
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C D A + E K IKP+ + +LV G +
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V+ M G + YN+ I+ LCK+ ++A ++++ + KG P+ T++ I G
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M G++P++ Y +++ +CK G +E I KG PN
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 502
Query: 356 FTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAG 399
T L+ ++K+ EA K ++ + +E + ++N + G
Sbjct: 503 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N + L A E R ++ + Y + PD+ TYN +I+ C+ S A L M
Sbjct: 227 YNIWIRGLCEAGRLPEAVR-LVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P+ ++ ++ G+ K ++ ++L+ G Y I+ LC
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A L +E +KG+KP+ V Y+ + G C G A + M+ G P+ Y +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KF 386
+ +CK G+ A ++I KG++P+ T +L+ G K+ A +L+ + E
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464
Query: 387 TKNVDTWNEIEAGL 400
+ T+N + GL
Sbjct: 465 APDTITYNSVLNGL 478
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YGI PD TYN V+ C++ + EM K PN ++ L+ F + K E+
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+KV+ M + G+ +N I+ C+ A L ++ KG + T++ I
Sbjct: 522 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 581
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
F N A+K + M + G +S Y ++ CK + + A E I KG++P
Sbjct: 582 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 641
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ +T ++ L +V +A +I ++
Sbjct: 642 SMSTFGRVINSLTVNHRVFQAVGIIHIM 669
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ + M E+ + +N++L L A EV F E G P+ TYN
Sbjct: 450 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM-ILKGCHPNPITYNI 508
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ FC S+ A ++ +M ++ + P+A SF L+ GF + E + Q +E G
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N I + A+ + DEMLSKG + +S TY I G CK N + A
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 628
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
M G P+ S + ++ + A+G + G VP
Sbjct: 629 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 9/243 (3%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E R IE G P YN +I +C D +L EM+ K I P ++GA+
Sbjct: 98 EEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAI 157
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ ++ V +L M G+ V +YN I++LCK R ++A +L++M+
Sbjct: 158 IHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRF 217
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ VT++ I GFC++G+ EA K R GL PN Y +++ C G+ A
Sbjct: 218 NPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASD 277
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIE 397
E + +G P+ T+ +L+ GL + +V++A +V+EK + + + +N +
Sbjct: 278 LLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL----IVREKMAERQVMPDANIYNVLI 333
Query: 398 AGL 400
+GL
Sbjct: 334 SGL 336
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 125/265 (47%), Gaps = 1/265 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ + +V + A++ L D +V+ + E + G+ P++ YN VI A C+
Sbjct: 141 EMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEM-RARGLSPNVQIYNTVINALCKC 199
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+S A +L +M + P+ +F ++AGF +E + K+L+ R G++ Y
Sbjct: 200 RSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSY 259
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
IH C + A LL EM+ +G P+ +T I+G G +A M+
Sbjct: 260 TPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAE 319
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+ P++++Y ++ +CK A +E + + P+ +L+ G + K+S+
Sbjct: 320 RQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSD 379
Query: 375 AKELIGLVKEKFTKNVDTWNEIEAG 399
A+++ ++EK ++ +N + G
Sbjct: 380 ARKIFEFMEEKACPDIVAYNVMIKG 404
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 130/337 (38%), Gaps = 35/337 (10%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + I+ L + L E++ R N + + I + A +
Sbjct: 152 VTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQ 211
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + V FN ++ D +E ++ E + G++P+ +Y +I FC
Sbjct: 212 MVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRR-GLEPNQLSYTPLIHGFCVRG 270
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
++ A +L EM + P+ + GAL+ G + D V + M + ++YN
Sbjct: 271 EAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYN 330
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNS----------------------------- 286
V I LCK R + AK LL+EML + ++P+
Sbjct: 331 VLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEK 390
Query: 287 -----VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
V Y+ I G+CK G +EA M +G P+ Y T+V K GD +L
Sbjct: 391 ACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASL 450
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ + + PN T SL+ G A++L
Sbjct: 451 RLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDL 487
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD + YN +I C+ S+A ++L EM + ++P+ + L+ GF + +K D
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + ME V+ YNV I CK EA + M G P+ TY+ + G+
Sbjct: 382 KIFEFMEEKACPDIVA-YNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G+ + + M PN Y +++ C GD +A + ++G PN
Sbjct: 441 AKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV 500
Query: 357 TTMKSLVTGLAGASKVSEA 375
L+ L KV +A
Sbjct: 501 VHYTVLIGSLFKKDKVIQA 519
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G PD N +++ E A + EM + + S +V G E + E+
Sbjct: 40 HGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEE 99
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+++ G G YNV I C+ LL EM +KG+ P VTY I+
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+ G+ + + M GLSPN +Y T++ +CK A + + + P
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
+ T +++ G V EA +L+
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLL 244
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 27/271 (9%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHK 140
+KLS+A I +++EE K PD+ A+++++ Y + M + AV M +
Sbjct: 375 DKLSDARK---IFEFMEE-KACPDIV-----AYNVMIKGYCKFGMMKEAVTCMSSMRKAG 425
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+ L+ D R+ + K KP++ TY +I +C D+ SA
Sbjct: 426 CIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRR-CKPNIFTYASLICGYCNIGDTYSA 484
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ A+M + + PN + L+ +K++K + M + + ++
Sbjct: 485 EDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG 544
Query: 261 LCKLR------------KCAEAKALLD---EMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
L R + E ALLD ++S G+ P Y+ I+ C+ +A
Sbjct: 545 LVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKA 604
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
MSN G P+ + +++Y G+
Sbjct: 605 MDLKDKMSNKGCLPDPITFLSLLYGFSSAGE 635
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A+ L EML + + + + G C +G EE + G P + Y ++
Sbjct: 65 ARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLID 124
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTK 388
C+ GD L E KG +P T +++ L +++ + L+G ++ + +
Sbjct: 125 GYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSP 184
Query: 389 NVDTWNEI 396
NV +N +
Sbjct: 185 NVQIYNTV 192
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E I KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM-QV 199
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM K + PN +F L+ G K + +
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM+ KG+ P+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M N GL P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G++P+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S ++N+LL +L AK + +F + PD+ +Y+ +I FC+ + A +
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL 179
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+M + PN +++ A + G ++ + D V + M G V Y+ IH
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
RK +A L + M+S+G +PN+VTY+ ++G CK+ +EA + +R M G P+
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y T++Y C G E A+ E ++KG P+ L+ G A K EA++L ++
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359
Query: 384 EKFTK 388
+ K
Sbjct: 360 SRECK 364
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAF 148
F S + E PD+ ++SI++ G + E A + +K+M + +V +
Sbjct: 141 FAIFSTMVSERSVVPDVV-----SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 195
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
NA L L + + V+ E + G PD+ TY+ +I F + A+ + M
Sbjct: 196 NAFLNGLMRKGRIADAQGVYEEM-ISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMI 254
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ +PNA ++ L+ G KE K ++ +++ + M G Y ++ C + K
Sbjct: 255 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIE 314
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A + DEM+SKG P+ V Y+ + GF + G EA++ +++M + P++ + M+
Sbjct: 315 QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMI 374
Query: 329 YFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ K + A+ F + G P+ T SL+ GL G ++SEA
Sbjct: 375 DGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN + + A + EM P+ ++ L+ GF K++ +++
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G + YN +H LCK K EA L +M+ +G P+ VTY+ +YGFC
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G E+A + + M + G P+ Y ++ + G A + +++ P+ +
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD--TWNEIEAGL 400
++ GL+ A ++ +A E+ +++ + D T+N + GL
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S +++G A + A F+ M R + +N LL L E +F +
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G PD TY ++ FC A + EM K P+ ++ L+ GF++ K
Sbjct: 290 ER-GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVTYSH 291
+ ++ Q+M K +N+ I L K ++ +A + + M G P+ VTY+
Sbjct: 349 GEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 408
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
I+G C + EA K ++ + LSP+ + ++ M G
Sbjct: 409 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT---MVYFMCKGGDYETAL 341
N+V ++ F+ G CK G E+A + R M S S T ++ +CK G ++AL
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ I +G+ P+ T L+ L A K+ EA+E +
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 107
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV---RIHSLCKLRKCAEAK 271
N ++ A + G K K E + + M+ S I LCK + A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV--YFTMVY 329
+LL+ M+ +G P+ T+S I CK +EA++F + M+ + + SS Y +++
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 330 FMCKGGDYETALGFCKESIA-KGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFT 387
+CK A ++ + VP+ + L+ G ++ A++L ++
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 388 KNVDTWNEIEAGL 400
NV T+N GL
Sbjct: 190 PNVTTYNAFLNGL 202
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
A++ +L G +A A + F+ M + + + N ++ L+ AK + VF
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ +G PDL TYN +I C S A + E+DR + P+ +F L+ Y
Sbjct: 394 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+PD+ YN +I C+ + AY EM+ + I P+ ++ L+ GF +
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS 328
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M + V Y + I +LCK K EAK LL M +G+KPN VTYS + G+C
Sbjct: 329 LLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G AK+ + M + ++P+ Y M+ +CKG + A+ +E + K VPN
Sbjct: 389 LVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTV 448
Query: 358 TMKSLVTGLAGASKVSEAKELI 379
T SL+ GL + +++ A +L+
Sbjct: 449 TYNSLIDGLCKSGRITSALDLM 470
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 21/344 (6%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQY------------LEELKTRPDLQNERFHAHSIIL 119
H +A +N++S NG+ + +E+ TRPD+ ++ I+
Sbjct: 225 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVV-----MYNTII 279
Query: 120 YG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
G + + A + EM+ + V ++ L+ +A + E I
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEM-TLKNI 338
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
PD+ TY +I A C+ A ++L M ++ +KPN ++ L+ G+ + + +
Sbjct: 339 NPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQ 398
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M + + V YN+ I+ LCK + EA LL EML K + PN+VTY+ I G C
Sbjct: 399 IFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLC 458
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G A + + + G + Y +++ +CK + + A+ + +G PN
Sbjct: 459 KSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 518
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ GL +++ A++L ++ + +V T+N + GL
Sbjct: 519 TYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGL 562
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T + +I FC + ++S+L ++ + +PN L+ G + +V
Sbjct: 162 GIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLK---GEV 218
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
K L ++ G + Y ++ LCK+ + A LL + + +P+ V Y+
Sbjct: 219 KKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTI 278
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CKD EA FY M++ G+ P+ Y T++ C G A E K
Sbjct: 279 IDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNI 338
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAG 399
P+ T L+ L K+ EAK L+G++ KE NV T++ + G
Sbjct: 339 NPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ +V ++ L+ + + K++F +T + P + +YN +I C+
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE-VNPSVCSYNIMINGLCKGK 426
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++L EM K++ PN ++ +L+ G K + +++ + G + V Y
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LCK + +A AL +M +G++PN TY+ I G CK + A+K ++ +
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + Y M+ +CK G + AL + G +P+ T + ++ L + +A
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKA 606
Query: 376 KELI 379
++L+
Sbjct: 607 EKLL 610
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 3/247 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + F M + ++ SV ++N ++ L K E + E + P
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK-NVVP 445
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +I C+S +SA ++ E+ + + ++ +L+ G K + + +
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G++ Y I LCK + A+ L +L KG + TY+ I G CK+
Sbjct: 506 MKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP--NFT 357
G +EA M ++G P++ + ++ + + + + A E IAKG + NF
Sbjct: 566 GMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFH 625
Query: 358 TMKSLVT 364
+S VT
Sbjct: 626 GERSPVT 632
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + + +++ + + +A S+ +M+ K I+P+ + L+ F + V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L + + G + + + LC + ++ D+++++G + N V+Y + G CK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G A K R++ + P+ +Y T++ +CK A F E ++G P+ T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+L+ G A ++ A L+ E KN++
Sbjct: 310 YSTLICGFCLAGQLMGA---FSLLNEMTLKNIN 339
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A M + ++ +N ++ I D K+ V + G +L TYN
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNT 465
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C+S +++SA IL M KP+ S+ L+ GF K K E + M G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I CK K A +LL+ M G +PN TY+ I+G K NF A+
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ ++M G+ PN Y M+ +CK G AL + I +G +PN T SL+ L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
KV EA+ L GL+ ++ T
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEIT 672
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +EM H + + ++AL Y++ R+F++ K G +P++ TY +I
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALI 362
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A + M R + PN ++ AL+ + + + VL +M R G
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I C L +A +++ ML +G N VTY+ I G+C GN A +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M + G P+ Y ++ CK E+A G E + G PN T +L+ G
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
K+ A L+ +K + NV T+N + GL
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 6/277 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI--EFPKTYGIKPDLDTYNR 186
A+ F M + + +NAL+ I + + +K F+ G P++ TYN
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALI---NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C D A ++ M ++ N ++ ++ G+ ++L +M G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K Y I CK+ K A L +EM+ G+ PN VTY+ I G+CKD + A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M SG PN Y +++ + K ++ A CK I +G PN T +++ GL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
S A E+ ++++ N+ T++ + L Q
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ + G KPD +Y +I FC+ S SA+ + EM + PN ++ AL+ G+
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+EK + +L+ M+R G + V YNV IH L K + A+ L M+ +G+ PN V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I G CK+G+ A + + M G PN Y +++ + + G E A E
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G +P+ T ++ + KV A +G ++K + T+ + GL
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 127 EHAVRTFKEMD---EHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKP 179
E RT +D + LR + A++ALL+ L+ A R+ E G++P
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQP 213
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L YN VI A C+ + + A +I+ ++ + P+ ++ +++ G ++ + +V
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G + Y+ I+ LC + EA L+ EM+ G+ P + T + I C
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +E+A + + M N G PN Y ++ +C G + A+G G PN T
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
Query: 360 KSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAG 399
+L+ L ++ A ++ L+ + + N+ T+NE+ G
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 2/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K++ E ++ + +++L D +VF + K G +P+ TY+ +I C
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLC 296
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + A+ ++ EM I P A + + YED ++ M+ G + V
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LC A L M G+ PN+VTY+ I ++ + A +M
Sbjct: 357 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G SPN Y M+ C GD + A+ + +G N T +++ G +
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476
Query: 373 SEAKELIGLVKEKFTKNVDTWNEIE 397
+ A ++ L+++ K D W+ E
Sbjct: 477 TSALRILDLMRDGGCKP-DEWSYTE 500
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
E A F EM + L + + AL+ KD K + +E K G +P++ TYN
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGY--CKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I + ++ S A + M + I PN ++ A++ G
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG-------------------- 609
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
LCK + A + ++M+ +G PN +TYS I ++G EEA
Sbjct: 610 ---------------LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + GL P+ Y M+ G E A F I G P T L+ G
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Query: 366 L 366
L
Sbjct: 715 L 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A +L M + + P+ ++ +L+ + + V + M G + ++ Y I
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+LC+L + EA+ + ML + P+ V + I G +DG + +F IM P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
Query: 320 NSSVY 324
+ +Y
Sbjct: 903 SFHIY 907
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 152/374 (40%), Gaps = 57/374 (15%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFN-GISQYLEELKTRPDLQNER 111
N +KIL P D +S IN L N ++ + E + E+
Sbjct: 338 QNADKILRDAMFKGFIP----DEFTYSSLINGLCNDGDMNRAMAVFYEAM--------EK 385
Query: 112 FHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
HSIILY + + A++ K+M EH + +N ++ L +
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ + G PD+ T+N +I +C+ + A IL M I P+ ++ L+
Sbjct: 446 NGILND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G K K ++V + M G + YN+ I S CK RK +EA L EM ++G+ P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 285 NSVTYSHFIYGFCKDG------------------------------------NFEEAKKF 308
+ VT I G C +G N A+K
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKL 624
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M S +P++ Y M+ CK G+ + A F E+I+KG VP+FTT ++ L
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684
Query: 369 ASKVSEAKELIGLV 382
++SEA +I L+
Sbjct: 685 THRLSEAVVIINLM 698
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 156/333 (46%), Gaps = 18/333 (5%)
Query: 77 AFSIAINKLSEANYF---NGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+++ +N L E YF + + ++++ PD+ S + G+ A+R
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTA---ALRLL 169
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
M FNA+ I+ YKE ++ F E K GI PD+ T+N++I
Sbjct: 170 NNMPGQGCE-----FNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ-GICPDILTFNKLI 223
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + + + +++ ++ + PN +F + G ++ ++ ++L+ + G+
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I CK K EA+ L +M++ G++PN TY+ I GFCK G + A K
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R G P+ Y +++ +C GD A+ E++ KG+ + +LV GL+
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
V +A +L+ +++ + ++ T+N + GL
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY+ +I C D + A ++ E K K + + LV G K+
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++++ M +G + YN+ ++ LCK+ ++A +L++ ++KG P+ T++ I G
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK N ++A + M + G++P+ Y T++ +CK + + K + KG PN
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T L+ KVSEA EL +K + T ++ T + GL
Sbjct: 531 IITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN + L E R+ +E + G+ PD+ +YN +I FC+ S A L +
Sbjct: 253 TFNIFIQGLCRKGAIDEAARL-LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M ++PN ++ ++ GF K ++ +K+L+ G Y+ I+ LC
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A A+ E + KG K + + Y+ + G K G +A + + M G SP+ Y
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
+V +CK G A G ++IAKG +P+ T +L+ G + +A E++ ++
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 386 FTKNVDTWNEIEAGL 400
T +V T+N + GL
Sbjct: 492 ITPDVITYNTLLNGL 506
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 5/330 (1%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++LE + LTP D ++++ I + + YL ++ NE +
Sbjct: 272 RLLESIVSEGLTP----DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + +A M ++A + ++ +++L+ L D VF E + G
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-G 386
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
K + YN ++K + A ++ +M P+ ++ +V G K D N
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L G + +N I CK R +A +LD MLS G+ P+ +TY+ + G
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK + ++ M G +PN Y ++ CK A+ KE +G P+
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
T+ +L+ GL ++ +A EL +++++
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEY 596
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 129/290 (44%), Gaps = 4/290 (1%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMD-EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
H ++I Y N +A++ F ++ E +H++ + ++ L + ++ ++ V E
Sbjct: 9 HVAAVIRY--QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K K Y +++ + A ++ MD +P+ S+ A++ +
Sbjct: 67 RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ +KV M+ G+ V + +R+ S C + A LL+ M +G + N+V+Y
Sbjct: 127 FSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCA 186
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GF K+ EA + M G+ P+ + +++ +CK G+ + + + + +G
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
PN T + GL + EA L+ +V E T +V ++N + G
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGF 296
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 1/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M+ +R S+ ++ L+ L KE +F + + I PD TYN +I FC
Sbjct: 218 MRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFC 277
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A SI M + +PNA ++ L+ G K+ + E V + M R G++
Sbjct: 278 RLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAV 337
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + LC+ E L+ EM KG K + VTY+ + G CKD EA +
Sbjct: 338 SYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKL 397
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ N + Y ++ +C G+ E A G + +G+VP++ L+ GL +V
Sbjct: 398 PSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRV 457
Query: 373 SEAK-ELIGLVKEKFTKNVDTWNEI 396
S+A L GLV F W +
Sbjct: 458 SDATVTLYGLVDTGFMPEARCWARL 482
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+ + + VF E ++ G++PD +Y ++ C + +++ EM +K K + ++
Sbjct: 316 EVEAARGVFEEMIRS-GVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTY 374
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ G K+ + + +L+ + G++ V+ Y + ++ LC + +A LL ML
Sbjct: 375 NLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLG 434
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+G P+ + + G C G +A + ++G P + + ++
Sbjct: 435 RGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLI 483
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 35/242 (14%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K +G+ P L YN +I + C+ A S+ M K + PN ++ L+ F K K
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ L M G+K+ V Y+ I CKL K AK+L DEM++ G+KPN V Y+
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM--------------------- 331
I G+CK+G A + Y M+ G+SPN+ + ++ +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526
Query: 332 --------------CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
CK G+ A E + KG VP+ T + L++GL +VSEA+E
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586
Query: 378 LI 379
+
Sbjct: 587 FM 588
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +M E ++ +V +++L+ + K +F E G+KP++ Y +I
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLI 467
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + +A+ + EM K I PN +F AL++G + + NK+ M + +
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YNV I CK A LLDEM+ KG+ P++ TY I G C G EA++F
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ N + +++ CK G + AL C+E + +G + L+ G+
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGIL- 646
Query: 369 ASKVSEAKELIGLVKE 384
+ + + +I L+K+
Sbjct: 647 --RQQDRRSIIDLLKQ 660
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYS 202
SV +N + L K+ + + V I+ +Y G++ D+ TY ++ C+ + +
Sbjct: 249 SVATYNVFIRGL--CKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEE 306
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
++ EM P+ ++ LV G K+ ++ ++++G+ + +YN I+S+C
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYS----------------HF-------------- 292
K K EA++L + M KG+ PN VTYS HF
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426
Query: 293 -----IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
I G CK G AK + M +GL PN +Y +++ CK G+ A E
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
KG PN T +L++GL A++++EA +L G +V+ N T+N + G
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + +A R + EM + + F AL+ L A E ++F E + + + P
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE-WNVIP 528
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN +I+ C+ ++ A+ +L EM K + P+ ++ L++G + + + +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++ K ++ +H CK + +A EML +G+ + V YS IYG +
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ + M + GL P++ +Y TM+ K G+ + A G +++G +PN T
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTY 708
Query: 360 KSLVTGLAGASKVSEAKEL 378
+L+ GL + +A+ L
Sbjct: 709 TALINGLCKIGLMDKAELL 727
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 8/268 (2%)
Query: 114 AHSIILYGQANMTEH--AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S+++YG + + K+M + LR + ++ A A + K ++ +
Sbjct: 637 CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLW-DI 695
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G P++ TY +I C+ A + EM + PN +++ + E
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755
Query: 232 YEDVNKVLQMMERY--GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
E K +Q+ + G + YN+ I CKL + EA +L M+ G+ P+ ++Y
Sbjct: 756 IE---KAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISY 812
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
S IY +C+ G+ +EA K + M N G++P++ Y ++Y C G+ A + +
Sbjct: 813 STIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMR 872
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+G PN T SL+ G S VS +
Sbjct: 873 RGVKPNRATYNSLIHGTCLMSSVSSTAD 900
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 5/245 (2%)
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
++R G N L+ + ++ +F E + G++PD+ Y V+++ CE D
Sbjct: 179 QIRTLSGVLNGLIRI----RQFRMALHLFDEIVSS-GLRPDVYVYTAVVRSLCELKDFIR 233
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A ++ M+ + +++ + G K ++ + ++ ++ G+++ V Y +
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LCK+ + + +++EM+ G P+ S+ + G K GN A + G++P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ VY ++ MCK G + A KG PN T L+ K+ A +
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 380 GLVKE 384
G + E
Sbjct: 414 GKMTE 418
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 148/340 (43%), Gaps = 17/340 (5%)
Query: 66 ALTPESHLDRLAFS--IAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
L P+++ R S + ++SEA +++ +L+ NE + + Y +
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAR------EFMNDLQGEQQKLNEMCFSALLHGYCKE 613
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPD 180
+ A+ +EM + + ++ L+ + +D +R I+ K G++PD
Sbjct: 614 GRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD----RRSIIDLLKQMHDQGLRPD 669
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
Y +I A ++ + A+ + M + PN ++ AL+ G K + + +
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M + Y + L +A L D +L +G N+VTY+ I GFCK G
Sbjct: 730 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLG 788
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA + M +SG+SP+ Y T++Y C+ GD + A+ + + +G P+
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 848
Query: 361 SLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
L+ G ++++A EL +++ N T+N + G
Sbjct: 849 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
++ +I+ + ++ ++ M I P + ++ G + ++ + +
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G++ V +Y + SLC+L+ A+ ++ M S G + TY+ FI G CK+
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA + ++S GL + Y T+V +CK ++E E I G+VP+ + +LV
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 364 TGLAGASKVSEAKELIGLVKE 384
GL + A +L+ VK+
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKK 348
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 1/228 (0%)
Query: 152 LLALTIAKDYKEVK-RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL T ++ +E+ V + GI P + T + V+ A + E+
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS 209
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++P+ + A+V + + + +V+ ME G V+ YNV I LCK ++ EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ + + KG++ + TY + G CK FE ++ M G P+ + +V
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ K G+ +A + G P+ +L+ + K+ EA+ L
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+++ I + + R+ + ++ M+ G+ P T S + G + F A + +
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+SGL P+ VY +V +C+ D+ A + G + T + GL +V
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 374 EAKELIGLVKEK-FTKNVDTWNEIEAGL 400
EA E+ L+ K +V T+ + GL
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGL 295
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A M + ++ +N ++ I D K+ V + G +L TYN
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNT 465
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C+S +++SA IL M KP+ S+ L+ GF K K E + M G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I CK K A +LL+ M G +PN TY+ I+G K NF A+
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ ++M G+ PN Y M+ +CK G AL + I +G +PN T SL+ L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
KV EA+ L GL+ ++ T
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEIT 672
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +EM H + + ++AL Y++ R+F++ K G +P++ TY +I
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALI 362
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A + M R + PN ++ AL+ + + + VL +M R G
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I C L +A +++ ML +G N VTY+ I G+C GN A +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M + G P+ Y ++ CK E+A G E + G PN T +L+ G
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
K+ A L+ +K + NV T+N + GL
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 6/277 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI--EFPKTYGIKPDLDTYNR 186
A+ F M + + +NAL+ I + + +K F+ G P++ TYN
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALI---NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C D A ++ M ++ N ++ ++ G+ ++L +M G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K Y I CK+ K A L +EM+ G+ PN VTY+ I G+CKD + A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M SG PN Y +++ + K ++ A CK I +G PN T +++ GL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
S A E+ ++++ N+ T++ + L Q
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ + G KPD +Y +I FC+ S SA+ + EM + PN ++ AL+ G+
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+EK + +L+ M+R G + V YNV IH L K + A+ L M+ +G+ PN V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I G CK+G+ A + + M G PN Y +++ + + G E A E
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G +P+ T ++ + KV A +G ++K + T+ + GL
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 127 EHAVRTFKEMD---EHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKP 179
E RT +D + LR + A++ALL+ L+ A R+ E G++P
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQP 213
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L YN VI A C+ + + A +I+ ++ + P+ ++ +++ G ++ + +V
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G + Y+ I+ LC + EA L+ EM+ G+ P + T + I C
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +E+A + + M N G PN Y ++ +C G + A+G G PN T
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
Query: 360 KSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAG 399
+L+ L ++ A ++ L+ + + N+ T+NE+ G
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 2/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K++ E ++ + +++L D +VF + K G +P+ TY+ +I C
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLC 296
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + A+ ++ EM I P A + + YED ++ M+ G + V
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LC A L M G+ PN+VTY+ I ++ + A +M
Sbjct: 357 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G SPN Y M+ C GD + A+ + +G N T +++ G +
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476
Query: 373 SEAKELIGLVKEKFTKNVDTWNEIE 397
+ A ++ L+++ K D W+ E
Sbjct: 477 TSALRILDLMRDGGCKP-DEWSYTE 500
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
E A F EM + L + + AL+ KD K + +E K G +P++ TYN
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGY--CKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I + ++ S A + M + I PN ++ A++ G
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG-------------------- 609
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
LCK + A + ++M+ +G PN +TYS I ++G EEA
Sbjct: 610 ---------------LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + GL P+ Y M+ G E A F I G P T L+ G
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Query: 366 L 366
L
Sbjct: 715 L 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A +L M + + P+ ++ +L+ + + V + M G + ++ Y I
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+LC+L + EA+ + ML + P+ V + I G +DG + +F IM P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
Query: 320 NSSVY 324
+ +Y
Sbjct: 903 SFHIY 907
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 158/365 (43%), Gaps = 37/365 (10%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
LT LK +PE+ L + H D ++S I KL+++ F+ + Q L ++ R
Sbjct: 53 LTDLKEIEDPEEALSLFHQYQEMGFRH-DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 106 DLQNERFHAHSIILYGQANMTEHA------------VRTFKEMD---------------- 137
E I YG+A + A VRT + ++
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 138 -------EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +LR + +FN L+ D++ +VF E + ++P + TYN +I
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME-VQPSVVTYNSLIGF 230
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + D A S+L +M +K I+PNA +FG L+ G + +Y + K++ ME G K G
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ Y + + L K + EAK LL EM + +KP+ V Y+ + C + EA +
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G PN++ Y M+ C+ D+++ L +A P T +V GL
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Query: 371 KVSEA 375
+ A
Sbjct: 411 NLDHA 415
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M + ++R + F L+ L +Y E K++ + + G KP L Y ++
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM-EYRGCKPGLVNYGILMSDLG 302
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L EM ++ IKP+ + LV E + + +VL M+ G K +
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + I C++ +L+ ML+ P T+ + G K GN + A +M
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 313 SNSGLSPNSSVYFTMVYFMC--KGGDYETAL 341
LS S + ++ +C GG Y AL
Sbjct: 423 GKKNLSFGSGAWQNLLSDLCIKDGGVYCEAL 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+D +E +F ++ + G + D +Y+ +I +S + + IL + ++++ S
Sbjct: 60 EDPEEALSLFHQY-QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ + K + V + + + N I+ L + +AK+ D
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
++PNSV+++ I GF ++E A K + M + P+ Y +++ F+C+ D
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
A ++ I K PN T L+ GL + +EAK+L+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLM 279
>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
Length = 633
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 9/221 (4%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY--KEEKYEDV 235
+PD + V A +S +A ++L M + P+A++ LV G Y + +++
Sbjct: 179 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLV-GVYACRLRRFDAA 237
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V++ M G+ V Y+ I LC + AEA +LD ML +G +PN+ TY+ ++
Sbjct: 238 YEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHA 297
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C G EAK+ M SG +P+++ Y +V +CK G +E +ES AKGW P+
Sbjct: 298 YCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPD 357
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T S + GL A ++ ++ L+ GL + T N+
Sbjct: 358 VITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNI 398
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY+ +I C + + A +L M + +PNA ++ +V + + +
Sbjct: 248 GVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEA 307
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L M G + YNV + +LCK+ E ALL+E +KG P+ +TYS ++ G
Sbjct: 308 KRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDG 367
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G +++ M ++GL P+ ++ +C+ A + S GW N
Sbjct: 368 LCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDAN 427
Query: 356 FTTMKSLVTGLAGASK-VSEAKELIGLVKEKFTKNVDTWNEI 396
+++ L + +S K + K+ N T+N +
Sbjct: 428 VVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIV 469
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 2/223 (0%)
Query: 176 GIKPDLDTYNRVIKAF-CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G+ PD ++ + C +AY ++ M + P+ ++ L++G + +
Sbjct: 212 GVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAE 271
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
VL +M G + Y +H+ C + EAK LL+ M++ G P++ TY+ +
Sbjct: 272 ALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVE 331
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
CK G FEE + G +P+ Y + + +CK G + + + ++ G P
Sbjct: 332 ALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQP 391
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEI 396
+ T+ L+ G+ +S AK L+ E + NV +N +
Sbjct: 392 SEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTV 434
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ TY ++ A+C A +L M P+ +++ LV K +E+V
Sbjct: 283 GCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEV 342
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L+ G V Y+ + LCK + ++ AL+D+MLS G++P+ VT + + G
Sbjct: 343 DALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDG 402
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ AK+ + G N Y T++ +C + + + + KG PN
Sbjct: 403 VCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPN 462
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
T +V L ++ +A L L ++F V T+N +
Sbjct: 463 SWTFNIVVHSLCKLGRLHKA--LCLLRSKEFVATVITYNTL 501
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 133/359 (37%), Gaps = 42/359 (11%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ L A G+ + E +P+ H+ Y A
Sbjct: 252 DVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHA---YCTGGRIHEAK 308
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R M S +N L+ AL ++EV +E G PD+ TY+ +
Sbjct: 309 RLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVD-ALLEESTAKGWTPDVITYSSYMDG 367
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C++ +++++ +M ++P+ + L+ G + ++L+ G +
Sbjct: 368 LCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDAN 427
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN + LC R+ L +M KG+ PNS T++ ++ CK G +A R
Sbjct: 428 VVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALCLLR 487
Query: 311 I--------------------------------MSNSGLSPNSSVYFTMVYFMCKGGDYE 338
M G++PN Y ++ +C+ +
Sbjct: 488 SKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFL 547
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEI 396
AL +S+ + P + S++ GL + + LIG V + F V + E+
Sbjct: 548 VALCCFYQSLEDDFFP--SAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQEL 604
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 1/257 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E F+E+ L V +++ L+ L A +E ++F E K G+ D+
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM-KEQGLHLDV 622
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN VI FC+S AY +L EM K ++P ++G++V G K ++ ++ + +
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ G+ V +Y+ I K+ + EA +L+E++ KG+ PNS T++ + K
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA+ ++ M N SPN+ Y M+ +C + A F +E +G PN T +
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802
Query: 362 LVTGLAGASKVSEAKEL 378
++ GLA A V EA+ L
Sbjct: 803 MIAGLAKAGNVMEARGL 819
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 8/333 (2%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
+ E +A L P D ++SI I+ L +A + + E+K + L + +++
Sbjct: 574 LFEEIKAQGLVP----DVRSYSILIHGLVKAGFSRETYKLFYEMKEQ-GLHLDVLAYNTV 628
Query: 118 I-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + ++ + A + +EM L+ +V + +++ L E +F E K+ G
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLF-EEAKSIG 687
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ ++ Y+ +I F + AY IL E+ +K + PN+ ++ L+ K E+ ++
Sbjct: 688 VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ 747
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
Q M+ Y++ I+ LC +RK +A EM +G+KPN++TY+ I G
Sbjct: 748 VCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGL 807
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K GN EA+ + SG P+S+ Y M+ + A +E+ KG N
Sbjct: 808 AKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNS 867
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
T L+ L A + +A ++G V + K+
Sbjct: 868 KTCVVLLDALHKADCLEQAA-IVGAVLREMAKS 899
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 145/328 (44%), Gaps = 3/328 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +++ I+ + + ++ E+K + + ++ + I + +A + AV F
Sbjct: 272 DLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELF 331
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+E+D ++ V A+N +++ A + E + +E K G P + YN ++
Sbjct: 332 EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSL-LERQKRKGCIPSVIAYNCILTCLGR 390
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A I EM R+ PN +++ L+ K + E KV M+ G+ +
Sbjct: 391 KGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMT 449
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
N+ I LCK +K EA ++ + K P+S T+ I G + G ++A Y M
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+S PN VY +++ K G E KE + +G P+ + S + + A +V
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569
Query: 374 EAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ + L +K + +V +++ + GL
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGL 597
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + +A E A++ M E L ++ N ++ L A+ E +F+
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV- 477
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD T+ +I AYS+ +M PN + +L+ F+K + ED +
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M G + + N + + K + + +AL +E+ ++G+ P+ +YS I+G
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G E K + M GL + Y T++ CK G + A +E KG P
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657
Query: 357 TTMKSLVTGLAGASKVSEA 375
T S+V GLA ++ EA
Sbjct: 658 VTYGSVVDGLAKIDRLDEA 676
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL N + ++ + ++ E+ + + P+ S+ L+ G K +
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRET 606
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M+ G+ V YN I CK K +A LL+EM +KG++P VTY + G
Sbjct: 607 YKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K +EA + + G+ N +Y +++ K G + A +E + KG PN
Sbjct: 667 LAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 726
Query: 356 FTTMKSLVTGLAGASKVSEAK 376
T L+ L A ++ EA+
Sbjct: 727 SYTWNCLLDALVKAEEIDEAQ 747
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 8/289 (2%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFN-----ALLLALTIAKDYKEVKRV 167
AH +Y M R +++ SV F ++ L + K +K +K
Sbjct: 129 QAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHK-LKEA 187
Query: 168 F--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F IE + + +P Y +I A ++ ++ +M + N F LV
Sbjct: 188 FGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRV 247
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
F +E + + +L M+ + + +YNV I K+ K A EM ++G+ P+
Sbjct: 248 FAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPD 307
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VTY+ I CK +EA + + + + P Y TM+ G ++ A +
Sbjct: 308 DVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLE 367
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
KG +P+ ++T L KV EA + +++ N+ T+N
Sbjct: 368 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYN 416
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 12/329 (3%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE- 127
L + F+ IN L + F + +++ R PD+ H ++ I+ G + E
Sbjct: 189 QLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDV-----HTYTTIINGLCKIGET 243
Query: 128 -HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
A F++M E + V ++ ++ +L + E +F + K GI P++ TYN
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF-SYMKAKGISPNIFTYNS 302
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C S A ++L EM +I PN +F L+ F KE + VL+ M G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V Y+ ++ + EA+ L D M++KG KP+ +Y+ I G+CK EAK
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M + GL+P+ Y T++ +C+ G A K + G +P+ T L+ G
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWN 394
+++A L ++ + K N+ +N
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYN 511
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
K M E + +V +++L+ ++ + E +++F + T G KPD+ +YN +I +
Sbjct: 354 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF-DVMITKGCKPDVFSYNILINGY 412
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A + EM + + P+ S+ L+ G + + + + + + M G +
Sbjct: 413 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y++ + CK A+A L M S +KPN V Y+ I CK N +EA+K +
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ GL PN +Y T++ +CK G + AL + G PN + ++ G
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKD 592
Query: 372 VSEAKELIGLVKEK-FTKNVDT 392
S A +LIG ++EK F +V T
Sbjct: 593 ESRAVQLIGEMREKGFVADVAT 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 1/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M K R + FN LL A+ + Y + + + G+ PD T +
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F + +S+LA++ + ++ +F L+ G K K+ ++ M G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V Y I+ LCK+ + A L +M G +P+ VTYS I CKD EA
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+SPN Y +++ +C + A E ++ +PN T L+
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
V EA+ ++ + E + NV T++ + G
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ + T+N +I C+ A + +M + +P+ ++ ++ G K +
Sbjct: 187 GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAA 246
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G + V Y+ I SLCK R+ EA + M +KG+ PN TY+ I G
Sbjct: 247 AGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQG 306
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C + EA M + + PN + ++ CK G+ A G K G PN
Sbjct: 307 LCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN 366
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
T SL+ G + ++V EA++L ++ K K +V ++N + G
Sbjct: 367 VVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILING 411
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A M + ++ +N ++ I D K+ V + G +L TYN
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNT 465
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C+S +++SA IL M KP+ S+ L+ GF K K E + M G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I CK K A +LL+ M G +PN TY+ I+G K NF A+
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ ++M G+ PN Y M+ +CK G AL + I +G +PN T SL+ L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
KV EA+ L GL+ ++ T
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEIT 672
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +EM H + + ++AL Y++ R+F++ K G +P++ TY +I
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALI 362
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A + M R + PN ++ AL+ + + + VL +M R G
Sbjct: 363 SGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I C L +A +++ ML +G N VTY+ I G+C GN A +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M + G P+ Y ++ CK E+A G E + G PN T +L+ G
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
K+ A L+ +K + NV T+N + GL
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 6/277 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI--EFPKTYGIKPDLDTYNR 186
A+ F M + + +NAL+ I + + +K F+ G P++ TYN
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALI---NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C D A ++ M ++ N ++ ++ G+ ++L +M G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K Y I CK+ K A L +EM+ G+ PN VTY+ I G+CKD + A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M SG PN Y +++ + K ++ A CK I +G PN T +++ GL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
S A E+ ++++ N+ T++ + L Q
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ + G KPD +Y +I FC+ S SA+ + EM + PN ++ AL+ G+
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+EK + +L+ M+R G + V YNV IH L K + A+ L M+ +G+ PN V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I G CK+G+ A + + M G PN Y +++ + + G E A E
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G +P+ T ++ + KV A +G ++K + T+ + GL
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 127 EHAVRTFKEMD---EHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKP 179
E RT +D + LR + A++ALL+ L+ A R+ E G++P
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQP 213
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L YN VI A C+ + + A +I+ ++ + P+ ++ +++ G ++ + +V
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G + Y+ I+ LC + EA L+ EM+ G+ P + T + I C
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +E+A + + M N G PN Y ++ +C G + A+G G PN T
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393
Query: 360 KSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAG 399
+L+ L ++ A ++ L+ + + N+ T+NE+ G
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 2/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K++ E ++ + +++L D +VF + K G +P+ TY+ +I C
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLC 296
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + A+ ++ EM I P A + + YED ++ M+ G + V
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LC A L M G+ PN+VTY+ I ++ + A +M
Sbjct: 357 TYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G SPN Y M+ C GD + A+ + +G N T +++ G +
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476
Query: 373 SEAKELIGLVKEKFTKNVDTWNEIE 397
+ A ++ L+++ K D W+ E
Sbjct: 477 TSALRILDLMRDGGCKP-DEWSYTE 500
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
E A F EM + L + + AL+ KD K + +E K G +P++ TYN
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGY--CKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I + ++ S A + M + I PN ++ A++ G
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG-------------------- 609
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
LCK + A + ++M+ +G PN +TYS I ++G EEA
Sbjct: 610 ---------------LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + GL P+ Y M+ G E A F I G P T L+ G
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Query: 366 L 366
L
Sbjct: 715 L 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A +L M + + P+ ++ +L+ + + V + M G + ++ Y I
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+LC+L + EA+ + ML + P+ V + I G +DG + +F IM P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
Query: 320 NSSVY 324
+ +Y
Sbjct: 903 SFHIY 907
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P + YN +I +C D +L EM+ K P ++G+L+
Sbjct: 436 LIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLG 495
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+ E + + M + G+ V +YN I +LCK +A +L +M + G P+ +
Sbjct: 496 KKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDII 555
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I G C +G+ +A+ F R L+PN Y +++ C G+ A E
Sbjct: 556 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 615
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIEAGL 400
+ +G P+ T +L+ GL A KVSEA +V+EK T+ +V+ +N + +GL
Sbjct: 616 MGRGHTPDVVTFGALIHGLVVAGKVSEAL----IVREKMTERQVFPDVNIYNVLISGL 669
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ YG P++ NR++K E A + EM + + S LV G E +
Sbjct: 371 EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRV 430
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ K+++ G V YNV I C+ LL EM +KG P VTY
Sbjct: 431 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSL 490
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K G+ E+ + M GLSPN +Y +++ +CK A+ K+ A G
Sbjct: 491 INCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGC 550
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T +L+TGL V +A+ +
Sbjct: 551 DPDIITFNTLITGLCHEGHVRKAEHFL 577
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 2/269 (0%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
IN L + I E++ R N + + I + A+ K+M
Sbjct: 491 INCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGC 550
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ FN L+ L ++ + F+ + P+ +Y +I FC + +A
Sbjct: 551 DPDIITFNTLITGLCHEGHVRKAEH-FLREAIRRELNPNQLSYTPLIHGFCMRGELMAAS 609
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM + P+ +FGAL+ G K + V + M + V++YNV I L
Sbjct: 610 DLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 669
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK AK +L+EML K ++P+ Y+ I GF + N +A+K + M + G+ P+
Sbjct: 670 CKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDI 729
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAK 350
M+ C+ G A+ C ++ K
Sbjct: 730 VSCNAMIKGYCQFGMMSEAI-LCMSNMRK 757
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM+ ++ + +L+ L D +++ +F+E K G+ P++ YN VI A C
Sbjct: 472 LGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKR-GLSPNVQIYNSVIDALC 530
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ ++ A IL +M P+ +F L+ G E L+ R +
Sbjct: 531 KCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 590
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y IH C + A LL EM+ +G P+ VT+ I+G G EA M
Sbjct: 591 SYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 650
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ + P+ ++Y ++ +CK A +E + K P+ +L+ G + +
Sbjct: 651 TERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 710
Query: 373 SEAKELIGLVKEKFTK 388
+A+++ ++ K +
Sbjct: 711 GDARKIFEFMEHKGVR 726
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM-ERYGMKSGVSMYNVRIHSLC 262
L M P + GALVA + + + + E+YG V+ N + L
Sbjct: 331 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 390
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ R+ +A+ L DEML + ++ + + G C +G EE K +G P+
Sbjct: 391 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVV 450
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGL 381
Y ++ C+ GD L E AKG++P T SL+ L + + L + +
Sbjct: 451 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 510
Query: 382 VKEKFTKNVDTWNEI 396
K + NV +N +
Sbjct: 511 RKRGLSPNVQIYNSV 525
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 14/325 (4%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
+ +TP + +A++ I+ L AN F+ + ++ R + + I +
Sbjct: 352 SGVTPST----VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A K+M E V +N ++ L + +E +F E + G P+ ++
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER-LGCTPNRRSH 466
Query: 185 NRVIKAFCESS--DSSS-------AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
N +I C+ S D + A+ +L M P+ ++ L++G + +D
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M + K V N IH LCK + EA+ +LD M+S G P+ VTY+ ++G
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G E A++ M GL+PN Y +V +CK A G + + G PN
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 646
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG 380
T +L+ G A +V +L G
Sbjct: 647 LFTYTALILGFCSAGQVDGGLKLFG 671
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 27/306 (8%)
Query: 110 ERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT------ 156
E H ++ Y +++ E A+ F EM+ + + N ++L L
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480
Query: 157 -------IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
+ + ++ +KR+ + G PD+ TY+ +I C + A +L +M +
Sbjct: 481 QACQRGKLDEAFRLLKRMTDD-----GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+ KP + L+ G K + ++ +VL M G V YN +H C+ +
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A+ LL +M+++G+ PN VTY+ + G CK EA + M +SG +PN Y ++
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
C G + L E + G P+ +L L + + + A E++ +E
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS- 714
Query: 390 VDTWNE 395
+ W +
Sbjct: 715 -EAWGD 719
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 21/341 (6%)
Query: 80 IAINKLSEANYFNG-ISQYLEELKTRPDLQNERFH-AHSIILYG--QANMTEHAVRTFKE 135
+ +N L E G + + E L+ PD + ++ +L G +A E AVR F +
Sbjct: 213 VTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272
Query: 136 MD------EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ S+ +N ++L L E ++F E + PD +Y +I
Sbjct: 273 RELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMF-EKMNERNVSPDSWSYGILID 331
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
++ + A ++ ++ + P+ ++ +L+ G ++D ++ M R G
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 391
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YNV I + CK EA L+ +M+ G P+ VTY+ + G CK EEA +
Sbjct: 392 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 451
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKG---------GDYETALGFCKESIAKGWVPNFTTMK 360
M G +PN + T++ +C+ G + A K G VP+ T
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYS 511
Query: 361 SLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+L++GL ++V +A+ L+ +VK + V T N + GL
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 552
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 79/403 (19%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--------- 121
D F+ + L +A + ++E+++R P F AH + L G
Sbjct: 78 DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLL 137
Query: 122 -------------------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+A + A+ + M E ++ + G+ +++L+ L +
Sbjct: 138 EIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID 197
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E +V+ E + +P L T N +++ FC A +L M + P+ S+ +
Sbjct: 198 EALQVYRENRR----EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTV 253
Query: 223 VAGFYKEEKYED--------------------------------------VNKVLQMMER 244
+ G K + E+ +++ +QM E+
Sbjct: 254 LDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEK 313
Query: 245 YGMKSGVS----MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++ VS Y + I L K K +A+ L ++L G+ P++V Y+ I+G C
Sbjct: 314 MNERN-VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+F++A++ + M+ G P+ Y M+ CK G E A K+ I G VP+ T
Sbjct: 373 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432
Query: 361 SLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+++ GL +S+V EA L + + T N + N I GL Q
Sbjct: 433 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 475
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 125/330 (37%), Gaps = 54/330 (16%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG-----------QANMTEHAVRTFKEMDEHKLRHSVG 146
+E L P N R +H+ I+ G Q + A R K M + V
Sbjct: 454 MERLGCTP---NRR--SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++ L+ L + + + + K KP + T N +I C++ A +L
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKRQ-CKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M P+ ++ LV G + + E ++L M G+ V Y + LCK +
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA + +M S G PN TY+ I GFC G + K + M +G+SP+ VY T
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687
Query: 327 MVYFMCK-------------------------------------GGDYETALGFCKESIA 349
+ +CK G E ALGF ++ +
Sbjct: 688 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 747
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G +P SLV GL + + EA+ ++
Sbjct: 748 GGQLPAPERCASLVAGLCKSGQGGEARAVL 777
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 42/259 (16%)
Query: 118 ILYGQANM--TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
++ G N+ T AV+ F M+E H V +N L+ +L+ ++ + VK++ ++
Sbjct: 16 VIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKKM-VQVMVD 72
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G PD T+ ++ C++ A ++ EM + I P ++ L E
Sbjct: 73 RGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMER 132
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL---------------LDEMLS 279
++L++M + S YN+ + +LCK + +A L LD +L
Sbjct: 133 AFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV 188
Query: 280 KGM-----------------KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
M +P VT + + GFC G ++A++ R M + +P+
Sbjct: 189 GLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEV 248
Query: 323 VYFTMVYFMCKGGDYETAL 341
Y T++ +CK G E A+
Sbjct: 249 SYCTVLDGLCKAGRVEEAV 267
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M ++ I P F +++ G+ + + K+ +ME +YNV I SL K ++
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEEC-HSPYPDVYNVLIDSLSKRQE 59
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
K ++ M+ +G P+S T++ + G CK G +EA+ M + + P +
Sbjct: 60 TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + +C G E A + + V N + +V L A++V +A EL + EK
Sbjct: 120 LAHELCLRGSMERAF----QLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEK 174
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 73/213 (34%), Gaps = 45/213 (21%)
Query: 105 PDLQ--NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PD+ N H H +A TE A +M L +V + AL+ L A
Sbjct: 575 PDVVTYNTLVHGHC-----RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 629
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E VF + K+ G P+L TY +I FC + + EM I P+ +G L
Sbjct: 630 EACGVFAQM-KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688
Query: 223 VA-------------------------------------GFYKEEKYEDVNKVLQMMERY 245
A G + K E ++ M R
Sbjct: 689 AAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRG 748
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
G + LCK + EA+A+L+E++
Sbjct: 749 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 781
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ F+ LL ++T K Y V ++ + ++GI + T N +I +FC + A+S+
Sbjct: 9 SIVDFSKLLTSITRMKHYSTVLSLYKQM-DSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L ++ + +P+ ++F L+ G E K + ++ M G + V Y I+ LCK
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
R+ EA +L +ML+KG+ PN+ TYS I+G C G+++EA + + M + + P+
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 324 YFTMVYFMCKGGDYET---ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ T+V +CK G + A+G +E +G +P+ T +L+ GL ++ +A L
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 4/269 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ F +M + V + L+ L + E +F + GI P+ TY+ +I
Sbjct: 99 ALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK-GISPNNFTYSSLI 157
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM---MERY 245
C A + M + I P+ +F LV KE + ++K + + M +
Sbjct: 158 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQ 217
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN IH LC + + +A AL EM+ G P+ VTY CK+ EA
Sbjct: 218 GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEA 277
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+++ + L P+ +Y ++ MC+ G+ E A + +KG P+ T ++ G
Sbjct: 278 MVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMING 337
Query: 366 LAGASKVSEAKELIGLVKEKFTKNVDTWN 394
L ++EA +L G + E ++ T++
Sbjct: 338 LCQQGLLAEASKLFGEMDENDIESYSTFS 366
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E I KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQV 199
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM K + PN +F L+ G K + +
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM+ KG+ P+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M N GL P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G++P+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F EM E K+ +V + L+ L E + +F + G+ P+L TYN ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMM 270
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + A + EM + PN +FG L+ G K ++ K L M +G+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 249 SGVSMYN-----------------------------------VRIHSLCKLRKCAEAKAL 273
+ +YN + I LC + + EA L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM KG PN+VTY+ I G+CK+GN E+A + M+ G+ PN + T++ CK
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
G E A+G E + KG +P+ +L+ G
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ ++EM L +V F L+ L + ++ I+ ++G+ P
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM-ASFGVVP 331
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN +I +C++ + S A S+ +E+++ I P+ ++ L+ G ++ E+ + +L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M++ G YN I CK +A + +M KG++PN +T+S I G+CK
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G E A Y M GL P+ Y ++ K G+ + A KE G PN T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
L+ GL ++S+A +L L K NE++ L Q
Sbjct: 512 SCLIDGLCKDGRISDAIKLF-LAKTGTDTTGSKTNELDRSLYQ 553
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
II + + + E A+ + +MD + ++ A N +L L + + +V+ + G
Sbjct: 133 IIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDM-VARG 188
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
P++ TY +I C D A+ + EM K I P + L+ G E + +
Sbjct: 189 ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAE 248
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M GM + YN + CK+ +A L EML G+ PN VT+ I G
Sbjct: 249 SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGL 308
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK A+KF M++ G+ PN VY ++ CK G+ AL E +P+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T L+ GL G ++ EA L+ +K+K F N T+N + G
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 36/200 (18%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +SI I L + L+E+K + L N + I Y + E A+
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M E GI+P++ T++ +I +C+
Sbjct: 427 SQMTEK------------------------------------GIEPNIITFSTLIDGYCK 450
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A + EM K + P+ ++ AL+ G +K+ ++ ++ + M+ G+ V
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 254 YNVRIHSLCKLRKCAEAKAL 273
+ I LCK + ++A L
Sbjct: 511 LSCLIDGLCKDGRISDAIKL 530
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++NA++LAL +EV V + G++P++ TY ++ AFC++ + A +ILA
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGR-GLQPNVITYTTIVNAFCKAGELRMACAILAR 294
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M PN ++F ALV G + + + D + + M G YNV I LC +
Sbjct: 295 MVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGD 354
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A ++L++M G PN+ TYS I GF K G+ + A + M+ SG PN VY
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
MV CK + A + + + PN T +L+ L +V A + + +
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474
Query: 386 FTKNVDTWNEIEAGL 400
N T+NE+ GL
Sbjct: 475 CPPNGRTYNELLHGL 489
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 142/311 (45%), Gaps = 19/311 (6%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
A A+ +L+ A +G+ L+E++ R E ++ + +A + A++TF
Sbjct: 63 AHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTF--- 119
Query: 137 DEHKLRHSVGA--------FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
++ H +G +N L+ AL V V K G++P++ TYN ++
Sbjct: 120 --YRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKD-GVQPNVFTYNLLV 176
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+A C++ +A +L EM K P+ ++G +V+ + ++ +VL
Sbjct: 177 RALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVA-- 234
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I +LC+ + E A++ +M+ +G++PN +TY+ + FCK G A
Sbjct: 235 ---ASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAI 291
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M +G +PN + + +V + G AL K +A+GW P+ + L+ GL
Sbjct: 292 LARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCS 351
Query: 369 ASKVSEAKELI 379
+ A ++
Sbjct: 352 VGDLKGASSVL 362
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 129/291 (44%), Gaps = 1/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ I L G S L +++ N R ++ I + +A + A+ + +
Sbjct: 340 VSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWND 399
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + ++ + + + I+ P+ T+N +I++ C
Sbjct: 400 MTRSGCKPNVVVYTNMVGVFCKKLMFNQAES-LIDKMLVENCPPNTVTFNTLIRSLCNCR 458
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM R PN ++ L+ G ++E D +++ M+ +G++ + YN
Sbjct: 459 RVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYN 518
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LC++R EA + M+ +G++P++ T++ I+ +CK+G A M+
Sbjct: 519 TVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVV 578
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
N VY ++ +C E A+ + + + +G PN T LV G+
Sbjct: 579 NCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +K M S ++N L+ L D K V + + +G P+ TY+ +I
Sbjct: 323 ALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ-HGCFPNARTYSTLI 381
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ D A SI +M R KPN + +V F K+ + ++ M
Sbjct: 382 DGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCP 441
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I SLC R+ A + EM G PN TY+ ++G ++GN +A +
Sbjct: 442 PNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQM 501
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M N G+ + Y T+V +C+ A+ F I +G P+ T +++
Sbjct: 502 VIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCK 561
Query: 369 ASKVSEAKELIG 380
+V A ++G
Sbjct: 562 EGEVRMAAWILG 573
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 32/225 (14%)
Query: 208 DRKSIKPNASS-FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
D +P A + L+ +E V V M + G++ V YN+ + +LC+ +
Sbjct: 125 DLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHR 184
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF------------------ 308
A+ +LDEM +KG P+ VTY + C G +EA +
Sbjct: 185 VGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILAL 244
Query: 309 ---YRI---------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+R+ M GL PN Y T+V CK G+ A + G PN
Sbjct: 245 CREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNV 304
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +LV GL +V +A ++ +V E + + ++N + GL
Sbjct: 305 ATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGL 349
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F EM E K+ +V + L+ L E + +F + G+ P+L TYN ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMM 270
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + A + EM + PN +FG L+ G K ++ K L M +G+
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 249 SGVSMYN-----------------------------------VRIHSLCKLRKCAEAKAL 273
+ +YN + I LC + + EA L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM KG PN+VTY+ I G+CK+GN E+A + M+ G+ PN + T++ CK
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
G E A+G E + KG +P+ +L+ G
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
II + + + E A+ + +MD + ++ A N +L L + + +V+ + G
Sbjct: 133 IIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDM-VARG 188
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
P++ TY +I C D A+ + EM K I P + L+ G E + +
Sbjct: 189 ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAE 248
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M GM + YN + CK+ +A L EML G+ PN VT+ I G
Sbjct: 249 SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGL 308
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK A+KF M++ G+ PN VY ++ CK G+ AL E +P+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T L+ GL G ++ EA L+ +K+K F N T+N + G
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ + EM L +V F L+ L + ++ I+ ++G+ P
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM-ASFGVVP 331
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN +I +C++ + S A S+ +E+++ I P+ ++ L+ G ++ E+ + +L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M++ G YN I CK +A + +M KG++PN +T+S I G+CK
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G E A Y M GL P+ Y ++ K G+ + A KE G PN T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ GL ++S+A +L
Sbjct: 512 SCLIDGLCKDGRISDAIKL 530
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 48/221 (21%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P++ T++ +I +C++ +A + EM K + P+ ++ AL+ G +K+ ++
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL-------------DEMLSKGM 282
++ + M+ G+ V + I LCK + ++A L +E+
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP----------------------- 319
PN V Y+ I G C DG +A KF+ M SGL P
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612
Query: 320 ------------NSSVYFTMVYFMCKGGDYETALGFCKESI 348
NSSVY + + G ++AL FC E +
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGV 653
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKDYKEVKRVFIEFPK 173
I +Y + +M E + F +M + +L V N +L L + EV R EF
Sbjct: 171 IWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF-- 228
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
GIKP + TYN ++ ++C+ +L+EM R+ PN ++ L+ G K+ ++E
Sbjct: 229 --GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
++ M + G+K YN I+ AEA +L +EM+ KG P TY+ FI
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFI 346
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
YG CK G +A + M + L P+ Y T++Y C+ G+ A E +
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
P T +L+ GL ++ A++L + ++ E ++ T+ + G
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 9/277 (3%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++ ++YG + A F E+ L ++ +N LL L + + +++ +E
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
GI PD+ TY ++ C+ S A EM + ++ ++ ++ + G E K
Sbjct: 436 INE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG---ELK 491
Query: 232 YEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D ++ + E G + +YNV + LCKL EA LL +M+S G+ P+ VT
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I+ ++G + ++ + M + GL+P+ Y +++ G E A + E
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
KG +PN T SL+ GL ++ +A + EK
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 36/295 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + EM + +N L+ L+ ++++ K + E KT G+K
Sbjct: 244 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT-GLKV 302
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
TYN +I + + A S+ EM K P +++ + + G K + D + L
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD------------------------ 275
M + V YN I+ C+L +A L D
Sbjct: 363 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 276 -----------EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EM+++G+ P+ VTY+ + G CK G+ A++F+ M + GL +S Y
Sbjct: 423 GELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAY 482
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
T + K GD A +E +AKG+ P+ +V GL + EA EL+
Sbjct: 483 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL YN V+ C+ + A +L +M + P+ ++ +++ + +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ V Y V IH + A EM KG+ PN +TY+ I G
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK ++A F+ M G+ PN Y ++ C G+++ AL K+ + +G P+
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Query: 356 FTTMKSLVTGLAGASKV 372
T +L+ L K+
Sbjct: 689 SCTHSALLKQLGKDCKL 705
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + + S S+ +M + + P+ + ++ ++ +V + M +G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN + S CK K + LL EM +G PN VTY+ I G K G FE+AK
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M +GL ++ Y ++Y G AL +E + KG P T S + GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
Query: 367 AGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAG 399
++S+A ++L ++ +V ++N + G
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYG 383
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 148/364 (40%), Gaps = 43/364 (11%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAHSIILYGQAN--MTEHAVRT 132
+ +++ IN LS+ F + E LKT + + ++ ++YG N M A+
Sbjct: 270 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSA---YTYNPLIYGYFNKGMLAEALSL 326
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM +V +N+ + L + + + + PD+ +YN +I +C
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN-NLLPDVVSYNTLIYGYC 385
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ + E+ + P ++ L+ G ++ + E ++ M G+ +
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEML---------------------------------- 278
Y + ++ CK+ + A+ DEML
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505
Query: 279 -SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+KG P+ + Y+ + G CK GN EEA + + M + G+ P+ Y ++++ + G
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
E ++KG P+ T L+ G AG ++ A ++EK NV T+N +
Sbjct: 566 RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSL 625
Query: 397 EAGL 400
GL
Sbjct: 626 INGL 629
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 1/300 (0%)
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
SI +N L + + + L+ L LQ + I Y Q E A F++M
Sbjct: 332 SILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKS 391
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+R +NAL+ L + E + IE K G+ P ++T+N +I A+ +
Sbjct: 392 RLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN-GVNPSVETFNTLIDAYGRAGQLE 450
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+ IL++M K +KPN S+G++V F K K + +L M + G +YN I
Sbjct: 451 KCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAII 510
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ + +A L ++M S G+ P+ VTY+ I G CK EA++ + N GL+
Sbjct: 511 DAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLA 570
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y T++ C + + AL KE G P+ T + L + L GA +V E + L
Sbjct: 571 PDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENL 630
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+ + + R +N + A +A D E + P+ +YN VI
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A + EM K++ PN ++ ++ G K+ E ++ M R+G+K V
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-----H---------------- 291
YNV + LC+ + E A+LDEM S+ M P+ TYS H
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319
Query: 292 --------------FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G CKDG +A++ + + NSGL + +Y T++ C+ GD
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEI 396
E A ++ ++ P+ T +L+ GL +++EA +L I + K +V+T+N +
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 4/264 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E R + +M H L+ +V +N LL L A E V E + + PD TY+
Sbjct: 240 ESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM-ASRKMVPDGFTYSI 298
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ + DS + S+ E +K +K A + L+ G K+ K +VLQ + G
Sbjct: 299 LFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSG 358
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +YN I+ C++ A ++ +M S+ ++P+ +TY+ I G K EA
Sbjct: 359 LLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAH 418
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M +G++P+ + T++ + G E + KG PN + S+V
Sbjct: 419 DLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAF 478
Query: 367 AGASKVSEAKELIGLVKEKFTKNV 390
K+ EA + ++ + F K+V
Sbjct: 479 CKNGKILEA---VAILDDMFIKDV 499
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 8/315 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++ IN + G +++K+R + + I G+ A EM+
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP--KTYGIKPDLDTYNRVIKAFCESS 195
++ + SV FN L+ A A ++++ FI + G+KP++ +Y ++ AFC++
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAG---QLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNG 482
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +IL +M K + P A + A++ + + + + + M+ G+ + YN
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN 542
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I LCK + +EA+ LLD + + G+ P+ ++Y+ I C N + A + + M
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC 602
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ P+ Y + + G ++ + K VP +V A K E
Sbjct: 603 GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA---KCGEE 659
Query: 376 KELIGLVKEKFTKNV 390
++ L KE K +
Sbjct: 660 SKVEALRKEMSDKGI 674
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 34/233 (14%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL----------LLALTIAKD--------- 160
YG+A E +M E L+ +V ++ ++ L A+ I D
Sbjct: 443 YGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPG 502
Query: 161 ---YKEVKRVFIEFP------------KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
Y + +IE K+ G+ P + TYN +IK C+ S S A +L
Sbjct: 503 AQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLD 562
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+ + P+ S+ L++ + ++ + M + G+K Y + SL
Sbjct: 563 SLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAG 622
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ E + L +ML K + P S Y+ + + K G + + + MS+ G++
Sbjct: 623 RVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKDYKEVKRVFIEFPK 173
I +Y + +M E + F +M + +L V N +L L + EV R EF
Sbjct: 477 IWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF-- 534
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
GIKP + TYN ++ ++C+ +L+EM R+ PN ++ L+ G K+ ++E
Sbjct: 535 --GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 592
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
++ M + G+K YN I+ AEA +L +EM+ KG P TY+ FI
Sbjct: 593 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFI 652
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
YG CK G +A + M + L P+ Y T++Y C+ G+ A E +
Sbjct: 653 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 712
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
P T +L+ GL ++ A++L + ++ E ++ T+ + G
Sbjct: 713 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 759
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 146 GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
G FN LLA ++ + V + G P + TYN I C+ S A L+
Sbjct: 619 GYFNKGLLAEALSLQEEMVLK---------GASPTVATYNSFIYGLCKLGRMSDAMQQLS 669
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+M ++ P+ S+ L+ G+ + + + + + YN + LC+
Sbjct: 670 DMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQG 729
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A+ L EM+++G+ P+ VTY+ + G CK G+ A++F+ M + GL +S Y
Sbjct: 730 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 789
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
T + K GD A +E +AKG+ P+ +V GL + EA EL+
Sbjct: 790 TRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 843
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + + S S+ +M + + P+ + ++ ++ +V + M +G
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN + S CK K + LL EM +G PN VTY+ I G K G FE+AK
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M +GL ++ Y ++Y G AL +E + KG P T S + GL
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655
Query: 367 AGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAG 399
++S+A ++L ++ +V ++N + G
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYG 689
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++ ++YG + A F E+ L ++ +N LL L + + +++ +E
Sbjct: 682 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 741
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
GI PD+ TY ++ C+ S A EM + ++ ++ ++ + G E K
Sbjct: 742 INE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG---ELK 797
Query: 232 YEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
D ++ + E G + +YNV + LCKL EA LL +
Sbjct: 798 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%), Gaps = 8/313 (2%)
Query: 81 AINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
I +L +A + LE + R PD+ H+ I +A+ + A + MD
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMAT---HSMLINELCKADKIQEAQEFLQGMD 436
Query: 138 EH--KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
S ++N+LL +L AK + +F PD+ +Y+ +I FC+
Sbjct: 437 RKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKID 496
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A + +M + PN +++ A + G ++ + D V + M G V Y+
Sbjct: 497 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYS 556
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH RK +A L + M+S+G +PN+VTY+ ++G CK+ +EA + +R M
Sbjct: 557 TLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P+ Y T++Y C G E A+ E ++KG P+ L+ G A K EA
Sbjct: 617 GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 676
Query: 376 KELIGLVKEKFTK 388
K+L ++ + K
Sbjct: 677 KQLFQVMVSRQCK 689
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++SI++ G + E A + +K+M + +V +NA L L + + V+ E
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G PD+ TY+ +I F + A+ + M + +PNA ++ L+ G KE K
Sbjct: 544 VAA-GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ +++ + M G Y ++ C + K +A + DEM+SKG P+ V Y+
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 662
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAK 350
+ GF + G EAK+ +++M + P++ + M+ + K + A+ F +
Sbjct: 663 LLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 722
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA 375
G P+ T SL+ GL G ++SEA
Sbjct: 723 GCSPDLVTYNSLIFGLCGEQRLSEA 747
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+P T + VI+ C++ SA S+L M ++ P+ ++ L+ K +K ++
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 237 KVLQMMER--YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS-KGMKPNSVTYSHFI 293
+ LQ M+R S YN ++SLCK +K +A A+ M+S + P+ V+YS I
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFCK A+K Y+ M + PN + Y + + + G A G +E +A G
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
P+ T +L+ G + A K +A EL ++ N T+N + GL
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGL 597
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN + + A + EM P+ ++ L+ GF K++ +++
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G + YN +H LCK K EA L +M+ +G P+ VTY+ +YGFC
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G E+A + + M + G P+ Y ++ + G A + +++ P+ +
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD--TWNEIEAGL 400
++ GL+ A ++ +A E+ +++ + D T+N + GL
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 71/321 (22%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+ + +H V +N LL L +D K+ +VF E G+ P+ TY ++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVF-EKMVAQGVVPNGFTYAVLV 171
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNAS--------------------SFG-------- 220
++ C +S A EM K KP+++ FG
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 221 -------ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
AL+ F ++K + +K+ + M + G K ++Y+ + + CKL EA L
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 274 LDEMLSKGMKP-NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS----------------- 315
EM + P N+V ++ F+ G CK G E+A + R M S
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIE 351
Query: 316 -----------------GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ P+S +++ +CK G ++AL + I +G+ P+ T
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMAT 411
Query: 359 MKSLVTGLAGASKVSEAKELI 379
L+ L A K+ EA+E +
Sbjct: 412 HSMLINELCKADKIQEAQEFL 432
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S +++G A + A F+ M R + +N LL L E +F +
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G PD TY ++ FC A + EM K P+ ++ L+ GF++ K
Sbjct: 615 ER-GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVTYSH 291
+ ++ Q+M K +N+ I L K ++ +A + + M G P+ VTY+
Sbjct: 674 GEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 733
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
I+G C + EA K ++ + LSP+ + ++ + G Y+ + F
Sbjct: 734 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIRF 785
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 92/249 (36%), Gaps = 39/249 (15%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+T VIK D A + + ++ K + ++ L+ + + +V +
Sbjct: 98 ETVGAVIKHL---RDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEK 154
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY---SHFIYGFCK 298
M G+ Y V + S C R EA EM+ KG KP+S Y + + K
Sbjct: 155 MVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGK 214
Query: 299 DGNFE--------------------------------EAKKFYRIMSNSGLSPNSSVYFT 326
+G F EA K +R M SG P++++Y
Sbjct: 215 EGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSY 274
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVP-NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
MV CK + + A E + P N + ++GL + K+ +A E ++E
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES 334
Query: 386 FTKNVDTWN 394
+ + ++
Sbjct: 335 LSSSQPVYD 343
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---P 105
L ES P++ E+ R + DR+ ++ + + +E+ ++ P
Sbjct: 597 LCKESKPDEAHELFRKM-VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP 655
Query: 106 DLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
D+ A++ +L G +A A + F+ M + + + N ++ L+ AK +
Sbjct: 656 DVV-----AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDD 710
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
VF + +G PDL TYN +I C S A + E+DR + P+ +F L+
Sbjct: 711 AVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 148/351 (42%), Gaps = 36/351 (10%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
L+ +I +N L + F+ + +L E++ + + I Y + + E A
Sbjct: 116 LNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEI 175
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M + L+ S+ +NA++ L Y K + IE G+ PD TYN ++ C
Sbjct: 176 MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI-GLSPDTTTYNTLLVESC 234
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM----- 247
+ S A I EM R+ + P+ SF +L+A F + + + M+++G+
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV 294
Query: 248 ----------KSG--------------------VSMYNVRIHSLCKLRKCAEAKALLDEM 277
++G V YN ++ LCK + +A L DEM
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ +G P+ T++ I+G C+DGN +A + M+ + P+ Y T++ CK G+
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
E A I++ PN T L+ VSEA L ++ EK K
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ + E A +E+ + +V N ++ AL + +VK E GI D+
Sbjct: 95 KIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN-GIYADM 153
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I A+C A+ I+ M K +KP+ ++ A++ G K+ +Y +L
Sbjct: 154 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 213
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ + YN + C+ +EAK + EML +G+ P+ V++S I F ++ +
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH 273
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A ++R M GL P++ +Y +++ C+ G+ AL E + +G V + +
Sbjct: 274 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 333
Query: 362 LVTGLAGASKVSEAKELIGLVKEK 385
++ GL +++A +L + E+
Sbjct: 334 ILNGLCKEKMLTDADKLFDEMVER 357
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 40/296 (13%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R L LD +A++ +N L + + +E+ R L + F+ + +++G
Sbjct: 316 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD--FYTFTTLIHGH 373
Query: 123 ---ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE------FPK 173
NMT+ A+ F M + ++ + A+N L+ + ++ ++ FP
Sbjct: 374 CQDGNMTK-ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN 432
Query: 174 --TYGI--------------------------KPDLDTYNRVIKAFCESSDSSSAYSILA 205
TYGI KP L T N VIK +C S DSS A L
Sbjct: 433 HITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLG 492
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M K + P+ S+ L+ GF +E+ + + ME+ G+ + YNV ++ C+
Sbjct: 493 RMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQG 552
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+ EA+ +L +M+ KG+ P+ TY+ I G N EA +F+ M G +P+
Sbjct: 553 RMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 149/315 (47%), Gaps = 7/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG---QANMTEHAV 130
D ++FS I S + + Y ++K + + + +++++G NM E A+
Sbjct: 257 DLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY--TVLMHGYCRNGNMLE-AL 313
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ EM E V A+N +L L K + ++F E + G PD T+ +I
Sbjct: 314 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER-GALPDFYTFTTLIHG 372
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + + A S+ M +++IKP+ ++ L+ GF K + E +++ M +
Sbjct: 373 HCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN 432
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y + I++ C + +EA L D M+ KG+KP VT + I G+C+ G+ +A +F
Sbjct: 433 HITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLG 492
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G++P+ Y T++ + + + A + + +G +P+ T ++ G
Sbjct: 493 RMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQG 552
Query: 371 KVSEAKELIGLVKEK 385
++ EA+ ++ + EK
Sbjct: 553 RMQEAELVLRKMIEK 567
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 7/284 (2%)
Query: 98 LEELKTRPDLQNE----RFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
LE LK R ++ + A++ IL G + M A + F EM E F L
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ + + +F + IKPD+ YN +I FC+ + A + M +
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQR-NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
I PN ++G L+ + + ++ +M G+K + N I C+ ++A
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L M++KG+ P+ ++Y+ I GF ++ N ++A + M GL P+ Y ++
Sbjct: 489 EFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGF 548
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
C+ G + A ++ I KG P+ +T +L+ G ++EA
Sbjct: 549 CRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEA 592
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 183 TYNRVIKAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ +I+ + ++ + + A+ IL K + ++ +L+ G K + E +V
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRS---KGYLVSINACNSLLGGLVKIDWVELAWEVH 106
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ + R G++ V N+ +++LCK K + K+ L EM G+ + VTY+ I +C++
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EEA + M++ GL P+ Y ++ +CK G Y A G E + G P+ TT
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 360 KSLVTGLAGASKVSEAKELIG 380
+L+ SEAKE+ G
Sbjct: 227 NTLLVESCRRDNFSEAKEIFG 247
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 92/229 (40%), Gaps = 19/229 (8%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKS------------------IKPNASSFGALVAGFYK 228
++ F S S A +++ M R+S N F L+ + +
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K + + +++ G ++ N + L K+ A + E++ G++ N T
Sbjct: 61 ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
+ + CKDG F++ K F M +G+ + Y T++ C+ G E A
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEI 396
KG P+ T +++ GL + + AK LI ++ + + T+N +
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ I+ L + + + +E++T RP++ + YG+ + A
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DAS 240
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M E K+ ++ FNAL+ A + E +++ + K I PD+ TYN +I
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLING 299
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K P+ ++ L+ GF K ++ ED ++ + M G+
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L C A+ + +M+S G+ P+ +TYS + G C +G E+A + +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + + +Y TM+ MCK G + FC S+ KG PN T ++++GL
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSK 478
Query: 370 SKVSEAKELIGLVKE 384
+ EA L+ +KE
Sbjct: 479 RLLQEAYALLKKMKE 493
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +M+ K+ V FN ++ +L + + +F E +T GI+P++ TY+ +I
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLI 227
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A +L++M K I PN +F AL+ F KE K+ + K+ M + +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ C + +AK + + M+SK P+ TY+ I GFCK E+ +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS+ GL ++ Y T++ + GD + A K+ ++ G P+ T L+ GL
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 369 ASKVSEAKEL 378
K+ +A E+
Sbjct: 408 NGKLEKALEV 417
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ FN LL A+ K + V + E + GI +L TYN +I FC S S A ++
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLG-EKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M + +P+ + +L+ G+ ++ D ++ M G + + IH L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +EA AL+D M+ +G +PN VTY + G CK G+ + A M + + + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
+ T++ +CK + AL KE KG PN T SL++ L + S+A +L+ ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 383 KEKFTKNVDTWNEI 396
++K N+ T+N +
Sbjct: 248 EKKINPNLVTFNAL 261
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 148
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D A+++L +M+ I+ + F ++ K +D +
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G++ V Y+ I LC + ++A LL +M+ K + PN VT++ I F K+
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA+K + M + P+ Y +++ C + A + ++K P+ T
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ G + +V + EL GLV + T
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I + +S A +++ M ++ +PN ++G +V G K +
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V ++N I SLCK R +A L EM +KG++PN VTYS I
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G + A + I + P+
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SL+ G ++ +AK++ +V + ++DT+N + G
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L ++ SQ L ++ K P+L F+A + E A +
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNALIDAFVKEGKFVE-AEKL 277
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M + + + +N+L+ + + K++F EF + PDLDTYN +IK FC
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGFC 336
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM + + + ++ L+ G + + ++ KV + M G+ +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + LC K +A + D M +K + Y+ I G CK G ++ + +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S G+ PN Y TM+ +C + A K+ G +P+ T +L+
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 373 SEAKELI 379
+ + ELI
Sbjct: 517 AASAELI 523
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ + V ++ I
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I K PN
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
T +L+ K EA++L ++K ++ T+N + G
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ F L++ K +K++ V + + M+R G+ + YN+ I+ C+ + + A AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L +M+ G +P+ VT S + G+C +A M G P++ + T+++ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
A+ + +G PN T +V GL + A L+ + K +V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 393 WNEI 396
+N I
Sbjct: 188 FNTI 191
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 37/311 (11%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T +A++ K+M+E + V A+N ++ +L + E F E GI P++ TY+
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ-GIPPNVVTYS 250
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ FC + A S+ +M +++ PN +F LV G KE + +V +MM
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310
Query: 246 GMKS-----------------------------------GVSMYNVRIHSLCKLRKCAEA 270
G++ V +YN+ I+ CK R+ EA
Sbjct: 311 GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA 370
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
K LL EM + + P++VTYS + GFC+ G + A+K ++ M + GL P+S Y ++
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKN 389
+CK G + A K P+ L+ G+ K+ A+EL L + +
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 390 VDTWNEIEAGL 400
V T+ + +GL
Sbjct: 491 VVTYTVMISGL 501
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 142/309 (45%), Gaps = 13/309 (4%)
Query: 106 DLQNERFHAHSI------ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
DL N R + +++ + + + A +M + L+ + F LL L
Sbjct: 96 DLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKA 155
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+ ++F E K G P L TY +IK C+ +++A +L +M+ K KP+ ++
Sbjct: 156 KIIDAVKLFDEIGKM-GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
++ K+ + + M G+ V Y+ +H C L + EA +L +M+
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+ + PN+VT++ + G CK+G EA++ + +M+ +G+ P++ Y ++ C +
Sbjct: 275 RNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDE 334
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI-- 396
A + KG+ P+ L+ G + +++EAK L+ + T + T++ +
Sbjct: 335 AQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQ 394
Query: 397 ---EAGLPQ 402
+AG PQ
Sbjct: 395 GFCQAGRPQ 403
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 140/336 (41%), Gaps = 11/336 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVR 131
D +A++ I+ L + N + E+ + N +S IL+G N+ + A
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN--VVTYSSILHGFCNLGQLNEATS 267
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
FK+M + + F L+ L E +RVF E G++PD TY+ ++ +
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF-EMMTENGVEPDAYTYSALMDGY 326
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S A + M K P+ + L+ G K + + +L M +
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ + C+ + A+ L EM S G+ P+S+TYS + G CK G+ +EA + +
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA 446
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M S + P+ +Y ++ MC G E A KG P+ T +++GL
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506
Query: 372 VSEAKELI------GLVKEKFTKNVDTWNEIEAGLP 401
+EA E+ G + T NV + G P
Sbjct: 507 SNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDP 542
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ M E A + F M SV +N L+ ++ E K + E + PD
Sbjct: 329 QSQMDE-AQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM-YDRDLTPDT 386
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ +++ FC++ A + EM + P++ ++ L+ G K ++ ++L+
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA 446
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ ++ + +YN+ I +C K A+ L + KG++P+ VTY+ I G K+G
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + +R M +G PNS Y + + GD A+ +E + +G+ + +T +
Sbjct: 507 SNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQM 566
Query: 362 LV 363
L+
Sbjct: 567 LL 568
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 2/270 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M A R F+ M E+ + ++AL+ + E +++F + G P + Y
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF-DIMVGKGFAPSVRVY 354
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+S + A ++L+EM + + P+ ++ L+ GF + + + K+ + M
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG+ Y++ + LCK EA LL M ++P+ Y+ I G C G E
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEA 474
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A++ + + G+ P+ Y M+ + K G A ++ + G +PN T +
Sbjct: 475 ARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQ 534
Query: 365 GLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
G S A LI +V F+ + T+
Sbjct: 535 GFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 39/253 (15%)
Query: 171 FPKTYGIKP--DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA------------ 216
F + GI+P + +N+++ + + S+ S+ +MD +I+PN
Sbjct: 57 FNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCH 116
Query: 217 -------------------------SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
+FG L+ G + K D K+ + + G +
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I LCK+ A LL +M KG KP+ V Y+ I CKD EA F+
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G+ PN Y ++++ C G A K+ I + +PN T LV GL
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Query: 372 VSEAKELIGLVKE 384
+ EA+ + ++ E
Sbjct: 297 ILEARRVFEMMTE 309
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ + A+ F M + SV F LL + K Y + E + GIKPD
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
N VI + C + +S+L M + ++P+ +F L+ G + +++
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+E+ G +S V Y V I+ LCK+ K +EA L +M + PN V YS + G CKDG
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EA MS G+ PN Y ++ +C G ++ A E + G +P+ ++
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLN 290
Query: 361 SLVTGLAGASKVSEAKELIGL------VKEKFTKN 389
LV L K+ +AK +IG V + FT N
Sbjct: 291 ILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYN 325
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ Y+ V+ C+ S A + EM K IKPN ++ L+ G ++++ +
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M + G+ + N+ + LCK K +AK+++ M+ G P+ TY+ I +C
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+EA + + +M + G P+ Y ++++ CK + A+ E I G+ P+ T
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393
Query: 359 MKSLVTGLAGASKVSEAKEL 378
+L+ G + AKEL
Sbjct: 394 WTTLIGGFCQVGRPLAAKEL 413
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 2/263 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L SV F L+ L + D + KT G + D+ TY +I C+ +S A
Sbjct: 142 LEPSVVTFTILINGLCVKGDVGRAVELVDHVEKT-GYRSDVKTYGVLINGLCKMGKTSEA 200
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
L +M+ ++ PN + ++ G K+ + + M G+K + Y I
Sbjct: 201 VGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG 260
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LC + EA +LLDEM+ G+ P+ + + + CK+G +AK M G P+
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y +++ C + A + +++G +P+ SL+ G +++A L+
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380
Query: 381 -LVKEKFTKNVDTWNEIEAGLPQ 402
++K FT +V TW + G Q
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQ 403
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 12/331 (3%)
Query: 76 LAFSIAINKL---SEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAV 130
+ F+I IN L + + ++E+ R D++ + +++ G M T AV
Sbjct: 147 VTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVK-----TYGVLINGLCKMGKTSEAV 201
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++M+E +V ++ ++ L E + +E GIKP+L TY +I+
Sbjct: 202 GWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK-GIKPNLVTYTCLIQG 260
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C A S+L EM + + P+ S LV KE K V+ M G
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I C + EA + + M+S+G P+ V Y+ I+G+CK N +A
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G +P+ + T++ C+ G A G VPN T ++ GL +
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQ 440
Query: 371 KVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+SEA L + K N+ ++ I G+
Sbjct: 441 LLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 1/241 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +N+L+ + E RVF E + G PD+ Y +I +C+ + + A +L
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVF-ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLL 379
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
EM + P+ ++ L+ GF + + ++ M +YG + + + LCK
Sbjct: 380 DEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKS 439
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +EA +L M + N V YS + G C G A + + + GL N Y
Sbjct: 440 QLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAY 499
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
M+ K G + A G +P+ T V GL +++ + + + ++++
Sbjct: 500 TIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRD 559
Query: 385 K 385
K
Sbjct: 560 K 560
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 1/252 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM + + + + N L+ L + K V I F G PD+ TYN +I +C
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV-IGFMILVGEVPDVFTYNSLIDRYC 332
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + M + P+ ++ +L+ G+ K + +L M + G V
Sbjct: 333 LQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVV 392
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I C++ + AK L M G PN T + + G CK EA + M
Sbjct: 393 TWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM 452
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S L N +Y ++ MC G TAL AKG N ++ G A +
Sbjct: 453 EKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLL 512
Query: 373 SEAKELIGLVKE 384
+A++L+ ++E
Sbjct: 513 DKAEDLLSNMEE 524
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N + A R F+ M + A+ +L+ K+ + + E K G P
Sbjct: 331 YCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKV-GFTP 389
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ T+ +I FC+ +A + M + PN + ++ G K + + +
Sbjct: 390 DVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLF 449
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ME+ + + +Y++ + +C K A L + +KG++ N Y+ I GF K
Sbjct: 450 HAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQ 509
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++A+ M +G P+S Y V + + ++ + KG+ + TT
Sbjct: 510 GLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTT 569
Query: 360 KSLVTGLAGASKVSEAKELI 379
+ ++ L+ +E +E +
Sbjct: 570 EMIINYLSTNQGDNELREFL 589
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S IN +A F + L+E++ R + + + I + A+ +
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M H SV + L+ AL + + + + + G P++ TYN +I FC+
Sbjct: 92 RDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTLINGFCK 149
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +M S P+ ++ L+ G+ K+E+ +D K+LQ M +YG +
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + SL K K +A L ML + KP+ T++ I FCK G + A + +++M+
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G P+ Y M+ C+ + A + G P+ T S+V+GL AS+V
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329
Query: 374 EAKEL 378
EA E+
Sbjct: 330 EAYEV 334
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD TY+ +I FC++ D AY +L EM+++ I P+ + + ++ G + +
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+R+ S ++ Y + + +LCK + ++A +L++M+ G PN VTY+ I GFCK
Sbjct: 91 YRDMQRHCAPSVIT-YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
GN +EA + M + SP+ Y ++ CK + +E + G PNF T
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+L+ L + K +A L ++ + K
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 5/283 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIK 178
+ +A + A R EM++ + +N ++ L D V + +
Sbjct: 43 FCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLC---DNGRVDSALVHYRDMQRHCA 99
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY ++ A C+S+ S A IL +M PN ++ L+ GF K ++ +
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M V YN+ I CK + + LL EM+ G +PN +TY+ + K
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G + +A ++M P+ + M+ CK G + A + +G +P+ T
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+++G A+++ +A++L+ + E +V T+N I +GL
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 322
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + +EM ++ + +N L+ +L + Y + + + KP
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL-AQMMLRRDCKP 240
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
T+N +I FC+ AY + M + P+ ++ +++G + + +D ++L
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G V YN + LCK + EA + + + + G + VT S I G CK
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
++A+K R M +G +P+ Y +++ CK + +L F E + KG VP T
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
++ L +++V + L+ + E+
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLER 446
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 2/221 (0%)
Query: 98 LEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
L ++ R D + F + +I ++ + + A F+ M + + +N ++
Sbjct: 229 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 288
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
A + +++ +E G PD+ TYN ++ C++S AY + + +
Sbjct: 289 RANRIDDARQL-LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 347
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
+ L+ G K + +D K+L+ MER G V Y + IH CK + ++ A E
Sbjct: 348 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
ML KG P +TYS I CK + + M G+
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN +I C ++ A +L M P+ ++ ++V+G K + ++
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V +++ G V + I LCK R+ +A+ LL EM G P+ V Y+ I+G
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
FCK +++ F+ M + G P Y ++ +CK K + +G
Sbjct: 392 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N + + + +K EA L L P+S+TYS I GFCK +F++A + M
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+++VY T++ +C G ++AL ++ + + P+ T LV L ++++S+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRHCAPSVITYTILVDALCKSARISD 120
Query: 375 AKELI-GLVKEKFTKNVDTWNEIEAG 399
A ++ +++ NV T+N + G
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLING 146
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ M+ +R S+ ++ L+ L KE +F + + I PD TYN +I FC
Sbjct: 218 MRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFC 277
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A SI M + +PNA ++ L+ G K+ + E V + M R G++
Sbjct: 278 RLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAV 337
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + LC+ E L+ EM KG K + VTY+ + G CKD EA +
Sbjct: 338 SYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKL 397
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ N + Y ++ +C G+ E A G + +G+VP++ L+ GL +V
Sbjct: 398 PSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRV 457
Query: 373 SEAK-ELIGLVKEKFTKNVDTWNEI 396
S+A L GLV F W +
Sbjct: 458 SDATVTLYGLVDTGFMPEARCWARL 482
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
VF E ++ G++PD +Y ++ C + +++ EM +K K + ++ L+ G
Sbjct: 323 VFEEMIRS-GVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGL 381
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K+ + + +L+ + G++ V+ Y + ++ LC + +A LL ML +G P+
Sbjct: 382 CKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHY 441
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ + G C G +A + ++G P + + ++
Sbjct: 442 AASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLI 483
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 138/325 (42%), Gaps = 4/325 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEM 136
++ IN A Q+L L L + + S +L Y +A M HA R F M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSL-LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + ALL L A +E VF+ + PD Y ++ CE+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGM-RADSCAPDTHVYATMVHGLCEAGR 192
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A +L E +PN + AL+ G+ + E KV + M+ V Y
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
IH LCK K A L M+ G++PN VTY+ I G C +G+ + A + +M +G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L PN + ++ +CK E A F + KG N SL+ GL K+ A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 377 ELIG-LVKEKFTKNVDTWNEIEAGL 400
EL+ ++ E F + +++ + GL
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 40/293 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GI 177
Y A EHA++ F+ MD ++ +V + L+ L + +V+R + F + G+
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG---KVERAMVLFSRMVEAGL 278
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED--- 234
+P++ TY +I+ C A+ +L M+ + PN +F L+ K EK E+
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 235 -----------VNKV---------------------LQMMERYGMKSGVSMYNVRIHSLC 262
VN+V +Q M G Y+ I LC
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +K ++A +L++M+ KG++ + VTY+ I ++ E KK + M +G++P+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y V C+ G E A + + +G PN T +L+ G A VS+A
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 6/255 (2%)
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ ++ GQ N + A R M+ + L + F+ L+ AL ++ E ++F+
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC-KREKVEEAQLFLGSL 343
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+K + Y +I C++ +A ++ +M + P+A S+ +L+ G +++K
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+L+ M G+++ Y + I L + K + D+M++ G+ P+ VTY+ F
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ +C++G E+A+ M + G+ PN Y T++ G A + + KGW
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523
Query: 353 VPN---FTTMKSLVT 364
PN +T + LV
Sbjct: 524 KPNEDSYTVLLRLVV 538
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H ++ +++G +A TE A +E + ++ +NAL+ A + + +VF E
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF-E 236
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
P++ TY +I C+S A + + M ++PN ++ AL+ G E
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++L +ME G+ ++V I +LCK K EA+ L ++ KG+K N V Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G + A + + M + G P++ Y +++ +C+ A ++ + K
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 351 G 351
G
Sbjct: 417 G 417
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 6/254 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
N LL+AL + + +++ + P +L TY +I A+C + D +A L
Sbjct: 43 CLNTLLMALARHRMFPDMESLASRMPAR-----NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ + P++ ++ + V G+ + +V +M G Y +H L
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGM 157
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA + M + P++ Y+ ++G C+ G EEA+ ++G PN VY
Sbjct: 158 VREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
++ C G+ E AL + PN T L+ GL + KV A L +V+
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 386 FTKNVDTWNEIEAG 399
NV T+ + G
Sbjct: 278 LEPNVVTYTALIQG 291
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H++S ++ G + A ++M E ++ S + ++ L + K++F +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
T GI PD+ TY ++++CE A S++ +M + + PN ++ L+ G+
Sbjct: 448 MIAT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK---------LRKCAEAK---ALLDEML 278
++M G K Y V + + K + K A+ K LL+++
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ + + YS FI C+ EEAK F+ M N+ L+P+ VY +++
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 7/324 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A +N + L+E+ NE I + Q + E A+
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 410
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M EH V +NAL+ + +F P KP+ TY ++ C
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLCN 466
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A ++AEM + PN +F LV F ++ ++ ++++ M +G +
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + K +A LL ++SKG+ P+ +T+S I K+ EEA + + +
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+ P + VY ++ +CK + + A+ F ++ G +PN +T L+ GLA +
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLK 646
Query: 374 EAKELIGLVKEKFTKNVDTWNEIE 397
EA++L+ ++ ++ V + N IE
Sbjct: 647 EAQDLLSML---CSRGVVSKNLIE 667
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 44/365 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L + ++ + + E+ + + NE I + + M E A++
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 305
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVI 188
++M EH+ A N L + I K+ RV F+ +YG PD +Y V+
Sbjct: 306 QQMTEHEC-----ATNTTLCNIVINSICKQ-GRVDDAFKFLNNMGSYGCNPDTISYTTVL 359
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C + + A +L EM R + PN +F + ++ E +++ M+ +G
Sbjct: 360 KGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCT 419
Query: 249 SGVSMYNVRIHS--------------------------------LCKLRKCAEAKALLDE 276
GV YN ++ LC + A L+ E
Sbjct: 420 VGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAE 479
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
ML + PN VT++ + FC+ G +EA + M G +PN Y T+ + K
Sbjct: 480 MLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCS 539
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNE 395
E AL ++KG P+ T S++ L+ +V EA ++ L ++ +N+
Sbjct: 540 SEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNK 599
Query: 396 IEAGL 400
I GL
Sbjct: 600 ILLGL 604
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ TY +++A C++S A ++L EM K PN ++ ++ G +E + +D
Sbjct: 172 GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 231
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L + YG + Y + LC ++ + + L EM+ K PN VT+ I
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + + M+ + N+++ ++ +CK G + A F + G P+
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + ++AKEL+ +V+ N T+N
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFN 391
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A R + + V A+N L+ +R+ P + PD TY
Sbjct: 91 TSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP----VAPDAYTYT 146
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C+ + A S+L +M R+ +PN ++ L+ K +E VL M
Sbjct: 147 PLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAK 206
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YNV I+ +C+ + +A+ LL+ + S G +P++V+Y+ + G C +++
Sbjct: 207 GCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDV 266
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ + M PN + ++ F C+GG E A+ ++ N T ++
Sbjct: 267 EELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINS 326
Query: 366 LAGASKVSEA 375
+ +V +A
Sbjct: 327 ICKQGRVDDA 336
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 42/305 (13%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTI---AKDYKEV-KRVFIEFPKTYGIKPDLD 182
E A+ EM ++ +N ++ + D +++ R+F +YG +PD
Sbjct: 194 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLF-----SYGCQPDTV 248
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+Y ++K C S + AEM K+ PN +F L+ F + E +VLQ M
Sbjct: 249 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM 308
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ + ++ N+ I+S+CK + +A L+ M S G P++++Y+ + G C+ +
Sbjct: 309 TEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERW 368
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL--------------------- 341
+AK+ + M + PN + T + +C+ G E A+
Sbjct: 369 NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNAL 428
Query: 342 --GFCKESIAKGWV---------PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKN 389
GFC + + PN T +L+TGL A ++ A EL+ ++ N
Sbjct: 429 VNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488
Query: 390 VDTWN 394
V T+N
Sbjct: 489 VVTFN 493
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ ++I+ C +S A +L + + ++ LVAG+ + Y +
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR---YGHL 126
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +++ + Y I LC + A+A +LLD+ML +G +PN VTY+ +
Sbjct: 127 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ FE+A M G +PN Y ++ MC+ G + A + G P+
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +L+ GL + + + +EL + EK
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEK 276
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ YN ++ +C +A ++ M + P+A ++ L+ + D
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADA 161
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L M R G + V Y V + ++CK +A A+LDEM +KG PN VTY+ I G
Sbjct: 162 LSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 221
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G ++A+ + + G P++ Y T++ +C ++ E + K +PN
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKE 384
T L+ V A +++ + E
Sbjct: 282 EVTFDMLIRFFCRGGMVERAIQVLQQMTE 310
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMME----RYGMKSGVSMYNVRIHSLCKLRK 266
++ PN +S A + ED+ +++E R G V + I +LC+ +
Sbjct: 36 NVAPNPAS-----ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGR 90
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
++A +L G + Y+ + G+C+ G+ + A+ R++ + ++P++ Y
Sbjct: 91 TSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMPVAPDAYTYTP 147
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
++ +C G AL + + +G PN T L+ + S +A ++ ++ K
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG 207
Query: 386 FTKNVDTWNEIEAGL 400
T N+ T+N I G+
Sbjct: 208 CTPNIVTYNVIINGM 222
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ I+ L + + + +E++T RP++ + YG+ + A
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DAS 239
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M E K+ ++ FNAL+ A + E +++ + K I PD+ TYN +I
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLING 298
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K P+ ++ L+ GF K ++ ED ++ + M G+
Sbjct: 299 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 358
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L C A+ + +M+S G+ P+ +TYS + G C +G E+A + +
Sbjct: 359 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 418
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + + +Y TM+ MCK G + FC S+ KG PN T ++++GL
Sbjct: 419 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSK 477
Query: 370 SKVSEAKELIGLVKE 384
+ EA L+ +KE
Sbjct: 478 RLLQEAYALLKKMKE 492
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +M+ K+ V FN ++ +L + + +F E +T GI+P++ TY+ +I
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLI 226
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A +L++M K I PN +F AL+ F KE K+ + K+ M + +
Sbjct: 227 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 286
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ C + +AK + + M+SK P+ TY+ I GFCK E+ +
Sbjct: 287 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 346
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS+ GL ++ Y T++ + GD + A K+ ++ G P+ T L+ GL
Sbjct: 347 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 406
Query: 369 ASKVSEAKEL 378
K+ +A E+
Sbjct: 407 NGKLEKALEV 416
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 89 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 147
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D A+++L +M+ I+ + F ++ K +D +
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G++ V Y+ I LC + ++A LL +M+ K + PN VT++ I F K+
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA+K + M + P+ Y +++ C + A + ++K P+ T
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ G + +V + EL GLV + T
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 361
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I + +S A +++ M ++ +PN ++G +V G K +
Sbjct: 109 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 168
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V ++N I SLCK R +A L EM +KG++PN VTYS I
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G + A + I + P+
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SL+ G ++ +AK++ +V + ++DT+N + G
Sbjct: 289 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L ++ SQ L ++ K P+L F+A + E A +
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNALIDAFVKEGKFVE-AEKL 276
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M + + + +N+L+ + + K++F EF + PDLDTYN +IK FC
Sbjct: 277 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGFC 335
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM + + + ++ L+ G + + ++ KV + M G+ +
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + LC K +A + D M +K + Y+ I G CK G ++ + +
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S G+ PN Y TM+ +C + A K+ G +P+ T +L+
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515
Query: 373 SEAKELI 379
+ + ELI
Sbjct: 516 AASAELI 522
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 179 PDLDTYNRVIKAFCESS--DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
P + +N+++ A + D + ++L +M + +P+ + +L+ G+ ++ D
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G + + IH L K +EA AL+D M+ +G +PN VTY + G
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G+ + A M + + + ++ T++ +CK + AL KE KG PN
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T SL++ L + S+A +L+ ++++K N+ T+N +
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 2/284 (0%)
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-FIEFPKTYG 176
I +G+ + A+ F M + + S+ FN LL A+ K + V + + G
Sbjct: 15 ISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLG 74
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M + G + + Y V ++ LCK A LL++M + ++ + V ++ I
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK + ++A ++ M G+ PN Y +++ +C G + A + I K PN
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254
Query: 357 TTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
T +L+ K EA++L ++K ++ T+N + G
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 298
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 7/322 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
A S +N L E+N + ++L L ++ L E IL F+ +
Sbjct: 166 AISTCLNLLVESNQVDLTRKFL--LNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVV 223
Query: 137 DEHKLRH----SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+E K H ++ ++ L+ L + KE +F E I PD TYN +I FC
Sbjct: 224 EEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFC 283
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A I+ M + PN ++ AL+ GF KE + E+ +V M+ G+K
Sbjct: 284 HGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTV 343
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ C+ + EA LL +M + ++VT++ + G C++G FEEA+ +
Sbjct: 344 GYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL 403
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ N + Y ++ +C+ G+ + A + +G +P+F T L+ L A KV
Sbjct: 404 PYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKV 463
Query: 373 SEA-KELIGLVKEKFTKNVDTW 393
+A L+GL++ F ++W
Sbjct: 464 GDAVMALLGLLELGFKPEPNSW 485
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 92/225 (40%), Gaps = 11/225 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFH 113
KI+E + P + +S +N + + +E+K+ +PD +
Sbjct: 293 KIMEFMKKNGCNP----NVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVG---Y 345
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + +A + A+ K+M E+K R FN +L L ++E + + P
Sbjct: 346 TTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPY 405
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ + +Y V+ + C + A ++ M + + P+ ++ L+ + K
Sbjct: 406 E-GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVG 464
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
D L + G K + + + + +C+ RK A LLD+++
Sbjct: 465 DAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 3/265 (1%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+DEH + + +N+L+ + + E R+ E + G +P++ TYN +I C+S
Sbjct: 183 IDEHIMPNCT-TYNSLIHGYLSSGQWTEAVRILKEMSRD-GQRPNVVTYNMLIDCLCKSG 240
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A I M + KP+A+++G+L+ G+ E ++N V +M + GM+S ++
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I++ CK + EA +M G P+ VTY+ I G CK G ++A + M +
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GLSPN + T+++ G +E A E + +G P+ T +++ L KV+EA
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420
Query: 376 KELIGLVKEKFTK-NVDTWNEIEAG 399
++L L+ K NV ++N + G
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHG 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 163 EVKRVFIEFPKT--YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+V + + F K +GI P++ T N VI C+ A ++L +M + I PN +++
Sbjct: 136 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 195
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+L+ G+ ++ + ++L+ M R G + V YN+ I LCK AEA+ + + M+
Sbjct: 196 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQS 255
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY-ET 339
G KP++ TY ++G+ +GN E +M +G+ N + +Y CK G E
Sbjct: 256 GPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEA 315
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEA 398
+L F K G++P+ T +++ GL ++ +A ++ + + N+ T+ +
Sbjct: 316 SLTFIKMQ-QLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374
Query: 399 G 399
G
Sbjct: 375 G 375
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 6/251 (2%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
LR AF LL L K + + + G PD+ +Y+ ++K C A
Sbjct: 44 LRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEA 103
Query: 201 YSILAEM--DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
++ M D + P+ S+ ++ GF+KE + M +G+ V N I
Sbjct: 104 AELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVI 163
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
LCK++ +A+A+L +M+ + + PN TY+ I+G+ G + EA + + MS G
Sbjct: 164 DGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 223
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
PN Y ++ +CK G + A I G P+ TT SL+ G A + E
Sbjct: 224 PNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNN- 282
Query: 379 IGLVKEKFTKN 389
VK+ +N
Sbjct: 283 ---VKDLMVQN 290
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-V 235
+ PD+ T+ +I C++ + ++ L ++ + ++ +A +F L+ +++ D +
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG--MKPNSVTYSHFI 293
N VL+ M G V Y+ + LC +KC EA L+ M G P+ V+YS I
Sbjct: 69 NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+GF K+G+ +A + M + G+ PN +++ +CK + A ++ I + +
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
PN TT SL+ G + + +EA ++ + ++ NV T+N
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYN 230
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 24/263 (9%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ +R + F+ + A E FI+ + G PD+ TY VI C+
Sbjct: 287 MVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKM-QQLGFMPDIVTYTTVIDGLCKIG 345
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVSMY 254
A S +M + PN +F L+ GF K+E ++ +MM+R G+ V+++
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDR-GIPPDVTIF 404
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
I L K K EA+ L D M G KPN V+Y+ I+G+ G E K M
Sbjct: 405 TAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 464
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
GL P + + T++ M ++ G P+ T K+L+ ++
Sbjct: 465 IGLKPTAVTFNTLLDGM----------------VSMGLKPDVDTCKTLIDSCCEDGRI-- 506
Query: 375 AKELIGLVKEKFTK--NVDTWNE 395
++++ L +E K DT E
Sbjct: 507 -EDILTLFREMLGKADKTDTITE 528
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 23/218 (10%)
Query: 74 DRLAFSIAINKLSEANYFN-GISQYLEELKT--RPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ L + + +S++ + + P++ H +YG+ E A
Sbjct: 330 DIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW---EKAE 386
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F EM + + V F A++ L E +++F P+ G KP++ +YN +I
Sbjct: 387 ELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA-GAKPNVVSYNTMIHG 445
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + + +L +M +KP A +F L+ G M G+K
Sbjct: 446 YFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPD 489
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
V I S C+ + + L EML K K +++T
Sbjct: 490 VDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 8/328 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPD--LQNERFHAHSIIL--YGQANMTEHAVRT 132
A ++ +++L + + +S + +L+ + L ++I++ Y + +E A R
Sbjct: 151 ALAVCLDRLVSSRCPDVLSDLIADLRDPRNKYLPTPNTCVYNILIKHYVKNGDSETAFRV 210
Query: 133 FKEMDEH---KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
EM E+ +R ++ ++ L+ L A KE +F E + I PD TYN +I
Sbjct: 211 LDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIIN 270
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
FC A +I M + +PNA ++ L+ G ++ + E++ V + M+ G++
Sbjct: 271 GFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEEMKSAGVEP 330
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
Y I LC+ E L+ EM KG K + VTY+ I G CKD EA
Sbjct: 331 DAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEAMDLL 390
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
R + G+ N + Y ++ +C GD E A+G + +G++P++ L+ GL G
Sbjct: 391 RSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASNDLLIGLCGV 450
Query: 370 SKVSEAK-ELIGLVKEKFTKNVDTWNEI 396
+V++A L GL F + W ++
Sbjct: 451 GRVADATVALYGLASVGFKPDTSCWGKL 478
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
R+ E K+ G++PD +Y +I C ++ EM K K + ++ L+ G
Sbjct: 317 RMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEG 376
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K+++ + +L+ + G++ V+ Y + ++SLC +A LL ML +G P+
Sbjct: 377 LCKDKRMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPH 436
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+ + G C G +A +++ G P++S + +V +C+
Sbjct: 437 YAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCR 484
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 102/248 (41%), Gaps = 11/248 (4%)
Query: 74 DRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEH 128
D+L +++ IN +L + + I ++ + + P+ N ++ ++ G + E+
Sbjct: 261 DQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFN-----YATLMNGHSRKGELEN 315
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
F+EM + ++ AL+ L E + E + G K D+ TYN +I
Sbjct: 316 LRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREM-REKGCKADVVTYNLLI 374
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C+ A +L + + ++ N +S+ ++ E +L +M G
Sbjct: 375 EGLCKDKRMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFL 434
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ N + LC + + A+A L + S G KP++ + + C+D + +
Sbjct: 435 PHYAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRSVEL 494
Query: 309 YRIMSNSG 316
++ G
Sbjct: 495 LDVLITEG 502
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 15/319 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER-----FHAHSIILYGQANMTE- 127
D++ F+ +N L + I Q LE + D E+ + ++ ++ G + E
Sbjct: 301 DQVTFNALVNGLCRTGH---IKQGLEMM----DFMLEKGFELDVYTYNSLISGLCKLGEI 353
Query: 128 -HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
AV M + +N L+ L +++ E + G+ PD+ T+N
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLC-KENHVEAATELARVLTSKGVLPDVCTFNS 412
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C +S+ A + EM K P+ ++ L+ E + ++ +L+ ME G
Sbjct: 413 LIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V +YN I LCK + +A+ + D+M G+ +SVTY+ I G CK EEA
Sbjct: 473 CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAA 532
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M GL P+ Y TM+ + C+ GD + A + G P+ T +L+ GL
Sbjct: 533 QLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592
Query: 367 AGASKVSEAKELIGLVKEK 385
A +V A +L+ V+ K
Sbjct: 593 CKAGRVDVASKLLRSVQMK 611
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N E A + + + V FN+L+ L + + +E+ E K G PD T
Sbjct: 386 NHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSN-REIAMELFEEMKEKGCDPDEFT 444
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y+ +I++ C A +L EM+ N + L+ G K + D + ME
Sbjct: 445 YSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQME 504
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ YN I+ LCK ++ EA L+D+M+ +G+KP+ TY+ + FC+ G+ +
Sbjct: 505 MLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIK 564
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A + M+ +G P+ Y T++ +CK G + A + KG V ++
Sbjct: 565 RAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVI 624
Query: 364 TGLAGASKVSEAKELIGLVKEK 385
L + EA L + EK
Sbjct: 625 QALCKRKRTKEAMRLFREMMEK 646
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 35/312 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +SI I L L+E++ +N + I + N A F
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF 500
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M+ + S +N L+ L +K +E ++ + G+KPD TY ++K FC+
Sbjct: 501 DQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQM-IMEGLKPDKFTYTTMLKYFCQ 559
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D A I+ M +P+ ++G L+ G K + + +K+L+ ++ GM
Sbjct: 560 QGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA 619
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I +LCK ++ EA L EM+ KG P+ +TY G C
Sbjct: 620 YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNG-------------- 665
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GG + A+ F E + KG +P F + L GL S
Sbjct: 666 --------------------GGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMED 705
Query: 374 EAKELIGLVKEK 385
+LI +V EK
Sbjct: 706 TLIQLINMVMEK 717
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 159/391 (40%), Gaps = 20/391 (5%)
Query: 11 LNLFSQKHHRYLATSSILSSGDKTPLTSKDKTR---AALTLLKSESNPEKILEICRAAAL 67
L ++ HH + + + ++ K TR AL+LL ++N K++E + +
Sbjct: 134 LETYATSHHLHAEINPLFLLMERD-FAVKPDTRFYNVALSLL-VKANKLKLVETLHSKMV 191
Query: 68 TPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQAN 124
D F+I I L +A+ LE++ RPD E+ + + +
Sbjct: 192 ADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPD---EKTFTTLMQGFIEEA 248
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
E A+R + M E + + N L+ L +E R E G PD T+
Sbjct: 249 DVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE---EEGFCPDQVTF 305
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ C + ++ M K + + ++ +L++G K + ++ ++L M
Sbjct: 306 NALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVS 365
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ YN I +LCK A L + SKG+ P+ T++ I G C N E
Sbjct: 366 RDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREI 425
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + + M G P+ Y ++ +C + AL KE G N +L+
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID 485
Query: 365 GLAGASKVSEAK------ELIGLVKEKFTKN 389
GL ++V +A+ E++G+ + T N
Sbjct: 486 GLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F +M ++ V FN L+ KE K VF K GIKP++ TY ++
Sbjct: 251 AIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ-GIKPNVVTYCSLM 309
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + + A SIL M ++ + P+ S+ L+ GF K +K ++ + + M +
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I LCKL K + A L+DEM +G+ P+ +TYS + CK+ ++A
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + G+ PN Y ++ +CKGG E A ++ + KG+ T ++ G
Sbjct: 430 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489
Query: 369 ASKVSEAKELIGLVKE 384
EA L+ +K+
Sbjct: 490 KGLFDEALALLSKMKD 505
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P++ Y+ +I C+ + A+ + +EM K I PN ++ AL++GF+ + +D
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M +K V +N+ + CK K E K + M+ +G+KPN VTY + G+
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C +AK MS G++P+ Y ++ CK + A+ KE K +P+
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T SL+ GL K+S A +L+
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLV 395
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 136/276 (49%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ + +D + ++ +V ++ ++ + K + ++ E + GI P++ TY+
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM-VSKGISPNVVTYS 236
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I F A + +M ++IKP+ +F LV GF K+ K ++ V MM +
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K V Y + C +++ +AK++L M +G+ P+ +Y+ I GFCK +EA
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ M + + P+ Y +++ +CK G AL E +G P+ T S++
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDA 416
Query: 366 LAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
L +V +A L+ +K++ + N+ T+ + GL
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F M + ++ +V + +L+ + K+ + K + + G+ PD+ +YN +I F
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR-GVNPDIQSYNILIDGF 347
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A ++ EM K I P+ ++ +L+ G K K K++ M G+ +
Sbjct: 348 CKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDI 407
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ + +LCK + +A ALL ++ +G++PN TY+ I G CK G E+A +
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFED 467
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ G + + Y M++ C G ++ AL + +P+ T + ++ L +
Sbjct: 468 LLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE 527
Query: 372 VSEAKEL 378
+A++L
Sbjct: 528 NDKAEKL 534
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D Y +I C+ ++ +A +L +D ++PN + ++ G K++ D
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ V Y+ I + + +A L ++M+ + +KP+ T++ + G
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCKDG +E K + +M G+ PN Y +++ C + A +G P+
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ L+ G KV EA L + K +V T+N + GL
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 17/234 (7%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y+ + F ++D A+S+ + + R++ P A F ++ K + Y V + Q ME
Sbjct: 44 YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQME 103
Query: 244 RYGMKS----------------GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
G+ + I LC + +A D +++ G + + V
Sbjct: 104 FEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQV 163
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y I+G CK G A R + + + PN +Y T++ MCK A E
Sbjct: 164 GYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 223
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
++KG PN T +L++G ++ +A +L ++ E +V T+N + G
Sbjct: 224 VSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 11/236 (4%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLR 142
+ E N I + + PD+Q +++I++ G + + A+ FKEM +
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQ-----SYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
V +N+L+ L ++ E G+ PD+ TY+ ++ A C++ A +
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEM-HDRGVPPDIITYSSILDALCKNHQVDKAIA 428
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L ++ + I+PN ++ L+ G K + ED + + + + G V+ Y V IH C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG-FCKDGNFEEAKKFYRIMSNSGL 317
EA ALL +M P++VTY I F KD N ++A+K R M GL
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDEN-DKAEKL-REMITRGL 542
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 183/419 (43%), Gaps = 52/419 (12%)
Query: 23 ATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEIC-RAAALTPESHLDRLAFSIA 81
AT++++ K S + +A+ L+K E++P++ LEI R A SH + ++
Sbjct: 114 ATTTMVEPRKKPKFISHE---SAINLIKRETDPQRALEIFNRVAEQRGFSH-NNATYATI 169
Query: 82 INKLSEANYFNGISQYLEEL---------------------------------------K 102
++KL+++ F I L ++ +
Sbjct: 170 LHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVR 229
Query: 103 TRPDLQNERFHAHSIILYGQANMT------EHAVRTFKEMDEHKLRH-SVGAFNALLLAL 155
+P L+ + ++ Q+++T + A +EM + + + ++ ++ L+ L
Sbjct: 230 EKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGL 289
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ KE +F E I PD TYN +I FC A I+ M + PN
Sbjct: 290 CGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPN 349
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ AL+ GF KE + E+ +V M+ G+K Y I+ C+ + EA LL
Sbjct: 350 VFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLK 409
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+M + ++VT++ + G C++G FEEA + G+ N + Y ++ +C+ G
Sbjct: 410 DMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREG 469
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTW 393
+ + A + +G +P+F T L+ L A KV +A L+GL++ F ++W
Sbjct: 470 ELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSW 528
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 11/225 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFH 113
KI+E + P + +S +N + + +E+K+ +PD +
Sbjct: 336 KIMEFMKKNGCNP----NVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVG---Y 388
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + +A + A+ K+M E+K R FN +L L ++E + P
Sbjct: 389 TTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPY 448
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ + +Y V+ + C + A ++ M + + P+ ++ L+ + K
Sbjct: 449 E-GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVG 507
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
D L + G K + + + + +C+ RK A LLD+++
Sbjct: 508 DAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 552
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ TY VI A C+ AY +L +M +PN ++ AL+ G + E+ ++
Sbjct: 356 PDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALEL 415
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ +ME+ G+ + Y + H LCKLR+ AK + +E L++G+KPN VTY+ + G+C+
Sbjct: 416 VTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCR 475
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
EA + M + +P+ Y T++ + +G AL E KG+ NF T
Sbjct: 476 GSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDT 535
Query: 359 MKSLVTGLA 367
+ L GLA
Sbjct: 536 LNILARGLA 544
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 148/328 (45%), Gaps = 6/328 (1%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKE 135
A+ I+ L A F + L++++T+ + R HS ++ YG++ + ++ F
Sbjct: 218 AYFTMIDILGRAKMFTELQSLLQKMQTQ-GREITRSMLHSFVMSYGRSGRFKESLEAFNL 276
Query: 136 MDEHKLRHSV--GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M E + A+N++L++L K + +F + G+ + TY +I+ F
Sbjct: 277 MKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINN-GVSCNNLTYTSMIQCFFL 335
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M + + P+ ++ +++ K + E VLQ M G + +
Sbjct: 336 KEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYT 395
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I LC +R+ EA L+ M G+ PN TY+ +G CK + AK+ +
Sbjct: 396 YNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEAL 455
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL PN Y T++ C+G A+ KE P+ T +L+ GL +++
Sbjct: 456 ARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLP 515
Query: 374 EAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+A + ++ K + N DT N + GL
Sbjct: 516 DALRMHDEMENKGYDVNFDTLNILARGL 543
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 46/322 (14%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEH 128
D + ++I I+ L + G+ Q + E P++ + ++ ++ G + E
Sbjct: 357 DVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNI-----YTYNALIQGLCAVRRPEE 411
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ M++ + ++ + L L + K +F E G+KP+ TYN ++
Sbjct: 412 ALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNE-ALARGLKPNRVTYNTLL 470
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK--------------EEKYED 234
+C S A IL EM + P+ ++ L+ G + E K D
Sbjct: 471 NGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYD 530
Query: 235 VN-KVLQMMER--------------------YGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
VN L ++ R G S Y + IH L + EA+AL
Sbjct: 531 VNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQAL 590
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM++KG PN TY+ I GFC+ G ++A M +G+ P++ Y ++
Sbjct: 591 LYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHN 650
Query: 334 GGDYETALGFCKESIAKGWVPN 355
G + A ++ +G V N
Sbjct: 651 QGRTQDADQLYATALERGVVLN 672
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 138/325 (42%), Gaps = 4/325 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEM 136
++ IN A Q+L L L + + S +L Y +A M HA R F M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSL-LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + ALL L A +E VF+ + PD Y ++ CE+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGM-RADSCAPDTHVYATMVHGLCEAGR 192
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A +L E +PN + AL+ G+ + E KV + M+ V Y
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
IH LCK K A L M+ G++PN VTY+ I G C +G+ + A + +M +G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L PN + ++ +CK E A F + KG N SL+ GL K+ A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 377 ELIG-LVKEKFTKNVDTWNEIEAGL 400
EL+ ++ E F + +++ + GL
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 40/293 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GI 177
Y A EHA++ F+ MD ++ +V + L+ L + +V+R + F + G+
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG---KVERAMVLFSRMVEAGL 278
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED--- 234
+P++ TY +I+ C A+ +L M+ + PN +F L+ K EK E+
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 235 -----------VNKV---------------------LQMMERYGMKSGVSMYNVRIHSLC 262
VN+V +Q M G Y+ I LC
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +K ++A +L++M+ KG++ + VTY+ I ++ E KK + M +G++P+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y V C+ G E A + + +G PN T +L+ G A VS+A
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 6/255 (2%)
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ ++ GQ N + A R M+ + L + F+ L+ AL ++ E ++F+
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC-KREKVEEAQLFLGSL 343
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+K + Y +I C++ +A ++ +M + P+A S+ +L+ G +++K
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+L+ M G+++ Y + I L + K + D+M++ G+ P+ VTY+ F
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ +C++G E+A+ M + G+ PN Y T++ G A + + KGW
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523
Query: 353 VPN---FTTMKSLVT 364
PN +T + LV
Sbjct: 524 KPNEDSYTVLLRLVV 538
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H ++ +++G +A TE A +E + ++ +NAL+ A + + +VF E
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF-E 236
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
P++ TY +I C+S A + + M ++PN ++ AL+ G E
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++L +ME G+ ++V I +LCK K EA+ L ++ KG+K N V Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G + A + + M + G P++ Y +++ +C+ A ++ + K
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 351 G 351
G
Sbjct: 417 G 417
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 18/306 (5%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H++S ++ G + A ++M E ++ S + ++ L + K++F +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
T GI PD+ TY ++++CE A S++ +M + + PN ++ L+ G+
Sbjct: 448 MIAT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK---------LRKCAEAK---ALLDEML 278
++M G K Y V + + K + K A+ K LL+++
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + + YS FI C+ EEAK F+ M N+ L+P+ VY +++ C+
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILT 626
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG--LVKEKFTKNVDTWNEI 396
AL G++P+ + + +++ L AKE+ G L+KE + W +
Sbjct: 627 DALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEI-VWKIL 685
Query: 397 EAGLPQ 402
GL Q
Sbjct: 686 IYGLLQ 691
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 6/254 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
N LL+AL + + +++ + P +L TY +I A+C + D +A L
Sbjct: 43 CLNTLLMALARHRMFPDMESLASRMPAR-----NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ + P++ ++ + V G+ + +V +M G Y +H L
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGM 157
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA A+ M + P++ Y+ ++G C+ G EEA+ ++G PN VY
Sbjct: 158 VREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
++ C G+ E AL + PN T L+ GL + KV A L +V+
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 386 FTKNVDTWNEIEAG 399
NV T+ + G
Sbjct: 278 LEPNVVTYTALIQG 291
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 54/240 (22%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV------------ 223
G+ P+L TYN +I+ + S A+S M K KPN S+ L+
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK------------ 271
+K +D+ +L+ + + +Y+ I LC++ + EAK
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606
Query: 272 -----------------------ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
LLD M G P+ +Y I C+ GNF AK+
Sbjct: 607 PSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGG---DYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + + V+ ++Y + + G ++ + L KE G+ P+ T+ +++TG
Sbjct: 667 FGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE---HGYQPS-NTINAMITG 722
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/283 (18%), Positives = 105/283 (37%), Gaps = 19/283 (6%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
P+KI + A + P D + +++ + E + ++ R N +
Sbjct: 440 GPKKIFDKMIATGINP----DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTY 495
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK-------------D 160
I Y + A TF+ M + + ++ +LL L + K D
Sbjct: 496 NTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT-VLLRLVVKKSSSDNSVDIWKIAD 554
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
K+++ V +E + D Y+ I+ C A M ++ P+ +
Sbjct: 555 MKDLQ-VLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+++ + + D +L M + G + Y + I SLC+ AK + ++L K
Sbjct: 614 SIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLK 673
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ + + IYG + G+ E +M G P++++
Sbjct: 674 ESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI 716
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 103 TRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
T P + + +SI++ +A + A F + ++ V ++LL L AK
Sbjct: 94 TGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKR 153
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL--AEMDRKSIKPNASS 218
E V G PD +Y+ V+K+ C+ S A IL A N
Sbjct: 154 TDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVV 213
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ +V G +KE K + + M + G+ V YN IH+LCK R +A+ +L +M+
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV 273
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G++P++VTY+ I+G+ G +++A + ++ M++ G+ PN+ T V F+CK G E
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIE 333
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIE 397
A F +AKG N + +L+ G A A + + L L V++ N +N +
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393
Query: 398 AG 399
G
Sbjct: 394 NG 395
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 113 HAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +I++ Y + M A+ F++M + L V + A++ A + F
Sbjct: 387 HVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNH 446
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G++P+ Y +I+ FC D A ++ E+ K + P SF +L+ KE
Sbjct: 447 MIDK-GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + ++ M+ R G K+ V+++ I C + K +EA + D M+S G++P+ VTY
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYG 565
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ G CK+G ++ +R + + G+ P + Y ++ + G A +E I
Sbjct: 566 TLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIES 625
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEA 375
G T L+TGL + EA
Sbjct: 626 GIAVTIPTYSILLTGLCRNNCTEEA 650
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM + + +V +N+++ AL A+ + + + + G++PD TYN +I
Sbjct: 230 ACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGN-GVQPDNVTYNTLI 288
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ A + EM + + PN + VA K + E+ + M G K
Sbjct: 289 HGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHK 348
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ +H + L + M+ G+ PN ++ + G+ K G EA
Sbjct: 349 LNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFI 408
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M GL+P+ Y +++ C+ G + A+ I KG PNF + L+ G
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT 468
Query: 369 ASKVSEAKELIGLVKEK 385
+ +A+EL+ ++ K
Sbjct: 469 HGDLVKAEELVYEIRNK 485
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ +E +F + K G+ PD+ TY VI AFC A
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKR-GLNPDVLTYLAVIHAFCRMGSMDDAMDKFNH 446
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K ++PN + + L+ GF +++ + G+ + + I+ LCK +
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA+ + D ++ G K + ++ I G+C G EA + + M + G+ P+ Y T
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
+V CK G + L +E + KG P T ++ GL A + + AKE+ +++
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626
Query: 386 FTKNVDTWNEIEAGL 400
+ T++ + GL
Sbjct: 627 IAVTIPTYSILLTGL 641
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 11/269 (4%)
Query: 124 NMTEHAVRTFKEMDEHK--LRHSVG--------AFNALLLALTIAKDYKEVKRVFIEFPK 173
N HA+ + +D+ + LR VG +N L+ + +K+ R+F E
Sbjct: 250 NSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEM-T 308
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+ P+ T + + C+ A M K K N S+ L+ G+
Sbjct: 309 SRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLV 368
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
D++ + +M R G+ ++N+ ++ K EA + ++M +G+ P+ +TY I
Sbjct: 369 DMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVI 428
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+ FC+ G+ ++A + M + G+ PN +VY ++ C GD A E KG
Sbjct: 429 HAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG 488
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLV 382
P + SL+ L +V EA+ + ++
Sbjct: 489 PCILSFASLINHLCKEGRVFEAQRIFDMI 517
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 8/297 (2%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPD--LQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
A+ K + GI + + +PD N H +S + GQ + AVR FKEM
Sbjct: 255 ALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTL--GQ---WKQAVRMFKEMTS 309
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+ + + + A E R F + G K ++ +Y+ ++ + +
Sbjct: 310 RGVIPNTVTCSTFV-AFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLV 368
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
++ M R I PN F LV G+ K + + + M++ G+ V Y I
Sbjct: 369 DMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVI 428
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
H+ C++ +A + M+ KG++PN Y I GFC G+ +A++ + N GL
Sbjct: 429 HAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG 488
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
P + +++ +CK G A I G + SL+ G K+SEA
Sbjct: 489 PCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEA 545
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 1/214 (0%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E +R+F +T G K D++ + +I +C S A+ + M I+P+ ++G L
Sbjct: 509 EAQRIFDMIIRT-GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
V G K + +D + + + G+K Y + + L + A AK + EM+ G+
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
TYS + G C++ EEA ++ + + + + M+ M K E A G
Sbjct: 628 AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEG 687
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
G VP T ++ L V EA+
Sbjct: 688 LFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAE 721
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP TY ++ + +++A + EM I ++ L+ G + E+
Sbjct: 591 GVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEA 650
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
V Q + +K + + N+ I + K R+ EA+ L + G+ P TY+ +
Sbjct: 651 ITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMEN 710
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
K+G+ EEA+ + +M SGLSP S +V + + G+ A
Sbjct: 711 LIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 138/325 (42%), Gaps = 4/325 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEM 136
++ IN A Q+L L L + + S +L Y +A M HA R F M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSL-LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + ALL L A +E VF+ + PD Y ++ CE+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGM-RADSCAPDTHVYATMVHGLCEAGR 192
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A +L E +PN + AL+ G+ + E KV + M+ V Y
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
IH LCK K A L M+ G++PN VTY+ I G C +G+ + A + +M +G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L PN + ++ +CK E A F + KG N SL+ GL K+ A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 377 ELIG-LVKEKFTKNVDTWNEIEAGL 400
EL+ ++ E F + +++ + GL
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 40/293 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GI 177
Y A EHA++ F+ MD ++ +V + L+ L + +V+R + F + G+
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG---KVERAMVLFSRMVEAGL 278
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED--- 234
+P++ TY +I+ C A+ +L M+ + PN +F L+ K EK E+
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 235 -----------VNKV---------------------LQMMERYGMKSGVSMYNVRIHSLC 262
VN+V +Q M G Y+ I LC
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +K ++A +L++M+ KG++ + VTY+ I ++ E KK + M +G++P+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y V C+ G E A + + +G PN T +L+ G A VS+A
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 6/255 (2%)
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ ++ GQ N + A R M+ + L + F+ L+ AL ++ E ++F+
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC-KREKVEEAQLFLGSL 343
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+K + Y +I C++ +A ++ +M + P+A S+ +L+ G +++K
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+L+ M G+++ Y + I L + K + D+M++ G+ P+ VTY+ F
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ +C++G E+A+ M + G+ PN Y T++ G A + + KGW
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523
Query: 353 VPN---FTTMKSLVT 364
PN +T + LV
Sbjct: 524 KPNEDSYTVLLRLVV 538
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H ++ +++G +A TE A +E + ++ +NAL+ A + + +VF E
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF-E 236
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
P++ TY +I C+S A + + M ++PN ++ AL+ G E
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++L +ME G+ ++V I +LCK K EA+ L ++ KG+K N V Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G + A + + M + G P++ Y +++ +C+ A ++ + K
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 351 G 351
G
Sbjct: 417 G 417
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 6/254 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
N LL+AL + + +++ + P +L TY +I A+C + D +A L
Sbjct: 43 CLNTLLMALARHRMFPDMESLASRMPAR-----NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ + P++ ++ + V G+ + +V +M G Y +H L
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGM 157
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA A+ M + P++ Y+ ++G C+ G EEA+ ++G PN VY
Sbjct: 158 VREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
++ C G+ E AL + PN T L+ GL + KV A L +V+
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 386 FTKNVDTWNEIEAG 399
NV T+ + G
Sbjct: 278 LEPNVVTYTALIQG 291
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+ TY +I S I +M I P+ ++ V + +E + ED
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476
Query: 236 -NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ ++QM++R G+ + YN I L ++A + + M+ KG KPN +Y+ +
Sbjct: 477 ESMIVQMVDR-GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLR 535
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSP---NSSVYFTMVYFMCKGG---DYETALGFCKESI 348
K + + + ++I L + V+ ++Y + + G ++ + L KE
Sbjct: 536 LVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE-- 593
Query: 349 AKGWVPNFTTMKSLVTG 365
G+ P+ T+ +++TG
Sbjct: 594 -HGYQPS-NTINAMITG 608
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 7/221 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPNASSFGALVAGFYKEEKYED 234
G++P+ TY ++ C+ D+ SA ++L +M+ S IKPN + A++ G +K+ ++ D
Sbjct: 208 GLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSD 267
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ + M+ G+ + YN I C + +EA+ LL EML + + PN VTYS I
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+ K+ F EA++ Y M G+ PN+ Y +M+ CK + A KG P
Sbjct: 328 AYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP 387
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+ T +L+ G GA ++ + EL+ GLV + T N
Sbjct: 388 DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYN 428
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 2/254 (0%)
Query: 126 TEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E ++ +V ++A++ L + + ++ E + GI PDL TY
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK-GIFPDLFTY 287
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I PN ++ AL+ + KE K+ + ++ M
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ YN I CK + A+ + M +KG P+ T++ I G+C ++
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M+ +GL +++ Y T+++ C GD AL ++ I+ G P+ T +L+
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467
Query: 365 GLAGASKVSEAKEL 378
GL K+ +A E+
Sbjct: 468 GLCDNGKLKDALEM 481
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 12/271 (4%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + EM E L +N L+ + D + + + G+ P
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCP 457
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T N ++ C++ A + M + ++P+ ++ L++G
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLIN 517
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I+ LCK + EA + D M SK P+ VT
Sbjct: 518 EGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVT 577
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ + G+CK G ++ + + M G+ ++ Y T+++ K G+ AL +E I
Sbjct: 578 FNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI 637
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G P+ T++S++T L ++ A ++
Sbjct: 638 SSGVYPDTITIRSMLTVLWSKEELKRAVAML 668
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 48/314 (15%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EM E + + +N ++ + + E +R+ E + I P++ TY+ +I A+
Sbjct: 272 YTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK-INPNVVTYSALINAYV 330
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + EM + I PN ++ +++ GF K+ + + + +M G V
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I C ++ + LL EM G+ ++ TY+ I+GFC G+ A + M
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETAL------------------------------- 341
+SG+ P+ T++ +C G + AL
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510
Query: 342 ---GFC------------KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
G KE +G VPN T S++ GL S++ EA ++ + K
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570
Query: 386 FTKNVDTWNEIEAG 399
F+ +V T+N + +G
Sbjct: 571 FSPDVVTFNTLVSG 584
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + +N+++ S+ +M+RK I + SF L+ F K
Sbjct: 75 PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + G + V ++ +H LC + +EA L +M +PN VT++ + G C+
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC----RPNVVTFTTLMNGLCR 190
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFT 357
+G EA M GL PN Y T+V MCK GD +AL ++ + PN
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK 385
+++ GL + S+A L ++EK
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEK 278
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 6/213 (2%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F E A + ++M R P+ F L+ + E+ + V + Q MER +
Sbjct: 51 GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V +N+ I C K A + ++ G +P+ VT+S ++G C + EA +
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M PN + T++ +C+ G A+ + G PN T ++V G+
Sbjct: 171 HQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226
Query: 370 SKVSEAKELIGLVKE--KFTKNVDTWNEIEAGL 400
A L+ ++E NV ++ I GL
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL 259
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLR 142
L + FNG+ PD+Q ++I++ G N + A +KEM +
Sbjct: 492 LDASRPFNGV---------EPDVQ-----TYNILISGLINEGKFLEAEELYKEMPHRGIV 537
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+ +++++ L E ++F + + PD+ T+N ++ +C++
Sbjct: 538 PNTITYSSMINGLCKQSRLDEATQMF-DSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+ EM R+ I +A ++ L+ GF K ++N L + + + SGV + I S+
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGF---RKVGNINGALDIFQEM-ISSGVYPDTITIRSM 651
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 152/337 (45%), Gaps = 7/337 (2%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
+L+ ++P K E A+ +H D ++ + ++ L N +L ++ R +
Sbjct: 33 VLRFIASPPKAFEFFNWASRNGFAH-DSRSYFMMLDILGRNGNLNIARNFLFSIERRSNG 91
Query: 108 Q---NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
+RF + YG A + A++ F M + SV FN+LLL L
Sbjct: 92 SVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMA 151
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
VF E TYG+ PD T+N +I+ FC++S + EM R + +P+ ++ LV
Sbjct: 152 HSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVD 211
Query: 225 GFYKEEKYEDVNKVLQMMER--YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
G + K + V++ M + + V Y + C ++ EA + +EM+S+G+
Sbjct: 212 GLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL 271
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KPN +TY+ I G C+ F++ K+ + G P++ Y T++ C G+++ AL
Sbjct: 272 KPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEAL 331
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
K+ P+ T L+ L A++L
Sbjct: 332 KMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQL 368
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 118/280 (42%), Gaps = 9/280 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A+ F+EM L+ + +N L+ L + + ++K + G P
Sbjct: 250 YCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVP 309
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++ A C++ + A + +M ++P+++++ L+ + +E ++
Sbjct: 310 DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLF 369
Query: 240 Q-------MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ G V+ YN LCK K +A+ + +++ KG + + +Y
Sbjct: 370 DKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTL 428
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK+G FE K M P+ Y ++ + G+ A + + +
Sbjct: 429 IIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSY 488
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVD 391
+P + S+++ L E+ + L + K +N++
Sbjct: 489 LPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNIN 528
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 7/200 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE-KYEDVNK 237
PD +TY +I F + + AY L M + S P S F ++++ K + E +
Sbjct: 455 PDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASF 514
Query: 238 VLQMMERYGMKS-GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
V+ M++R ++ +S + +R+ LR +A +++ + G V I
Sbjct: 515 VVLMIDRKIRQNINLSTHTMRLLFGSGLR--IKAFQIVELLYDNGYM---VDMEELIGFI 569
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C++G +A+K G + + +V ++ +CK A G + K
Sbjct: 570 CQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQL 629
Query: 357 TTMKSLVTGLAGASKVSEAK 376
+ ++ L T L + EAK
Sbjct: 630 SCLEGLRTALEAGGRSEEAK 649
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F +M + + S+ FN LL A+ ++ V + E +T GI DL TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG-EQMQTLGISHDLYTYS 122
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
I FC S S A ++LA+M + +P+ + +L+ G+ ++ D ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + IH L K +EA AL+D+M+ +G +P+ VTY + G CK G+ + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M + + N ++ T++ +CK E A+ E KG PN T SL+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
L + S+A L+ ++++K NV T+N +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 8/319 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
NK SEA + Q ++ +PDL + + G ++ A+ +M+ +++
Sbjct: 202 NKASEAVAL--VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDL---ALNLLNKMEAARIK 255
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V FN ++ +L + + +F E +T GI+P++ TYN +I C S A
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L+ M K I PN +F AL+ F+KE K + K+ + M + + YN+ I+ C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ EAK + M+SK PN TY+ I GFCK E+ + +R MS GL N+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-L 381
Y T++ + GD ++A K+ ++ + T L+ GL K+ A + L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 382 VKEKFTKNVDTWNEIEAGL 400
K + N+ +N + G+
Sbjct: 495 QKSEMELNIFIYNTMIEGM 513
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 144/326 (44%), Gaps = 13/326 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ I+ L + + E++T RP++ + + YG+ + A R
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS---DASRL 315
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M E K+ +V FNAL+ A E +++ E + I PD TYN +I FC
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFC 374
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + M K PN ++ L+ GF K ++ ED ++ + M + G+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I + C A+ + +M+S + + +TYS ++G C G + A ++ +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + N +Y TM+ MCK G A FC SI P+ T ++++GL
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRL 550
Query: 372 VSEAKELIGLVKEKFT-KNVDTWNEI 396
+ EA +L +KE T N T+N +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+ +I + +S A +++ +M ++ +P+ ++G +V G K +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +K+ V ++N I SLCK R A L EM +KG++PN VTY+ I
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A +E I + P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T L+ G +++ EAK++ +V + N+ T+N + G
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A + FK M ++ +N L+ K ++ +F E + G+ + T
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVT 435
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I+ F ++ D SA + +M + + ++ L+ G K + + + ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ M+ + +YN I +CK K EA D S +KP+ VTY+ I G C +
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA +R M G PNS Y T++ + D + KE + G+V + +T+ SLV
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLV 611
Query: 364 TGL 366
T +
Sbjct: 612 TNM 614
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T + ++ +C S S A +++ +M KP+ +F L+ G + K +
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y ++ LCK A LL++M + +K N V ++ I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + E A + M G+ PN Y +++ +C G + A + K PN
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ K+ EA++L
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKL 350
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
L + K +A L +M+ P+ V ++ + K FE M G+S +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y + C+ AL + + G+ P+ T+ SL+ G + ++S+A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
+V+ + + T+ + GL
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGL 198
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 154/325 (47%), Gaps = 9/325 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L+ L + N +++
Sbjct: 13 KLLDEMRDKGCTP----DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT--VSYN 66
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+L G A E A EM + +V FN L+ L + V + PK
Sbjct: 67 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK- 125
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P+ +YN ++ AFC+ A + L M + P+ S+ L+ + + +
Sbjct: 126 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 185
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L ++ G + YN I L K K EA LL+EM+SKG++P+ +TYS
Sbjct: 186 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 245
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C++ E+A + + + + G+ PN+ +Y ++ +CK + +A+ I G +P
Sbjct: 246 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 305
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N +T L+ GLA + EA++L+
Sbjct: 306 NESTYTILIEGLAYEGLIKEARDLL 330
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
YK+ ++ E + G PD+ TYN V+ C+ A L + +PN S+
Sbjct: 8 YKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 66
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ G E++ED +++ M + G V +N+ I LC+ A +L+++
Sbjct: 67 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 126
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G PNS++Y+ ++ FCK ++A F +M + G P+ Y T++ +C+ G+ + A
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ + KG P + +++ GL A K EA EL+ +V + ++ T++ I AG
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246
Query: 400 L 400
L
Sbjct: 247 L 247
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ EM + + +N ++ + + P +YG +P+ +YN
Sbjct: 9 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNI 67
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+K C + A ++ EM +K PN +F L++ ++ E +VL+ + +YG
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
YN +H+ CK +K +A A LD M+S+G P+ V+Y+ + C+ G + A
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + G +P Y T++ + K G + AL E ++KG P+ T ++ GL
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ +A G V++ + N +N I GL
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 282
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C+ S A +L EM K P+ ++ +V G +E + +D + L+ + YG +
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YN+ + LC + +A+ L+ EM KG PN VT++ I C+ G E A +
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ G +PNS Y +++ CK + A+ F +++G P+ + +L+T L +
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 370 SKVSEAKELIGLVKEKFTKNV-DTWNEIEAGL 400
+V A EL+ +K+K V ++N + GL
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 212
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 1/278 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I + L A + + + E+ + N I + + E A+ ++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ ++ + ++N LL A K + F++ + G PD+ +YN ++ A C S
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKA-MAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A +L ++ K P S+ ++ G K K ++ ++L M G++ + Y+
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
LC+ + +A ++ G++PN+V Y+ I G CK A + M +
Sbjct: 242 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 301
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G PN S Y ++ + G + A E ++G V
Sbjct: 302 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ ++ L + N + +E + + PDL + + G+ ++ A+
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL---AL 225
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M++ K+ V ++ ++ +L + + +F E GI+PD+ TY+ +I
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISC 284
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C S A +L++M + I PN +F +L+ F KE K + K+ M + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN I+ C + EA+ + M+SK P+ VTY+ I GFCK + + +R
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
MS GL N+ Y T+++ + D + A K+ ++ G PN T +L+ GL
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L K K ++ T+N + G+
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ L + + + E+ RPD+ + YG+ + A
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---DAS 295
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R +M E K+ +V FN+L+ A E +++F E + I P++ TYN +I
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLING 354
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A I M K P+ ++ L+ GF K +K D ++ + M R G+
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y IH + C A+ + +M+S G+ PN +TY+ + G CK+G E+A +
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ S + P+ Y M MCK G E FC S+ KG P+ ++++G
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL-KGVKPDVIAYNTMISGFCKK 533
Query: 370 SKVSEAKELIGLVKE 384
EA L +KE
Sbjct: 534 GLKEEAYTLFIKMKE 548
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F EM + + S+ F+ LL A+ K + V F E + G+ +L TYN
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYNI 105
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C S S A +IL +M + P+ + +L+ GF + + ++ M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + +H L + K +EA AL++ M+ KG +P+ VTY I G CK G + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + +Y T++ +CK + AL E KG P+ T SL++ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T+N +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ ++ + + +S A +++ M K +P+ ++GA++ G K + +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME+ +++ V +Y+ I SLCK R +A L EM +KG++P+ TYS I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + +++ K G A E I + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
T SL+ G ++ EA+++ L V + +V T+N + G
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 137/324 (42%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S I+ L ++ S+ L ++ R N I + + A + F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + ++ +N+L+ + E +++F + PD+ TYN +I FC+
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLINGFCK 392
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + +M R+ + N ++ L+ GF++ ++ V + M G+ +
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + LCK K +A + + + M+P+ TY+ G CK G E+ + +S
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG-LAGASKV 372
G+ P+ Y TM+ CK G E A + G +P+ T +L+ L K
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 373 SEAKELIGLVKEKFTKNVDTWNEI 396
+ A+ + + +F + T+ +
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLV 596
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + T N ++ FC + S A +++ +M +P+ +F LV G ++ K +
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + + Y I+ LCK + A LL++M ++ + V YS I
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A + M N G+ P+ Y +++ +C G + A + + + PN
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T SL+ A K+ EA++L +++ N+ T+N + G
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K EA L EM+ P+ V +S + K F+ F M G+S N Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
M+ +C+ AL + + G+ P+ T+ SL+ G +++SEA L+ +V+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 385 KFTKNVDTWNEIEAGLPQ 402
+ + T+ + GL Q
Sbjct: 165 GYQPDTVTFTTLVHGLFQ 182
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 2/291 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ-ANMTEHAVRTFKEM 136
+ + I++L+ A F + + L + ++ F I +YG AN E A+ T M
Sbjct: 74 YGLMIDRLAGARRFGDVEELLARARAERFRFSDDFFYRLIKMYGNVANHPEKAMETLYAM 133
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
E+ S FN +L L + Y+ V V+ P+ G++ D +N +IK C+
Sbjct: 134 SEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRL-GVELDTCCFNILIKGLCQFGR 192
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A S+L EM ++ +PNA ++ L+ + + ++ ++ + M + + + +YN+
Sbjct: 193 FNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNI 252
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ LC+ + A L M S+G PNS TY + G NF EAK +MS
Sbjct: 253 LVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAES 312
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
L P+ S Y ++ C + A K+ + +G+VP +T L+T L
Sbjct: 313 LRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLLTSLC 363
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 182 DTYNRVIKAFCESSD-SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
D + R+IK + ++ A L M P+ +F ++ +YE V++V
Sbjct: 107 DFFYRLIKMYGNVANHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYS 166
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
R G++ +N+ I LC+ + EA +LLDEM + +PN++TYS ++ C++
Sbjct: 167 SAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNC 226
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA + + M + ++ VY +V +C+ G +A K ++G PN T +
Sbjct: 227 RVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQ 286
Query: 361 SLVTGLAGASKVSEAKELIGLV 382
L+ GL + EAK+L+G++
Sbjct: 287 VLLDGLVASKNFVEAKDLVGMM 308
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
Query: 185 NRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM- 242
N V+K F D++ S+ + R+ KP+ + +G ++ ++ DV ++L
Sbjct: 39 NEVLKIFASIRDAALITSVFRKACARRDYKPSEALYGLMIDRLAGARRFGDVEELLARAR 98
Query: 243 -ERYGMKSG-----VSMY-NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
ER+ + MY NV H +A L M G P++ T+++ ++
Sbjct: 99 AERFRFSDDFFYRLIKMYGNVANHP-------EKAMETLYAMSEYGCWPSTKTFNYVLHM 151
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+E + Y G+ ++ + ++ +C+ G + AL E + PN
Sbjct: 152 LVCRRQYEVVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPN 211
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +L+ L +V EA EL + KE+ + +N + +GL
Sbjct: 212 AMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGL 257
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 139/345 (40%), Gaps = 70/345 (20%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A R E++ ++ FN+L+ IAK + +V + E G+ P
Sbjct: 569 YCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEM-SNRGLSP 627
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ Y +I +C+ D +AY++ EM K + PN +LV+ FY++ K+++ N VL
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVL 687
Query: 240 QMMERYGMKSGVS--------------------------MYNVRIHSLCKLRKCAEAKAL 273
Q + M +S M+N+ I LCKL + +AK L
Sbjct: 688 QNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNL 747
Query: 274 L-----------------------------------DEMLSKGMKPNSVTYSHFIYGFCK 298
L D MLS G+ PN VTY+ IYG CK
Sbjct: 748 LADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCK 807
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G A ++ + G+SPN+ Y T++ CK G A + I +G P T
Sbjct: 808 SGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFT 867
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT-----WNEIEA 398
L+ GL + EA I L+ + NVD W I+
Sbjct: 868 YSILINGLCTQGYMEEA---IKLLDQMIENNVDPNYVTYWTLIQG 909
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 163/355 (45%), Gaps = 38/355 (10%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+N+L++ E+++ L ++ A Y + HA+ +EM + +
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
++ A++A++ + +R+ P G P++ TY ++K +C + A
Sbjct: 275 EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGR-GFSPNIVTYTLLVKGYCNEKNMEEAE 333
Query: 202 SILAEMDR-KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
++ E+ + K + + + FGA++ G+ + + ED ++L M ++ + +YN+ I+
Sbjct: 334 GVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMING 393
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNS---------------------------------- 286
CKL + EA +L EM G++P++
Sbjct: 394 YCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAAT 453
Query: 287 -VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ + GFC G+ ++A + + +M G++PN T++ K G E AL K
Sbjct: 454 TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWK 513
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
E++A+G N TT +++ GL ++ EA+EL+ +K+ + ++ T+ + +G
Sbjct: 514 ETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSG 568
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 95/228 (41%), Gaps = 35/228 (15%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN ++K FC A + M +K I PN S L+ GF+K K E + +
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ + +N I+ LCK+ + EA+ L+D+M P+ +TY G+CK G+
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575
Query: 303 EEAKK---------------FYRI--------------------MSNSGLSPNSSVYFTM 327
+ A + F+ MSN GLSPN+ Y +
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGAL 635
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ CK GD TA E I KG VPN SLV+ K EA
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 135/315 (42%), Gaps = 12/315 (3%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+F + + L+ A +G Q +E++T + R + Q V F++M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVIKAF 191
GA +AK Y +VK V F+E G++ +L Y+ V+ +
Sbjct: 235 QR------AGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY-GMKSG 250
CE ++ A +L + + PN ++ LV G+ E+ E+ V+Q + + +
Sbjct: 289 CEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVD 348
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+++ I+ C++ + +A LL+EM+ ++ N Y+ I G+CK G EA
Sbjct: 349 EAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILH 408
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M+ G+ P++ Y ++V CK G A + G+ T +L+ G
Sbjct: 409 EMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLG 468
Query: 371 KVSEAKELIGLVKEK 385
+ +A L L+ +K
Sbjct: 469 SIDDALRLWFLMLKK 483
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 28/302 (9%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
TE A+ +KE L + FN ++ L + E + + ++ K + PD+ TY
Sbjct: 505 TEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEEL-VDKMKQWRCPPDIITYR 563
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+ +C+ D A IL E++ P F +L+ G + +++ VN +L M
Sbjct: 564 TLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNR 623
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ Y I CK A L EM+ KG+ PN S + F + G F+EA
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683
Query: 306 KKFYRIMSNSGLSPNSS--------------------------VYFTMVYFMCKGGDYET 339
+ + + + P+ S ++ +++ +CK G E
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEA 398
A + KG+V + T SL+ G + + V A +L ++ T N+ T+N +
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIY 803
Query: 399 GL 400
GL
Sbjct: 804 GL 805
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 112/253 (44%), Gaps = 7/253 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
H V +KE S +F+ LL AL A +VF E +T G + + + N +
Sbjct: 161 HLVEVYKEFS-----FSAASFDLLLRALANAGQLDGALQVFDEM-RTLGCRLSMRSCNSI 214
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ ++ D + ++ +M R P+ + + + K + + ++ M + G+
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ + Y+ ++ C++ + +A+ +LD + +G PN VTY+ + G+C + N EEA+
Sbjct: 275 EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEG 334
Query: 308 FYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ I N L + +V+ ++ C+ G E A E + N ++ G
Sbjct: 335 VVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGY 394
Query: 367 AGASKVSEAKELI 379
++ EA ++
Sbjct: 395 CKLGRMVEAHNIL 407
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+ P++ TYN +I C+S + S A S+ ++ K I PNA ++ L+ K+
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ K+ Q M G+ V Y++ I+ LC EA LLD+M+ + PN VTY I
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 294 YGFCK 298
G+ +
Sbjct: 908 QGYVR 912
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F EM E K+ +V + L+ L E + +F + G+ P+L TYN ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMM 270
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + A + EM + PN +FG L+ G K ++ K L M +G+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 249 SGVSMYN-----------------------------------VRIHSLCKLRKCAEAKAL 273
+ +YN + I LC + + EA L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM KG PN+VTY+ I G+CK+GN E+A + M+ G+ PN + T++ CK
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
G E A+G E + KG +P+ +L+ G
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ ++EM L +V F L+ L + ++ I+ ++G+ P
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVP 331
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN +I +C++ + S A S+ +E+++ I P+ ++ L+ G ++ E+ + +L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M++ G YN I CK +A + +M KG++PN +T+S I G+CK
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G E A Y M GL P+ Y ++ K G+ + A KE G PN T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ GL ++S+A +L
Sbjct: 512 SCLIDGLCKDGRISDAIKL 530
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 140/313 (44%), Gaps = 11/313 (3%)
Query: 88 ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGA 147
+ FN +S+ LE K P++ II + + + E A+ + +MD + ++ A
Sbjct: 110 CSVFNVLSR-LESSKFTPNV-----FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQA 160
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N +L L + + +V+ + G P++ TY +I C D A+ + EM
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMV-ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM 219
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
K I P + L+ G E + + + + M GM + YN + CK+
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHV 279
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A L EML G+ PN VT+ I G CK A+KF M++ G+ PN VY +
Sbjct: 280 KKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-F 386
+ CK G+ AL E +P+ T L+ GL G ++ EA L+ +K+K F
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 387 TKNVDTWNEIEAG 399
N T+N + G
Sbjct: 400 LPNAVTYNTLIDG 412
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P++ T++ +I +C++ +A + EM K + P+ ++ AL+ G +K+ ++
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL-------------DEMLSKGM 282
++ + M+ G+ V + I LCK + ++A L +E+
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN V Y+ I G C DG +A KF+ M SGL P+ ++ + +
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612
Query: 343 FCKESIAKGWVPNFTTMKSLVTG------LAGASKVSEAKELIGL 381
+ + G +PN + + L G L A + SE IG+
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 14/212 (6%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A E A+ + EM L V A+ AL+ + KE R+ E + G+ P
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA-GLHP 506
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILA-------------EMDRKSIKPNASSFGALVAGF 226
++ T + +I C+ S A + E+DR PN + AL+ G
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + +K M G++ V V I + + L ++L G+ PNS
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
Y G+ + G + A + +S G+
Sbjct: 627 SVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 12/333 (3%)
Query: 76 LAFSIAINKLS-EANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVR 131
+ +S I+ L E Q LE++ +PD+ + H + + A++
Sbjct: 223 ITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL---AREQGVSEALK 279
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F + V +N L+ L E +F K +G++PD TY I
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYTVFIDGL 338
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A +L +MD K P+ S A++ G KE++ ++ +L ME G
Sbjct: 339 CKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 398
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK---DGNFEEAKKF 308
+N I C+ K +A EML +G+KP VTY+ + G CK +G +EA
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 458
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G P+ Y ++ + K G + A AKG +PN T SL++GL G
Sbjct: 459 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 518
Query: 369 ASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
KV EA EL + +V++ + T+ I + L
Sbjct: 519 LDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 9/297 (3%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ H G+ + A++ F + V +NAL+ A E
Sbjct: 118 PDVVTYNTLLHGFCKVGK---LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEA 174
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+R+ ++ + + PD+ TYN ++ C++ A ++ + K PN ++ L++
Sbjct: 175 QRI-LQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLIS 230
Query: 225 GFYKE-EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G +E + E ++L+ M G K + YN IH L + + +EA L +L +G +
Sbjct: 231 GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE 290
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P TY+ I G K+ EA + + + GL P++ Y + +CK G E AL
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
K+ KG VP+ + +++ GL +V EA+ L+ G+ + + N ++N + G
Sbjct: 351 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 34/255 (13%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ T+N I C +S A ++ M + PN ++ AL++G + D +
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + G V YN +H CK+ K EA + D + +G P+ VTY+ I GFCK
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL------------------ 341
+EA++ + M + L P+ Y ++V +CK G + A
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTL 228
Query: 342 --GFCKE-------------SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
G C+E + G P+ + +L+ GLA VSEA +L G ++++
Sbjct: 229 ISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQG 288
Query: 386 FTKNVDTWNEIEAGL 400
+ V T+N + GL
Sbjct: 289 YEPEVPTYNILIDGL 303
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+ K+MDE V + NA++ L K E + V + + G P+
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE-VLLSGMEAKGCSPNA 398
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK---EEKYEDVNKV 238
++N +I C + A + EM ++ +KP ++ LV G K E + ++ +
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 458
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M G V Y+ I L K K +A+ LL M +KG PN TY+ I G C
Sbjct: 459 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 518
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+EA + + M G P++ Y T++ +CK + AL S+ G VP
Sbjct: 519 LDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGM 578
Query: 359 MKSLVTGLAGASKVSEAKELI 379
SL+ GL ++V EA +L+
Sbjct: 579 YFSLIDGLCAVARVDEALKLL 599
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 4/271 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +++ I+ L +A L+++ + + + H I + + A
Sbjct: 327 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 386
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M+ + +FN L+ A +K+ F E K G+KP + TYN ++ C+
Sbjct: 387 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR-GVKPTVVTYNILVDGLCK 445
Query: 194 SSDSS---SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ A ++ M K P+ ++ AL+ G K K +D ++L ME G
Sbjct: 446 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 505
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I LC L K EA L M+ KG P+++TY I CK ++A +
Sbjct: 506 VYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFD 565
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+G+ P S +YF+++ +C + AL
Sbjct: 566 GSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596
>gi|242074342|ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEH---AVRTFK 134
+S+ I+KL+ A F+ + + L + KT ++ F I +YG N+ EH A+ T
Sbjct: 74 YSLMIDKLAFARRFSDVEELLSKAKTEKLRFSDEFFYRLIKMYG--NVAEHPQKAIDTLF 131
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
M + S FN +L L + Y+ V ++ P+ G+ D ++N ++K C+
Sbjct: 132 AMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRL-GVTLDTCSFNILVKGLCQC 190
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
S A S+L EM ++ +PN +++ + + + ++ + M + + + +Y
Sbjct: 191 SKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVY 250
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N+ I LC+ + +EA L M S+G PNS TY + G G F EAK MS
Sbjct: 251 NILISGLCREERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMST 310
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G+ P+ Y ++ +C + A K+ + +G+VP T L+T +
Sbjct: 311 EGVRPSFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLLTSI 362
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD-SSSA 200
+ S ++ ++ L A+ + +V+ + + KT ++ + + R+IK + ++ A
Sbjct: 68 KPSEALYSLMIDKLAFARRFSDVEELLSK-AKTEKLRFSDEFFYRLIKMYGNVAEHPQKA 126
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
L M + P+ +F ++ + +YE V+++ R G+ +N+ +
Sbjct: 127 IDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKG 186
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LC+ K EA +LL EM +G +PN TYS F++ C+ ++A + + M ++ +
Sbjct: 187 LCQCSKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAAD 246
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ VY ++ +C+ A K ++G PN T + L+ GL K EAK L+
Sbjct: 247 TVVYNILISGLCREERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLISLGKFFEAKSLV 305
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A T+ R ++++ H ++ V +N ++ +L K + V+ E GI PD+
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM-IVKGISPDV 233
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I FC A+S+L EM K+I P+ +F L+ KE K + V++ + +
Sbjct: 234 VTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSL 293
Query: 242 ---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M+ M + YN I LCK A ALL EM G++P+ +Y+ + G CK
Sbjct: 294 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 353
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G E AK+F++ + G N Y M+ +CK G + A+ + KG +PN T
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAIT 413
Query: 359 MKSLVTGLAGASKVSEAKELI------GLVKE 384
++++ L+ + +A++++ GL+KE
Sbjct: 414 FRTIICALSEKDENDKAEKILREMIARGLLKE 445
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 39/303 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q + HAV +F M + FN +L +L K Y V +F +F + GI P
Sbjct: 33 HSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNGITP 91
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA----------------------- 216
DL T + +I FC + + A+S+ A + ++ P+A
Sbjct: 92 DLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFH 151
Query: 217 ------------SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
S+G L+ G K + + V ++L+ +E + +K V MYN I+SLCK
Sbjct: 152 DQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN 211
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A + EM+ KG+ P+ VTY+ I+GFC G +EA M ++P+ +
Sbjct: 212 KLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTF 271
Query: 325 FTMVYFMCKGGD---YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++ + K G + A+ +E K +P+ T SL+ GL + A L+
Sbjct: 272 SVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331
Query: 382 VKE 384
+KE
Sbjct: 332 MKE 334
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 10/316 (3%)
Query: 96 QYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
Q E + + L++E SI++ G+ E A+ F + ++V A++A++
Sbjct: 183 QGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVS 242
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS-DSSSAYSILAEMDRKSI 212
A + +E +VF K G KP+L TYN +I A + D A I EM ++ +
Sbjct: 243 AYGRSGRCREALKVFQAMKKA-GCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGV 301
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ +F +L+A + +ED +V M+R G++ + YN I ++CK + A +
Sbjct: 302 EPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAAS 361
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
++ M K + PN VTYS I G+ K G FEEA Y M SG+ P+ Y T++
Sbjct: 362 IMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYA 421
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVD 391
K G ++ AL CK+ G + T +L+ K +A L +K E NV
Sbjct: 422 KLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVL 481
Query: 392 TWNEI-----EAGLPQ 402
T++ + +AG+ Q
Sbjct: 482 TYSALIDAYSKAGMHQ 497
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+EM + + FN+L+ + +++ +RVF E + GI+ D+ TYN +I
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRR-GIEQDIFTYNTLI 347
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK----EE-------------- 230
A C+ A SI++ M K+I PN ++ ++ G+ K EE
Sbjct: 348 DAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407
Query: 231 -----------------KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
+++D + MER G+K+ V YN I + K K +A L
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGL 467
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
D+M ++G+ PN +TYS I + K G ++A + +GL P+ +Y +++ CK
Sbjct: 468 FDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCK 527
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLV 363
G E A+ +E G PN T SL+
Sbjct: 528 CGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 557
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 115/245 (46%), Gaps = 20/245 (8%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
DR++++ I+ ++ F+ ++++ R L+ + +++I YG+ + A
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDALTACKDME-RVGLKADVVTYNALIDAYGKQGKYKDAAGL 467
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F +M L +V ++AL+ A + A +++ +F+EF K G+KPD+ Y+ +I + C
Sbjct: 468 FDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF-KRAGLKPDVVLYSSLIDSCC 526
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV------------NKVLQ 240
+ A +L EM + I+PN ++ +L+ + + + ++V NKV
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGD 586
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
K+ S N H+ A ++ EM G+KPN VT+S + +
Sbjct: 587 RSTEIICKTLTSQQNANDHT-----GVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCS 641
Query: 301 NFEEA 305
+ +EA
Sbjct: 642 SLQEA 646
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 158/335 (47%), Gaps = 12/335 (3%)
Query: 72 HLDRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMT 126
+D++++ I +N K+ E + + +E+ TRPD+ +S I+ G + +
Sbjct: 112 QMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV-----MYSTIIDGLCKDKLV 166
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + EM+ + V + L+ +A E + E I P++ TYN
Sbjct: 167 DEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMI-LKNINPNIYTYNT 225
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+ + ++LA M +K +KP+ + L+ G+ + + ++ +M + G
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN+ I+ LCK ++ EA LL EML K M P++VTYS I G CK G
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + G N Y +++ +CK + + A+ + +G PN T +L+ GL
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
++ + + L L+ + + +V T+ + +GL
Sbjct: 406 CKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGL 440
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ V ++ L+ + + ++ K++F+ +T G+ PD+ +YN +I C+
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQT-GVNPDVYSYNIIINGLCKGK 304
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++L EM K++ P+ ++ +L+ G K + + + + M G + + YN
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LCK + +A AL +M +G++PN TY+ I G CK G ++ + ++ +
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVK 424
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + Y M+ +CK G ++ AL + G +PN T + ++ L + +A
Sbjct: 425 GYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKA 484
Query: 376 KELI 379
++L+
Sbjct: 485 EKLL 488
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 9/253 (3%)
Query: 141 LRH--SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
LRH + F +L +L K Y V + + + GI PDL T + +I FC +
Sbjct: 4 LRHIPPIIEFGKILGSLVKMKHYPTVISLSKQM-EAKGIVPDLVTLSILINCFCHLGQMA 62
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYN 255
++S+L ++ + +PN L+ G + +V K L ++ G + Y
Sbjct: 63 FSFSVLGKILKLGYQPNTIILNTLMKGLCLK---GEVKKSLHFHDKVVAQGFQMDQVSYG 119
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ ++ LCK+ + A LL + + +P+ V YS I G CKD +EA Y M+
Sbjct: 120 ILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR 179
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ P+ Y T++ C G A G E I K PN T +L+ L KV E+
Sbjct: 180 GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKES 239
Query: 376 KELIGLVKEKFTK 388
K L+ ++ +K K
Sbjct: 240 KNLLAVMTKKGVK 252
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D +Y ++ C+ ++ A +L ++ +S +P+ + ++ G K++ ++
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEA 169
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ V Y I C + EA LL+EM+ K + PN TY+ I
Sbjct: 170 YDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDT 229
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G +E+K +M+ G+ P+ +Y ++ C G+ + A + G P+
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
+ ++ GL +V EA + L++E KN+
Sbjct: 290 VYSYNIIINGLCKGKRVDEA---MNLLREMLHKNM 321
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P FG ++ K + Y V + + ME G+ + ++ I+ C L + A + ++
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L ++L G +PN++ + + G C G +++ F+ + G + Y ++ +CK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 334 GGDYETAL-----------------------GFCKESI------------AKGWVPNFTT 358
G+ A+ G CK+ + A+G P+ T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+L+ G A ++ EA GL+ E KN++
Sbjct: 188 YTTLICGFCLAGQLMEA---FGLLNEMILKNIN 217
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 139/313 (44%), Gaps = 44/313 (14%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
SI+LY Q + A++ EM E+ ++ +N ++ L + +
Sbjct: 364 SIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL- 422
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
++ G PD+ TYN +I +C+ SA ++ M + + P+ ++ L+ G K
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K E+V ++ + ME G + YN+ + SLCK +K EA LL EM SKG+KP+ V+
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542
Query: 289 YSHFIYGFCKDGNFEEAKKFYR------------------------------------IM 312
+ GFCK G+ + A + +R +M
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVM 602
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
NSG P++ Y ++ CK G+ F E++ K ++P+ TT ++ L KV
Sbjct: 603 KNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKV 662
Query: 373 SEAKELIGLVKEK 385
EA +I L+ +K
Sbjct: 663 HEAVGIIHLMLQK 675
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 175/371 (47%), Gaps = 22/371 (5%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
++K +++P K LE+ +A + + KL F + + L E+ R ++
Sbjct: 13 VVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM--RENV 70
Query: 108 QN---ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
N E + ++ YG+ + AV TF+ MD + SV + NA++ L + +
Sbjct: 71 NNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQA 130
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+V++ + G++ D+ TY IK+FC+++ +A +L M NA ++ +VA
Sbjct: 131 HKVYMRM-RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVA 189
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G Y +++ ++ M + V +N +H LCK E++ LL ++L +G+ P
Sbjct: 190 GLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP 249
Query: 285 NSVTYSHFIYGFCKDGNFE---------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
N T++ F+ G C++G + EA+++ R M N G P+ Y +++ CK G
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKG 309
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK----NVD 391
+ A K+++ KG+ P+ T SL+ G K + + + K+ K ++
Sbjct: 310 MVQDANRVLKDAVFKGFKPDEFTYCSLINGFC---KDGDPDRAMAVFKDGLGKGLRPSIV 366
Query: 392 TWNEIEAGLPQ 402
+N + GL Q
Sbjct: 367 LYNTLIKGLSQ 377
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD TY +I FC+ D A ++ + K ++P+ + L+ G ++
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + YN+ I+ LCK+ ++A L+D+ ++KG P+ TY+ I G
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M + G++P+ Y T++ +CK G E + K KG PN
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
T +V L A KV+EA +L+G +K K K
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 11/284 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+HA F EM L V AFN L+ L E +R+ + K G+ P+L T+N
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR-GVCPNLFTFNI 256
Query: 187 VIKAFCE---------SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
++ C +S A L +M +P+ ++ +++ G+ K+ +D N+
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
VL+ G K Y I+ CK A A+ + L KG++P+ V Y+ I G
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ G A + M+ +G PN Y ++ +CK G A ++IAKG P+
Sbjct: 377 QQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G K+ A E++ + + T +V T+N + GL
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGL 480
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P + YN +IK + A ++ EM PN ++ ++ G K D
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ++ G + YN I CK K A +++ M S+GM P+ +TY+ + G
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G EE + ++ M G +PN Y +V +CK A+ E +KG P+
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ +L TG + A +L +++++
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 10/282 (3%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSII-LYGQANMTEHAVRTF 133
+++ IN L + + S +++ + PD+ F +++I Y + + A
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDI----FTYNTLIDGYCKQLKLDSATEMV 458
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + V +N LL L A +EV +F + G P++ TYN ++ + C+
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK-GCTPNIITYNIIVDSLCK 517
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER-YGMKSGVS 252
+ + A +L EM K +KP+ SFG L GF K + ++ + ME+ Y + +
Sbjct: 518 AKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTA 577
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ + + + A L M + G P++ TY I GFCK GN + KF
Sbjct: 578 TYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLEN 637
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
P+ + + ++ +C A+G + KG VP
Sbjct: 638 MEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
Query: 61 ICRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH----- 113
+C+ ++ SHL D +A + + +G + L+ L + ++ N +
Sbjct: 410 LCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK-LDSATEMVNRMWSQGMTP 468
Query: 114 ---AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
++ +L G +A +E + FK M+E ++ +N ++ +L AK E +
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFY 227
E K+ G+KPD+ ++ + FC+ D AY + M+++ + +++ +V+ F
Sbjct: 529 GEM-KSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS 587
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
++ K+ +M+ G Y V I CK+ + L E + K P+
Sbjct: 588 EQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLT 647
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
T+ + C EA +M G+ P +
Sbjct: 648 TFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 12/228 (5%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQY---LEELKTRPDLQNERFHAHSIILY 120
+ +TP D + ++ +N L +A + + +EE P++ S+
Sbjct: 463 SQGMTP----DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLC-- 516
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+A AV EM L+ V +F L D ++F K Y +
Sbjct: 517 -KAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHT 575
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VL 239
TYN ++ AF E + + A + + M P+ ++ ++ GF K K +L
Sbjct: 576 TATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLL 635
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ ME+ + S ++ + ++ LC K EA ++ ML KG+ P +V
Sbjct: 636 ENMEKRFIPS-LTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+M EH + + ++ I KD + EV + +YG+KP++ YN V+K
Sbjct: 246 LSQMPEHGCTPDLRMYATIIDG--ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 303
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A +LAEM ++ + +F LV F + + V ++L+ M +G V
Sbjct: 304 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 363
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I+ CK EA LL M + G KPN+++Y+ + G C+ + +A++
Sbjct: 364 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 423
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G PN + T++ FMCK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 424 MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 483
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ ++ + T N ++ + + L
Sbjct: 484 TEEALELLNVMINKGITPNTIIYSSMASAL 513
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G PD+ TY VI FC+ A +L M KPN S+ ++ G + E++ D
Sbjct: 357 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVD 416
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+++ M + G +N I+ +CK +A LL +ML G P+ ++YS I
Sbjct: 417 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVID 476
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM--------------------------- 327
G K G EEA + +M N G++PN+ +Y +M
Sbjct: 477 GLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRS 536
Query: 328 --------VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ +CK + + A+ F ++ G +PN +T L+ GLA V EA++L+
Sbjct: 537 DAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 596
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 4/270 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ E PDL R +A I + E A M + L+ +V +N +L L
Sbjct: 249 MPEHGCTPDL---RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 305
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A+ ++E + + E + D+ T+N ++ FC++ +L +M P+
Sbjct: 306 AERWEEAEDLLAEMFQEDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 364
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ ++ GF KE ++ +L+ M G K Y + + LC+ + +A+ L+ M
Sbjct: 365 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 424
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ +G PN VT++ I CK G E+A + + M +G SP+ Y T++ + K G
Sbjct: 425 IQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 484
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
E AL I KG PN S+ + L+
Sbjct: 485 EEALELLNVMINKGITPNTIIYSSMASALS 514
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 10/164 (6%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++A C SA L + K ++ + +V+ ++ ++ ++L+ + +G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEML----------SKGMKPNSVTYSHFIYGF 296
+ + YN + LC ++ + + L+ EM+ G P+ Y+ I G
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGI 268
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
CKDG+ E A M + GL PN Y T++ +C +E A
Sbjct: 269 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEA 312
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 6/193 (3%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I++ C + ++ A L D ++ A++AG+ + + V ++
Sbjct: 50 LIRSLCAAGRTADAARAL---DTAGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAAVP 103
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y + SLC A+A +LDEM +G + C+ G F A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +++ G + +S +V +C+ G + + ++ + G P+ + +++ GL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 367 AGASKVSEAKELI 379
A + + +EL+
Sbjct: 224 CMAKRWDDVEELM 236
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++I+++G Q+ + A++ F EM + K++ + F L+ L KE ++ +
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K YG++P + Y +IKA C+ + S A+ + E IK +A+ + L++ K +
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+V+ +L+ M G K YNV I+ C A +LDEM+ KG+KP+ ++Y+
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ F + +EEA + M G SP++ Y + +C+G +E A E + KG
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
+ P ++ + L + K+ ++I + + D W+
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWS 436
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 119 LYGQANMTEHAVRTFKEMD------EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
L + N A++ F+ D + R+S+ ++ ++ L +K + E+ +V +
Sbjct: 15 LLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLK 74
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
I P + VI F S A + EM + + S +L++ K +
Sbjct: 75 TDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGEL 134
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC-AEAKALLDEMLSKGMKPNSVTYSH 291
E + + L ++ +G K YN+ IH C C +A L DEM+ K +KP VT+
Sbjct: 135 EKMKERLSSIDEFG-KPDACTYNILIHG-CSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 192
Query: 292 FIYGFCKDGNFEEAKKF-YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I+G CKD +EA K + ++ G+ P +Y +++ +C+ G+ A E+
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ +L++ L A + +E ++ + EK K + T+N + G
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 14/331 (4%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
S + R+ + LS+ F GI Q + L L N H H + + +
Sbjct: 70 SSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSI---LINCFCHLHRV---------DFGL 117
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++ + L S+ F LL L + +V ++ + G++P++ TYN +I +
Sbjct: 118 SVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM-LVRGLQPNVYTYNVIINS 176
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+S ++ A L +M++ PN ++ L+ G+ + ++ V +M G
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y ++ CK+ + EA LLDE L KG+ P+ VT++ I G C+ G A++ +R
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ G +PN Y ++ +CK G+ E A +E PN L+ L
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ + KEL L+ E NV T+ + L
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 138/310 (44%), Gaps = 9/310 (2%)
Query: 78 FSIAINKLSE---ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
+++ IN LS+ AN G + +E++ P++ N L GQ + A F
Sbjct: 170 YNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ---MDEARSVFD 226
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
M +V + +L+ + +E ++ E + G+ PD+ T+ +I C +
Sbjct: 227 LMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK-GLVPDIVTFTTIISGLCRA 285
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+A + + PN ++G L+ G K E+ + Q M+R +K + +Y
Sbjct: 286 GRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIY 345
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ I SLCK K + K L ++ +G+KPN TY+ + CK+G EA K +R M
Sbjct: 346 TILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE 405
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G +P+ Y ++ + D A +E + +G+ + T ++L+ + +
Sbjct: 406 DGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLNDFP-TNDIPA 463
Query: 375 AKELIGLVKE 384
K LIG ++
Sbjct: 464 LKTLIGFCED 473
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+G+ M E + +++M E+ + ++ +N L+ L A +RVF E ++ IKP
Sbjct: 179 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 237
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +IK +C++ + A L +M+ + + + ++ ++ Y + + +
Sbjct: 238 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 297
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M+ G++ +++ I LCK K E + + M+ KG KPN Y+ I G+ K
Sbjct: 298 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 357
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A + M + G P+ Y +V +CK G E AL + G N
Sbjct: 358 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 417
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
SL+ GL A +V EA+ L + EK
Sbjct: 418 SSLIDGLGKAGRVDEAERLFEEMSEK 443
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 12/269 (4%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVF-----IEFPKTYGIKPDLDTYNRVIKAFC 192
+ K H++ + +L+ L +AKD ++ V EFP T + N +IK+F
Sbjct: 127 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMT------VSAANALIKSFG 180
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + +M I+P ++ L+ G + +V ++ME +K +
Sbjct: 181 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIV 240
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I CK + +A L +M ++G + + +TY I D +F Y+ M
Sbjct: 241 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 300
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ + ++ +CK G + I KG PN L+ G A + V
Sbjct: 301 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 360
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+A L+ ++ E F +V T++ + GL
Sbjct: 361 EDAIRLLHRMIDEGFKPDVVTYSVVVNGL 389
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD+ TY+ V+ C++ A + N+ + +L+ G K + ++
Sbjct: 374 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 433
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIY 294
++ + M G YN I + K RK EA AL M + G TY+ +
Sbjct: 434 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 493
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G K+ EEA K + +M + G++P ++ + + +C G A E G +
Sbjct: 494 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 553
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + ++ L A ++ EA +L + E+
Sbjct: 554 D-AACEDMINTLCKAGRIKEACKLADGITER 583
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 1/208 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S+ +N L + Y + N F++ I G+A + A R F
Sbjct: 378 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 437
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM E +NAL+ A T + E +F + G + TY ++ +
Sbjct: 438 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 497
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K I P A+ F AL G K K+L + G+ +
Sbjct: 498 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC 557
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ I++LCK + EA L D + +G
Sbjct: 558 EDM-INTLCKAGRIKEACKLADGITERG 584
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 152/358 (42%), Gaps = 44/358 (12%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFK 134
+++I + L A Q +E+ + PD+ + I+++G ++E A++
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVT-----YGIMVHGYCTLSELETAIKLLS 309
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM L + A+ +++ L + RV +E +G+ D + V+ FC
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRV-VEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D ++A + EM ++ + + ++ AL+ G + + ++ +VLQ ME G+ Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 255 NVRIHSLCKLRKCAEA-----------------------------------KALLDEMLS 279
V I CK+ K EA LL EM S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG++ N TY+ I G CK GN E+A + M +GL P+ Y T++ +C+ + +
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
A +E + KG P T L+ G + +V K L+ + EK N T+N +
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 9/275 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV+ F+E+ E + ++N LL AL A K+ ++F E PD+ TY
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS----PPDVVTYGI 290
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C S+ +A +L+EM + ++ N ++ +++A E + D +V++ M +G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +++ + C+ A A+ DEM +G+ + VTY+ I G C+ G +EA+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M + GL ++ Y ++ CK G A + + K PN T +L GL
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V A EL+ + + N+ T+N + GL
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 147/322 (45%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN L A + L+E++ + + + I Y + A
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + ++ +V + AL L D + E + G++ ++ TYN +I C+
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCK 507
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A + +MD +KP+ ++ ++ + ++ + + +LQ M G+K +
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV ++ C + K LL+ ML K + PN+ TY+ + +C + N + + Y+ M
Sbjct: 568 YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ + PN + Y ++ CK + + AL F E I KG+ ++ +L+ L K +
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
EA+ L + KE+ T D +N
Sbjct: 688 EARRLFEKMRKERLTAEPDVYN 709
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+RT +MDE L+ V + ++ AL +K+ + E GIKP +
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTI 565
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ FC S +L M K+I PN +++ +L+ + E+ + ++ +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + + YN+ I CK R EA EM+ KG + + +Y+ I K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
F EA++ + M L+ VY + + E+ L C E +
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+G+ M E + +++M E+ + ++ +N L+ L A +RVF E ++ IKP
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 255
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +IK +C++ + A L +M+ + + + ++ ++ Y + + +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M+ G++ +++ I LCK K E + + M+ KG KPN Y+ I G+ K
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A + M + G P+ Y +V +CK G E AL + G N
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
SL+ GL A +V EA+ L + EK
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 12/269 (4%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVF-----IEFPKTYGIKPDLDTYNRVIKAFC 192
+ K H++ + +L+ L +AKD ++ V EFP T + N +IK+F
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMT------VSAANALIKSFG 198
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + +M I+P ++ L+ G + +V ++ME +K +
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIV 258
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I CK + +A L +M ++G + + +TY I D +F Y+ M
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ + ++ +CK G + I KG PN L+ G A + V
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+A L+ ++ E F +V T++ + GL
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD+ TY+ V+ C++ A + N+ + +L+ G K + ++
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIY 294
++ + M G YN I + K RK EA AL M + G TY+ +
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G K+ EEA K + +M + G++P ++ + + +C G A E G +
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + ++ L A ++ EA +L + E+
Sbjct: 572 D-AACEDMINTLCKAGRIKEACKLADGITER 601
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 1/208 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S+ +N L + Y + N F++ I G+A + A R F
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM E +NAL+ A T + E +F + G + TY ++ +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K I P A+ F AL G K K+L + G+ +
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC 575
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ I++LCK + EA L D + +G
Sbjct: 576 EDM-INTLCKAGRIKEACKLADGITERG 602
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +FC+ + A S+ + + ++P+ SF L+ G+ K +
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PNSV+++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CKDG + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK+G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + PN+ SF L+ G K+ + + ++ + M +
Sbjct: 214 NGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF---------------- 292
+ YN I+ LCK +A+ L++EM KG+KP+ +TY+
Sbjct: 274 PDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 293 -------------------IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
I G C++G +A+K R M + GL P Y ++ CK
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD T KE G+VP+ T
Sbjct: 394 KGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 86/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ FCK+G A+ + ++ GL P+ + T++ K GD
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKLDDANEL 228
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 144/288 (50%), Gaps = 4/288 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++I++ G +A + + A F++M + +R ++ + L+ +KEV R+ E
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM- 300
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+G++PD TY ++ C+ + A + M RK IKP+ S +G ++ G+ +
Sbjct: 301 SAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGAL 360
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+++ L +M G+ ++N+ + K EA + ++M +G+ PN V Y+
Sbjct: 361 SEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATL 420
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK G ++A+ + M N G++PN V+ ++VY +C +E A E + +G
Sbjct: 421 IDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGI 480
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
PN +++ L +V +A+ LI L++ T+ ++ ++N + G
Sbjct: 481 HPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 136/320 (42%), Gaps = 40/320 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ N E A+ M + ++R ++ ++N ++ + +F++ G
Sbjct: 176 FCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQ-G 234
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P++ TY VI C++ A + +M K ++PN ++ L+ G+ ++++V
Sbjct: 235 IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVV 294
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ M +G++ Y + + LCK KC EA+ L D M+ KG+KP+ Y ++G+
Sbjct: 295 RMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGY 354
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSV--------------------------------- 323
G E F +M +G+SPN +
Sbjct: 355 ATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNV 414
Query: 324 --YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IG 380
Y T++ +CK G + A + I +G PN SLV GL K +A EL
Sbjct: 415 VNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFE 474
Query: 381 LVKEKFTKNVDTWNEIEAGL 400
+V + NV +N I L
Sbjct: 475 MVNQGIHPNVVFFNTIMCNL 494
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 3/235 (1%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL---AEM 207
LL L AK E V + G P++ +YN ++K FC+ + + A +L A+
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+S PN S+ ++ GF+ E + + + M G+ V Y + I LCK +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A+ + +M+ KG++PN VTY+ I+G+ G ++E + + MS GL P+ Y +
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ ++CK G A I KG P+ + ++ G A +SE + L+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLM 370
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN + A E +F + + G+ P++ Y +I A C+ A +M
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKM-RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + PN F +LV G +K+E ++ M G+ V +N + +LC +
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A+ L+D M G +P+ ++Y+ I G C G +EA K IM + GL PN Y T+
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKF 386
++ C+ G + A +E ++ G P T +++ GL + SEAKEL + ++
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620
Query: 387 TKNVDTWNEIEAGLPQ 402
++ T+N I GL +
Sbjct: 621 QWSIYTYNIILNGLSK 636
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + M A+ F +M + L +V + L+ AL + + F + G+ P
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE-GVAP 447
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ + ++ C A + EM + I PN F ++ E + +++
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI 507
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MER G + + YN I C + K EA LLD MLS G+KPN TY+ ++G+C+D
Sbjct: 508 DLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRD 567
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++A ++ M ++G++P Y T+++ + K + A I G + T
Sbjct: 568 GRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTY 627
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
++ GL+ + V EA ++ L + ++ T+N
Sbjct: 628 NIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFN 663
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 3/259 (1%)
Query: 118 ILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++YG + E A F EM + +V FN ++ L + +R+ I+ +
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL-IDLMERV 513
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ +YN +I+ C + A +L M +KPN ++ L+ G+ ++ + +D
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
V Q M G+ V YN +H L K R+ +EAK L M++ G + + TY+ + G
Sbjct: 574 YSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNG 633
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+ +EA K ++ + + L + + M+ + K G E A+ A G VP+
Sbjct: 634 LSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPD 693
Query: 356 FTTMKSLVTGLAGASKVSE 374
TT + + L + E
Sbjct: 694 VTTYRLIAENLIEEGSLEE 712
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 7/273 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F +M + ++ F +L+ L +++ +F E GI P++ +N ++ C
Sbjct: 437 FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ-GIHPNVVFFNTIMCNLC 495
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A ++ M+R +P+ S+ AL+ G K ++ +K+L +M G+K
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN +H C+ + +A ++ EMLS G+ P VTY+ ++G K F EAK+ Y M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
SG + Y ++ + K + AL + +K + T ++ L +
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675
Query: 373 SEAKELI------GLVKEKFTKNVDTWNEIEAG 399
+A L GLV + T + N IE G
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEG 708
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M+ R + ++NAL+ + E ++ ++ + G+KP+ TYN ++
Sbjct: 503 AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL-LDIMLSVGLKPNECTYNTLL 561
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C AYS+ EM I P ++ ++ G +K ++ + ++ M G +
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQ 621
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN+ ++ L K EA + + SK ++ + +T++ I KDG E+A
Sbjct: 622 WSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNL 681
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +S +GL P+ + Y + + + G E G E G PN + LV L
Sbjct: 682 FATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLL 741
Query: 369 ASKVSEAKELIGLVKEK 385
+S A + + EK
Sbjct: 742 RGDISRAGAYLSKIDEK 758
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 132/290 (45%), Gaps = 38/290 (13%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
++ LL A +E + + E + G++PD Y +V+ + C+S+ A +L EM
Sbjct: 85 YSTLLSGYCKAGKVEESRELLKEV-ISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
R P +F L++G +E+ E + +LQ M G+K+ V YN + LCK +
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRL 203
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ LL+ M + G P+ V YS F+YG CK G +A + M +S PN Y T+
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTI 263
Query: 328 VYFMCKGGDYETAL------------------------GFCK-----------ESIAK-G 351
+ +CK G +TAL G CK E++A+ G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
P+ T SLV GL A K+ EA E + + E N T+ + GL
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 13/258 (5%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A ++M ++ V +N L+ L A +E ++ +E K G PD+ Y+
Sbjct: 169 EMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ-LLERMKASGCAPDVVAYSS 227
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ C+S A+ +L +M PN ++ ++ G K K ++ L+MME+
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK---IDTALEMMEQMA 284
Query: 247 MKSGVSM----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G + Y+ + LCKL + EA+++++ M G +P+ VTYS + G CK G
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-----SIAKGWVPNFT 357
EEA + R M+ G PN+ Y ++V+ +C G A +E P+ +
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVS 404
Query: 358 TMKSLVTGLAGASKVSEA 375
T +L+ GL A ++ +A
Sbjct: 405 TYNALIGGLCKAGRIDDA 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ K+ E+ ++ G+K D+ TYN ++ C++ A +L M
Sbjct: 155 FNTLISGCCREKNL-EMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
P+ ++ + V G K K D ++VL+ M V YN + LCK K
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKI 273
Query: 268 AEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A ++++M S G N V YS + G CK G +EA+ M+ +G P+ Y +
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------G 380
+V +CK G E A+ +E +G PN T SLV GL +++EA+ ++ G
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393
Query: 381 LVKEKFTKNVDTWNEIEAGL 400
+V T+N + GL
Sbjct: 394 GGGHHCPPSVSTYNALIGGL 413
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
MDR PN+ +F ALV GF K+ + D ++L+ M ++ V YN + LCKL +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 267 CAEAKALLDEMLSKGMK--PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA+ L+ +M+S+G + P+ VTYS + G+CK G EE+++ + + + GL P++ +Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+V +CK AL +E I G P T +L++G + A L+ +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 385 KFTK-NVDTWNEIEAGL 400
K +V T+N + GL
Sbjct: 181 SGVKADVVTYNTLMDGL 197
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIK 189
R + M ++ +V ++N LL L + + E + + + G PD+ TY+ ++
Sbjct: 31 RLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLS 90
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+C++ + +L E+ + ++P+A + +VA K + + ++L+ M R G
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ +N I C+ + A +LL +M + G+K + VTY+ + G CK G +EA++
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M SG +P+ Y + VY +CK G A ++ PN T +++ GL +
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270
Query: 370 SKVSEAKELI 379
K+ A E++
Sbjct: 271 GKIDTALEMM 280
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 15/272 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEH 128
D + ++ ++ L +A Q LE +K PD+ A+S +YG ++
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV-----AYSSFVYGLCKSGKVLD 240
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M + +V +N +L L + + + + G ++ Y+ V+
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + A S++ M R +P+ ++ +LV G K K E+ + ++ M G K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-----MKPNSVTYSHFIYGFCKDGNFE 303
Y +H LC + AEA+ +++EM S G P+ TY+ I G CK G +
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+A KF++ M + G P+ Y T+V + + G
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FNAL+ + + +R +E I+P++ +YN +++ C+ A ++ +M
Sbjct: 13 FNALVNGFSKQGRPGDCER-LLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71
Query: 208 DRKSIK--PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+ + P+ ++ L++G+ K K E+ ++L+ + G++ MY + SLCK
Sbjct: 72 ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ EA LL+EM+ G P +T++ I G C++ N E A + M+ SG+ + Y
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T++ +CK G + A + A G P+ S V GL + KV +A +++ +++
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251
Query: 386 -FTKNVDTWNEIEAGL 400
NV T+N I GL
Sbjct: 252 HHDPNVVTYNTILDGL 267
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E++LE +A+ P D +A+S + L ++ Q LE++ R + +
Sbjct: 207 EQLLERMKASGCAP----DVVAYSSFVYGLCKSGKVLDAHQVLEQM--RDSHHDPNVVTY 260
Query: 116 SIILYG--QANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ IL G ++ + A+ ++M +V ++ ++ L +E + V +E
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSV-MEAM 319
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G +PD+ TY+ ++ C++ A + EM + KPNA ++ +LV G +
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 233 EDVNKVLQMMERYGMKS-----GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ ++++ M G VS YN I LCK + +A M S+G P+ V
Sbjct: 380 AEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 288 TYSHFIYGFCKDGNFEEAK 306
+YS + G + G +A+
Sbjct: 440 SYSTIVEGLARSGRALQAE 458
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P + YN +I +C D +L EM+ K P ++G+L+
Sbjct: 226 LIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLG 285
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+ E + + M + G+ V +YN I +LCK +A +L +M + G P+ +
Sbjct: 286 KKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDII 345
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I G C +G+ +A+ F R L+PN Y +++ C G+ A E
Sbjct: 346 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 405
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIEAGL 400
+ +G P+ T +L+ GL A KVSEA +V+EK T+ +V+ +N + +GL
Sbjct: 406 MGRGHTPDVVTFGALIHGLVVAGKVSEAL----IVREKMTERQVFPDVNIYNVLISGL 459
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 129/323 (39%), Gaps = 5/323 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ I L + +L E R N+ + I + A
Sbjct: 343 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLL 402
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM V F AL+ L +A E + E + PD++ YN +I C+
Sbjct: 403 MEMMGRGHTPDVVTFGALIHGLVVAGKVSEA-LIVREKMTERQVFPDVNIYNVLISGLCK 461
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+A +IL EM K+++P+ + L+ GF + E D K+ + ME G++ +
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 521
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
N I C+ +EA + M G P+ TY+ I G+ K GN A ++ M
Sbjct: 522 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 581
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PN Y +++ CK GD ++A G A+ PN T L+ L KV
Sbjct: 582 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVL 641
Query: 374 EAKELIGLVKEKFTKNVDTWNEI 396
A GL E N + N++
Sbjct: 642 RA----GLYFETMLLNHCSPNDV 660
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ ++ + +L+ L D +++ +F+E K G+ P++ YN VI A C+
Sbjct: 264 EMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKR-GLSPNVQIYNSVIDALCKC 322
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ A IL +M P+ +F L+ G E L+ R + Y
Sbjct: 323 WSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 382
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
IH C + A LL EM+ +G P+ VT+ I+G G EA M+
Sbjct: 383 TPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 442
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+ P+ ++Y ++ +CK A +E + K P+ +L+ G + + +
Sbjct: 443 RQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 502
Query: 375 AKELIGLVKEK 385
A+++ ++ K
Sbjct: 503 ARKIFEFMEHK 513
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ YG P++ NR++K E A + EM + + S LV G E +
Sbjct: 161 EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRV 220
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ K+++ G V YNV I C+ LL EM +KG P VTY
Sbjct: 221 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSL 280
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K G+ E+ + M GLSPN +Y +++ +CK A+ K+ A G
Sbjct: 281 INCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGC 340
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T +L+TGL V +A+ +
Sbjct: 341 DPDIITFNTLITGLCHEGHVRKAEHFL 367
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 124/310 (40%), Gaps = 18/310 (5%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+++ I+ L + + LEE+ + +E +A I + ++ A + F+ M+
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 511
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+R + + NA++ E K G PD TY VI + + +
Sbjct: 512 HKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV-GCIPDEFTYTTVISGYAKQGNL 570
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A L +M ++ KPN ++ +L+ G+ K + + M+ + V Y +
Sbjct: 571 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF-----------CKDGNFEEAK 306
I SL K K A + ML PN VT + + G C + + K
Sbjct: 631 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGK 690
Query: 307 K-----FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
F +++ + G P +S Y +++ +C+ AL F KG+VPN T S
Sbjct: 691 DALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 749
Query: 362 LVTGLAGASK 371
L+ G K
Sbjct: 750 LLYGFCSVGK 759
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 7/330 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H + +++ + L + N + L+E+ + ++ +A + + + + + A
Sbjct: 156 HPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATE 215
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
M ++NA++LAL +EV V + G++P++ TY ++ AF
Sbjct: 216 VLAAMPP-----VAASYNAIVLALCREFRMQEVFSVVSDM-VGRGLQPNVITYTTIVDAF 269
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ + A +ILA M PN +F ALV G + + + D + + M G
Sbjct: 270 CKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPST 329
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I LC + A ++L+ M G PN TYS I GF K G+ A +
Sbjct: 330 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWND 389
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS SG PN VY MV CK + A + + + PN T +L+ L +
Sbjct: 390 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR 449
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V A + + + N T+NE+ GL
Sbjct: 450 VGRALGVFHEMRRHGCVPNGRTYNELIHGL 479
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +++A C+++ +A +L EM RK P+ ++ +V+ K ++ ++
Sbjct: 154 GVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA 213
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL M + YN + +LC+ + E +++ +M+ +G++PN +TY+ +
Sbjct: 214 TEVLAAMPPVA-----ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA 268
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK G A M +G +PN + +V + G AL + +A+GW P+
Sbjct: 269 FCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 328
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAG 399
+ L+ GL + A ++ +++ NV T++ + G
Sbjct: 329 TVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 1/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I I L G S L ++ N R ++ I + +A A+ + +
Sbjct: 330 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWND 389
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + ++ + + K I+ P+ T+N +I++ C+
Sbjct: 390 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS-LIDKMLLENCPPNTVTFNTLIRSLCDCR 448
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM R PN ++ L+ G ++E D ++ M+ +G++ + YN
Sbjct: 449 RVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYN 508
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LC+ R EA + +M+ +G++PN+ T+S I+ +CK+G A M+
Sbjct: 509 TVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV 568
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
N VY ++ +C A+ + + + +G PN T LV G+
Sbjct: 569 NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ ++ M S ++N L+ L D K + + +G P++ TY+ +I
Sbjct: 313 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM-EQHGCFPNVRTYSTLI 371
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ D A SI +M R KPN + +V F K+ + ++ M
Sbjct: 372 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 431
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I SLC R+ A + EM G PN TY+ I+G ++GN +A
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 491
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + G+ + Y T+V +C+ A+ F + I +G PN T +++
Sbjct: 492 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 551
Query: 369 ASKVSEAKELIG 380
+V A ++G
Sbjct: 552 EGEVRMAAWMLG 563
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P +YN +I+ C D A SIL M++ PN ++ L+ GF K
Sbjct: 324 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 383
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M R G K V +Y + CK +AK+L+D+ML + PN+VT++ I
Sbjct: 384 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 443
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C A + M G PN Y +++ + + G+ AL E + G +
Sbjct: 444 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 503
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T ++V+GL EA +G ++ + N T++ I
Sbjct: 504 LVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 545
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 31/190 (16%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + G+ V YN+ + +LC+ + A+ +LDEM KG P+ VTY+ + CK
Sbjct: 150 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 209
Query: 302 FEEAKKF---------------------YRI---------MSNSGLSPNSSVYFTMVYFM 331
+EA + +R+ M GL PN Y T+V
Sbjct: 210 LDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAF 269
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNV 390
CK G+ A + G PN T +LV GL +V +A ++ +V E + +
Sbjct: 270 CKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPST 329
Query: 391 DTWNEIEAGL 400
++N + GL
Sbjct: 330 VSYNILIRGL 339
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
NE H L+ + N + A+ EM H + S+ +N ++ L + +E VF
Sbjct: 473 NELIHG----LFREGNCGD-ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM-VF 526
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ GI+P+ T++ +I A+C+ + A +L M+ + N + L+A
Sbjct: 527 VGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCN 586
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM---LSKG 281
++K D L M G+ +NV + + + C E + + LS+G
Sbjct: 587 QDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMNLSEG 642
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 5/268 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E F+++ + V +++ L+ LT A +E +F K G D
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 598
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN V+ FC+S AY IL EM K ++P +++GA+V G K ++ ++ + +
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ G++ V +Y+ I K+ + EA +L+EM+ KG+ PN T++ + K
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA ++ M PN+ Y ++ +C+ Y A F ++ +G VPN T +
Sbjct: 719 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++GLA +++A L E+F N
Sbjct: 779 MISGLAKVGNITDAYSLF----ERFKAN 802
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 3/284 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ YG A E A + + + E SV +FN++L L + E +F K
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-- 383
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+P+ TYN +I C AY IL EM+ S+ PN + +V K K E+
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 443
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + + G Y I L K + EA L ++ML G N V Y+ I F
Sbjct: 444 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 503
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G E+ K ++ + G P+ ++ T + + K G+ E ++ + G++P+
Sbjct: 504 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 563
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ L+ GL A + E + +K++ F + +N + G
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 607
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 8/333 (2%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
I E R+ P D ++SI I+ L++A S +K + + R + +
Sbjct: 550 IFEDIRSYGFLP----DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 605
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+ ++ A +EM E ++ +V + A++ L E +F E K+ GI
Sbjct: 606 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF-EEAKSKGI 664
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+ ++ Y+ +I F + AY IL EM +K + PN ++ +L+ K E+ +
Sbjct: 665 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 724
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
Q M+ Y++ I+ LC+++K +A +M +G+ PN VTY+ I G
Sbjct: 725 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 784
Query: 298 KDGNFEEAKK-FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K GN +A F R +N G+ P+++ + ++ M A +E+ +G N
Sbjct: 785 KVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINI 843
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+ SL+ L S+ E ++G V + K+
Sbjct: 844 KSCISLLDAL-NKSECLEQAAIVGAVLREIAKS 875
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 12/348 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
+IL+ A+L P + L +I +++L +A + E R PD +
Sbjct: 409 RILDEMEHASLFP----NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT---Y 461
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I G+ + A R F++M + + + +L+ I ++ ++F E +
Sbjct: 462 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIR 521
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G KPDL N + ++ + I ++ P+ S+ L+ G K +
Sbjct: 522 R-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + M++ G YN + CK K +A +L+EM K ++P TY +
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G K +EA + + G+ N +Y +++ K G + A +E + KG
Sbjct: 641 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 700
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
PN T SL+ L A +++EA +KE K N T++ + GL
Sbjct: 701 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 748
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P Y +I A E+ A +L +M + F LV +E + D
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ ++ ++ + +YNV I K A E+ ++G+KP+ V+Y+ I+ C
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G EA++ + M P + Y TM+ G +E A + +G +P+
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
+ S++T L KV EA L ++K+ N T+N I
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNII 394
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+A M R +P S++ L+ + + E ++L+ M+ G + GV ++ + +L +
Sbjct: 167 VAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAR 226
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ A+A AL+DE+ ++P+ V Y+ I F K GN + A KF+ + GL P+
Sbjct: 227 EGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVS 286
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +M++ +CK G A + A+ VP +++ G A + +A +L+ ++
Sbjct: 287 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 346
Query: 384 EK-FTKNVDTWNEI 396
E+ +V ++N I
Sbjct: 347 ERGCIPSVVSFNSI 360
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 108/296 (36%), Gaps = 35/296 (11%)
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
AH +A + AV M K R + A+ L+ AL A+ + + + +
Sbjct: 148 AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-Q 206
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G + + + +++A + A +++ E+ ++P+ + + F K +
Sbjct: 207 EVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 266
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
K ++ G+K Y I LCK + EA+ L +M ++ P + Y+ I
Sbjct: 267 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 326
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGL----------------------------------SP 319
G+ G FE+A K + G P
Sbjct: 327 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP 386
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
NSS Y ++ +C GG E A E PN T+ +V L A K+ EA
Sbjct: 387 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 442
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PN + L A + + +D + +M R + S Y V I +L + R+ A L
Sbjct: 143 PNQAC-AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 201
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L +M G + ++ + ++G +A + S L P+ +Y + K
Sbjct: 202 LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 261
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G+ + A F E A+G P+ + S++ L A ++ EA+EL
Sbjct: 262 AGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 7/330 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H + +++ + L + N + L+E+ + ++ +A + + + + + A
Sbjct: 160 HPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATE 219
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
M ++NA++LAL +EV V + G++P++ TY ++ AF
Sbjct: 220 VLAAMPP-----VAASYNAIVLALCREFRMQEVFSVVSDM-VGRGLQPNVITYTTIVDAF 273
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ + A +ILA M PN +F ALV G + + + D + + M G
Sbjct: 274 CKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPST 333
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I LC + A ++L+ M G PN TYS I GF K G+ A +
Sbjct: 334 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWND 393
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS SG PN VY MV CK + A + + + PN T +L+ L +
Sbjct: 394 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR 453
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V A + + + N T+NE+ GL
Sbjct: 454 VGRALGVFHEMRRHGCVPNGRTYNELIHGL 483
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 155/332 (46%), Gaps = 20/332 (6%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
A A+ +L+ A +G+ L+E++ R E ++ + +A + A++TF
Sbjct: 57 AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTF--- 113
Query: 137 DEHKLRHSVGA--------FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
++ H +G +N L+ AL V V+ K G+ P++ TYN ++
Sbjct: 114 --YRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKD-GVHPNVFTYNLLV 170
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+A C+++ +A +L EM RK P+ ++ +V+ K ++ ++ +VL M
Sbjct: 171 RALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVA-- 228
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN + +LC+ + E +++ +M+ +G++PN +TY+ + FCK G A
Sbjct: 229 ---ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 285
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M +G +PN + +V + G AL + +A+GW P+ + L+ GL
Sbjct: 286 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 345
Query: 369 ASKVSEAKELIGLVKEKFT-KNVDTWNEIEAG 399
+ A ++ +++ NV T++ + G
Sbjct: 346 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 377
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 1/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I I L G S L ++ N R ++ I + +A A+ + +
Sbjct: 334 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWND 393
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + ++ + + K I+ P+ T+N +I++ C+
Sbjct: 394 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS-LIDKMLLENCPPNTVTFNTLIRSLCDCR 452
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM R PN ++ L+ G ++E D ++ M+ +G++ + YN
Sbjct: 453 RVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYN 512
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LC+ R EA + +M+ +G++PN+ T+S I+ +CK+G A M+
Sbjct: 513 TVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV 572
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
N VY ++ +C A+ + + + +G PN T LV G+
Sbjct: 573 NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ ++ M S ++N L+ L D K + + +G P++ TY+ +I
Sbjct: 317 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM-EQHGCFPNVRTYSTLI 375
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ D A SI +M R KPN + +V F K+ + ++ M
Sbjct: 376 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 435
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I SLC R+ A + EM G PN TY+ I+G ++GN +A
Sbjct: 436 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 495
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + G+ + Y T+V +C+ A+ F + I +G PN T +++
Sbjct: 496 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 555
Query: 369 ASKVSEAKELIG 380
+V A ++G
Sbjct: 556 EGEVRMAAWMLG 567
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P +YN +I+ C D A SIL M++ PN ++ L+ GF K
Sbjct: 328 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 387
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M R G K V +Y + CK +AK+L+D+ML + PN+VT++ I
Sbjct: 388 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 447
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C A + M G PN Y +++ + + G+ AL E + G +
Sbjct: 448 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 507
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T ++V+GL EA +G ++ + N T++ I
Sbjct: 508 LVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 549
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 31/210 (14%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ +E V V M + G+ V YN+ + +LC+ + A+ +LDEM KG
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKF---------------------YRI--------- 311
P+ VTY+ + CK +EA + +R+
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSD 253
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M GL PN Y T+V CK G+ A + G PN T +LV GL +
Sbjct: 254 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 313
Query: 372 VSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
V +A ++ +V E + + ++N + GL
Sbjct: 314 VHDALDMWRWMVAEGWAPSTVSYNILIRGL 343
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
NE H L+ + N + A+ EM H + S+ +N ++ L + +E VF
Sbjct: 477 NELIHG----LFREGNCGD-ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM-VF 530
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ GI+P+ T++ +I A+C+ + A +L M+ + N + L+A
Sbjct: 531 VGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCN 590
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM---LSKG 281
++K D L M G+ +NV + + + C E + + LS+G
Sbjct: 591 QDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMNLSEG 646
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 5/263 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A+ E A + M + + V ++ L+ A A E + + G P++
Sbjct: 270 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALE-LLHGMASRGCTPNV 328
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N +I C+S S A+ I ++ + + P+ +F L+AG K +E + + +
Sbjct: 329 VTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M M+ V + I LCK + A+ +LD M + G+ PN VTY+ ++G CK G
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EE +F M +SG P S Y ++VY +C+ + AL + + GW P+ T
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 362 LVTGLAGASKVSEA----KELIG 380
LV GL + K +A +E++G
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVG 531
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A+ + A+ M +V FN+++ L + E ++ ++ + P
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM-LVP 361
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T+N +I C++ + A ++ EM K+++P+ +FGAL+ G K + E +L
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL 421
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+M G+ V YNV +H LCK + E L+EM+S G P S+TY +Y C+
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
++A + + + G P++ Y +V + K G E A+ +E + KG P+ T
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
+ GL + ++ EL+ +V K
Sbjct: 542 AACFGGLHRSGNLAGTMELLRVVLAK 567
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 153/365 (41%), Gaps = 43/365 (11%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++ IN L ++N + EEL R PD+ S+ +A E A R
Sbjct: 82 VTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLC---KAGDLEEARRL 138
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDLDTYNRVIKAF 191
M +V ++ L+ L E + + E K+ + P++ TYN +
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198
Query: 192 CESSDSSSAYSILAEMDRKSIK-----------------------------------PNA 216
C+ S ++ A ++ + S++ PN
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNV 258
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
++ ALV G K +K E + +++ M G+ V Y+V + + CK + EA LL
Sbjct: 259 VTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 318
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M S+G PN VT++ I G CK EA + + N L P+ + ++ CK G+
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNE 395
+E A +E +AK P+ T +L+ GL A +V A++++ L+ NV T+N
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 396 IEAGL 400
+ GL
Sbjct: 439 LVHGL 443
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 153/365 (41%), Gaps = 43/365 (11%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +S+ IN L + + + ++E+ + ++ L G + +MT A
Sbjct: 152 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 211
Query: 134 KEMDEHKLRHS--VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + + LR S F+ L+ L E + G P++ TYN ++
Sbjct: 212 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN---DDMIAGGYVPNVVTYNALVNGL 268
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A++++ M K + P+ ++ LV F K + ++ ++L M G V
Sbjct: 269 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 328
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR- 310
+N I LCK + EA + ++ ++ + P+ VT++ I G CK GNFE+A +
Sbjct: 329 VTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388
Query: 311 ----------------------------------IMSNSGLSPNSSVYFTMVYFMCKGGD 336
+M N G+ PN Y +V+ +CK G
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNE 395
E F +E ++ G VP T SLV L AS+ +A +L+ +K + + T+N
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 396 IEAGL 400
+ GL
Sbjct: 509 LVDGL 513
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 43/293 (14%)
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
H A N L+ T + + V ++F + YN V+++ C + +++ A
Sbjct: 7 HHTAAANLLVPITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALE 66
Query: 203 IL-AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
I EM R + P ++ ++ G K + ++ + + + G V YN I SL
Sbjct: 67 IFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSL 126
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS-------- 313
CK EA+ L M S+G PN VTYS I G CK G +EA++ + M+
Sbjct: 127 CKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 186
Query: 314 -----NSGL--------------------------SPNSSVYFTMVYFMCKGGDYETALG 342
NS L SP++ + T++ +CK G + A
Sbjct: 187 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 246
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
+ IA G+VPN T +LV GL A K+ A +I +V + T +V T++
Sbjct: 247 --DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 297
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALL-DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V+ YN+ + SLC+ + A A + EM G+ P VTY+ I G CK + +
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ G P+ Y T++ +CK GD E A ++G VPN T L+ GL
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164
Query: 370 SKVSEAKELIGLVKEK---FTKNVDTWNEIEAGL 400
++ EA+ELI + K N+ T+N GL
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 7/305 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + I+KL A F I L ++K + E + YG+A + A R +M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 137 -DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ + ++N +L L K V VF E + GI P + T+ V+KA C +
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM-LSKGISPTVYTFGVVMKALCLVN 231
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ SA ++L +M R PNA + L+ K + +V K+L+ M G V+ +N
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LCK+ + EA L+D ML +G PNS TY ++G C+ G +EA R++ N
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNK 347
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKES-IAKGWVPNFTTMKSLVTGLAGASKVSE 374
+PN ++ T++ G + A ES ++ G P+ T +L+ GL +
Sbjct: 348 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407
Query: 375 AKELI 379
A+EL+
Sbjct: 408 ARELM 412
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 139 HKLRHSVGA------FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
H+ SVG +N L+L L K Y R + + G +P++ TY +I FC
Sbjct: 377 HESMLSVGCGPDIFTYNTLILGLC-KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 435
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A ++L EM K + NA + L++ K+EK +D + M G K +
Sbjct: 436 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 495
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I LCK+ K EA L +ML +G+ N++TY+ I+ F + G +EA K M
Sbjct: 496 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G + Y ++ +C+ G+ E L ++ ++KG PN + L+ GL +
Sbjct: 556 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 615
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A E + ++ T ++ T+N + GL
Sbjct: 616 QHALEFLRDMIHRGLTPDIVTYNSLINGL 644
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I A C+ A ++ +M K KP+ +F +L+ G K K+E+ + Q M
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN IH+ + EA L+++ML +G + +TY+ I C+ GN E
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ + M + GL+PN+ ++ +C+ G+ + AL F ++ I +G P+ T SL+
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 641
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL + EA L L E + T+N +
Sbjct: 642 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 675
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 158/377 (41%), Gaps = 20/377 (5%)
Query: 36 LTSKDKTRAALTLLKSESNPEKIL------------EICRAAALTPESHL------DRLA 77
L K A LL NP +L + A A+ ES L D
Sbjct: 332 LCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 391
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++ I L + Y + + E++ + N + I + + E A EM
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
L + +N L+ AL + ++ +F + + G KPD+ T+N +I C+ +
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPDIFTFNSLIFGLCKVNKF 510
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A + +M + + N ++ L+ F + ++ K++ M G YN
Sbjct: 511 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 570
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I +LC+ + AL ++M+SKG+ PN+++ + I G C+ GN + A +F R M + GL
Sbjct: 571 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 630
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P+ Y +++ +CK G + AL + +G P+ T +L++ +A
Sbjct: 631 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 690
Query: 378 LIGL-VKEKFTKNVDTW 393
L+ V F N TW
Sbjct: 691 LLSRGVDSGFIPNEVTW 707
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 104 RPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+PD+ F +S+I + N E A+ +++M + + +N L+ A +
Sbjct: 491 KPDI----FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 546
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E ++ + G D TYN +IKA C + + ++ +M K + PN S L
Sbjct: 547 EALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 605
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G + + + L+ M G+ + YN I+ LCK + EA L D++ +G+
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 665
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
P+++TY+ I CK+G F++A +SG PN ++ +V K GD E
Sbjct: 666 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 146/339 (43%), Gaps = 10/339 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
RAAAL P R A + L + N + L+E+ + ++ +A + + +
Sbjct: 127 RAAALQPPH---RRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK 183
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ + A M ++NA++LAL +EV V + G++P++
Sbjct: 184 LDRLDEATEVLAAMPP-----VAASYNAIVLALCREFRMQEVFSVVSDM-VGRGLQPNVI 237
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY ++ AFC++ + A +ILA M PN +F ALV G + + + D + + M
Sbjct: 238 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 297
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G YN+ I LC + A ++L+ M G PN TYS I GF K G+
Sbjct: 298 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 357
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
A + MS SG PN VY MV CK + A + + + PN T +L
Sbjct: 358 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 417
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ L +V A + + + N T+NE+ GL
Sbjct: 418 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 456
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 1/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++++I I L G S L ++ N R ++ I + +A A+ + +
Sbjct: 307 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWND 366
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + ++ + + K I+ P+ T+N +I++ C+
Sbjct: 367 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS-LIDKMLLENCPPNTVTFNTLIRSLCDCR 425
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM R PN ++ L+ G ++E D ++ M+ +G++ + YN
Sbjct: 426 RVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYN 485
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LC+ R EA + +M+ +G++PN+ T+S I+ +CK+G A M+
Sbjct: 486 TVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV 545
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
N VY ++ +C A+ + + + +G PN T LV G+
Sbjct: 546 NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ ++ M S ++N L+ L D K + + +G P++ TY+ +I
Sbjct: 290 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM-EQHGCFPNVRTYSTLI 348
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ D A SI +M R KPN + +V F K+ + ++ M
Sbjct: 349 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 408
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I SLC R+ A + EM G PN TY+ I+G ++GN +A
Sbjct: 409 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 468
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + G+ + Y T+V +C+ A+ F + I +G PN T +++
Sbjct: 469 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 528
Query: 369 ASKVSEAKELIG 380
+V A ++G
Sbjct: 529 EGEVRMAAWMLG 540
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P +YN +I+ C D A SIL M++ PN ++ L+ GF K
Sbjct: 301 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 360
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M R G K V +Y + CK +AK+L+D+ML + PN+VT++ I
Sbjct: 361 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 420
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C A + M G PN Y +++ + + G+ AL E + G +
Sbjct: 421 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 480
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T ++V+GL EA +G ++ + N T++ I
Sbjct: 481 LVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 522
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
NE H L+ + N + A+ EM H + S+ +N ++ L + +E VF
Sbjct: 450 NELIHG----LFREGNCGD-ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM-VF 503
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ GI+P+ T++ +I A+C+ + A +L M+ + N + L+A
Sbjct: 504 VGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCN 563
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM---LSKG 281
++K D L M G+ +NV + + + C E + + LS+G
Sbjct: 564 QDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMNLSEG 619
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 6/294 (2%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
L + RFH+ S+ N + A+ +F M S FN LL ++ K Y V
Sbjct: 33 LSHNRFHSKSL----NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFS 88
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ + ++GI PD+ T N +I +FC + A+S+LA++ + ++P+ ++F L+ G
Sbjct: 89 LSNQM-DSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGL 147
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
E K D + M G + V Y I+ LCK+ A LL M +P+
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 207
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V Y+ I CKD EA + M G+SP+ Y ++++ +C +++ +
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 267
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
I +P+ ++V L K++EA +++ ++ NV T+N + G
Sbjct: 268 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG--IKPDLDT 183
T A+R + M++ + V + +++ +L KD ++V F F K G I PD+ T
Sbjct: 188 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSL--CKD-RQVTEAFNLFSKMVGQGISPDIFT 244
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I + C + ++L +M I P+ F +V KE K + + V+ MM
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G++ V YN + C + EA + D M+ G PN ++Y+ I G+CK +
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M L PN+ Y T+++ +C G + A+ E +A G +P+ T + L+
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424
Query: 364 TGLAGASKVSEAKELI 379
L S + EA L+
Sbjct: 425 DYLCKKSHLDEAMALL 440
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 158/364 (43%), Gaps = 20/364 (5%)
Query: 42 TRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
T AA+ LL+S C+ + S +D L +++EA FN S+ + +
Sbjct: 188 TNAAIRLLRSMEQGN-----CQPDVVVYTSIIDSLCKD---RQVTEA--FNLFSKMVGQ- 236
Query: 102 KTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
PD+ ++ +++ N+ E H +M K+ V F+ ++ AL
Sbjct: 237 GISPDI-----FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEG 291
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
E V ++ G++P++ TYN ++ C S+ A + M PN S+
Sbjct: 292 KITEAHDV-VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 350
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ G+ K ++ + + + M + + YN +H LC + + +A AL EM++
Sbjct: 351 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVA 410
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G P+ TY + CK + +EA + + S + P+ +Y ++ MC+ G+ E
Sbjct: 411 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 470
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEA 398
A +KG PN T ++ GL + EA +L + + + + T+N I
Sbjct: 471 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 530
Query: 399 GLPQ 402
GL Q
Sbjct: 531 GLLQ 534
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 143/335 (42%), Gaps = 9/335 (2%)
Query: 69 PESHLD--RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
P S +D RL SIA K + +S ++ PD+ +S + N
Sbjct: 64 PPSTVDFNRLLTSIAKTKQYPTVF--SLSNQMDSFGIPPDVYTLNILINS---FCHLNRP 118
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
A ++ + L+ F L+ L + + +F + G +P++ TY
Sbjct: 119 GFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE-GFQPNVVTYGT 177
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+ ++++A +L M++ + +P+ + +++ K+ + + + M G
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 237
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + Y IHSLC L + LL++M++ + P+ V +S + CK+G EA
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 297
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+M G+ PN Y ++ C + + A+ + G+ PN + +L+ G
Sbjct: 298 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 357
Query: 367 AGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++ +A L + +++ N T+N + GL
Sbjct: 358 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +NAL+ + + E +VF G P++ +YN +I +C+ A +
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHN-GYAPNVISYNTLINGYCKIQRMDKATYL 369
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM +K + PN ++ L+ G + +D + M +G ++ Y + + LCK
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
EA ALL + M P+ Y+ I G C+ G E A+ + +S+ GL PN
Sbjct: 430 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 489
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
Y M+ +C+ G + A E G P+ T ++ GL + A +L+ ++
Sbjct: 490 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549
Query: 383 KEKFTKNVDT 392
F+ +V T
Sbjct: 550 ARGFSADVST 559
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 2/258 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ M E AV+ F M + +V ++N L+ + + +F E + I P+
Sbjct: 325 QSEMDE-AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI-PNT 382
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C A ++ EM P+ +++ L+ K+ ++ +L+
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E M + +Y + I +C+ + A+ + + SKG++PN TY+ I G C+ G
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 502
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA K + M +G SP+ Y T+ + + + A+ +E +A+G+ + +T
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 562
Query: 362 LVTGLAGASKVSEAKELI 379
LV L K+++
Sbjct: 563 LVEMLCDDKLDQSVKQIL 580
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ K ++ + + + ++ + A + + + +F + G++P++ TY
Sbjct: 434 DEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL-SSKGLRPNVRTYTI 492
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C A + EMD P+ ++ + G + ++ ++LQ M G
Sbjct: 493 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ VS + + LC + K +L E +
Sbjct: 553 FSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 7/279 (2%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L Q + E A+ EM V FN L+L L +E R ++ T G
Sbjct: 222 LVAQGGVAEAAM-LLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAAR-LVDRMMTQGCM 279
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY +++ C + + A ++L + + N ++ G E K ++
Sbjct: 280 PSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNVVMLNTVIRGCLTEGKLARATEL 335
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+MM G V Y++ +H LCKL + A +LDEM KG PN VTYS ++ FC+
Sbjct: 336 YEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 395
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +++A+ M G S NS Y ++Y +CK G + A +E ++G P+ T
Sbjct: 396 NGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICT 455
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+++ L + EA+ + L++E N T+N +
Sbjct: 456 YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTL 494
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 146/329 (44%), Gaps = 12/329 (3%)
Query: 69 PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM 125
P+ H +SI ++ L + F + L+E++ + P++ HS + + M
Sbjct: 346 PDVH----TYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHS---FCRNGM 398
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A +M + +N ++ AL + R+ E K+ G KPD+ TYN
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM-KSQGCKPDICTYN 457
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A I + + + N ++ L+ + ++++ ++ M +
Sbjct: 458 TMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLH 517
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + V YN I +LCK + ALL+EM++KG+KPN+ +Y+ I CK G +A
Sbjct: 518 GCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDA 577
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + M N GL+P+ Y T++ +CK G AL ++ + P+ T L++
Sbjct: 578 LELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISW 637
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTW 393
+ +A L+ + N TW
Sbjct: 638 HCKVRLLDDAAMLLDKAISGGIVPNERTW 666
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E + G PD+ TY+ ++ C+ SA +L EM+ K PN ++ L+ F +
Sbjct: 337 EMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRN 396
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
++D +L M G YN I++LCK K +A L+ EM S+G KP+ TY
Sbjct: 397 GMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTY 456
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY-------------------- 329
+ IY C + EEA+ +R + G+ N Y T+++
Sbjct: 457 NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL 516
Query: 330 ---------------FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+CK G+ + ++ +E + KG PN + L+ L A KV +
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRD 576
Query: 375 AKELIG-LVKEKFTKNVDTWNEIEAGL 400
A EL ++ + T ++ T+N + GL
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGL 603
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A R +EM + + +N ++ L +E + +F + G+ + TYN
Sbjct: 435 DQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE-GVVANGITYNT 493
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I A + + +EM + + S+ L+ KE + +L+ M G
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K YN+ I+ LCK K +A L EML++G+ P+ VTY+ I G CK G A
Sbjct: 554 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 613
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ N + P+ Y ++ + CK + A ++I+ G VPN T +V
Sbjct: 614 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 9/234 (3%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+ P+ + + P +YN V+ + + A + M R + P +FG +
Sbjct: 131 QMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 190
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ D +L+ M R+G +Y IH+L AEA LLDEML G + T+
Sbjct: 191 GRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTF 250
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ + G C G EA + M G P+ Y ++ +C+ + A
Sbjct: 251 NDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM------ 304
Query: 350 KGWVP--NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
G +P N + +++ G K++ A EL ++ K +V T++ + GL
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ +R EM H + V ++N L+ AL + +E T GIKP+ +YN
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR-SMALLEEMVTKGIKPNNFSYNM 563
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A + EM + + P+ ++ L+ G K +L+ +
Sbjct: 564 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + YN+ I CK+R +A LLD+ +S G+ PN T+ + F +
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 51/383 (13%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPD 106
+L SES P E+ + L+ + H I ++S IS L L ++P
Sbjct: 37 SLASSESTPPITEEVISKSVLSSQWHF--------IEQVSPNLTPALISNVLYNLCSKPQ 88
Query: 107 LQNE---RFHAH---------SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
L ++ H H +++L + + A++ K++ + + L
Sbjct: 89 LVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQV----MGTRIATNRELFDE 144
Query: 155 LTIAKDYKEVK---------RVFIEFP------------KTYGIKPDLDTYNRVIKAFCE 193
LT+++D VK RV E K GI P ++T N ++ F +
Sbjct: 145 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 204
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A+ + AEM R I +F +V KE K + + + ME G K V
Sbjct: 205 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 264
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN IH A+ +LD M KG++P+S TY I G CK+G EEA + M
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 324
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL PN+ Y T++ C GD E A + E + KG +P+ +T LV L ++
Sbjct: 325 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 384
Query: 374 EAKELI------GLVKEKFTKNV 390
EA ++I G++ + T N+
Sbjct: 385 EADDMIKEMRKKGIIPDAITYNI 407
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 13/318 (4%)
Query: 77 AFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
F+I +N KL +A F G ++E L +P++ + H Y E A
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIG---FMEGLGFKPNVVSYNTIIHG---YSSRGNIEGAR 282
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R M + + +L+ + +E +F + + G+ P+ TYN +I
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVPNAVTYNTLIDG 341
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C D A+S EM +K I P+ S++ LV + E + + + +++ M + G+
Sbjct: 342 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 401
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I+ + +A L +EMLSKG++P VTY+ IY + +EA +
Sbjct: 402 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 461
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ + G+SP+ ++ MV C G+ E A KE K P+ T +L+ G
Sbjct: 462 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 521
Query: 371 KVSEAKELIGLVKEKFTK 388
KV EA+ L+ +K + K
Sbjct: 522 KVEEARMLLDEMKRRGIK 539
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A EM + + + +L+ L+ KE +F E G+ P
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF-EKILDQGVSP 470
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +N ++ C + + A+ +L EMDRKS+ P+ +F L+ G +E K E+ +L
Sbjct: 471 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+R G+K YN I + +A + DEMLS G P +TY+ I CK+
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
+ A++ + M N G+SP+ S Y +++ M
Sbjct: 591 QEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L+ + N E A + EM ++ +V FN ++ L K+ R FI F + G K
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKA-REFIGFMEGLGFK 259
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ +YN +I + + A IL M K I+P++ ++G+L++G
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG------------- 306
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+CK + EA L D+M+ G+ PN+VTY+ I G+C
Sbjct: 307 ----------------------MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 344
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ E A + M G+ P+ S Y +V+ + G A KE KG +P+ T
Sbjct: 345 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 404
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
L+ G S+ AK+ L E +K ++
Sbjct: 405 YNILINGY---SRCGNAKKAFDLHNEMLSKGIE 434
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A EM + + SV +N L+ AL + E + E K GI PD TYN
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK-GIIPDAITYNI 407
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + ++ A+ + EM K I+P ++ +L+ + + ++ + + + + G
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V M+N + C A LL EM K + P+ VT++ + G C++G EEA+
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M G+ P+ Y T++ + GD + A E ++ G+ P T +L+ L
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 587
Query: 367 AGASKVSEAKELIGLVKEKFTKNV 390
+ A+EL+ KE K +
Sbjct: 588 CKNQEGDLAEELL---KEMVNKGI 608
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 147/313 (46%), Gaps = 7/313 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
+ + ++ IN+L F + + ++ L N + + I L+G ++ E A+
Sbjct: 371 NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI-EKAMVV 429
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F +M + +V +N L++ + + Y F+ K +PD TY +I FC
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVE-NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ SA S EM + I PN ++ A++ G+ KE K + + + ME G + +
Sbjct: 489 KGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I L K + +EA+ +M +G++PN++TY+ I G CK+ A K + M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
PN+ Y +++Y +C+ G + A + G P T +LV+GL +
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRS 664
Query: 373 SEAKELIGLVKEK 385
+EA +L+ +KEK
Sbjct: 665 NEASQLVENMKEK 677
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+FN LLL L + V+ + + G+KP L T+N +I C+ A + +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSS-GVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ + + P+A ++ +L+ G + K + +V M + G Y+ I+ LC +
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA +L+EM KG++P TY+ I C G ++A R M G SP+ Y
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ + + G E A+G + + +G VPN T +L+ L + A ++ ++
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402
Query: 387 T-KNVDTWNEIEAGL 400
T N T+N+I GL
Sbjct: 403 TLANAQTYNQIIKGL 417
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 8/315 (2%)
Query: 90 YFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFN 149
Y N +++L +K +ER + I + + + A F EM + + + +
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYT 516
Query: 150 ALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
A++ K+ K +V E + G ++TYN +I + + S A A+M
Sbjct: 517 AMIDGY--CKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMT 574
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ ++PN ++ +L+ G K K+ ME+ Y I+ LC+ K
Sbjct: 575 EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVD 634
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A+ L + G +P TYS + G C++G EA + M GLSP+ +Y +++
Sbjct: 635 AAERLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL 690
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFT 387
CK + AL KG+ P+ K L+ L G S+ EA + L+K+++
Sbjct: 691 VAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWN 750
Query: 388 KNVDTWNEIEAGLPQ 402
++ W + GL Q
Sbjct: 751 SDLIVWTVLVDGLLQ 765
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 2/277 (0%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ +M A + ++ ++ S+ FN ++ L +E VF + + + + PD
Sbjct: 173 GKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQ-FDLCPD 231
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY +I C + A+ + M + PN+ ++ L+ G E + + +L+
Sbjct: 232 AFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLE 291
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G++ V Y V I SLC + + +A L+ M KG P+ TY+ I G + G
Sbjct: 292 EMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAG 351
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
E A Y M GL PN+ Y ++ +C G + AL G + N T
Sbjct: 352 KMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYN 411
Query: 361 SLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
++ GL G + +A + ++K+ + V T+N +
Sbjct: 412 QIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
+ + +S IN L LEE+ + P + S+ G+ + A+
Sbjct: 266 NSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV---DDAI 322
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ M + SV + A++ L A + ++ + K G+ P+ TYN +I
Sbjct: 323 NLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE-GLVPNTVTYNALINE 381
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C A I M+ NA ++ ++ G + + E V M + G
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I K A L M +P+ TY I GFCK G + A F+
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SPN Y M+ CK G + AL + G + T ++++GL+ +
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561
Query: 371 KVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ SEA++ + E+ N T+ + GL
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 37/316 (11%)
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALL----------------- 152
R H S I+ N T+ A++ F + + H +H +G F ++L
Sbjct: 70 RPHHVSKIINTHIN-TDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRI 128
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPD--------LDTYNRVIKAFCESSDSSSAYSIL 204
L + ++ E+KRV +F +GI L ++N ++ + +SA ++
Sbjct: 129 LMIKACRNEDELKRV-TDF--LHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVY 185
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
A++ +KP+ +F ++ K+ K ++ V + ++ + Y I C+
Sbjct: 186 AQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRN 245
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
RK +A + D M+ G PNSVTYS I G C +G EA M+ G+ P Y
Sbjct: 246 RKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTY 305
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG---- 380
+ +C G + A+ + KG P+ T ++++GL A K+ A IG
Sbjct: 306 TVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA---IGMYHK 362
Query: 381 LVKEKFTKNVDTWNEI 396
++KE N T+N +
Sbjct: 363 MLKEGLVPNTVTYNAL 378
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F ++ + L + +L+L + + VF K G P+ TY+
Sbjct: 213 VQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKD-GCNPNSVTYS 271
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C A +L EM K I+P ++ ++ + +D +++ M +
Sbjct: 272 TLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK 331
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V Y I L + K A + +ML +G+ PN+VTY+ I C +G F A
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIA 391
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M G N+ Y ++ + D E A+ + + G P T +L+
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451
Query: 366 LAGASKVSEAKELIGLVKE 384
++ A + ++KE
Sbjct: 452 NLKRGYLNNATRFLYMMKE 470
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ F+ M+E+ S+ +NA++ L+ + E ++ F G++P
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK-FCAKMTEQGLQP 580
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA----------------------- 216
+ TY +I C+++ ++ A+ I EM++K+ PNA
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLT 640
Query: 217 --------SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
++ LV+G +E + + +++++ M+ G+ + +Y + + CK K
Sbjct: 641 ENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVD 700
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A + + M KG +P+ Y I C EEA ++ + + + V+ +V
Sbjct: 701 CALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLV 760
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + GD + + F ++ P+ T L L+ K
Sbjct: 761 DGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 112/260 (43%), Gaps = 7/260 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKE 135
++ I+ LS+ N F+ ++ ++ T LQ S+I + T A + F E
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKM-TEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M++ + + +L+ L +R+ G +P +DTY+ ++ C
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL-----TENGCEPTIDTYSTLVSGLCREG 662
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S+ A ++ M K + P+ + +L+ K K + ++ +M G + + +Y
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
V I +LC + + EA + +L K + + ++ + G ++G+ + KF +M +
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782
Query: 316 GLSPNSSVYFTMVYFMCKGG 335
+P+ Y + + K G
Sbjct: 783 NCTPSLHTYIILARELSKVG 802
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 2/266 (0%)
Query: 114 AHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
A+S+I +G M E + ++ M E+ + S+ +N LL L + + +RV +E
Sbjct: 135 ANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERV-LEVM 193
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ I PD+ TYN +IK +C+ + A+ +M+ +++ P+ ++ L+ Y E +
Sbjct: 194 ENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDF 253
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + M+ G++ Y++ I LCK KC E A+ ++M+ KG K N Y+
Sbjct: 254 DLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTAL 313
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K GN EA + M GL P+ Y +V MCK G + A+ + + G
Sbjct: 314 IDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGV 373
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL 378
N SL+ GL A +V EA++L
Sbjct: 374 AVNAMLYSSLIDGLGKAGRVHEAEKL 399
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 4/268 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
HA+S+++ G + F++M + + +V + AL+ + + E +F E
Sbjct: 273 HAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLF-E 331
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++PD+ TY V+ C+S A L + NA + +L+ G K
Sbjct: 332 RMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAG 391
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + K+ + M + G YN I +L K K EA A M +G TY+
Sbjct: 392 RVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYT 451
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G ++ EEA K + +M + G++P ++ + + +C G A E
Sbjct: 452 IMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPM 511
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G +P T + ++ L A ++ EA +L
Sbjct: 512 GVIPE-TAFEDMLNVLCKAGRIKEACKL 538
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 4/292 (1%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ + +E K PD+ + I Y Q T+ A F++M+ + + L+
Sbjct: 189 VLEVMENGKIGPDVVT---YNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQ 245
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
A D+ ++ E + G++ Y+ VI C+ Y++ +M +K K
Sbjct: 246 ACYAEGDFDLCLSLYHEMDEN-GLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCK 304
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
N + + AL+ K + + + M++ G++ V Y V ++ +CK + EA
Sbjct: 305 VNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEY 364
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L+ G+ N++ YS I G K G EA+K + M G P+S Y ++ + K
Sbjct: 365 LEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAK 424
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G + AL F K +G T ++ GL K EA ++ ++ +K
Sbjct: 425 CGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDK 476
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EMDE+ L A++ ++ L E VF + + G K ++ Y +I +
Sbjct: 260 YHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQK-GCKVNVAIYTALIDSNA 318
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A + M ++ ++P+ ++G +V K + ++ + L+ G+
Sbjct: 319 KCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAM 378
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y+ I L K + EA+ L +EM+ KG P+S Y+ I K G +EA F++ M
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM 438
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G Y M+ + + E AL I KG P ++L GL + KV
Sbjct: 439 EDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKV 498
Query: 373 SEAKELI 379
+ A +L+
Sbjct: 499 ARACKLL 505
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 136/349 (38%), Gaps = 25/349 (7%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
LK +I+ + + ES LD I KLS N+ + + + +E L+ RPDL
Sbjct: 24 LKPSPWVHQIMSLLLDGPVDMESRLDLFCNKFLI-KLS-PNFVSFVLKSME-LQKRPDLA 80
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+ F + K H++ + + + L I D VK VF
Sbjct: 81 LKFFTWAG--------------------KQKKYTHNLQCYVSSIDVLAINGDLDNVKSVF 120
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+F + G ++ N +IK+F + M ++P+ ++ L+ G
Sbjct: 121 CKF-RGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVN 179
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E +VL++ME + V YN I C++ K +A +M + + P+ +T
Sbjct: 180 SVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKIT 239
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y I +G+F+ Y M +GL Y ++ +CK G ++ I
Sbjct: 240 YMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMI 299
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
KG N +L+ A + EA L + KE +V T+ +
Sbjct: 300 QKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVV 348
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+++L+ L A E +++F E K G PD YN +I A + + A + M
Sbjct: 380 YSSLIDGLGKAGRVHEAEKLFEEMVKK-GCPPDSYCYNALIDALAKCGKTDEALAFFKRM 438
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + ++ ++ G ++E K E+ K+ MM G+ + + LC K
Sbjct: 439 EDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKV 498
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A A LLDE+ G+ P + + + CK G +EA K + G V +
Sbjct: 499 ARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVL 557
Query: 328 VYFMCKGGDYETALGFCKESIAKGW 352
+ + K G+ + AL I G+
Sbjct: 558 INALRKAGNADLALKLMHSKIGIGY 582
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 152/358 (42%), Gaps = 44/358 (12%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFK 134
+++I + L A Q +E+ + PD+ + I+++G ++E A++
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVT-----YGIMVHGYCTLSELETAIKLLS 309
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM L + A+ +++ L + RV +E +G+ D + V+ FC
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRV-VEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D ++A + EM ++ + + ++ AL+ G + + ++ +VLQ ME G+ Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 255 NVRIHSLCKLRKCAEA-----------------------------------KALLDEMLS 279
V I CK+ K EA LL EM S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG++ N TY+ I G CK GN E+A + M +GL P+ Y T++ +C+ + +
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
A +E + KG P T L+ G + +V K L+ + EK N T+N +
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 9/275 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV+ F+E+ E + ++N LL AL A K+ ++F E PD+ TY
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS----PPDVVTYGI 290
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C S+ +A +L+EM + ++ N ++ +++A E + D +V++ M +G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +++ + C+ A A+ DEM +G+ + VTY+ I G C+ G +EA+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M + GL ++ Y ++ CK G A + + K PN T +L GL
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V A EL+ + + N+ T+N + GL
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 147/322 (45%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN L A + L+E++ + + + I Y + A
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + ++ +V + AL L D + E + G++ ++ TYN +I C+
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCK 507
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A + +MD +KP+ ++ ++ + ++ + + +LQ M G+K +
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV ++ C + K LL+ ML K + PN+ TY+ + +C + N + + Y+ M
Sbjct: 568 YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ + PN + Y ++ CK + + AL F E I KG+ ++ +L+ L K +
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
EA+ L + KE+ T D +N
Sbjct: 688 EARRLFEKMRKERLTAEPDVYN 709
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+RT +MDE L+ V + ++ AL +K+ + E GIKP +
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTI 565
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ FC S +L M K+I PN +++ +L+ + E+ + ++ +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + + YN+ I CK R EA EM+ KG + + +Y+ I K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
F EA++ + M L+ VY + + E+ L C E +
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 152/358 (42%), Gaps = 44/358 (12%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFK 134
+++I + L A Q +E+ + PD+ + I+++G ++E A++
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVT-----YGIMVHGYCTLSELETAIKLLS 309
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM L + A+ +++ L + RV +E +G+ D + V+ FC
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRV-VEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D ++A + EM ++ + + ++ AL+ G + + ++ +VLQ ME G+ Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 255 NVRIHSLCKLRKCAEA-----------------------------------KALLDEMLS 279
V I CK+ K EA LL EM S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG++ N TY+ I G CK GN E+A + M +GL P+ Y T++ +C+ + +
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
A +E + KG P T L+ G + +V K L+ + EK N T+N +
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 9/275 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV+ F+E+ E + ++N LL AL A K+ ++F E PD+ TY
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS----PPDVVTYGI 290
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C S+ +A +L+EM + ++ N ++ +++A E + D +V++ M +G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +++ + C+ A A+ DEM +G+ + VTY+ I G C+ G +EA+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M + GL ++ Y ++ CK G A + + K PN T +L GL
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V A EL+ + + N+ T+N + GL
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN L A + L+E++ + + + I Y + A
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + ++ +V + AL L D + E + G++ ++ TYN +I C+
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCK 507
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A + +MD +KP+ ++ ++ + ++ + + +LQ M G+K +
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV ++ C + K LL+ ML K + PN+ TY+ + +C + N + + Y+ M
Sbjct: 568 YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ + PN + Y ++ CK + + AL F E I KG+ ++ +L+ L K +
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
EA+ L + K++ T D +N
Sbjct: 688 EARRLFEKMRKDRLTAEPDVYN 709
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+RT +MDE L+ V + ++ AL +K+ + E GIKP +
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTI 565
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ FC S +L M K+I PN +++ +L+ + E+ + ++ +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + + YN+ I CK R EA EM+ KG + + +Y+ I K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
F EA++ + M L+ VY + + E+ L C E +
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 12/367 (3%)
Query: 45 ALTLLKSESNPEKILEICRAA-ALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L+++E + EK + + +A A +L D+ +F +++L AN F + +K
Sbjct: 19 VIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMK 78
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+ +E YG+ + ++R F +M + S A+ +LA+ + ++
Sbjct: 79 IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAY-VTVLAILVEENQL 137
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA-YSILAEMDRKSIKPNASSFGA 221
+ F + + G+ P + + N +IKA C + + A I EM ++ P++ ++G
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGT 197
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L++G + + ++ K+ M V Y I+ LC + EA ++EM KG
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKG 257
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++PN TYS + G CKDG +A + + +M G PN Y T++ +CK + A+
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN--VDTW 393
+G P+ +++G SK EA + G+ + T N V T
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 394 NEIEAGL 400
NE+ GL
Sbjct: 378 NEVVRGL 384
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F EM E +V + +L+ L +K+ E R ++E K GI+P++ TY+
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR-YVEEMKGKGIEPNVFTYSS 267
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ S A + M + +PN ++ L+ G KE+K ++ ++L M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-------HFIYGFCKD 299
+K +Y I C + K EA LDEM+ G+ PN +T++ + G C
Sbjct: 328 LKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCT- 386
Query: 300 GNF-EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
N+ A Y M + G+S ++V +CK G+++ A+ E + G +PN T
Sbjct: 387 -NYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGT 445
Query: 359 MKSLVTGLAGASKVSEAKE 377
K L+ + V EA +
Sbjct: 446 WKLLIGHTLDNTIVGEASD 464
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 12/278 (4%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDT 183
+R FKEM+ + +V +N T+ Y ++KR F+ G++P+L T
Sbjct: 2 GLRFFKEMERNGCLPNVVTYN------TMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLIT 55
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C +L EM RK P+ ++ LV G+ KE + + M
Sbjct: 56 FNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV 115
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R G+ V Y I+S+CK A D+M +G+ PN TY+ I GF + G +
Sbjct: 116 RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA + M+ SG P+ Y ++ C G E A+G ++ + KG +P+ + +++
Sbjct: 176 EAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Query: 364 TGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+G A ++ A ++ + ++ + + T++ + GL
Sbjct: 236 SGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGL 273
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F++ IN L S+ L E+ + + +E + + Y + A+ E
Sbjct: 54 ITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAE 113
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + L +V + +L+ ++ A + F + G+ P+ TY +I F +
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM-HVRGLCPNERTYTTIINGFAQQG 172
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
AY +L EM R P+ ++ AL+ G + E+ +LQ M G+ V Y+
Sbjct: 173 LLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYS 232
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + ++ A + EM+ K + P++VTYS I G C+ EA ++ M
Sbjct: 233 TIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI 292
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
L P+ Y T++ CK GD AL E I KG++P+ T L+ GL ++ EA
Sbjct: 293 KLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352
Query: 376 KELI 379
+ L+
Sbjct: 353 RRLL 356
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 143/355 (40%), Gaps = 51/355 (14%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +A N ++ +++ R NER + I + Q + + A R E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M S+ +NAL+ + +E + + G+ PD+ +Y+ +I F +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK-GVLPDVVSYSTIISGFARNQ 242
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A+ + EM KS+ P+A ++ +L+ G ++ + + + Q M + Y
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY--------------------- 294
I++ CK +A L DEM+ KG P++VTY+ I
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYD 362
Query: 295 -----------------------------GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
GFC G +EA + + M N PN ++Y
Sbjct: 363 DSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYN 422
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+++ C+ G+ A KE + +VP+ T+ +LV L E E+IG
Sbjct: 423 VIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIG 477
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ P + N ++ F +S+ + A+ + AEM R IK + +F ++ KE K
Sbjct: 148 KGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKL 207
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + + +ME G+K V YN IH C + A+ + D M +G+KP+S TY F
Sbjct: 208 KKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSF 267
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK+G EEA M GL P + Y T++ C G+ E A + + + +G
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
+P +T L+ L K+ EA +I GLV + T N+
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 147/350 (42%), Gaps = 75/350 (21%)
Query: 113 HAHS----IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
H H+ + L+ ++N TE A + EM +++ SV FN ++ L K+ K F
Sbjct: 155 HVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKE-F 213
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I + GIKP++ TYN +I +C A I M + +KP++ ++G+ ++G K
Sbjct: 214 IGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCK 273
Query: 229 EEKYEDVNKVLQMME-----------------------------------RYGMKSGVSM 253
E K E+ + +L+ M+ R G+ VS
Sbjct: 274 EGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVST 333
Query: 254 YNVRIHSL---CKLR-----------------------------KCAEAK---ALLDEML 278
YN+ IH+L CK+ +C K L DEM+
Sbjct: 334 YNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI 393
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
SKG++P VTY+ IY K G ++A + + G+ P+ ++ ++ C G+ +
Sbjct: 394 SKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMD 453
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
A KE VP+ T +L+ G KV A+ELI +K + K
Sbjct: 454 RAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK 503
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 152 LLALTIAKDYKEVKRVFIEFP---KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
LL TI ++ VF E GIK + Y+ +I+A CE A+ M
Sbjct: 90 LLKETINSGVYSIREVFNELGVARGVLGIKTYV-LYDLLIRACCELKRGDDAFECFDMMK 148
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
K + P+ + +++ F K + E + M R +KS V +N+ I+ LCK K
Sbjct: 149 GKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLK 208
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+AK + M + G+KPN VTY+ I+G+C G E A+ + +M G+ P+S Y + +
Sbjct: 209 KAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFI 268
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFT 387
MCK G E A G ++ G P T +L+ G + A + +V+E
Sbjct: 269 SGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLM 328
Query: 388 KNVDTWN 394
V T+N
Sbjct: 329 PTVSTYN 335
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 12/320 (3%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKL 141
KL EA+ G+ + ++E+ RP ++ ++ G N E A +M L
Sbjct: 276 KLEEAS---GMLEKMKEIGLRPTAV-----TYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+V +N L+ AL + E + E + G+ PD TYN +I +C + A+
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK-GLVPDSVTYNILINGYCRCGNVKKAF 386
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++ EM K I+P ++ +L+ K + + + + + + R G+ + M+N I
Sbjct: 387 TLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGH 446
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C A A+L EM + P+ VT++ + G C++G E A++ M + G+ P+
Sbjct: 447 CANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG- 380
Y T++ K GD + A E ++ G+ P T +L+ GL + A++L+
Sbjct: 507 ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKE 566
Query: 381 LVKEKFTKNVDTWNEIEAGL 400
++ + T N +T+ + G+
Sbjct: 567 MISKGITPNDNTYLSLIEGI 586
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 2/265 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M +H + + ++ + ++ + P +YG+KP++ YN V+K C
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMP-SYGLKPNVVCYNTVLKGIC 312
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L EM +K+ + +F LV F + + V ++L+ M +G V
Sbjct: 313 SADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 372
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M S G KPN+++Y+ + G C + +A++ M
Sbjct: 373 TYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM 432
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G PN + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 433 IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEI 396
EA EL+ ++ + T NV T++ +
Sbjct: 493 EEALELLNVMINKGITPNVITYSSM 517
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL-KTRPDLQNERFHA-------HSIILYGQANM 125
D ++++ + L A + + + ++E+ K L H ++ I+ G
Sbjct: 220 DIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKE 279
Query: 126 TEHAV--RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD- 182
H V M + L+ +V +N +L + A +++ + + E Y LD
Sbjct: 280 GHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEM---YQKNCPLDD 336
Query: 183 -TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N ++ FC++ +L +M P+ ++ ++ GF KE ++ +L+
Sbjct: 337 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKN 396
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G K Y + + LC + +A+ L+ M+ +G PN VT++ I CK G
Sbjct: 397 MPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGL 456
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E+A + + M +G +P+ Y T++ + K G E AL I KG PN T S
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSS 516
Query: 362 LVTGLAGASKVSEAKEL 378
+ LA ++ + ++
Sbjct: 517 MAFALAREGRIDKVIQM 533
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q + + + ++M EH V + ++ E + P + G KP
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMP-SCGCKP 404
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +Y V+K C + A +++ M ++ PN +F ++ K+ E ++L
Sbjct: 405 NTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G + Y+ I L K K EA LL+ M++KG+ PN +TYS + ++
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++ + + + ++ + ++ +Y ++ +CK + + A+ F ++ G +PN +T
Sbjct: 525 GRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTY 584
Query: 360 KSLVTGLAGASKVSEAKELI 379
+L+ GLA + EA++L+
Sbjct: 585 TALIKGLASEGLLCEAQDLL 604
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 20/277 (7%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A T AVR +D V +NA++ + +R+ P + P+
Sbjct: 65 AGRTADAVRA---LDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP----VPPNAY 117
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY V++ C + A ++L EM +S P + ++ + Y +VL+ +
Sbjct: 118 TYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEAL 177
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC---KD 299
G N+ I+++C E +L ++ G + + V+Y+ + G C +
Sbjct: 178 HAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRW 237
Query: 300 GNFEE-AKKFYRI------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
G+ EE + ++ M+ G +P+ +Y T++ +CK G +E A + G
Sbjct: 238 GDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGL 297
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
PN +++ G+ A + +A+EL+ E + KN
Sbjct: 298 KPNVVCYNTVLKGICSADRWEKAEELL---TEMYQKN 331
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 6/193 (3%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I++ C + ++ A L D + A+VAG+ + + E ++ +
Sbjct: 58 LIRSLCVAGRTADAVRAL---DAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP--- 111
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y + LC + A+A A+LDEM S+ P Y I C+ G + A
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + G + ++ ++ +C G + L ++ G + + +++ GL
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231
Query: 367 AGASKVSEAKELI 379
A + + +EL+
Sbjct: 232 CAAKRWGDVEELM 244
>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
Length = 553
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 9/221 (4%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY--KEEKYEDV 235
+PD + V A +S +A ++L M + P+A++ LV G Y + +++
Sbjct: 99 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLV-GVYACRLRRFDAA 157
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V++ M G+ V Y+ I LC + AEA +LD ML +G +PN+ TY+ ++
Sbjct: 158 YEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHA 217
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C G EAK+ M SG +P+++ Y +V +CK G +E +ES AKGW P+
Sbjct: 218 YCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPD 277
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T S + GL A ++ ++ L+ GL + T N+
Sbjct: 278 VITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNI 318
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY+ +I C + + A +L M + +PNA ++ +V + + +
Sbjct: 168 GVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEA 227
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L M G + YNV + +LCK+ E ALL+E +KG P+ +TYS ++ G
Sbjct: 228 KRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDG 287
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G +++ M ++GL P+ ++ +C+ A + S GW N
Sbjct: 288 LCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDAN 347
Query: 356 FTTMKSLVTGLAGASK-VSEAKELIGLVKEKFTKNVDTWNEI 396
+++ L + +S K + K+ N T+N +
Sbjct: 348 VVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIV 389
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 2/223 (0%)
Query: 176 GIKPDLDTYNRVIKAF-CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G+ PD ++ + C +AY ++ M + P+ ++ L++G + +
Sbjct: 132 GVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAE 191
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
VL +M G + Y +H+ C + EAK LL+ M++ G P++ TY+ +
Sbjct: 192 ALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVE 251
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
CK G FEE + G +P+ Y + + +CK G + + + ++ G P
Sbjct: 252 ALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQP 311
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEI 396
+ T+ L+ G+ +S AK L+ E + NV +N +
Sbjct: 312 SEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTV 354
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ TY ++ A+C A +L M P+ +++ LV K +E+V
Sbjct: 203 GCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEV 262
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L+ G V Y+ + LCK + ++ AL+D+MLS G++P+ VT + + G
Sbjct: 263 DALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDG 322
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ AK+ + G N Y T++ +C + + + + KG PN
Sbjct: 323 VCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPN 382
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
T +V L ++ +A L L ++F V T+N +
Sbjct: 383 SWTFNIVVHSLCKLGRLHKA--LFLLRSKEFVATVITYNTL 421
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 134/359 (37%), Gaps = 42/359 (11%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ L A G+ + E +P+ H+ Y A
Sbjct: 172 DVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHA---YCTGGRIHEAK 228
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R M S +N L+ AL ++EV +E G PD+ TY+ +
Sbjct: 229 RLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVD-ALLEESTAKGWTPDVITYSSYMDG 287
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C++ +++++ +M ++P+ + L+ G + ++L+ G +
Sbjct: 288 LCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDAN 347
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA----- 305
V YN + LC + L +M KG+ PNS T++ ++ CK G +A
Sbjct: 348 VVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLLR 407
Query: 306 -KKFYRI--------------------------MSNSGLSPNSSVYFTMVYFMCKGGDYE 338
K+F M G++PN Y ++ +C+ +
Sbjct: 408 SKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFL 467
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEI 396
AL +S+ + P + S++ GL + + LIG V + F V + E+
Sbjct: 468 VALCCFYQSLEDDFFP--SAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQEL 524
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ ++MDE ++ V ++ ++ +L +F E +T GIK L TYN
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSLVTYN 244
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ C++ + +L +M + I PN +F L+ F KE K ++ N++ + M
Sbjct: 245 SLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN + C + +EA +LD M+ P+ VT++ I G+CK +E
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEG 364
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K +R +S GL N+ Y +V C+ G E A +E ++ G +P+ T L+ G
Sbjct: 365 MKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L K+ +A E+ L K K ++ + I G+
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 3/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRT 132
D +S I+ L + +E++T+ +++ +S++ +A V+
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSLVTYNSLVGGLCKAGKWNDGVQL 262
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M K+ +V FN L+ +E ++ E T GI P+ TYN ++ +C
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI-TKGISPNTITYNSLMDGYC 321
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A ++L M R + P+ +F +L+ G+ K ++ ++ K+ + + + G+ +
Sbjct: 322 MQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV 381
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + C+ K A+ L EM+S G+ P+ +TY + G C +G E+A + + +
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S ++ + +Y ++ MCKGG E A KG PN T +++GL +
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 501
Query: 373 SEAKELIGLVKE 384
SEA L+ ++E
Sbjct: 502 SEANILLRKMEE 513
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ L + E V + G +P++ TYN ++ C+S D+S A +L +
Sbjct: 137 TFNTLINGLCLESKVSEAV-VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRK 195
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
MD +++K + ++ ++ ++ + + + ME G+KS + YN + LCK K
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+ LL +M S+ + PN +T++ I F K+G +EA + Y+ M G+SPN+ Y +
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
++ C A + P+ T SL+ G +V E +L + K
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375
Query: 386 FTKNVDTWNEIEAGLPQ 402
N T++ + G Q
Sbjct: 376 LVANTVTYSILVQGFCQ 392
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+N +I C S S A ++A M +PN ++ ++V G K
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M+ +K+ V Y+ I SLC+ A +L EM +KG+K + VTY+ + G
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + + + M++ + PN + ++ K G + A KE I KG PN
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T SL+ G +++SEA ++ L V+ + ++ T+ + G
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKG 354
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 8/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDT 183
+ A+ F+EM + S+ F+ + K + V ++F K GI ++ T
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLV----LDFCKKMELNGIAHNIYT 102
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I FC + AYS+L ++ + +P+ ++F L+ G E K + ++ M
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN ++ +CK + A LL +M + +K + TYS I C+DG +
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A ++ M G+ + Y ++V +CK G + + K+ ++ +PN T L+
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
K+ EA EL ++ + + N T+N + G
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDG 319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 1/250 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N A M + + F +L+ K E ++F + K G+
Sbjct: 320 YCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK-RGLVA 378
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TY+ +++ FC+S A + EM + P+ ++G L+ G K E ++
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ +++ M + MY + I +CK K +A L + KG+KPN +TY+ I G CK
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ EA R M G PN Y T++ + GD + +E + G+ + +++
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 558
Query: 360 KSLVTGLAGA 369
K ++ L+ A
Sbjct: 559 KMVIDMLSSA 568
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A + EM R P+ F +G +++ V + ME G+ + N+ I+
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
C+ K A ++L +++ G +P++ T++ I G C + EA M +G P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N Y ++V +CK GD AL ++ + + T +++ L + A I
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA---I 225
Query: 380 GLVKEKFTKNVD----TWNEIEAGL 400
L KE TK + T+N + GL
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGL 250
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 51/383 (13%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPD 106
+L SES P E+ + L+ + H I ++S IS L L ++P
Sbjct: 59 SLASSESTPPITEEVISKSVLSSQWHF--------IEQVSPNLTPALISNVLYNLCSKPQ 110
Query: 107 LQNE---RFHAH---------SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
L ++ H H +++L + + A++ K++ + + L
Sbjct: 111 LVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQV----MGTRIATNRELFDE 166
Query: 155 LTIAKDYKEVK---------RVFIEFP------------KTYGIKPDLDTYNRVIKAFCE 193
LT+++D VK RV E K GI P ++T N ++ F +
Sbjct: 167 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 226
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A+ + AEM R I +F +V KE K + + + ME G K V
Sbjct: 227 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 286
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN IH A+ +LD M KG++P+S TY I G CK+G EEA + M
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 346
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL PN+ Y T++ C GD E A + E + KG +P+ +T LV L ++
Sbjct: 347 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 406
Query: 374 EAKELI------GLVKEKFTKNV 390
EA ++I G++ + T N+
Sbjct: 407 EADDMIKEMRKKGIIPDAITYNI 429
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 13/317 (4%)
Query: 78 FSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
F+I +N KL +A F G ++E L +P++ + H Y E A R
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIG---FMEGLGFKPNVVSYNTIIHG---YSSRGNIEGARR 305
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
M + + +L+ + +E +F + + G+ P+ TYN +I +
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVPNAVTYNTLIDGY 364
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C D A+S EM +K I P+ S++ LV + E + + + +++ M + G+
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I+ + +A L +EMLSKG++P VTY+ IY + +EA +
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + G+SP+ ++ MV C G+ E A KE K P+ T +L+ G K
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544
Query: 372 VSEAKELIGLVKEKFTK 388
V EA+ L+ +K + K
Sbjct: 545 VEEARMLLDEMKRRGIK 561
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A EM + + + +L+ L+ KE +F E G+ P
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF-EKILDQGVSP 492
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +N ++ C + + A+ +L EMDRKS+ P+ +F L+ G +E K E+ +L
Sbjct: 493 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+R G+K YN I + +A + DEMLS G P +TY+ I CK+
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
+ A++ + M N G+SP+ S Y +++ M
Sbjct: 613 QEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L+ + N E A + EM ++ +V FN ++ L K+ R FI F + G K
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKA-REFIGFMEGLGFK 281
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ +YN +I + + A IL M K I+P++ ++G+L++G
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG------------- 328
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+CK + EA L D+M+ G+ PN+VTY+ I G+C
Sbjct: 329 ----------------------MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 366
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ E A + M G+ P+ S Y +V+ + G A KE KG +P+ T
Sbjct: 367 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 426
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
L+ G S+ AK+ L E +K ++
Sbjct: 427 YNILINGY---SRCGNAKKAFDLHNEMLSKGIE 456
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A EM + + SV +N L+ AL + E + E K GI PD TYN
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK-GIIPDAITYNI 429
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + ++ A+ + EM K I+P ++ +L+ + + ++ + + + + G
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V M+N + C A LL EM K + P+ VT++ + G C++G EEA+
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M G+ P+ Y T++ + GD + A E ++ G+ P T +L+ L
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 609
Query: 367 AGASKVSEAKELIGLVKEKFTKNV 390
+ A+EL+ KE K +
Sbjct: 610 CKNQEGDLAEELL---KEMVNKGI 630
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 10/294 (3%)
Query: 113 HAHS--IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
HA++ ++ Y +A + HA R F M + + ALL L A +E VF
Sbjct: 108 HAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAG 167
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G PD Y ++ C + + A ++L++ + +PN + AL+ G+
Sbjct: 168 M-QADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVG 226
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E V + M+ G V Y I CK RK A L M+ G+ PN VTY+
Sbjct: 227 DLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYT 286
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG---GDYETALGFCKES 347
I G C DG + A + + M NSGL PN ++ +CK G+ + LG
Sbjct: 287 ALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLG---SL 343
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
I KG N SL+ GL A + + A L+ LV + F + T++ + GL
Sbjct: 344 IQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H ++ +++G A T A + +V +NAL+ D + VF E
Sbjct: 178 HVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF-E 236
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G P++ TY +I FC+S A + + M + PN ++ AL+ G +
Sbjct: 237 RMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDG 296
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + ++LQ ME G+ +V I +LCK + EA+ LL ++ KG+K N + Y+
Sbjct: 297 QLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYT 356
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK G F A + + + + G P++ Y +++ +C+ + A+ + + K
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416
Query: 351 GWVPNFTTMKSLV------TGLAGASKVSEAKELIGLVKEKFTKNV 390
G P+ T ++ G G+ K+ + G+ + FT +
Sbjct: 417 GVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ L+ A +A D KR + G PD Y + +C + + A + M
Sbjct: 75 YTTLINAYCLAGDLPASKRHLSSLLRA-GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ A ++ AL+ G + V M+ G +Y +H LC +
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ LL + +++G +PN V Y+ I G+C G+ E A + M +G SPN Y +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG------LAGASKVSEAKELIGL 381
+ CK + A+ + G VPN T +L+ G L A ++ ++ E GL
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313
Query: 382 VKEKFTKNV 390
V ++T +V
Sbjct: 314 VPNEWTCSV 322
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
N R + I + ++ + A+ F M + L +V + AL+ + +
Sbjct: 246 NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQG-QCSDGQLDCAYRL 304
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
++ + G+ P+ T + +I A C+ A +L + +K IK N + +L+ G K
Sbjct: 305 LQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCK 364
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
++ ++++Q + G Y+ I LC+ ++ +EA +LD+M+ KG++P+ VT
Sbjct: 365 AGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVT 424
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I ++ + +KK M +G+ P+ Y V C G E A +
Sbjct: 425 YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV 484
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEA 375
G PN T +L+ G A S+A
Sbjct: 485 DHGVCPNLVTYNALICGYANLGLTSQA 511
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 6/254 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
NA L+AL + +++ P +L TY +I A+C + D ++ L+
Sbjct: 43 CLNAFLMALARHRMLADMESFASRMPAR-----NLRTYTTLINAYCLAGDLPASKRHLSS 97
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ R P++ ++ + V G+ + ++ +M G Y +H LC
Sbjct: 98 LLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGM 157
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA ++ M + G P+ Y+ ++G C G EA+ G PN VY
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNA 217
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEK 385
++ C GD E A+ + G PN T L++G + K+ A L +V
Sbjct: 218 LIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAG 277
Query: 386 FTKNVDTWNEIEAG 399
NV T+ + G
Sbjct: 278 LVPNVVTYTALIQG 291
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G+ P+L TYN +I + +S A+S M KPN S+ L+ K+E +
Sbjct: 486 HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNN 545
Query: 235 V----------------NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ + +L+ M + + S + +YN + SLC++ + EAK LL EM
Sbjct: 546 IPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQ 605
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
S + P+ Y+ I C+ EA F M SG P Y ++ +C+ G +
Sbjct: 606 SANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQ 665
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
TA + ++K + + L+ GL V+E L+ +++EK
Sbjct: 666 TAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEK 712
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIK + Y +I C++ ++A ++ + + P+A ++ +L+ G ++++ +
Sbjct: 347 GIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEA 406
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VL M G++ Y + I L + +K +LD+M++ G+KP+ TY+ F+
Sbjct: 407 MLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRS 466
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C +G E+A+ M + G+ PN Y ++ G A K +A G PN
Sbjct: 467 YCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPN 526
Query: 356 ---FTTMKSLVTGLAGAS----------KVSEAKELIGLVKE----KFTKNVDTWN 394
+T + L+ ++ K++E K L GL++E + +D +N
Sbjct: 527 EESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 85/221 (38%), Gaps = 17/221 (7%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD--------------YKEVK 165
Y +T A TFK M + + + ++ +LL L I K+ E+K
Sbjct: 502 YANLGLTSQAFSTFKHMVANGCKPNEESYT-VLLRLLIKKESSNNIPANSVSIWKIAEMK 560
Query: 166 RV--FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ +E + ++D YN + + C A +L EM ++ P+ + +++
Sbjct: 561 YLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSII 620
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
A + + + + M + G + Y I SLC+ AK + +MLSK
Sbjct: 621 ACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYN 680
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ + I G + G E +M P+ ++Y
Sbjct: 681 YEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 109/201 (54%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KPD+ TY+ VI A C+ + +A ++L EM +K+I PN ++ +L+ G K ++E V
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M + V +++ I LCK K +A ++ M+ KG++P+ +TYS + G+C
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G + A++ + ++ + G+ PN Y ++ CK + A+ E KG P+
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
T +++ GL ++ +AK++
Sbjct: 380 TYSTILHGLIEVGRIGDAKKI 400
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
TE + + M++ + V ++ ++ AL + + E K I P++ TYN
Sbjct: 184 TEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM-KQKNIPPNIFTYN 242
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+ ++L+EM +I PN +F L+ G KE K ED ++V++ M
Sbjct: 243 SLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ + Y+ + C + A+ + + + KG+KPN +YS I G+CK N +A
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + +S GL P++ Y T+++ + + G A E + G P+ +L+ G
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFG 422
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V EA L L + + N+ + + GL
Sbjct: 423 YFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 11/303 (3%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYF---NGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
+ P H FSI I+ L + + + +++ E PD+ L GQ
Sbjct: 269 INPNVH----TFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQV 324
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A R F + + ++ ++ +++ L+ K+ + ++F E + G+KPD T
Sbjct: 325 ---DRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK-GLKPDTVT 380
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y+ ++ E A I EM R P+ L+ G++K E+ + +E
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R + +S Y V I+ LCK + EA A+ +++ S G+ P+ TY+ I GFC++G F+
Sbjct: 441 RNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD 500
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
E K R M ++G N+ Y ++ + + F KE +G+ + TT L+
Sbjct: 501 EVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560
Query: 364 TGL 366
L
Sbjct: 561 NVL 563
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 37/303 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ + + AV F M K SV F+ L + K Y V +F E + GI
Sbjct: 39 EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREM-RILGIPISD 97
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV------ 235
N V ++C A+S+L + I N +F L+ G + E K D
Sbjct: 98 SILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKK 157
Query: 236 ---------NKV---------------------LQMMERYGMKSGVSMYNVRIHSLCKLR 265
N+V L++ME+ K V Y++ I +LCK
Sbjct: 158 LVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
A LL+EM K + PN TY+ I G CK G +E+ K M N ++PN +
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
++ +CK G E A + I KG P+ T +++ G +V A+ + ++++K
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337
Query: 386 FTK 388
K
Sbjct: 338 GIK 340
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 12/332 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE-HAVRT 132
D +SI I+ L + + L E+K + ++ F +S+I G + + V+T
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQK-NIPPNIFTYNSLI-DGLCKLGQWEKVKT 259
Query: 133 F-KEMDEHKLRHSVGAFNALLLALTI---AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
EM + +V F+ L+ L +D EV R IE G++PD+ TY+ ++
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIE----KGVEPDIITYSAIM 315
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C A + + K IKPN S+ L+ G+ K++ ++ + + G+K
Sbjct: 316 DGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLK 375
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y+ +H L ++ + +AK + DEML G P+ +S ++G+ K G EEA
Sbjct: 376 PDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLL 435
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + + N S Y ++ +CK A ++ + G +P+ T ++TG
Sbjct: 436 FSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCR 495
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
E K ++ +++ N T+N I G
Sbjct: 496 EGLFDEVKGILRKMEDNGCPANNITYNVIMQG 527
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V FN LL L + +F + + +P+ Y V+ + + S+
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSL 190
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L M++ + KP+ ++ ++ K+ + +L M++ + + YN I LCK
Sbjct: 191 LRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCK 250
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
L + + K LL EM++ + PN T+S I G CK+G E+A + R M G+ P+
Sbjct: 251 LGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIIT 310
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y ++ C G + A KG PN + L+ G +++A +L G +
Sbjct: 311 YSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEIS 370
Query: 384 EKFTK-NVDTWNEIEAGL 400
+K K + T++ I GL
Sbjct: 371 QKGLKPDTVTYSTILHGL 388
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 86/245 (35%), Gaps = 37/245 (15%)
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
E S A S+ M R P+ F L + Y V + + M G+ S
Sbjct: 39 EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGM------------------------------ 282
+ N+ +S C + A ++L L G+
Sbjct: 99 ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158
Query: 283 ------KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+PN V Y + G K G+ E+ RIM P+ Y ++ +CK +
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNE 395
+ A+ E K PN T SL+ GL + + K L+ +V NV T++
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278
Query: 396 IEAGL 400
+ GL
Sbjct: 279 LIDGL 283
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+RF I YG A + + +++ FK M E + SV FN+LL + K++F
Sbjct: 164 GDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF 223
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E TYG+ PD T+N +I+ FC +S + EM R P+ ++ LV G +
Sbjct: 224 DEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCR 283
Query: 229 EEKYEDVNKVLQMMERYG--MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + + V++ M + + V Y I C + AEA +LL EM+S+G+KPN
Sbjct: 284 AGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNK 343
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I G C+ ++ K+ ++ + G P++ T++ C G E A +
Sbjct: 344 ITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFE 403
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ P+ T LV L A+E + EK
Sbjct: 404 KMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEK 443
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 11/287 (3%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF-PKTYGIKPDLD 182
+M + FKEM K V +N L+ L A K V K+ + P++
Sbjct: 250 SMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVV 309
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-M 241
TY +I+ +C D + A S+LAEM + +KPN ++ L+ G + +K + + ++L+ M
Sbjct: 310 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ G N I + C + K EA ++ ++M ++P+S TYS + C+ G+
Sbjct: 370 VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 429
Query: 302 FEEAKKFYR-------IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
F A++F+ ++ + G P + Y M ++C G + A ++ + +G
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQ 488
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
+ + K+L+ G +L+ L ++ F + +T+ + GL
Sbjct: 489 DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGL 535
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 30/216 (13%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD TY+ ++++ C+ D A E+ K I
Sbjct: 410 VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEI------------------------ 445
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ G K V+ YN LC K +A+ + +++ +G + + +Y I G
Sbjct: 446 ----LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 500
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C++G E +M P++ Y M+ + K GD A ++ + +P
Sbjct: 501 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 560
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVD 391
S++ L E+ L+ L+ E + +N+D
Sbjct: 561 AIFHSILAALVEKGCAHESASLVKLMLERRIRQNID 596
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 144/307 (46%), Gaps = 4/307 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++FS I S + + Y ++KT + + + I Y + M A+
Sbjct: 324 DLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIR 383
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M E V A+N +L L K + +F E + G+ PD T+ +I C+
Sbjct: 384 DKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVER-GVVPDFCTFTTLIHGHCK 442
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVS 252
+ A S+ M +K+IKP+ ++ L+ GF K + E N++ +M+ R + +S
Sbjct: 443 EGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHIS 502
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + ++ C L +EA L DEM+ KG+KP VT + I G+C+ G+ +A +F M
Sbjct: 503 -YAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ P+S Y T++ KG + A + KG P+ T ++ G ++
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621
Query: 373 SEAKELI 379
EA ELI
Sbjct: 622 QEA-ELI 627
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 166/374 (44%), Gaps = 45/374 (12%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
+++ +D L F + I +A N + + L+ + L + +A + +L G M
Sbjct: 106 SMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVS--INACNSLLGGLVKM 163
Query: 126 --TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK--EVKRVFIEFPKTYGIKPDL 181
+ A + E+ + +V N ++ AL KD+K +VK I+ + GI D+
Sbjct: 164 GWVDLAWEVYNEIARSGIELNVYTLNIMVNAL--CKDHKIDDVKPFLIDMEQK-GIFADI 220
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I A+C A+ ++ M K +KP ++ A++ G K+ +Y V
Sbjct: 221 VTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ + YN + C+ EAK + +ML +G+ P+ +++S I ++G+
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGH 340
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL-------------------- 341
++A ++R M SGL P++ +Y ++ C+ G AL
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400
Query: 342 ---GFCK------------ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
G CK E + +G VP+F T +L+ G + +A L G++ +K
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460
Query: 387 TK-NVDTWNEIEAG 399
K ++ T+N + G
Sbjct: 461 IKPDIVTYNILIDG 474
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 36/342 (10%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
L+ +I +N L + + + + +L +++ + + + I Y + + A
Sbjct: 182 ELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFE 241
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
M L+ ++ +NA++ L Y K VF E + G+ PD TYN ++
Sbjct: 242 VMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM-LSIGLSPDTTTYNTLLVES 300
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVA--------------------------- 224
C +++ A I ++M + + P+ SF +L+
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360
Query: 225 --------GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
G+ + + ++ M G V YN ++ LCK + A+A AL DE
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ +G+ P+ T++ I+G CK+GN +A + IM+ + P+ Y ++ CK +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E A E I++ PN + LV G VSEA L
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 14/303 (4%)
Query: 59 LEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAH 115
LEI R L LD +A++ +N L + + +E+ R PD F
Sbjct: 380 LEI-RDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD-----FCTF 433
Query: 116 SIILYG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ +++G + NM + A+ F M + ++ + +N L+ + ++ ++ E
Sbjct: 434 TTLIHGHCKEGNMGK-ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMI 492
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ I P+ +Y ++ +C S A+ + EM RK IKP + ++ G+ +
Sbjct: 493 -SRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDL 551
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ L M G+ YN I+ K +A L+++M +KG++P+ VTY+
Sbjct: 552 SKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVI 611
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ GFC+ G +EA+ R M G+ P+ S Y T++ + + A F E + +G+
Sbjct: 612 LNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGF 671
Query: 353 VPN 355
VP+
Sbjct: 672 VPD 674
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIKP L T N VIK +C S D S A L +M + + P++ ++ L+ GF K E +
Sbjct: 530 GIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKA 589
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ ME G++ V YNV ++ C+ + EA+ +L +M+ +G+ P+ TY+ I G
Sbjct: 590 FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ N +EA +F+ M G P+
Sbjct: 650 YVSQDNLKEAFRFHDEMLQRGFVPDDD 676
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ YN ++ C+ + A ++ EM + + P+ +F L+ G KE
Sbjct: 390 GCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKA 449
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +M + +K + YN+ I CK + +A L +EM+S+ + PN ++Y+ + G
Sbjct: 450 LSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C G EA + + M G+ P T++ C+ GD A F + I++G P+
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD 569
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T +L+ G + +A LI ++ K +V T+N I G
Sbjct: 570 SITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNG 614
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
KT G+ PD Y +I +C + S A I +M + + ++ ++ G K++
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
D N + M G+ + IH CK +A +L M K +KP+ VTY+
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFCK E+A + + M + + PN Y +V C G A E I KG
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
P T +++ G + +S+A E +G ++ E + T+N + G
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLING 579
>gi|356555104|ref|XP_003545878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Glycine max]
Length = 395
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 164/363 (45%), Gaps = 24/363 (6%)
Query: 10 NLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTP 69
+L+ FS +R A + L D LT K+ T TLL S ++P L
Sbjct: 25 SLSQFSTTPNRDTAILARLKHKDW--LTPKEAT----TLLTSLTHPSSTLTFFHLYTSRK 78
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH------AHSIILYGQA 123
+ H + I+KL++A+ N I + L R ++ F+ AHS + +
Sbjct: 79 DFHPSEPLCTTLISKLAQAHQLNPILTLHQTLTKRRRFSDDFFYTLIKAYAHS---FQRV 135
Query: 124 NMTEHAVRTFKEMDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+M A++T +M+ L H S FN +L L + Y + +F+ P G+ PD
Sbjct: 136 DM---ALQTLHDMN--SLFHCSPSTRTFNFVLNVLVNTRLYAAARELFLHAPP-LGVSPD 189
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
T N VIK C + +A+ +L E + NA ++ L+ G ++ + E+ +L+
Sbjct: 190 ACTLNIVIKGLCARGEMDAAFGVLEEFHELGCEANARTYATLMKGLCEKGRVEEAFGLLE 249
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME G+++ V++YNV I L K+ + E +L+ M+ +G+ PN TY+ + G + G
Sbjct: 250 KMEEEGVETDVAVYNVLIGGLRKVGRVDEGWRVLEGMVGRGVCPNEGTYNEVLCGLVEKG 309
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EE K M N G P+ Y +V C+ G + KG+VP +
Sbjct: 310 RVEEGKGVVERMGNKGFVPSFGAYKDLVKGFCEKGLVGEVEWVVWDMAWKGFVPKMGMWR 369
Query: 361 SLV 363
+V
Sbjct: 370 RIV 372
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+RF I YG A + + +++ FK M E + SV FN+LL + K++F
Sbjct: 164 GDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF 223
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E TYG+ PD T+N +I+ FC +S + EM R P+ ++ LV G +
Sbjct: 224 DEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCR 283
Query: 229 EEKYEDVNKVLQMMERYG--MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + + V++ M + + V Y I C + AEA +LL EM+S+G+KPN
Sbjct: 284 AGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNK 343
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I G C+ ++ K+ ++ + G P++ T++ C G E A +
Sbjct: 344 ITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFE 403
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ P+ T LV L A+E + EK
Sbjct: 404 KMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEK 443
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 124/318 (38%), Gaps = 22/318 (6%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR----PDL--QNERFHAHSIILYGQANMTE 127
+++ ++ I L EA + I + LE + PD N AH + E
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTM-----GKLE 396
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK------TYGIKPDL 181
A F++M E +++ ++ L+ +L D++ + F E + G KP +
Sbjct: 397 EAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLV 456
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN + + C + + A + ++ ++ + + S+ L+ G +E E +L +
Sbjct: 457 AAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVL 515
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R Y + I L K A L++ML P + + + + G
Sbjct: 516 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGC 575
Query: 302 FEEAKKFYRIMSNSGLSPN----SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
E+ ++M + N + +V F+C+ A S+ K +
Sbjct: 576 AHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDID 635
Query: 358 TMKSLVTGLAGASKVSEA 375
++++GL A KVSEA
Sbjct: 636 MCSTVISGLCKAHKVSEA 653
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 30/216 (13%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD TY+ ++++ C+ D A E+ K I
Sbjct: 410 VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEI------------------------ 445
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ G K V+ YN LC K +A+ + +++ +G + + +Y I G
Sbjct: 446 ----LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 500
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C++G E +M P++ Y M+ + K GD A ++ + +P
Sbjct: 501 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 560
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVD 391
S++ L E+ L+ L+ E + +N+D
Sbjct: 561 AIFHSILAALVEKGCAHESASLVKLMLERRIRQNID 596
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 105/282 (37%), Gaps = 54/282 (19%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK- 140
+ KL EA + + + EL+ +PD S+ G E F E+ E +
Sbjct: 392 MGKLEEAF---SVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEF---FDELAEKEI 445
Query: 141 LRHSVG------AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
L H VG A+N + L K+ +RVF + K P +Y +I C
Sbjct: 446 LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP--SYKTLILGHCRE 503
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE------------------------- 229
+ + +L M R+ P+A ++G ++ G K+
Sbjct: 504 GTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIF 563
Query: 230 --------EK---YEDVNKVLQMMERYGMKS-GVSMYNVR--IHSLCKLRKCAEAKALLD 275
EK +E + V M+ER ++ +S + + + LC+ RK EA+ +L
Sbjct: 564 HSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLL 623
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
L K + S I G CK EA Y + G+
Sbjct: 624 FSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 665
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 43/303 (14%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F EM ++ +V FN L+ + A+D V ++ E G+KPD+ TY +I
Sbjct: 205 ARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEM-SDVGVKPDVYTYGALI 262
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K FC + +A + EM + PNA F L+ KE + Q M G+
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN ++ LC+ R A+++++EM + G+KP+ VTY+ I G CKDG +
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A++ R M + L P+++ Y ++ C+
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
GD +T KE KG P T ++ GL ++ A L IG+ + T
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDIT 502
Query: 388 KNV 390
N+
Sbjct: 503 YNI 505
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+++M + + A+NAL+ L A++ K + + E K G+KPD TY +I C
Sbjct: 313 YQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM-KNAGLKPDKVTYTTLIDGCC 371
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A I +M K + + ++ AL++G K + D +VL+ M ++ +
Sbjct: 372 KDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNT 431
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + I + C+ LL EM +KG KP VTY+ + G CK G + A M
Sbjct: 432 TYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAM 491
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
N G+SP+ Y ++ CK G + ES +KG VP+F SL++ LA
Sbjct: 492 LNIGVSPDDITYNILLDGQCKHGKVANSEEL--ES-SKGMVPDFAVYTSLISELA 543
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 139/308 (45%), Gaps = 11/308 (3%)
Query: 76 LAFSIAINKLSEA---NYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAV 130
+ F+ I+ + A + +G+ + + ++ +PD+ + + ++ G + E+AV
Sbjct: 221 VTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDV-----YTYGALIKGFCRTGRMENAV 275
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F EM + + + F L+ A + ++ + + G+ PDL YN ++
Sbjct: 276 KMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDM-RVRGVMPDLVAYNALVNG 334
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + + +A SI+ EM +KP+ ++ L+ G K+ K + + Q M +
Sbjct: 335 LCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLD 394
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L K + +A+ +L EM+ ++P++ TY+ I FC+ G+ + K +
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G P Y ++ +CK G + A + G P+ T L+ G
Sbjct: 455 EMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514
Query: 371 KVSEAKEL 378
KV+ ++EL
Sbjct: 515 KVANSEEL 522
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 239 LQMMERYGMKSGVSMYNV----------------------------------RIHSLCKL 264
LQ+++ GM ++NV I +C+
Sbjct: 175 LQLLD-AGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRA 233
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
R L EM G+KP+ TY I GFC+ G E A K + M ++G++PN+ V+
Sbjct: 234 RDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVF 293
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI----- 379
T++ CK G+ + ++ +G +P+ +LV GL A + A+ ++
Sbjct: 294 TTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKN 353
Query: 380 -GLVKEKFT 387
GL +K T
Sbjct: 354 AGLKPDKVT 362
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ +L EA ++L GM P + ++ + F + G A+K + M S + P
Sbjct: 161 MSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPT 219
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ T++ MC+ D + G KE G P+ T +L+ G ++ A ++
Sbjct: 220 VVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 39/353 (11%)
Query: 53 SNPEKILEICRAAALTPESHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDL 107
++ +++ + C A AL H ++S I KL+ + F + L L+ R
Sbjct: 54 TDVKEVKDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIR 113
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
NE I YG+A++ E + F +M ++ +FN LL L + + +
Sbjct: 114 CNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEI 173
Query: 168 F-----IEF-PKTY----------------------------GIKPDLDTYNRVIKAFCE 193
F ++F P + G++P + TYN + C
Sbjct: 174 FQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCR 233
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A + M K PNA ++ L+ G+ KY++ K++ ME +G K
Sbjct: 234 KGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVN 293
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y V + L K E ++LL+EM + +KP+ VTY+ + CK+G +A K M
Sbjct: 294 YGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQ 353
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G PN++ Y M+ C GD++ A+ + G P+ T SLV GL
Sbjct: 354 VGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGL 406
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G K +Y+ +I S + +IL + ++I+ N + F AL+ + K E
Sbjct: 76 GFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKG 135
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + + +NV +++L + ++A + + +PNSV+Y+ I G
Sbjct: 136 IELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKG 195
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K G +E+A + M G+ P+ Y + + +C+ G+ +TAL K KG PN
Sbjct: 196 WIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPN 255
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G K EAK+L+
Sbjct: 256 AVTYALLMEGWCFIGKYKEAKKLM 279
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++S IN + + + +E++K + N + I L + A F
Sbjct: 703 DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF 762
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + L+ D + + F E + I PD+ TY +I FC+
Sbjct: 763 SEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQ 821
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D A + EM + ++P+ +F L+ G+ K +D +V M + G V
Sbjct: 822 IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I LCK A LL EM G++PN TY+ + G CK GN EEA K
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+GL+ ++ Y T++ CK G+ + A E + KG P T L+ G +
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 374 EAKELIG-LVKEKFTKNVDTWN 394
+ ++L+ ++ + N T+N
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFN 1023
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 140/280 (50%), Gaps = 7/280 (2%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR---VFIEFPKTYGIKPDL 181
M A + F++M + L SV + N L L+ KD + VF EFP+ G+ ++
Sbjct: 613 MLPEARKVFEKMLNYGLVLSVDSCNVYLARLS--KDCNKTATAIIVFREFPEV-GVCWNV 669
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+YN VI C+ + A+ +L M+ K P+ S+ ++ G+ + + + V K+++
Sbjct: 670 ASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEK 729
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M++ G+K Y I LC++ K AEA+ EM+ +G+ P+++ Y+ + GFCK G+
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A KF+ M + ++P+ Y ++ C+ GD A E + +G P+ T
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ G A + +A + +++ + NV T+ + GL
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRT 132
D + ++ ++ + S++ E+ +R D+ + +II + Q A +
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM L + F L+ A K+ RV + G P++ TY +I C
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLC 890
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ D SA +L EM + ++PN ++ ++V G K E+ K++ E G+ +
Sbjct: 891 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + + CK + +A+ +L EML KG++P VT++ + GFC G E+ +K M
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G++PN++ + +V C + + A K+ ++G P+ T ++LV G A +
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 373 SEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
EA L +K K F+ +V T++ + G
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
N T A+ F+E E + +V ++N ++ + E + + + G PD+
Sbjct: 646 DCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLL-LMELKGYTPDV 704
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y+ VI +C + + ++ +M +K +KPN+ ++G+++ + K + +
Sbjct: 705 ISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSE 764
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ +Y + CK A EM S+ + P+ +TY+ I GFC+ G+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA K + M GL P+ + ++ CK G + A I G PN T +
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ GL + A EL+ + K N+ T+N I GL
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 924
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A R M + +V + L+ L D + E K G++P
Sbjct: 854 YCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQP 912
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C+S + A ++ E + + + ++ L+ + K + + ++L
Sbjct: 913 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G++ + +NV ++ C + + LL+ ML+KG+ PN+ T++ + +C
Sbjct: 973 TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIR 1032
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N + A Y+ M + G+ P+ Y +V C + + A +E KG+ + +T
Sbjct: 1033 NNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTY 1092
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ G K EA+E+
Sbjct: 1093 SVLIKGFFKRKKFVEAREI 1111
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 5/251 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVRTF 133
+ ++ I+ L + + ++ L E+ + LQ F +SI+ L N+ E AV+
Sbjct: 880 VTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNI-EEAVKLV 937
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E + L + L+ A + + + + + E G++P + T+N ++ FC
Sbjct: 938 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGK-GLQPTIVTFNVLMNGFCL 996
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+L M K I PNA++F LV + + + + M G++
Sbjct: 997 HGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + C R EA L EM KG + TYS I GF K F EA++ + M
Sbjct: 1057 YENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116
Query: 314 NSGLSPNSSVY 324
GL+ + ++
Sbjct: 1117 RDGLAADKEIF 1127
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A EM L+ ++ FN L+ + ++ +++ + + GI P
Sbjct: 959 YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL-LNWMLAKGIAP 1017
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T+N ++K +C ++ +A +I +M + ++P+ ++ LV G ++ +
Sbjct: 1018 NATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLF 1077
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
Q M+ G VS Y+V I K +K EA+ + D+M G+ + + F
Sbjct: 1078 QEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFF 1130
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 12/367 (3%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L+++E + EK + + +A + D+ +F + +L AN F + +K
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMK 78
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+ +E YG+ + ++R F +M + S A+ +LA+ + ++
Sbjct: 79 IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAY-VTVLAILVEENQL 137
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA-YSILAEMDRKSIKPNASSFGA 221
+ F + + G+ P + + N +IKA C + + A I EM ++ P++ ++G
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L++G + + ++ K+ M V Y I+ LC + EA L+EM SKG
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++PN TYS + G CKDG +A + + +M G PN Y T++ +CK + A+
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN--VDTW 393
+G P+ +++G SK EA + G+ + T N V T
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 394 NEIEAGL 400
NE+ GL
Sbjct: 378 NEVVRGL 384
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F EM E +V + +L+ L +K+ E R ++E K+ GI+P++ TY+
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR-YLEEMKSKGIEPNVFTYSS 267
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ S A + M + +PN ++ L+ G KE+K ++ ++L M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-------HFIYGFCKD 299
+K +Y I C + K EA LDEM+ G+ PN +T++ + G C
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-- 385
Query: 300 GNF-EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
N+ A Y M + G+S ++V +CK G+++ A+ E + G +P+ T
Sbjct: 386 ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 359 MKSLVTGLAGASKVSEAKE 377
K L+ + V EA +
Sbjct: 446 WKLLIGHTLDKTIVGEASD 464
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 138/313 (44%), Gaps = 19/313 (6%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMT 126
H + L F++ I + + + E+ R PD + +S +++G +
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPD-----NYTYSTLMHGLCKEERI 221
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ AV EM ++ AFN L+ AL + + K V +F++ G P+
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLK-----GCVPNEV 276
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN ++ C A S+L +M PN +FG L+ GF + + D +VL +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E G + +Y+ I LCK K +A L EM+ KG PN++ YS I G C++G
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA+ F M N G PNS Y +++ + GD A+ KE + N L
Sbjct: 397 DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSIL 456
Query: 363 VTGLAGASKVSEA 375
+ GL K EA
Sbjct: 457 INGLCKDGKFMEA 469
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 39/379 (10%)
Query: 60 EICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL 119
EI ++ L L+F I + + F + + L ++K + E+
Sbjct: 46 EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105
Query: 120 YGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYG 176
YG+A++ E AV F M E + + +V +FN++L + + + + K+
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P+ T+N VIKA C A + E+ ++ P+ ++ L+ G KEE+ ++
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAV 225
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L M+ G + +NV I +LCK A L+D M KG PN VTY+ ++G
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSS---------------------------------- 322
C G E+A M ++ PN
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345
Query: 323 -VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
VY +++ +CK G + A+ KE + KG PN +L+ GL K+ EA+ +
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSE 405
Query: 382 VKEK-FTKNVDTWNEIEAG 399
+K K + N T++ + G
Sbjct: 406 MKNKGYLPNSFTYSSLMRG 424
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
++ L L+ R NE ++ I + A+ +KEM + ++AL+
Sbjct: 330 TRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDG 389
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
L E R F+ K G P+ TY+ +++ + E+ DS A + EM +
Sbjct: 390 LCREGKLDEA-RGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIH 448
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N + L+ G K+ K+ + V + M G+K V Y+ IH C + L
Sbjct: 449 NEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLF 508
Query: 275 DEMLSKG--MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
++ML +G ++P+ +TY+ + FC + A IM + G P+
Sbjct: 509 NQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPD 556
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 9/238 (3%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P + YN +I +C D +L EM+ K P ++G+L+
Sbjct: 983 LIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLG 1042
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+ E + + M + G V +YN I +LC R +A +L +M + G P+ +
Sbjct: 1043 KKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDII 1102
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ + G C +G+ +A+ F R L+PN Y +++ C G+ A E
Sbjct: 1103 TFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1162
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIEAGL 400
+ +G P+ T +L+ GL A KVSEA +V+EK T+ +V+ +N + +GL
Sbjct: 1163 MGRGHTPDVVTFGALIHGLVVAGKVSEAL----IVREKMTERQVFPDVNIYNVLISGL 1216
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 2/269 (0%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
IN L + I E++ R N + + I A+ K+M
Sbjct: 1038 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1097
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ FN L+ L ++ + F+ + P+ +Y +I FC + A
Sbjct: 1098 DPDIITFNTLMTGLCHEGHVRKAEH-FLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1156
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM + P+ +FGAL+ G K + V + M + V++YNV I L
Sbjct: 1157 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1216
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK R AK +L+EML K ++P+ Y+ I GF + N +A+K + M + G+ P+
Sbjct: 1217 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDI 1276
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAK 350
M+ C+ G A+ C ++ K
Sbjct: 1277 VSCNAMIKGYCQFGMMSEAI-LCMSNMRK 1304
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ ++ + +L+ L D +++ +F+E K G P++ YN VI A C
Sbjct: 1021 EMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR-GFSPNVQIYNSVIDALCNC 1079
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ A IL +M P+ +F L+ G E L+ R + Y
Sbjct: 1080 RSATQAMVILKQMFASGCDPDIITFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1139
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
IH C + A LL EM+ +G P+ VT+ I+G G EA M+
Sbjct: 1140 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1199
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+ P+ ++Y ++ +CK A +E + K P+ +L+ G + + +
Sbjct: 1200 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 1259
Query: 375 AKELIGLVKEK 385
A+++ ++ K
Sbjct: 1260 ARKIFEFMEHK 1270
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ YG ++ N ++K E + EM K + S LV G E +
Sbjct: 918 EQYGSLLEVTHCNHLLKLLVEQRRWDDGRKLYDEMLGKDSGADNYSTCVLVRGLCLERRV 977
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ K+++ G V YNV I C+ LL EM +KG P VTY
Sbjct: 978 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSL 1037
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K G+ E+ + M G SPN +Y +++ +C A+ K+ A G
Sbjct: 1038 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1097
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T +L+TGL V +A+ +
Sbjct: 1098 DPDIITFNTLMTGLCHEGHVRKAEHFL 1124
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 156/358 (43%), Gaps = 35/358 (9%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + I+KL A F I + L ++K + E + YG+A + A R +M
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165
Query: 137 -DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ S ++N +L L + VF + + G+ P+ T+ V+KA C +
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDM-LSKGVSPNDYTFGLVMKALCMVN 224
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A +L +M + PN+ + L+ K ++ ++ K+L+ M G V+ +N
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK----------------- 298
I+ C+L + E L+D M+ KG PN +TY + ++G CK
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP 344
Query: 299 --------------DGNFEEAKKF-YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
+G EA F Y M N+G P+ + T+V +CK G + +AL
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ AKG PN T L+ G ++ EA ++ ++ + F+ N +N + + L
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISAL 462
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ T++ ++ C+ SA ++ +MD K KPN +++ L+ GF K+ + E+
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G YN I +LCK K EA + EM SKG KP+ T++ I+G
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFG 496
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY-------------------------- 329
C+ E+A YR M G+ NS + T+++
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556
Query: 330 ---------FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI- 379
+CK G E LG +E I KG P+ T L+ G A KV A E +
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMR 616
Query: 380 GLVKEKFTKNVDTWNEIEAGL 400
++ F+ ++ T+N + GL
Sbjct: 617 DMIHRGFSPDIVTYNSLINGL 637
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 4/323 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D FS +N L + F + + ++ + N + I + + E A
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + +NAL+ AL E +F E + G KPD+ T+N +I C
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM-SSKGCKPDIFTFNSLIFGLCR 499
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++ +M + + N+ +F L+ F + + ++ K++ M G
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEIT 559
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I +LCK + L +EM+ KG+ P+ +T + I GFC G A +F R M
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G SP+ Y +++ +CK G + AL ++ A+G P+ T +L+ L
Sbjct: 620 HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFD 679
Query: 374 EAKELI--GLVKEKFTKNVDTWN 394
+A L+ G V+ F N TWN
Sbjct: 680 DACFLLYRG-VENGFVPNDVTWN 701
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 15/325 (4%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
F + + L N + L ++ + N + I + + + A++ +EM
Sbjct: 213 FGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF 272
Query: 138 EHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
V FN ++ + + K V R+ ++ G P+ TY ++ C+
Sbjct: 273 LMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILK-----GFTPNDMTYGYLMHGLCK 327
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMMERYGMKSGVS 252
+ A ++L+ K PN F LV GF + + + V M G V
Sbjct: 328 TCRIDEAQALLS----KVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVF 383
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
++ ++ LCK A L+++M +KG KPN TY+ I GFCK G EEA R M
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G S N+ Y ++ +CK G AL E +KG P+ T SL+ GL ++
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEI 396
+A L +V E N T+N +
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTL 528
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P + T N +I FC + +A + +M + P+ ++ +L+ G K + ++
Sbjct: 587 GLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEA 646
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + ++ G++ YN I LC+ +A LL + G PN VT++ +Y
Sbjct: 647 LNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYN 706
Query: 296 FCKDGNFE 303
F K N E
Sbjct: 707 FGKQSNSE 714
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R +P+S + +S IN +A F + L+E++ R + + + I
Sbjct: 159 RCGLCSPDS----ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCD 214
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ A+ +++M + SV + L+ AL + + + + + G P++
Sbjct: 215 NGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVV 272
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I FC+ + A + +M S P+ ++ L+ G+ K+E+ +D K+LQ M
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+YG + YN + SL K K +A L ML + KP+ T++ I FCK G
Sbjct: 333 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 392
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ A + +++M++ G P+ Y M+ C+ + A + G P+ T S+
Sbjct: 393 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 452
Query: 363 VTGLAGASKVSEAKELIGLVK 383
V+GL AS+V EA E+ +++
Sbjct: 453 VSGLCKASQVDEAYEVYEVLR 473
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 3/305 (0%)
Query: 98 LEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
L ++ R D + F + +I ++ + + A F+ M + + +N ++
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 422
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
A + +++ +E G PD+ TYN ++ C++S AY + + +
Sbjct: 423 RANRIDDARQL-LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
+ L+ G K + +D K+L+ MER G V Y + IH CK + ++ A E
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
ML KG P +TYS I CK + + M G++P++ VY +++ +CK
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNE 395
Y+ A K G P T LV L S++ EA L+ +++ + + T+N
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661
Query: 396 IEAGL 400
+ G
Sbjct: 662 VFDGF 666
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 8/292 (2%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
Q + + PD+ + ++I++ G +AN + A + + M E V +N+++
Sbjct: 400 QLMTDRGCLPDI-----YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 454
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L A E V+ E + G D+ T + +I C+S A +L EM+R
Sbjct: 455 GLCKASQVDEAYEVY-EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA 513
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ ++ L+ GF K ++ + M G V Y++ I LCK + + L
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L ML +G+ P+++ Y+ I G CK +++EA + Y++M +G +P Y +V +CK
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ A+ + + G +P+ T S+ G +++ +A L +K +
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 5/283 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIK 178
+ +A + A R EM++ + +N ++ L D V + +
Sbjct: 177 FCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLC---DNGRVDSALVHYRDMQRNCA 233
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY ++ A C+S+ S A IL +M PN ++ L+ GF K ++ +
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M V YN+ I CK + + LL EM+ G +PN +TY+ + K
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G + +A ++M P+ + M+ CK G + A + +G +P+ T
Sbjct: 354 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 413
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+++G A+++ +A++L+ + E +V T+N I +GL
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + +EM ++ + +N L+ +L + Y + + + KP
Sbjct: 316 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL-AQMMLRRDCKP 374
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
T+N +I FC+ AY + M + P+ ++ +++G + + +D ++L
Sbjct: 375 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 434
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G V YN + LCK + EA + + + + G + VT S I G CK
Sbjct: 435 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 494
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
++A+K R M +G +P+ Y +++ CK + +L F E + KG VP T
Sbjct: 495 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++ L +++V + L+ + E+ T + + + GL
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGL 596
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 1/198 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + +EM+ + V A+ L+ A + F E G P + TY+
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK-GCVPTVITYSI 556
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
VI C+S+ +L M + + P+A + +++ G K + Y++ ++ ++M++ G
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V YNV + LCK+ + EA LL+ M S G P++VTY+ GF K ++A
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 307 KFYRIMSNSGLSPNSSVY 324
+ ++ M + G SP +Y
Sbjct: 677 RLFQAMKSRGCSPTPFMY 694
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 34/240 (14%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T N ++ AF + AY + P++ ++ L+ GF K ++ ++L M
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193
Query: 243 ERYGMKSGVSMYNVRIHSLCK--------------LRKCA-------------------- 268
E+ G+ ++YN I LC R CA
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARIS 253
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A +L++M+ G PN VTY+ I GFCK GN +EA + M + SP+ Y ++
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
CK + +E + G PNF T +L+ L + K +A L ++ + K
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 373
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 14/334 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYG--QANMTEH 128
D ++I I+ AN + Q LE E PD+ ++ I+ G +A+ +
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT-----YNSIVSGLCKASQVDE 464
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A ++ + V + L+ L ++ + +++ E + G PD+ Y +I
Sbjct: 465 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERN-GSAPDVVAYTILI 523
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ + + +EM K P ++ ++ K + D +L+ M G+
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y I LCK EA L M G P VTY+ + CK +EA
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHL 643
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M + G P++ Y ++ K +++ A + ++G P L+T L
Sbjct: 644 LEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVA 703
Query: 369 ASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
K+ +A E+ +E D EI L Q
Sbjct: 704 EEKMDQAMEIW---EEALEAGADVDPEISRTLQQ 734
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 230 EKYEDVNKVLQMME----RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
++ +D++K ++ + + G K N + + + +K EA L P+
Sbjct: 107 QQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPD 166
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
S+TYS I GFCK +F++A + M G+ P+++VY T++ +C G ++AL +
Sbjct: 167 SITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYR 226
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ + + P+ T LV L ++++S+A ++ +++ NV T+N + G
Sbjct: 227 D-MQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 281
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 12/305 (3%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L +L PD+ H + L +H V ++ R V F L+ L
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCL-------DHRVSEALDLFHQICRPDVLTFTTLMNGL-- 192
Query: 158 AKDYKEVKRV-FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPN 215
++ + V+ V ++ G++PD TY + C+ D+ SA ++L +M+ S IKPN
Sbjct: 193 CREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ A++ G K+ ++ D + + M+ G+ + YN I C + + A+ LL
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EML + + PN VTY+ I F K+G F EA + Y M G+ PN+ Y +M+ CK
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ A KG P+ T +L+ G GA ++ + EL+ + + N T+N
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432
Query: 395 EIEAG 399
+ G
Sbjct: 433 TLIHG 437
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E ++ +V ++A++ L + + +FIE + GI P++ TY
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-QDKGIFPNIVTY 291
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S+A +L EM + I PN ++ AL+ F KE K+ + ++ M
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ YN I CK + A+ + M +KG P+ T++ I G+C ++
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M GL N+ Y T+++ C GD AL ++ I+ G P+ T +L+
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Query: 365 GLAGASKVSEAKEL 378
GL K+ +A E+
Sbjct: 472 GLCDNGKLKDALEM 485
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV FN L+ A+ + V ++ + + I+ D+ ++
Sbjct: 63 EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ-IRCDIYSFTI 121
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G + + V++ L + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR---VSEALDLFHQI- 177
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P+ +TY F+ G CK G+ A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + + E KG PN T ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S A+ L+ +++ K + NV T+N +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + ++ +N ++ I+ + +R+ E + I P++ TYN +I AF
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK-ISPNVVTYNALINAFV 334
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + EM + I PN ++ +++ GF K+++ + + +M G V
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I C ++ + LL EM +G+ N+VTY+ I+GFC G+ A + M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------------GWVPNFTTMK 360
+SG+ P+ T++ +C G + AL K ++ K G P+ T
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 361 SLVTGLAGASKVSEAKEL 378
L+ GL K EA+EL
Sbjct: 514 ILICGLINEGKFLEAEEL 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 12/271 (4%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM L + +N L+ + D + + + G+ P
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCP 461
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T N ++ C++ A + M + ++P+ ++ L+ G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + M SK PN VT
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ ++ +Y T++Y K G+ AL +E I
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G P+ T+++++TG ++ A ++
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D L ++I I L F + EE+ R + + ++ I + + + A + F
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M +V FN L+ A + +F E + GI D Y +I F +
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR-GIVADAIIYITLIYGFRK 626
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ + A I EM + P+ + ++ GF+ +E+ E +L+ ++RY ++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLED 682
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 3/262 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y M + A + F EM E + V +N L+ L K + E ++ + K G+ P
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV-GLSP 331
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKV 238
++ TYN +I FC+ +A + ++ + P ++ L+AG+ K E ++ V
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+M ER +S V+ Y + I + +L +A + M G+ P+ TYS I+G C
Sbjct: 392 KEMEERCIARSKVT-YTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+GN +EA K ++ + L PNS +Y TM++ CK G AL E + G VPN +
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510
Query: 359 MKSLVTGLAGASKVSEAKELIG 380
S + L K EA+ L+G
Sbjct: 511 FCSTMGLLCRDEKWKEAELLLG 532
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 14/315 (4%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLR 142
L +NYF+ LK++ L F I++ G +A R ++E L
Sbjct: 134 LIRSNYFDKAWWIFNVLKSKVVLNAYSF---GIMITGCCEAGYFVRVFRLLAVLEEFGLS 190
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V + L+ D K +F + + G+ P+ TY+ ++ F + +
Sbjct: 191 PNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRL-GLVPNQHTYSVLMNGFFKQGLQREGFQ 249
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ M+R I PNA ++ L++ + + + KV M G+ GV YN+ I LC
Sbjct: 250 MYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +K EA L+ ++ G+ PN VTY+ I GFC G + A + + + +SGLSP
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
Query: 323 VYFTMVYFMCKGGDYETALGFCKE----SIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y T++ K + AL KE IA+ V +T + L K E L
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIARSKV-TYTILIDAFARLNYTDKACEMHSL 428
Query: 379 I---GLVKEKFTKNV 390
+ GLV + +T +V
Sbjct: 429 MEKSGLVPDVYTYSV 443
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+++ L+P + ++ I S+ G ++E++ R +++ + I + +
Sbjct: 360 KSSGLSPT----LVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFAR 415
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N T+ A M++ L V ++ L+ + + KE + F + + ++P+
Sbjct: 416 LNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMH-LQPNSV 474
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
YN +I +C+ S A +L EM + PN +SF + + ++EK+++ +L M
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQM 534
Query: 243 ERYGMKSGVSMY 254
G+K VS+Y
Sbjct: 535 INSGLKPSVSLY 546
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 31/368 (8%)
Query: 41 KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE 100
K L LK+E N L ++ A + L ++ I +L +GI L+
Sbjct: 39 KESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQL 98
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+K NE I Y +A + E A++TF + E + SV +N +L AL
Sbjct: 99 MKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENK 158
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-- 218
++ + ++ K GI+ ++ TYN ++KA C++ +A +LAEM K P+A S
Sbjct: 159 FQMINGIYNNM-KRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYT 217
Query: 219 ----------------------------FGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ AL+ GF +E K E+V ++ M G+
Sbjct: 218 TVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPD 277
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y+ I++L ++ A A+L +M +G PN T++ + G+ G EA +
Sbjct: 278 VITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWN 337
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G PN+ Y T+++ +C G A+ ++ G PN TT +L+ G A A
Sbjct: 338 RMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAG 397
Query: 371 KVSEAKEL 378
+ A E+
Sbjct: 398 DLVGASEI 405
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 2/262 (0%)
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+++ V +NAL+ +EV +F E GI PD+ TY+ VI E +
Sbjct: 238 RIKSFVPVYNALINGFCREHKMEEVFELFNEMA-VEGIDPDVITYSTVINTLSEMGNVEM 296
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A ++LA+M + PN +F +L+ G++ + + + M + G + YN IH
Sbjct: 297 ALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIH 356
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC K EA ++ +M G+ PN TYS I GF K G+ A + + M +G P
Sbjct: 357 GLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLP 416
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N VY MV +C+ + AL + PN T + + GL + K A +++
Sbjct: 417 NVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVL 476
Query: 380 GLVKE-KFTKNVDTWNEIEAGL 400
+++ NV T+NE+ GL
Sbjct: 477 NQMRQYGCAPNVTTYNEVLDGL 498
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H + YG+ M E AV ++M+ + + + ++ L+ A D ++ + T
Sbjct: 356 HGLCSYGK--MVE-AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMI-T 411
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G P++ Y ++ C +S + A ++ M + PN +F + G K E
Sbjct: 412 NGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEW 471
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
KVL M +YG V+ YN + L ++ EA ++ E+ +K N VTY+ +
Sbjct: 472 AMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILS 531
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG-WV 353
GFC G F+ A + + G P+S Y T++Y CK G+ +TA+ KG
Sbjct: 532 GFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGY 591
Query: 354 PNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
P+ T SL+ G+ V EA L ++ E N TWN + GL
Sbjct: 592 PDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 33/304 (10%)
Query: 129 AVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ FK + + + +H+ + ++ L +D ++ + ++ K GI + D + V
Sbjct: 56 ALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYL-LQLMKLEGISCNEDLFVIV 114
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A+ + + A + KP+ + ++ E K++ +N + M+R G+
Sbjct: 115 INAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGI 174
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS----------------- 290
+ V YN+ + +LCK + A+ LL EM KG P++V+Y+
Sbjct: 175 ELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARE 234
Query: 291 -------------HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
I GFC++ EE + + M+ G+ P+ Y T++ + + G+
Sbjct: 235 LSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNV 294
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
E AL + +G PN T SL+ G ++ EA +L +++E N +N +
Sbjct: 295 EMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTL 354
Query: 397 EAGL 400
GL
Sbjct: 355 IHGL 358
>gi|296089012|emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 44/368 (11%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
+P+ S + + L+ S+S+P EI A+L P +F I I KL A F+
Sbjct: 54 SPIGSPSRVQ---KLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSL 110
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ L LK+ N + I +YG+AN+ + A++TF M + + N LL
Sbjct: 111 MQDLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQ 170
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L ++Y + YG+ PD +YN ++ AFC + D S AY++ +M ++ +
Sbjct: 171 LLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVA 230
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ S+ L+ G LC+ + A L
Sbjct: 231 PDVESYRILMQG-----------------------------------LCRKSQVNRAVDL 255
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L++ML+KG P++++Y+ F G C G ++EAK + M + G S + SV+ ++ C
Sbjct: 256 LEDMLNKGYVPDALSYTTF--GLCDQGLYDEAKNYVEEMLSKGFSLHFSVFHALINGFCN 313
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
G E A +E + G P+ T +++ + K+ + + +K + T N
Sbjct: 314 VGKLEEACEVLREMLRHGEAPHTETWVAIIPRICEVDKLVRMENIFDEALKLEITPNTRL 373
Query: 393 WNEIEAGL 400
+EAG+
Sbjct: 374 ---VEAGI 378
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
++ LL A +E + + E + G++PD Y +V+ + C+S+ A +L EM
Sbjct: 85 YSTLLSGYCKAGKVEESRELLKEV-ISRGLRPDALMYTKVMASLCKSARLGEALELLEEM 143
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
R P +F L++G +E+ E + +LQ M G+K+ V YN + LCK +
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRL 203
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ LL+ M + G P+ V YS F+YG CK G A + M +S PN Y T+
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTI 263
Query: 328 VYFMCKGGDYETAL------------------------GFCK-----------ESIAK-G 351
+ +CK G +TAL G CK E++A+ G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
P+ T SLV GL A K+ EA E + + E N T+ + GL
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 13/258 (5%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + M ++ V +N L+ L A +E ++ +E K G PD+ Y+
Sbjct: 169 EMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ-LLERMKASGCAPDVVAYSS 227
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ C+S +A+ +L +M PN ++ ++ G K K ++ L+MME+
Sbjct: 228 FVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK---IDTALEMMEQMA 284
Query: 247 MKSGVSM----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G + Y+ + LCKL + EA+++++ M G +P+ VTYS + G CK G
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-----SIAKGWVPNFT 357
EEA + R M+ G PN+ Y ++V+ +C G A +E P+ +
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVS 404
Query: 358 TMKSLVTGLAGASKVSEA 375
T +L+ GL A ++ +A
Sbjct: 405 TYNALIGGLCKAGRIDDA 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 8/260 (3%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ K+ E+ ++ G+K D+ TYN ++ C++ A +L M
Sbjct: 155 FNTLISGCCREKNL-EMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
P+ ++ + V G K K + ++VL+ M V YN + LCK K
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKI 273
Query: 268 AEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A ++++M S G N V YS + G CK G +EA+ M+ +G P+ Y +
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------G 380
+V +CK G E A+ +E +G PN T SLV GL +++EA+ ++ G
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393
Query: 381 LVKEKFTKNVDTWNEIEAGL 400
+ +V T+N + GL
Sbjct: 394 GGGDHCPPSVSTYNALIGGL 413
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
MDR PN+ +F ALV GF K+ + D ++L+ M G++ V YN + LCKL +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 267 CAEAKALLDEMLSKGMK--PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA+ L+ +M+S+G + P+ VTYS + G+CK G EE+++ + + + GL P++ +Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
++ +CK AL +E I G P T +L++G + A L+ +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 385 KFTK-NVDTWNEIEAGL 400
K +V T+N + GL
Sbjct: 181 SGVKADVVTYNTLMDGL 197
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIK 189
R + M ++ +V ++N LL L + + E + + + G PDL TY+ ++
Sbjct: 31 RLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLS 90
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+C++ + +L E+ + ++P+A + ++A K + + ++L+ M R G
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP 150
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ +N I C+ + A +LL M + G+K + VTY+ + G CK G +EA++
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M SG +P+ Y + VY +CK G A ++ PN T +++ GL +
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270
Query: 370 SKVSEAKELI 379
K+ A E++
Sbjct: 271 GKIDTALEMM 280
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FNAL+ + + +R +E GI+P++ +YN +++ C+ A ++ +M
Sbjct: 13 FNALVNGFSKQGRPGDCER-LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71
Query: 208 DRKSIK--PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+ + P+ ++ L++G+ K K E+ ++L+ + G++ MY + SLCK
Sbjct: 72 ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ EA LL+EM+ G P +T++ I G C++ N E A + M+ SG+ + Y
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T++ +CK G + A + A G P+ S V GL + KV A +++ +++
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251
Query: 386 -FTKNVDTWNEIEAGL 400
NV T+N I GL
Sbjct: 252 DHDPNVVTYNTILDGL 267
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEH 128
D + ++ ++ L +A Q LE +K PD+ A+S +YG ++ +
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV-----AYSSFVYGLCKSGKVLN 240
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M + +V +N +L L + + + + G ++ Y+ V+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + A S++ M R +P+ ++ +LV G K K E+ + ++ M G K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-----MKPNSVTYSHFIYGFCKDGNFE 303
Y +H LC + AEA+ +++EM S G P+ TY+ I G CK G +
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+A KF++ M + G P+ Y T+V + + G
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 15/258 (5%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E++LE +A+ P D +A+S + L ++ Q LE++ R + +
Sbjct: 207 EQLLERMKASGCAP----DVVAYSSFVYGLCKSGKVLNAHQVLEQM--RDSDHDPNVVTY 260
Query: 116 SIILYG--QANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ IL G ++ + A+ ++M +V ++ ++ L +E + V +E
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSV-MEAM 319
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G +PD+ TY+ ++ C++ A + EM + KPNA ++ +LV G +
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 233 EDVNKVLQMMERYG-----MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ ++++ M G VS YN I LCK + +A M S+G P+ V
Sbjct: 380 AEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 288 TYSHFIYGFCKDGNFEEA 305
+YS + G + G +A
Sbjct: 440 SYSTIVEGLARSGRALQA 457
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 12/305 (3%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L +L PD+ H + L +H V ++ R V F L+ L
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCL-------DHRVSEALDLFHQICRPDVLTFTTLMNGL-- 192
Query: 158 AKDYKEVKRV-FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPN 215
++ + V+ V ++ G++PD TY + C+ D+ SA ++L +M+ S IKPN
Sbjct: 193 CREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ A++ G K+ ++ D + + M+ G+ + YN I C + + A+ LL
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EML + + PN VTY+ I F K+G F EA + Y M G+ PN+ Y +M+ CK
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ A KG P+ T +L+ G GA ++ + EL+ + + N T+N
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432
Query: 395 EIEAG 399
+ G
Sbjct: 433 TLIHG 437
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E ++ +V ++A++ L + + +FIE + GI P++ TY
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-QDKGIFPNIVTY 291
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S+A +L EM + I PN ++ AL+ F KE K+ + ++ M
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ YN I CK + A+ + M +KG P+ T++ I G+C ++
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M GL N+ Y T+++ C GD AL ++ I+ G P+ T +L+
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Query: 365 GLAGASKVSEAKEL 378
GL K+ +A E+
Sbjct: 472 GLCDNGKLKDALEM 485
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV FN L+ A+ + V ++ + + I+ D+ ++
Sbjct: 63 EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ-IRCDIYSFTI 121
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G + + V++ L + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR---VSEALDLFHQI- 177
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P+ +TY F+ G CK G+ A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + + E KG PN T ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S A+ L+ +++ K + NV T+N +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + ++ +N ++ I+ + +R+ E + I P++ TYN +I AF
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK-ISPNVVTYNALINAFV 334
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + EM + I PN ++ +++ GF K+++ + + +M G V
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I C ++ + LL EM +G+ N+VTY+ I+GFC G+ A + M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------------GWVPNFTTMK 360
+SG+ P+ T++ +C G + AL K ++ K G P+ T
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 361 SLVTGLAGASKVSEAKEL 378
L+ GL K EA+EL
Sbjct: 514 ILICGLINEGKFLEAEEL 531
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 12/271 (4%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM L + +N L+ + D + + + G+ P
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCP 461
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T N ++ C++ A + M + ++P+ ++ L+ G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + M SK PN VT
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ ++ +Y T++Y K G+ AL +E I
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G P+ T+++++TG ++ A ++
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERAVAML 672
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
I KLS+A F + + +L E I YG A + A+RTF + L
Sbjct: 142 IEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGL 201
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ SV +FN LL L K + V +F K +GI P++ T N ++KA C+ +D +A
Sbjct: 202 QPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAI 261
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM PN ++ ++ G+ + +V + G + Y + +
Sbjct: 262 RVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGY 321
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK + +A ++DEM ++PN VTY I +CK+ E M P+S
Sbjct: 322 CKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS 381
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++ ++ +C+ G E A K+ + K P+ +L+ L KV EA++L
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE 441
Query: 382 VKEKFTKNVDTWNEIEAGL 400
++ + T+N + AG+
Sbjct: 442 FEKGSIPSTLTYNALIAGM 460
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKE 135
+F+ +N L + F+ + + + + + F + ++ + N + A+R +E
Sbjct: 207 SFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEE 266
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M +V + +L D +RVF E G PD TY ++ +C+
Sbjct: 267 MPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEI-LDRGWVPDPTTYTILMDGYCKKG 325
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGV--- 251
A ++ EM+ ++PN ++G ++ + KE+K +V +L M+E+ + S
Sbjct: 326 RFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCC 385
Query: 252 -------------------------------SMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ + IH LCK K EA+ L DE K
Sbjct: 386 RVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEK 444
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G P+++TY+ I G C+ G EA + + M G PN+ Y ++ CK G+
Sbjct: 445 GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREG 504
Query: 341 LGFCKESIAKGWVPNFTT 358
+ +E + G +PN T
Sbjct: 505 IRVMEEMLDNGCLPNKAT 522
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E +++F EF K G P TYN +I CE + A + M K PNA ++ L
Sbjct: 434 EARKLFDEFEK--GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF K + +V++ M G + Y + + L +L E +L S+G
Sbjct: 492 IKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRG- 550
Query: 283 KPNSVTYSHFIYGFCKDGNFE-EAKKFYRIMSNSG 316
++ + F+ F GN + E K RI+ S
Sbjct: 551 GVDAECWGVFLAKFVNGGNIDVEGAKIDRILVESA 585
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY-GQANMTEHAVRTFKE 135
A S +N L E+ + + +L +L L+ + I Y ++ E A KE
Sbjct: 156 AISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKE 215
Query: 136 MDEHKLRH-SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
M + + + ++ ++ L+ L + KE +F E I PD TYN +I F
Sbjct: 216 MKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCW 275
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A I+ M PN ++ AL++GF KE + E+ + M+ +G+K Y
Sbjct: 276 GKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGY 335
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ I+ C+ + EA ALL+EM K + VT + + GFC +G EEA +S+
Sbjct: 336 TILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSS 395
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ N + Y ++ +C+ GD + AL ++++G+VP+ T L+ GL A +
Sbjct: 396 EGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADD 455
Query: 375 A-KELIGLVKEKFTKNVDTW 393
A L GL + F D+W
Sbjct: 456 AVVALYGLAEMGFKPEQDSW 475
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 8/356 (2%)
Query: 28 LSSGDKTPLTSKDKTR-----AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAI 82
L KT L + K + A+ L+K E +P+ LEI + + +S I
Sbjct: 31 LDPPPKTLLEPRRKPKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTII 90
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKL 141
+KL+ A F + L ++ +E + + + +++ E V F ++ +
Sbjct: 91 DKLARAKKFQAVDALLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVRE 150
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ S+ A + L L +K ++ ++ K + +KP+ +N IK C+S D SA+
Sbjct: 151 KPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAF 210
Query: 202 SILAEMDRKSIK-PNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVSMYNVRIH 259
+++ EM + SI PN ++ L+ G + + ++ ++ +M+ + + YNV I+
Sbjct: 211 AVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLIN 270
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
K AK +++ M S G PN YS + GFCK+G EEA + M GL
Sbjct: 271 GFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQ 330
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ Y ++ + C+ G + A+ +E + T+ L+ G G + EA
Sbjct: 331 DTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEA 386
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 8/267 (2%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTR----PDLQNERFHAHSIILYGQANMT 126
S+ + + +S ++ L E+ + EE+ ++ PD + +G+
Sbjct: 222 SYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGK---V 278
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + + M + +V ++AL+ +E F E K +G+K D Y
Sbjct: 279 DRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEM-KIFGLKQDTVGYTI 337
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC A ++L EM K + + L+ GF E + E+ +L + G
Sbjct: 338 LINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEG 397
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + Y + ++SLC+ +A LL LS+G P+ T + + G CK G ++A
Sbjct: 398 IYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAV 457
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++ G P + +V F+C+
Sbjct: 458 VALYGLAEMGFKPEQDSWALLVEFVCR 484
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +EM E K + + N LL +E + + GI + +Y
Sbjct: 349 DEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRL-SSEGIYLNKASYRI 407
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ + C+ D A +L + P+ ++ L+ G K +D L + G
Sbjct: 408 VLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMG 467
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
K + + + +C+ RK A LLDE+
Sbjct: 468 FKPEQDSWALLVEFVCRERKLLLAFELLDEL 498
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---TYGIKPDLDTY 184
A+ F +M + + S+ FN LL A+ K Y V I K GI+ DL T+
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD----VVISLGKKMEVLGIRNDLYTF 123
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI FC S A SIL +M + +P+ + G+LV GF + + D ++ M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K + YN I SLCK ++ +A E+ KG++PN VTY+ + G C + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M ++PN Y ++ K G A +E + P+ T SLV
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303
Query: 365 GLAGASKVSEAKELIGLVKEK 385
GL ++ EA ++ L+ K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + N AV +M E + + A+NA++ +L K + F E + GI+P
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY ++ C SS S A +L++M +K I PN ++ AL+ F K K + ++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + + Y+ ++ LC + EA + D M+SKG + V+Y+ I GFCK
Sbjct: 284 EEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K +R MS GL N+ Y T++ + GD + A F + G P+ T
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 360 KSLVTGLAGASKVSEA 375
L+ GL ++ +A
Sbjct: 404 NILLGGLCDNGELEKA 419
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 157/331 (47%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
DR+ +N N + ++ E+ +PD+ S+ + N A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN---DAF 210
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FKE++ +R +V + AL+ L + + + R+ + K I P++ TY+ ++ A
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 269
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
F ++ A + EM R SI P+ ++ +LV G ++ ++ N++ +M G +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I+ CK ++ + L EM +G+ N+VTY+ I GF + G+ ++A++F+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SP+ Y ++ +C G+ E AL ++ + + T +++ G+
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
KV EA L + K K ++ T+ + +GL
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A + ++M + P+ F L++ K +KY+ V + + ME G+++ + +N+
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I+ C + + A ++L +ML G +P+ VT + GFC+ +A M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ +CK A F KE KG PN T +LV GL +S+ S+A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 378 LIG-LVKEKFTKNVDTWNEI 396
L+ ++K+K T NV T++ +
Sbjct: 247 LLSDMIKKKITPNVITYSAL 266
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ +N L ++ ++ ++ L ++ + N ++ + + + A F+E
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +++L+ L + E ++F + + G D+ +YN +I FC++
Sbjct: 286 MVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ EM ++ + N ++ L+ GF++ + + M+ +G+ + YN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + LC + +A + ++M + M + VTY+ I G CK G EEA + +S
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 316 GLSPNSSVYFTMVYFMCKGG 335
GL P+ Y TM+ +C G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 14/263 (5%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ + + L+ + + A + F M V ++N L+ AK ++
Sbjct: 293 PDIVTYSSLVNGLCLHDR---IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
++F E + G+ + TYN +I+ F ++ D A ++MD I P+ ++ L+
Sbjct: 350 MKLFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G + E + + M++ M + Y I +CK K EA +L + KG+KP
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+ VTY+ + G C G E + Y M GL N GD +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELI 520
Query: 345 KESIAKGWVPNFTTMKSLVTGLA 367
K+ ++ G+ P+ +K + +G+
Sbjct: 521 KKMLSCGYAPSL--LKDIKSGVC 541
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 3/360 (0%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L LLKSE NP + +A P + + + +LSEA + + +E ++
Sbjct: 11 KHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIR 70
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDY 161
++ +E I YG+ +M + A+ FK M E + ++N LL A AK +
Sbjct: 71 SQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQW 130
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+V+ +F F +T G+ P+L TYN +IK C+ + A L M ++ KP+ S+
Sbjct: 131 VKVESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYST 189
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML-SK 280
++ K K +D ++ M + V+ YN+ I K + A L D++L
Sbjct: 190 VINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDS 249
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ PN T++ I G K G ++ K + M + + Y ++++ +C G+ + A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKA 309
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
E + + + T +++ G K+ E+ EL +++++ + N+ ++N + GL
Sbjct: 310 ESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGL 369
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ Y +I C+ A +++ EM + ++ N+ AL+ G ++ + D + ++
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLM 487
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + G V YN+ I LC+ K EA A + EML G+KP+ TYS + G C+D
Sbjct: 488 RGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRD 547
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E A + + SGL P+ ++ +++ +C G + A+ + N T
Sbjct: 548 RKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ G + A + G + K ++ ++N I GL
Sbjct: 608 NTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGL 649
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 1/294 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + I I+ L Y N ++E++++ + +A I + E A
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM +H + + NAL+ L + + K G P + +YN +I CE
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKN-GCLPTVVSYNILICGLCE 511
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + + EM +KP+ ++ L+ G ++ K E ++ + G++ V M
Sbjct: 512 AGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMM 571
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ IH LC + K +A ++ M + N VTY+ + G+ K + A + M
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMY 631
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
GL P+ Y T++ +C A+ F ++ G P T LV +
Sbjct: 632 KMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 142 RHSVG--AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
R+SV ++N L+ L E ++ P G D TY I C + +
Sbjct: 354 RNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADNTTYGIFIHGLCVNGYVNK 412
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A ++ E++ K + ++ +++ K+ + E+ + +++ M ++G++ + N I
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
L + + ++A L+ M G P V+Y+ I G C+ G F EA F + M +GL P
Sbjct: 473 GLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKP 532
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ Y ++ +C+ E AL + + G P+ L+ GL K+ +A ++
Sbjct: 533 DLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 380 GLVKEK-FTKNVDTWNEIEAG 399
++ + T N+ T+N + G
Sbjct: 593 ANMEHRNCTANLVTYNTLMEG 613
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 113/254 (44%), Gaps = 3/254 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F EM E ++ V +N L+ KD+K +++ + + + P++ T+N
Sbjct: 201 DDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNI 260
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERY 245
+I + I M + + + ++ +L+ G E + V +++ER
Sbjct: 261 MISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERK 320
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
V+ YN + C+ K E+ L ++ + N V+Y+ I G ++G +EA
Sbjct: 321 AFIDVVT-YNTMLGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLENGKIDEA 378
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+R+M G + +++ Y ++ +C G ALG +E +KG + S++
Sbjct: 379 TMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDC 438
Query: 366 LAGASKVSEAKELI 379
L ++ EA L+
Sbjct: 439 LCKKRRLEEASNLV 452
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 122/284 (42%), Gaps = 11/284 (3%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H + + G N A+ +E++ V A+ +++ L + +E + E K
Sbjct: 402 HGLCVNGYVN---KALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSK- 457
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G++ + N +I S S A ++ M + P S+ L+ G + K+ +
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGE 517
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ ++ M G+K + Y++ + LC+ RK A L + L G++P+ + ++ I+
Sbjct: 518 ASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIH 577
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV--YFMCKGGDYETAL-GFCKESIAKG 351
G C G ++A M + + N Y T++ YF + + T + G+ + G
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKM---G 634
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
P+ + +++ GL +VS A E + V TWN
Sbjct: 635 LQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWN 678
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 45/356 (12%)
Query: 89 NYFN-GISQYLEELKTRPDLQNERFHAHSIIL----YGQANMTEHAVRTFKEM-DEHKLR 142
NY N G +E+L +R L+N S I+ YG+A++ E AV F M DE + +
Sbjct: 86 NYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCK 145
Query: 143 HSVGAFNALLLALTIAKDYK---EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
SV +FN++L + Y E + I P+ ++N VIKA C+
Sbjct: 146 RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDR 205
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A + M K P+ ++ L+ G KEE+ ++ +L M+ G +YNV I
Sbjct: 206 AIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LCK + L+D M KG PN VTY+ I+G C G ++A M +S P
Sbjct: 266 GLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 320 NSSVYFTMVYFMCKG-----------------------------------GDYETALGFC 344
N Y T++ + K G E A+
Sbjct: 326 NDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLW 385
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
K+ KG PN +++ GL K +EAKE++ G++ NV T++ + G
Sbjct: 386 KKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKG 441
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 11/305 (3%)
Query: 76 LAFSIAINKLSEANYFNG---ISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAV 130
L+F++ I L + + + + + + E K PD + + ++ G + + AV
Sbjct: 188 LSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPD-----GYTYCTLMDGLCKEERIDEAV 242
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
EM S +N L+ L D V ++ ++ G P+ TYN +I
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKL-VDNMFLKGCFPNEVTYNTLIHG 301
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C A S+L M PN ++G L+ G K+ + D ++L ME G +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+Y+V I L K K EA L +M KG +PN V YS I G C++G EAK+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M +SG PN Y +++ K G E A+ +E G N L+ GL G
Sbjct: 422 GMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVG 481
Query: 371 KVSEA 375
+V EA
Sbjct: 482 RVKEA 486
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ Y+ VI C + A IL M PN ++ +L+ GF+K E+
Sbjct: 392 GCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEA 451
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + M+ G Y+V I LC + + EA + +ML+ G+KP++V YS I G
Sbjct: 452 IQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKG 511
Query: 296 FCKDGNFEEAKKFYRIM---SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
C G+ + A K Y M P+ Y ++ +C D A+ + +G
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGC 571
Query: 353 VPNFTTMKSLVTGLAGASKVSE 374
P+ T + + L+ S E
Sbjct: 572 DPDVITCNTFLNTLSEKSDSCE 593
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 20/273 (7%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S I+ L N + L + + L N ++ + + + ++E A++ ++E
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
MDE + ++ L+ L KE V+ + T GIKPD Y+ +IK C
Sbjct: 458 MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKM-LTIGIKPDTVAYSSMIKGLCGIG 516
Query: 196 DSSSAYSILAEM---DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+A + EM + +P+ ++ L+ G ++ +L M G V
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVI 576
Query: 253 MYNVRIHSLC-KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
N +++L K C E ++ L+E++++ +K V+ G C K +
Sbjct: 577 TCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVS------GAC---------KIVEV 621
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
M L+P +S + +V +CK A+ C
Sbjct: 622 MLGKYLAPKTSTWAMIVPEICKPKKINAAINKC 654
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +N ++ A+ D + + + P + G KP+ YN V+K C A +
Sbjct: 15 NVVTYNVIIDAMCREGDVDQARELLNSLP-SRGCKPNTVNYNTVLKGLCSIERWVDAEEL 73
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L EM R++ PN ++ +V ++ + V + L+ M ++G + V YN I +C+
Sbjct: 74 LDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCE 133
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
A LL M S G KP+ VTY+ + G C +E+A++ MS + P++
Sbjct: 134 QGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVT 193
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ T++ F+C+ G A K+ KG PN TT +++ GLA A K+ +A EL+
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELL 249
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 154/362 (42%), Gaps = 49/362 (13%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
+++++ RA P + + +++ I+ + + + L L +R P+ N
Sbjct: 2 ELIDLMRAEGCEP----NVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN---- 53
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++ +L G ++ A EM + N ++ L+ ++V R ++E
Sbjct: 54 -YNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTR-YLEK 111
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+G ++ TYN VI CE SA +L+ M KP+ ++ L+ G ++
Sbjct: 112 MSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQ 171
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ED +++ M + +N I LC+ +A + +M KG PNS TYS
Sbjct: 172 WEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYST 231
Query: 292 FIYGFCKDGNFEEA--------------KKFYRIMS--------------------NSGL 317
I G K G E+A K Y++++ +SG+
Sbjct: 232 IIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGI 291
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
SP + ++ T++ +C+ G + A+ + ++ G +P+ T L+ GL+ + EA+E
Sbjct: 292 SPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARE 351
Query: 378 LI 379
L+
Sbjct: 352 LV 353
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 112/277 (40%), Gaps = 36/277 (12%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
++ +N LS +++YLE++ N + I + + A+ M
Sbjct: 88 TVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNM 147
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ + +N LL L A +++ + + I+ + + PD T+N +I C+
Sbjct: 148 QSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCL-PDNVTFNTIISFLCQKGL 206
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYK---------------------------- 228
A+ + +M K PN++++ ++ G K
Sbjct: 207 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLL 266
Query: 229 ------EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
E+K E+V +V+ ++ G+ ++N + LC+ K A +L +M+S G
Sbjct: 267 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGC 326
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLS 318
P+ +TY I G +G +EA++ R+ S LS
Sbjct: 327 MPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLS 363
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ F+ +H R +L L K +K V + E + G
Sbjct: 73 ITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK + EA L EML G+ PN VT++ I G
Sbjct: 192 RLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A YR M N G SP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A EL ++KE + + + GL Q
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQ 358
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMRASGVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + PN +F L+ G K + + + + M G
Sbjct: 214 NGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I+ LCK +A+ LLDEM KG+KP+ +TY+ I G CK+G+ E A +
Sbjct: 274 PDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFEL 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + + VY +++ +C+ G A +E + G P+ T ++
Sbjct: 334 RERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCK 393
Query: 369 ASKVSEAKELI 379
V +A EL+
Sbjct: 394 KGDVKKASELL 404
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN +I C+ D A +L EM RK +KP+ ++ L+ G KE E
Sbjct: 271 GFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M + ++ +Y I LC+ + +A+ +L EML G+KP+ TY+ +
Sbjct: 331 FELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNE 390
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSP 319
FCK G+ ++A + R M +G P
Sbjct: 391 FCKKGDVKKASELLREMQRNGRVP 414
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 141/322 (43%), Gaps = 32/322 (9%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH- 143
L A +G+ L+E++ R E +I + +A + A++TF + R
Sbjct: 8 LPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 67
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V +N LL AL V V+ K G+ P++ TYN +I+A C++ +A +
Sbjct: 68 GVRVYNHLLDALLRENMVGAVVPVYDNMRKA-GVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYE------------------------------ 233
L EM RK P+ S G +V+G K + E
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 186
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+V V+ M + G++ V Y + + CK R+ A A+L M+S G PN +T++ +
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GF +DG +A + M + G +P++ Y ++ +C GD + AL F +
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306
Query: 354 PNFTTMKSLVTGLAGASKVSEA 375
PN TT +LV G + A + A
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGA 328
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++NA++ AL EV V E + G++P++ TY ++ AFC++ + A +ILA
Sbjct: 171 SYNAVVHALCGEFRMWEVFSVVNEMVQR-GLQPNVVTYTTIVDAFCKARELRMACAILAR 229
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M PN +F ALV GF+++ K D + M G YNV I LC +
Sbjct: 230 MVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD 289
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A + M + PN+ TYS + GF G+ + A + M +SG PN VY
Sbjct: 290 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 349
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
M+ +CK ++ A + + PN T +L+ L +V A + G+ +
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409
Query: 386 FTKNVDTWNEIEAGL 400
N T+NE+ GL
Sbjct: 410 CHPNDRTYNELLHGL 424
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P +YN +I+ C D A M R ++ PNA+++ LV GF +
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G K V +Y I LCK +A++L+D+ML PN+VT++ I
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 388
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G A + M +G PN Y +++ + + G+++ A E + G+ +
Sbjct: 389 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 448
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
T +++ L A L+G ++ + + T+N I
Sbjct: 449 LVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 490
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 122/291 (41%), Gaps = 1/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ I L G + +K L N ++ + + A + A+ + E
Sbjct: 275 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 334
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +V + ++ L + + + I+ P+ T+N +I C+
Sbjct: 335 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAES-LIDKMLMDNCPPNTVTFNTLIGRLCDCG 393
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ M R PN ++ L+ G ++E ++D ++ M G + + YN
Sbjct: 394 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYN 453
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I+ LC++ A LL M+ +G++P++ T++ I+ +CK+G A M+
Sbjct: 454 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAV 513
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
N Y ++ +C G A+ + + + +G PN T LV +
Sbjct: 514 NCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 33/279 (11%)
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSI 212
L A D V+ E + G+ D I AF + + A D
Sbjct: 7 GLPAAGDVDGVQYALQEM-RLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCR 65
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P + L+ +E V V M + G+ V YN+ I +LC+ + A+
Sbjct: 66 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 125
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF---------------------YRI 311
+LDEM KG P+ V++ + G CK G EEA+ F +R+
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRM 185
Query: 312 ---------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
M GL PN Y T+V CK + A ++ G PN T +L
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 245
Query: 363 VTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
V G KV +A + +V E + + ++N + GL
Sbjct: 246 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 284
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 2/267 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F M + L + ++ L+ + A D ++ E K+ G KP++ Y +I
Sbjct: 293 ALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM-KSSGCKPNVVVYTNMI 351
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A S++ +M + PN +F L+ + V M R G
Sbjct: 352 DVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 411
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN +H L + +A A++ EML+ G + + VTY+ I C+ + A
Sbjct: 412 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 471
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M G+ P++ + +++ CK G A + A N L++ L
Sbjct: 472 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 531
Query: 369 ASKVSEAKE-LIGLVKEKFTKNVDTWN 394
K+S A L+ ++ E N TWN
Sbjct: 532 QGKLSNAMVYLLKMLYEGICPNEATWN 558
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 8/286 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G+ E F+++ + V +++ L+ LT A +E
Sbjct: 391 KPDLTLLNTYMDCVFKAGE---VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 447
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F K G D YN V+ FC+S AY IL EM K ++P +++GA+V
Sbjct: 448 TSNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K ++ ++ + + + G++ V +Y+ I K+ + EA +L+EM+ KG+
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 566
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN T++ + K EA ++ M PN+ Y ++ +C+ Y A F
Sbjct: 567 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 626
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
++ +G VPN T ++++GLA +++A L E+F N
Sbjct: 627 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF----ERFKAN 668
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 7/339 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A L P D ++++ I L +A + +++ + + I+ YG
Sbjct: 142 KAQGLKP----DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 197
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A E A + + + E SV +FN++L L + E +F K +P+
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD--AEPNSS 255
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I C AY IL EM+ S+ PN + +V K K E+ K+ +
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G Y I L K + EA L ++ML G N V Y+ I F G
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E+ K ++ + G P+ ++ T + + K G+ E ++ + G++P+ + L
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ GL A + E + +K++ F + +N + G
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 12/348 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
+IL+ A+L P + L +I +++L +A + E R PD +
Sbjct: 275 RILDEMEHASLFP----NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT---Y 327
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I G+ + A R F++M + + + +L+ I ++ +VF E +
Sbjct: 328 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIR 387
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G KPDL N + ++ + I ++ P+ S+ L+ G K +
Sbjct: 388 R-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 446
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + M++ G YN + CK K +A +L+EM K ++P TY +
Sbjct: 447 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G K +EA + + G+ N +Y +++ K G + A +E + KG
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 566
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
PN T SL+ L A +++EA +KE K N T++ + GL
Sbjct: 567 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P Y +I A E+ A +L +M + F LV +E + D
Sbjct: 42 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 101
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ ++ ++ + +YNV I K A E+ ++G+KP+ V+Y+ I+ C
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G EA++ + M P + Y TM+ G +E A + +G +P+
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 221
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
+ S++T L KV EA L ++K+ N T+N I
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNII 260
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%)
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+A M R +P S++ L+ + + E ++L+ M+ G + GV ++ + +L +
Sbjct: 33 VAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAR 92
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ A+A AL+DE+ ++P+ V Y+ I F K GN + A KF+ + GL P+
Sbjct: 93 EGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVS 152
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +M++ +CK G A + A+ VP +++ G A + +A +L+ ++
Sbjct: 153 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 212
Query: 384 EK 385
E+
Sbjct: 213 ER 214
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 106/288 (36%), Gaps = 35/288 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + AV M K R + A+ L+ AL A+ + + + + G + +
Sbjct: 22 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEV-GYEVGV 80
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+ +++A + A +++ E+ ++P+ + + F K + K
Sbjct: 81 HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHE 140
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
++ G+K Y I LCK + EA+ L +M ++ P + Y+ I G+ G
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 200
Query: 302 FEEAKKFYRIMSNSGL----------------------------------SPNSSVYFTM 327
FE+A K + G PNSS Y +
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNII 260
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ +C GG E A E PN T+ +V L A K+ EA
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 308
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PN + L A + + +D + +M R + S Y V I +L + R+ A L
Sbjct: 9 PNQAC-ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L +M G + ++ + ++G +A + S L P+ +Y + K
Sbjct: 68 LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G+ + A F E A+G P+ + S++ L A ++ EA+EL
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A++ F M E ++ +V + +LL A + R+F+E + G P T
Sbjct: 163 NRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQR-GYGPSAST 221
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL--QM 241
Y +++ C S AY I + M + P+ +++ +L+ G + + KVL ++
Sbjct: 222 YGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEA-KVLFKEV 280
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E + +YNV I LC+ K EA + M+ KG P TY+ I GF K
Sbjct: 281 LEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANE 340
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A + +R M G SPN+ +Y T + +CK G A F ++S+ +G VP+ T +
Sbjct: 341 VDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNA 400
Query: 362 LVTGLAGASKVSEAKEL 378
L+ GL GA+++ EA L
Sbjct: 401 LIRGLFGANRMDEAHRL 417
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKD----------------------YKEVKRVFIE 170
F+E++ + + + A+NA+L AL + D YK + I+
Sbjct: 68 FQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIK 127
Query: 171 FPKTYG--------IK---PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
KT IK PD TY +I C+ + + A + M K I PN +
Sbjct: 128 TGKTREASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVY 187
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+L+A + K + ++ M + G S Y + + LC + A + M S
Sbjct: 188 TSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRS 247
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR-IMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+G P+ TY+ IYG C G EAK ++ ++ ++ +Y ++ +C+ E
Sbjct: 248 RGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVE 307
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIE 397
AL + KG +P T +L+ G A++V +A +L ++EK F+ N ++
Sbjct: 308 EALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFI 367
Query: 398 AGL 400
GL
Sbjct: 368 DGL 370
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 131 RTFKEMDEHKLRHSVG------AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
R++ D H S G + +L+ +A E K +F E + + D Y
Sbjct: 234 RSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I+ C +S A + A M K P ++ AL+ GF+K + + ++ + ME
Sbjct: 294 NVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEE 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G +Y+ I LCK+ K EA + + +G P++VTY+ I G +E
Sbjct: 354 KGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDE 413
Query: 305 AKKFYRIMSNSGLSPNSSV 323
A + YR M G + S+
Sbjct: 414 AHRLYREMGERGYIADRSL 432
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
K EV +F E ++ G+ + YN ++KA S D + P+ +
Sbjct: 59 KRVGEVCELFQEL-ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLA 117
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++ K K + ++V+ M + + G++ Y I LCK + +A + D M+
Sbjct: 118 YKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMT-YTALISVLCKHNRADDAMKVFDIMV 176
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
K + PN Y+ + C+ + A + + M G P++S Y ++ +C GG
Sbjct: 177 EKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSY 236
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT--WNEI 396
A ++G VP+ T SL+ G A +++EAK L V E +D +N +
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVL 296
Query: 397 EAGL 400
GL
Sbjct: 297 IEGL 300
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD D+YN +++ + S A ++L+ M + P+ + G LV F + ++ +V
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSL---------------------------------C 262
++ Q +E G+ G+ YN + +L C
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 263 KLR--KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
++ K EA ++ EM+ K + P+ +TY+ I CK ++A K + IM + PN
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPN 183
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
VY +++ C+ + A E I +G+ P+ +T L+ L +
Sbjct: 184 VDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGR 234
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + P+ S+ LV G K + +L M G V + + C++++
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
E L E+ S G+ + Y+ + G+F+ KF I G P+ Y T
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
M+ + K G A E I K VP+ T +L++ L ++ +A ++ ++ EK
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 386 FTKNVDTWNEIEA 398
NVD + + A
Sbjct: 180 IVPNVDVYTSLLA 192
>gi|326487462|dbj|BAJ89715.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505214|dbj|BAK02994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 428
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 184/402 (45%), Gaps = 35/402 (8%)
Query: 26 SILSSGDKTPLTSKDKTRAALTL--------LKSESNPEKILEICRAAALTPESH---LD 74
S L+ D +P ++ RAA+ +++E++P+++ + +A +P+ H
Sbjct: 24 SALADVDPSPASAPAPGRAAVRASIIDLQLAVRAETDPDRVHSLVASALSSPDYHRLHTS 83
Query: 75 RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
R FS+A ++L + + L++L + + A ++ L+ + AVR F
Sbjct: 84 RALFSLAASRLDRLRRPDLAASLLDQLLASAPV-SPGLLARALSLFPG---PDDAVRAFS 139
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
R V L L + ++K F + G+ P ++N ++ +S
Sbjct: 140 S-SAPAARSDVSLSALLSALLRAGR-IDDLKSTFKSAESSLGVAPGSASHNVLLHTLVKS 197
Query: 195 SDSSSAYSILAEMDRKSIK----PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
SD +A +L EM +K K P+ S+ L+AGF +++ E+ K+L+ + ++
Sbjct: 198 SDLPAARKLLNEMAKKKFKHRPPPDIISYNTLLAGFSEQDDVEEFEKLLKEINENKLEPN 257
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN R+H + + + + LLD M SKG+ PN VTY+ + G+CK+GN A + ++
Sbjct: 258 VVTYNCRMHWFARKGETFKGEELLDVMESKGVLPNYVTYNALVQGYCKEGNVGAAMRVFK 317
Query: 311 IM---------SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
M S+ G+S +S Y + + + + AL C A P+F +K
Sbjct: 318 RMKVMKRREGRSDLGVSVHSQTYVLLFRTLVEKERLDDALWLCNSCFAMKAAPSFEAVKG 377
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVD---TWNEIEAGL 400
LV GL + +EAK ++ K F D +W +I L
Sbjct: 378 LVEGLVKGGRSAEAKAVVA--KMNFLVKGDAKVSWEKIAGEL 417
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+R + M + R +V A+N ++ +L + E +F E T GI PD+ TYN
Sbjct: 233 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM-ITKGISPDIFTYN 291
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A C + ++L EM I PN F +V KE + V+ MM +
Sbjct: 292 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 351
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V Y + C + EA + D M+ KG PN +Y+ I G+C+ ++A
Sbjct: 352 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 411
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
MS GL ++ Y T+++ +C G + A+ E +A G +P+ T + L+
Sbjct: 412 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 471
Query: 366 LAGASKVSEAKELI 379
L ++EA L+
Sbjct: 472 LCKNHHLAEAMVLL 485
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 2/277 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ +F M S F LL ++ K Y V + + ++GI PD+ T
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGIPPDVYT 149
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I +FC A+S+LA++ + +P+ ++F L+ G E K + +
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V Y ++ LCK+ + A LL M+ K +PN + Y+ I CKD
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA + M G+SP+ Y ++++ +C +++ E + +PN ++V
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
L ++ A +++ ++K +V T+ + G
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 366
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 11/250 (4%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYG--IKPDLDTYNRVIKAFCESSDSSSAYSILA 205
FN L+ L + E +F KT G +PD+ TY ++ C+ ++S+A +L
Sbjct: 185 FNTLIRGLCVEGKIGEALHLF---DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLR 241
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M +K+ +PN ++ ++ K+ + + + M G+ + YN IH+LC L
Sbjct: 242 SMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLC 301
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ LL+EM++ + PN V +S + CK+G A +M G+ P+ Y
Sbjct: 302 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 361
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------ 379
++ C + + A+ + KG VPN + L+ G ++ +A L+
Sbjct: 362 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 421
Query: 380 GLVKEKFTKN 389
GL+ + T N
Sbjct: 422 GLIADTVTYN 431
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 35/315 (11%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGIS 95
L T AA+ LL+S CR + + +D L +++EA FN S
Sbjct: 227 LCKVGNTSAAIRLLRSMVQKN-----CRPNVIAYNTIIDSLCKD---RQVTEA--FNLFS 276
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLL 153
+ + + PD+ F +S+I + N+ E H EM K+ +V F+ ++
Sbjct: 277 EMITK-GISPDI----FTYNSLI-HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330
Query: 154 ALT------IAKDYKE--VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
AL IA D + +KR G++PD+ TY ++ C S+ A +
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKR---------GVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M K PN S+ L+ G+ + ++ + +L+ M G+ + YN IH LC +
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A AL EM++ G P+ VTY + CK+ + EA + + S L + VY
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 501
Query: 326 TMVYFMCKGGDYETA 340
+ MC+ G+ E A
Sbjct: 502 IAIDGMCRAGELEAA 516
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 159/348 (45%), Gaps = 8/348 (2%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
+ +++ +P +L + + ++ +++ +++L+E F+ I + + +K
Sbjct: 61 VINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120
Query: 105 PDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+ + ++ F H I +YG A A+ T +M + SV FN +L L AK +
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
V V++ PK GI+ D N ++K C+S + +A +L E ++ +PN +F L
Sbjct: 181 VVHEVYMGAPK-LGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTL 239
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G + + ++ ME G+ +N+ I L K ++ EA LL M KG
Sbjct: 240 LHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGC 299
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN+ TY +YG G F EA+ M + G+ P+ Y ++ +CK E
Sbjct: 300 YPNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDW 359
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
K+ + +G+VP K ++ + +S +E I + E F K V
Sbjct: 360 VLKQMVMQGFVPKVGMWKVILRCM-----LSGNEECIDITDEVFEKFV 402
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 150/320 (46%), Gaps = 6/320 (1%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
+ P H +++ I+ L F + L ++ + + N + I Y +
Sbjct: 352 TGIKPNIH----TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E AV + M+ KL + +N L+ + +K + + + + PD+ TY
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK--VLPDVVTY 465
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C S + SAY +L+ M+ + + P+ ++ +++ K ++ E+ + +E+
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ V MY I CK K EA +L++MLSK PNS+T++ I+G C DG +E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M GL P S +++ + K GD++ A ++ ++ G P+ T + +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 365 GLAGASKVSEAKELIGLVKE 384
++ +A++++ ++E
Sbjct: 646 TYCREGRLLDAEDMMAKMRE 665
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 140/292 (47%), Gaps = 4/292 (1%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+QY+ ++ L + F S+I+ Y Q + A + F EM R + A+ L+
Sbjct: 238 NQYVSKI-VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L +A+ E +F++ K P + TY +IK+ C S S A +++ EM+ IK
Sbjct: 297 GLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PN ++ L+ + K+E ++L M G+ V YN I+ CK +A +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++ M S+ + PN+ TY+ I G+CK N +A M + P+ Y +++ C+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G++++A +G VP+ T S++ L + +V EA +L +++K
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 2/290 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +E +++R N R + I Y ++N+ A+ +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNK 452
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E K+ V +N+L+ + ++ R+ + G+ PD TY +I + C+S
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + +++K + PN + AL+ G+ K K ++ + +L+ M +N
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LC K EA L ++M+ G++P T + I+ KDG+F+ A ++ M +S
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
G P++ Y T + C+ G A + G P+ T SL+ G
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 11/302 (3%)
Query: 108 QNERFHAHSIILYGQAN----------MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
++ERF ++ G N + + + + EM E K+ ++ +N ++
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ +E + ++ G+ PD TY +I +C+ D SA+ + EM K + N
Sbjct: 231 LGNVEEANQ-YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G + ++ + M+ V Y V I SLC + +EA L+ EM
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
G+KPN TY+ I C FE+A++ M GL PN Y ++ CK G
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIE 397
E A+ + ++ PN T L+ G ++ L +++ K +V T+N +
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 398 AG 399
G
Sbjct: 470 DG 471
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNA 150
G+ + E K PD+ ++ ++ GQ + A R M++ L + +
Sbjct: 448 GVLNKMLERKVLPDVV-----TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ +L +K +E +F + G+ P++ Y +I +C++ A+ +L +M K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ PN+ +F AL+ G + K ++ + + M + G++ VS + IH L K A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ +MLS G KP++ TY+ FI +C++G +A+ M +G+SP+ Y +++
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G A K G P+ T SL+ L
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PDL TY+ +IK + + ++ A+ +L M +P+ +F +L+
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI------------ 714
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE---AKALLDEMLSKGMKPNSVTYSHF 292
+L+M +YG + G LC + E LL++M+ + PN+ +Y
Sbjct: 715 KHLLEM--KYGKQKGSE------PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 293 IYGFCKDGNFEEAKKFYRIMS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G C+ GN A+K + M N G+SP+ V+ ++ CK + A + I G
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 352 WVPNFTTMKSLVTGL 366
+P + K L+ GL
Sbjct: 827 HLPQLESCKVLICGL 841
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 234 DVNKVLQMMERYGMKSG--VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
D+ + + ER+ +K + YN ++SL + E K + EML + PN TY+
Sbjct: 164 DLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ G+CK GN EEA ++ + +GL P+ Y +++ C+ D ++A E KG
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
N L+ GL A ++ EA +L +K+
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 24/221 (10%)
Query: 98 LEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
+ E PDL F S+I YG T A K M + S F L+
Sbjct: 663 MRENGVSPDL----FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF------LS 712
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
+ K E+K + K G +P+L + ++ + + +L +M S+ PNA
Sbjct: 713 LIKHLLEMK-----YGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNA 760
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERY-GMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
S+ L+ G + KV M+R G+ ++N + CKL+K EA ++D
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+M+ G P + I G K G E ++ + G
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Query: 119 LYGQANMTEH--AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
L +NM E V ++M EH + + ++ L+L + + + ++VF + G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P +N ++ C+ + A ++ +M P S L+ G YK+ + E
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
V Q + + G + + I + K L + M G K +S TYS I G
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+R M + + +V A+N ++ +L + E +F E T GI PD+ TYN
Sbjct: 182 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM-VTKGISPDIFTYN 240
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A C + ++L EM I P+ SF +V KE K + + V+ M +
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V Y + C L + EA + D M+ KG PN ++Y+ I G+CK ++A
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M L P++ Y T+++ +C + A+ E +A +PN T + L+
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 420
Query: 366 LAGASKVSEAKELI 379
L ++EA L+
Sbjct: 421 LCKNRYLAEAMALL 434
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 6/306 (1%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
+Q L L L + RFH+ S+ N + A+ +F M + S FN LL +
Sbjct: 15 TQMLSLLAHFLSLSHNRFHSKSL----HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ K + + + + ++GI P++ T + +I +FC + A+S+LA++ + +P
Sbjct: 71 IAKMKHHSTLLSLSHQM-DSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQP 129
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+ ++F L+ G Y E K + + M G + V Y I+ LCK+ + A LL
Sbjct: 130 DTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
M+ K +PN Y+ I CKD EA + M G+SP+ Y ++++ +C
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
+++ E + +P+ + ++V L KV+EA +++ +++ NV T+
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Query: 394 NEIEAG 399
+ G
Sbjct: 310 TALMDG 315
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ TY +I C+ ++S+A +L M +K+ +PN ++ ++ K+ + +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ + YN IH+LC L + LL+EM+ + P+ V+++ +
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G EA M G+ PN Y ++ C + + A+ + KG +PN
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +L+ G ++ +A L G + +++ + T++ + GL
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 6/322 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVR 131
D + + IN L + + + L + + + Q F ++II L +TE A
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSM-VQKNCQPNVFAYNTIIDSLCKDRQVTE-AFN 222
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F EM + + +N+L+ AL ++K V + E + I PD+ ++N V+ A
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVSFNTVVDAL 281
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A+ ++ +M ++ ++PN ++ AL+ G + ++ KV M G V
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I+ CK+++ +A L EM + + P++VTYS I+G C ++A +
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M PN Y ++ ++CK A+ K P+ + G+ A +
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 461
Query: 372 VSEAKELIGLVKEKFTKNVDTW 393
+ A++L + K + D W
Sbjct: 462 LEAARDLFSNLSSKGLQP-DVW 482
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 4/285 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++ N+ E H EM + K+ V +FN ++ AL E V + +
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR- 300
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ TY ++ C S+ A + M K PN S+ L+ G+ K ++ +
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M R + Y+ IH LC + + +A AL EM++ PN VTY +
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 420
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ EA + + S L P+ V + MC+ G+ E A +KG P+
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T ++ GL + EA +L + E T N +N I G
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 525
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 138/334 (41%), Gaps = 39/334 (11%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
A+ L E + + + + K PD+ + F+ L + +TE A +M +
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVS--FNTVVDALCKEGKVTE-AHDVVDKMIQRG 301
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+ +V + AL+ + + E +VF + G P++ +YN +I +C+ A
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVF-DTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ EM R+ + P+ ++ L+ G E+ +D + M + Y + +
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 420
Query: 261 LCKLRKCAEAKALL-------------------DEML----------------SKGMKPN 285
LCK R AEA ALL D M SKG++P+
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
TYS I G C+ G +EA K +R M +G + N +Y T+ + + A+ +
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 540
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E +A+G+ + +TM V L+ K+++
Sbjct: 541 EMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 61/134 (45%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ N I C + + +A + + + K ++P+ ++ ++ G + ++ +
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M+ G +YN + + + A LL EM+++G ++ T + F+
Sbjct: 502 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561
Query: 297 CKDGNFEEAKKFYR 310
DG + K+ R
Sbjct: 562 SDDGLDQSLKQILR 575
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD Y VI S +A S+L+ +++ + P++ +G+L++GF K E
Sbjct: 623 GLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKA 682
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L M + G++ G+S YN I CK + A+ + + ++ KG+ PN VTY+ I G
Sbjct: 683 VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDG 742
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW--- 352
+CK G+ +A Y M G++P++ VY + GD + AL +E IA+G+
Sbjct: 743 YCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAII 802
Query: 353 -------------------------------VPNFTTMKSLVTGLAGASKVSEAKELIGL 381
VP+ T++++V GL A K+SEA +
Sbjct: 803 SSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVE 862
Query: 382 VKEKFTKNVDT 392
+++K + DT
Sbjct: 863 LQQKNASHRDT 873
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
F + GI PD+ TY+ +I+A+C+ D SA ++ EM N ++ L+ G +
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAG 292
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E+ + ME YG+ Y I+ LCK + +AK LLDEM G+ PN V YS
Sbjct: 293 AIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYS 352
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I GF + GN +EA K + MS +G+ PN Y ++ +CK G A K+
Sbjct: 353 TLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
G++ + T ++ G EA L+ + K + NV T++ I GL Q
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQ 465
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A KEM+++ L + A++ L + K + E G+ P++
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEM-SCAGLMPNV 348
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y+ +I F ++ A+ I+ EM ++PN ++ L+ G K + +++L+
Sbjct: 349 VVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + G + YN+ I + EA LL+EM G+ PN TYS I G C+ G
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A M GL PN+ VY ++ C+ G + A K+ + P+ S
Sbjct: 469 SERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNS 528
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L+ GL+ K+ EA E + EK F N T+ + G
Sbjct: 529 LIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHG 567
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R K+M + +N L++ + + KE + + + GI P++ TY+ +I
Sbjct: 402 ASRILKQMTKIGYMADTMTYN-LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ +S A +L +M +KPNA + L++G+ +E + + L+ M R +
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I L + K EA DEML KG +PN TY I+G+ GN E+A++
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M NSGL+PN +Y ++ K + E K + KG +P+ ++ L+
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640
Query: 369 ASKVSEAKELIGLVKE 384
+ + A ++ ++++
Sbjct: 641 SGHMQAAVSVLSVIEK 656
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 110/204 (53%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P+ TY+ +I+ C+ A IL +M + + ++ ++ G ++ E+
Sbjct: 378 GVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEA 437
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L M + G+ V Y++ I+ LC++ + A LL++M++ G+KPN+ Y+ I G
Sbjct: 438 FLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISG 497
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++G+F A + + M+ L+P+ Y +++ + G + A+ + E + KG+ PN
Sbjct: 498 YCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPN 557
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G + A + +A++L+
Sbjct: 558 DFTYGGLIHGYSMAGNLEKAEQLL 581
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 6/250 (2%)
Query: 156 TIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
+ YK+ RV + K G+ P L N ++K + + + M+
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
I P+ ++ L+ + K E KV++ M G V YN I LC+ EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
EM G+ P+ TY I G CK G ++AK MS +GL PN VY T++
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKN 389
+ G+ + A KE A G PN T +L+ GL ++ A ++ + K + +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 390 VDTWNEIEAG 399
T+N + G
Sbjct: 418 TMTYNLVIEG 427
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
VR F M+ + V ++ L+ A +D + K+V E +T G ++ TYN +I
Sbjct: 230 VRGF--MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRET-GCSLNVVTYNTLIG 286
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C + A+ EM+ + P+ ++GA++ G K + + +L M G+
Sbjct: 287 GLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMP 346
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG--------- 300
V +Y+ I + EA ++ EM + G++PN +TY + I G CK G
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Query: 301 --------------------------NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
N EEA M G+SPN Y ++ +C+
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTW 393
G+ E A G ++ IA G PN L++G S A E L + +E T ++ +
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCY 526
Query: 394 NEIEAGL 400
N + GL
Sbjct: 527 NSLIIGL 533
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 118/306 (38%), Gaps = 27/306 (8%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
L P++ L + I I+ LS + + L ++ + + + I + +A
Sbjct: 623 GLMPDNRL----YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAAD 678
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E AV EM + + + +NAL+ + D + +F G+ P+ TY
Sbjct: 679 MEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI-ICKGLPPNCVTYT 737
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I +C++ D A + EM + + P+A + L AG + + + M
Sbjct: 738 TLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIAR 797
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G +S +N +H CK K E L M+ K + P+ +T + + G + G EA
Sbjct: 798 GYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEA 856
Query: 306 --------------------KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+ M N GL P ++ M+ CK G + AL
Sbjct: 857 HTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIH-NMIQSHCKQGYLDKALMLHD 915
Query: 346 ESIAKG 351
+AKG
Sbjct: 916 ALVAKG 921
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 15/335 (4%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNE-RFHAHSIILYGQANMTEHAVR 131
LD A+SI I + + N + LEE+K R + +E F + + Q NM E A+R
Sbjct: 293 LDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE-ALR 351
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDY---KEVKRVFIEFPKTY--GIKPDLDTYNR 186
+EM + G L++A ++ K Y + F K G+ P+ TY+
Sbjct: 352 LKEEM------INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 405
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C S + A + +M I P+ + +L+ G+ K +E+ +K+ G
Sbjct: 406 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 465
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + + YN+ + LCK K EA +LLD M+++GM PN V+Y+ I G C+ GN + A
Sbjct: 466 V-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 524
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M L PN Y ++ K GD E AL + ++ P T +++ GL
Sbjct: 525 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584
Query: 367 AGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
++SEA++ L ++E F + T+N I G
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 619
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 4/289 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+SI++ G + +E A+ F +M + + FN ++ L E + F
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G P TYN ++ F + + SA ++ EM + PN ++ +L+ GF K +
Sbjct: 601 LEE-GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 659
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ K M G++ V+ Y+ I CK R A+ L E+L G+ PN + Y+
Sbjct: 660 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 719
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GF N E A +Y+ M N + + Y T++ + K G A E ++KG
Sbjct: 720 MISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG 779
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
VP+ T LV GL ++ A++++ + ++ T +V +N + AG
Sbjct: 780 IVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 828
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ +YN +I C + A S+ ++M + +KPN ++ L+ G +K+ E
Sbjct: 499 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 558
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M + +N I+ LCK+ + +EA+ L L +G P+ +TY+ + G
Sbjct: 559 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDG 618
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K+GN + A YR M G+SPN Y +++ CK + AL E KG +
Sbjct: 619 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 678
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T +L+ G + A++L L++ + N +N + +G
Sbjct: 679 VTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 4/274 (1%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S+++ G N E A + +M + + SV N+LL A ++E ++F E
Sbjct: 402 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 461
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G+ ++ TYN ++ C+ A S+L M + + PN S+ ++ G ++
Sbjct: 462 VDC-GVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 519
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ + V M +K V Y++ I K +A L D+MLS + P T++
Sbjct: 520 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 579
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G CK G EA+ + G P+ Y ++V K G+ ++AL +E G
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
PN T SL+ G ++++ A + ++EK
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 673
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 12/300 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQN--ERFHAHSIILYG--------QANM 125
L+ +IA + NG+ + + + R L+N E S + Y + N+
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ ++EM E + +V + +L+ + + E + G++ D+ Y+
Sbjct: 626 -DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM-REKGLELDVTAYS 683
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ D SA + E+ + PN + ++++GF E + M
Sbjct: 684 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 743
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + Y I L K + A L EMLSKG+ P+ +T+ + G C G E A
Sbjct: 744 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 803
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+K M ++P+ +Y T++ + G+ + A E + +G VP+ T L+ G
Sbjct: 804 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ ++N + A++T EM E L V A++AL+ +D + + +F E + G+ P
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV-GLSP 712
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ YN +I F + ++ +A +M I + ++ L+ G KE + + +
Sbjct: 713 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ + ++V ++ LC + A+ +L+EM K M P+ + Y+ I G+ ++
Sbjct: 773 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 832
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
GN +EA + M + GL P+ Y ++ KG
Sbjct: 833 GNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+K D Y+ +I+A C+ +S+ +L EM + P+ ++F +++ +
Sbjct: 287 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 346
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ ++ + M G + + + C A L +++ G+ PN VTYS
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C GN E+A + Y M +G+ P+ +++ K +E A E++ G
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG- 465
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
V N T +++ L K+ EA L+ +V + NV ++N++ G
Sbjct: 466 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 513
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 1/275 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +AN E+A+ F M + V N LL AL E++ ++ + GI
Sbjct: 200 YIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM-VLRGIYG 258
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T + +++A + A E + +K +A ++ ++ K+ ++L
Sbjct: 259 DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 318
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ G + + I + EA L +EM++ G N V + + G+C
Sbjct: 319 EEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 378
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN + A + ++ GL PN Y ++ C G+ E A + G P+ +
Sbjct: 379 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 438
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
SL+ G A EA +L + N+ T+N
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN 473
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 20/278 (7%)
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIAKD 160
+T P QN A L N + A+R FK + + V A+ LL
Sbjct: 94 ETTPLSQNHVIDA----LLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLL-------- 141
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ + P+T+G L NR + + S ++ R + + F
Sbjct: 142 -----HILMRSPETHGHARKL--LNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFN 194
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ + + + E+ M + V N+ + +L + E + L ++M+ +
Sbjct: 195 YLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLR 254
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+ + T + K+G EEA++++R G+ ++ Y ++ +CK +
Sbjct: 255 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
L +E +GWVP+ T S++ + EA L
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRL 352
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 8/286 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G+ E F+++ + V +++ L+ LT A +E
Sbjct: 259 KPDLTLLNTYMDCVFKAGE---VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 315
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F K G D YN V+ FC+S AY IL EM K ++P +++GA+V
Sbjct: 316 TSNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K ++ ++ + + + G++ V +Y+ I K+ + EA +L+EM+ KG+
Sbjct: 375 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 434
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN T++ + K EA ++ M PN+ Y ++ +C+ Y A F
Sbjct: 435 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 494
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
++ +G VPN T ++++GLA +++A L E+F N
Sbjct: 495 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF----ERFKAN 536
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 7/339 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A L P D ++++ I L +A + +++ + + I+ YG
Sbjct: 10 KAQGLKP----DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A E A + + + E SV +FN++L L + E +F K +P+
Sbjct: 66 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD--AEPNSS 123
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I C AY IL EM+ S+ PN + +V K K E+ K+ +
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G Y I L K + EA L ++ML G N V Y+ I F G
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E+ K ++ + G P+ ++ T + + K G+ E ++ + G++P+ + L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ GL A + E + +K++ F + +N + G
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 342
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 12/348 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
+IL+ A+L P + L +I +++L +A + E R PD +
Sbjct: 143 RILDEMEHASLFP----NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT---Y 195
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I G+ + A R F++M + + + +L+ I ++ ++F E +
Sbjct: 196 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIR 255
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G KPDL N + ++ + I ++ P+ S+ L+ G K +
Sbjct: 256 R-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 314
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + M++ G YN + CK K +A +L+EM K ++P TY +
Sbjct: 315 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G K +EA + + G+ N +Y +++ K G + A +E + KG
Sbjct: 375 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 434
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
PN T SL+ L A +++EA +KE K N T++ + GL
Sbjct: 435 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 482
>gi|242034145|ref|XP_002464467.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
gi|241918321|gb|EER91465.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
Length = 440
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 175/374 (46%), Gaps = 33/374 (8%)
Query: 49 LKSESNPEKILEICRAAALT----PESHLDRLAFSIAINKLSEAN--YFNGISQYLEELK 102
+++ES+P +I + A+AL+ P H R FS+A ++L+ L
Sbjct: 67 VRAESDPARIHSLV-ASALSGDDFPRIHTSRQLFSLATSRLTRLRRPDLAASLLDLLLAS 125
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
T P + A ++ LY + A+R F R V + +ALL A A
Sbjct: 126 TPP---SPGLLARALSLYPG---PDDALRAFSS-SPPAARSDV-SLSALLSAFLRAGRLD 177
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK----PNASS 218
E+K ++G+ P ++N ++ A ++S+ ++A +L EM K +K P+ S
Sbjct: 178 EIKSTITLAESSHGVAPGRASHNVLLHALVKNSELAAARKLLDEMANKKLKHRPAPDIIS 237
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++AG ++ E K+L+ + ++ V YN RI K + + + LLD M
Sbjct: 238 YNTVLAGCSVQDDEEGFEKLLKEISLSNLEPNVVTYNCRIQWFSKKGETVKGEELLDVME 297
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM---------SNSGLSPNSSVYFTMVY 329
SKG+ PN +TY+ + G+CK+GN A + ++ M S+ G+S +S VY +
Sbjct: 298 SKGVAPNYLTYNALVQGYCKEGNVGAATRVFKRMKVMKRREGRSDLGVSAHSQVYVVLFR 357
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+ + + AL CK A P F +K LV GL A + +EAK+++ K +F
Sbjct: 358 SLVEKEKLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKAGRSTEAKDVVA--KMEFLVK 415
Query: 390 VD---TWNEIEAGL 400
D W ++ A L
Sbjct: 416 GDAKLAWGKVVAEL 429
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ KEM+ ++H+ ++ L+ D+ R+F E K+ G
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKS-G 517
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD YN +I+AFC+ + A IL +M ++ ++P+ +F ++ GF +
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 577
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L +M R G V YN IH L + + A ++L++M G+ PN TY+ + G+
Sbjct: 578 DILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 637
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + GL + +Y T++ CK G ++AL +E ++ N
Sbjct: 638 AATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
L+ G A V EA +L+ +KE
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKE 725
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I+ + N +E KT N +++ I + Q+ + A E
Sbjct: 348 VTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHE 407
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + A+++++ TI +D K+ VF E K P + +Y +I + +
Sbjct: 408 MEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVF-ERLKECCFTPSIISYGCLINLYVKIG 466
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A +I EM+ IK N ++ L++GF + + ++ + M + G++ ++YN
Sbjct: 467 KVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYN 526
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I + CK+ A +L++M + M+P++ + I GF G+ + A +M S
Sbjct: 527 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS 586
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G +P Y +++ + + E A+ + G PN T ++ G A +++A
Sbjct: 587 GCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKA 646
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 647 FEYFTKIKE 655
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 147/367 (40%), Gaps = 43/367 (11%)
Query: 57 KILEICRAAALTPESHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDLQNER 111
KI ++ +A A++ E + +S+ I+ + F + EE+ + LQ +R
Sbjct: 464 KIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM-LKSGLQPDR 522
Query: 112 FHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ +I + + + A+R ++M + +++ S AF ++ +A D K + ++
Sbjct: 523 AIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDI-LD 581
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G P + TYN +I + A S+L +M I PN ++ ++ G+
Sbjct: 582 LMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATG 641
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK---------- 280
+ ++ G+K V +Y + + CK + A A+ EM S+
Sbjct: 642 DIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYN 701
Query: 281 -------------------------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
G+ PN TY+ +I CK G+ + A+ MS+
Sbjct: 702 ILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDV 761
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL PN Y T++ + + AL +E G P+ LVT L + V E
Sbjct: 762 GLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 821
Query: 376 KELIGLV 382
G++
Sbjct: 822 STYTGIL 828
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H +I + N E AV +M + + + ++ D + F + K
Sbjct: 600 HGLI---RKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKI-KE 655
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G+K D+ Y +++A C+S SA ++ EM + I N + L+ G+ + +
Sbjct: 656 GGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWE 715
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+++ M+ G+ + Y I++ CK A+ ++DEM G+KPN TY+ I
Sbjct: 716 AADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIK 775
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC------KGGDYETALGFCKE 346
G+ + + A K + M +GL P+ + Y +V + +G Y L C+E
Sbjct: 776 GWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCRE 833
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 5/171 (2%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+D++ V F PK P + +I + + D A + M + I+PNA
Sbjct: 260 EDWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFV 314
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F +LV + + M+ G++ + Y++ I K+ A L E
Sbjct: 315 FTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAK 374
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
+ N + YS+ I+ C+ GN + A++ M G+ Y +M++
Sbjct: 375 TNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMH 425
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/263 (18%), Positives = 105/263 (39%), Gaps = 1/263 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ Y + HA TF+ M + + F +L+ A +A+D + E K G
Sbjct: 284 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEM-KAEG 342
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ + TY+ +I F + +D+ SA ++ E N + ++ + +
Sbjct: 343 IELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAE 402
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ ME G+ + + Y+ +H ++ + + + + P+ ++Y I +
Sbjct: 403 ELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLY 462
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G +A + M +SG+ N+ Y ++ D+ A +E + G P+
Sbjct: 463 VKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDR 522
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
L+ + A ++
Sbjct: 523 AIYNLLIEAFCKMGNMDRAIRIL 545
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ FG ++ + K + M G++ ++ +H+ R A +
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+EM ++G++ VTYS I GF K + + A ++ + N +Y +++ C
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393
Query: 333 KGGDYETA 340
+ G+ + A
Sbjct: 394 QSGNMDRA 401
>gi|326517739|dbj|BAK03788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 430
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 184/402 (45%), Gaps = 35/402 (8%)
Query: 26 SILSSGDKTPLTSKDKTRAALTL--------LKSESNPEKILEICRAAALTPESH---LD 74
S L+ D +P ++ RAA+ +++E++P+++ + +A +P+ H
Sbjct: 26 SALADVDPSPASAPAPGRAAVRASIIDLQLAVRAETDPDRVHSLVASALSSPDYHRLHTS 85
Query: 75 RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
R FS+A ++L + + L++L + + A ++ L+ + AVR F
Sbjct: 86 RALFSLAASRLDRLRRPDLAASLLDQLLASAPV-SPGLLARALSLFPG---PDDAVRAFS 141
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
R V L L + ++K F + G+ P ++N ++ +S
Sbjct: 142 S-SAPAARSDVSLSALLSALLRAGR-IDDLKSTFKSAESSLGVAPGSASHNVLLHTLVKS 199
Query: 195 SDSSSAYSILAEMDRKSIK----PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
SD +A +L EM +K K P+ S+ L+AGF +++ E+ K+L+ + ++
Sbjct: 200 SDLPAARKLLNEMAKKKFKHRPPPDIISYNTLLAGFSEQDDVEEFEKLLKEINENKLEPN 259
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN R+H + + + + LLD M SKG+ PN VTY+ + G+CK+GN A + ++
Sbjct: 260 VVTYNCRMHWFARKGETFKGEELLDVMESKGVLPNYVTYNALVQGYCKEGNVGAAMRVFK 319
Query: 311 IM---------SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
M S+ G+S +S Y + + + + AL C A P+F +K
Sbjct: 320 RMKVMKRREGRSDLGVSVHSQTYVLLFRTLVEKERLDDALWLCNSCFAMKAAPSFEAVKG 379
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVD---TWNEIEAGL 400
LV GL + +EAK ++ K F D +W +I L
Sbjct: 380 LVEGLVKGGRSAEAKAVVA--KMNFLVKGDAKVSWEKIAGEL 419
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 9/238 (3%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P + YN +I +C D +L EM+ P ++G+L+
Sbjct: 1000 LIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLG 1059
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+ E + + M + G V +YN I +LC R +A +L +M + G P+ +
Sbjct: 1060 KKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDII 1119
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I G C +G+ +A+ F R L+PN Y +++ C G+ A E
Sbjct: 1120 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1179
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-----NVDTWNEIEAGL 400
+ +G P+ T +L+ GL A KVSEA +V+EK T+ +V+ +N + +GL
Sbjct: 1180 MGRGHTPDVVTFGALIHGLVVAGKVSEAL----IVREKMTERQVFPDVNIYNVLISGL 1233
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 138/333 (41%), Gaps = 9/333 (2%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL +S + IL+ A+ P D + F+ I L + +L E R
Sbjct: 1092 ALCNCRSATQAMVILKQMFASGCDP----DIITFNTLITGLCHEGHVRKAEHFLRE-AIR 1146
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRT--FKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+L + +++ +++G E V + EM V F AL+ L +A
Sbjct: 1147 RELNPNQL-SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVS 1205
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + E + PD++ YN +I C+ +A +IL EM K+++P+ + L
Sbjct: 1206 EAL-IVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF + E D K+ + ME G+ + N I C+ +EA + M G
Sbjct: 1265 IDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1324
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ TY+ I G+ K GN A ++ M PN Y +++ CK GD ++A G
Sbjct: 1325 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 1384
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
A+ PN T L+ L KV A
Sbjct: 1385 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1417
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 1/251 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ + ++ + +L+ L D +++ +F+E K G P++ YN VI A C
Sbjct: 1038 EMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR-GFSPNVQIYNSVIDALCNC 1096
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ A IL +M P+ +F L+ G E L+ R + Y
Sbjct: 1097 RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1156
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
IH C + A LL EM+ +G P+ VT+ I+G G EA M+
Sbjct: 1157 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1216
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+ P+ ++Y ++ +CK A +E + K P+ +L+ G + + +
Sbjct: 1217 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 1276
Query: 375 AKELIGLVKEK 385
A+++ ++ K
Sbjct: 1277 ARKIFEFMEHK 1287
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 128/348 (36%), Gaps = 37/348 (10%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
IN L + I E++ R N + + I A+ K+M
Sbjct: 1055 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1114
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ FN L+ L ++ + F+ + P+ +Y +I FC + A
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEH-FLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1173
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM + P+ +FGAL+ G K + V + M + V++YNV I L
Sbjct: 1174 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF------------------------- 296
CK R AK +L+EML K ++P+ Y+ I GF
Sbjct: 1234 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDI 1293
Query: 297 ----------CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
C+ G EA M G P+ Y T++ K G+ AL + +
Sbjct: 1294 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1353
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
I + PN T SL+ G A+ L + E + NV T+
Sbjct: 1354 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 1401
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ YG P++ NR++K E A + EM K + S LV G E +
Sbjct: 935 EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRV 994
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ K+++ G V YNV I C+ LL EM + G P VTY
Sbjct: 995 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSL 1054
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K G+ E+ + M G SPN +Y +++ +C A+ K+ A G
Sbjct: 1055 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1114
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
P+ T +L+TGL V +A+ +
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFL 1141
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G PD TY VI + + + + A L +M ++ KPN ++ +L+ G+ K
Sbjct: 1320 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 1379
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + M+ + V Y + I SL K K A + ML PN VT +
Sbjct: 1380 DSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 1439
Query: 293 IYGF-----------CKDGNFEEAKK-----FYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+ G C + + K F +++ + G P +S Y +++ +C+
Sbjct: 1440 VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNM 1498
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
AL F KG+VPN T SL+ G K
Sbjct: 1499 LREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL-ALTIAKDYKEVKRVFIEFPKTY 175
II Y + E A++ + + ++ V + LL + + + ++E Y
Sbjct: 162 IIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEV-LDY 220
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P++ +N ++ FC+ D +A + E+ R+ ++P+ SF L++G+ + + E+
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +ME + V Y+ I+ LCK + EA L DEM G+ PN VT++ I G
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + A + + IM + G+ P+ Y ++ +C+ GD + A E I G+ P+
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ G + A E+
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEI 423
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
H + E+ ++ +V FN L+ D + VF E + G++P + ++N +
Sbjct: 209 HCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRR-GLRPSVVSFNTL 267
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I +C S + + + + M+ + I P+ ++ AL+ G KE + E+ N + M G+
Sbjct: 268 ISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGL 327
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ I CK K A + M +G++P+ +TY+ I G C+DG+ +EA+K
Sbjct: 328 VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARK 387
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M +G P+ + T++ CK GD ++AL + +G + +L++GL
Sbjct: 388 LLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLC 447
Query: 368 GASKVSEAKELI 379
+V +A+ ++
Sbjct: 448 RDGRVRDAERML 459
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 39/322 (12%)
Query: 116 SIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I+++G + + +A F E+ LR SV +FN L+ +K+ +E V +
Sbjct: 230 NILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEE-GFVLKSVME 288
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ I PD+ TY+ +I C+ S A + EM + PN +F L+ G K K +
Sbjct: 289 SERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKID 348
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ ++M+ G++ + YN I+ LC+ EA+ LL+EM+ G KP+ +T++ +
Sbjct: 349 LALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLM 408
Query: 294 YGFCKDGNFE-----------------------------------EAKKFYRIMSNSGLS 318
G CKDG+ + +A++ + M ++G
Sbjct: 409 DGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHK 468
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y ++ CK GD + KE G VP T +L+ G ++ AK L
Sbjct: 469 PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKML 528
Query: 379 I-GLVKEKFTKNVDTWNEIEAG 399
+ ++ + N T+N + G
Sbjct: 529 LHAMLNMEVVPNDITFNILLDG 550
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 125/275 (45%), Gaps = 12/275 (4%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+R F+ M + +R + +NAL+ L D KE +++ E G KPD T+ ++
Sbjct: 350 ALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN-GFKPDKITFTTLM 408
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ D SA I M + I+ + +F AL++G ++ + D ++L+ M G K
Sbjct: 409 DGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHK 468
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y + I CK LL EM G P VTY+ + GFCK G + AK
Sbjct: 469 PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKML 528
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M N + PN + ++ CK G +++ F + KG V ++ + +LV
Sbjct: 529 LHAMLNMEVVPNDITFNILLDGHCKHG---SSVDFKIFNGEKGLVSDYASYTALVNESIK 585
Query: 369 ASK-----VSEAKELIGLVKEKFTKNVDTWNEIEA 398
SK V E IG+ ++ +N D + I++
Sbjct: 586 ISKDQLKSVLECPTHIGI---QYRQNTDMCSCIQS 617
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG V ++N+ +H CK+ A+ + DE+ +G++P+ V+++ I G+C+ N EE
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEE 279
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+M + +SP+ Y ++ +CK E A G E G VPN T +L+
Sbjct: 280 GFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLID 339
Query: 365 GLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
G K+ A ++K++ + ++ T+N + GL
Sbjct: 340 GQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGL 376
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + V+ KEM L+ ++ +++++L L + E ++V E K G+ P
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKR-GVFP 213
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D Y +I FC+ ++ +AY + +EM+ + I P++ +F AL+ G K + +K+
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G + Y I CKL + +A L ++M+ G+ PN VTY+ G CK
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + A + M GL N S Y T+V +CK G+ A+ +E G P+ T
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+L+ ++ +A+EL+ ++ V T+N + GL
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 2/305 (0%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ L E+ R + + I + + T+ A + F EM+ ++ AF+AL+ L
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + E ++F E K G +PD TY +I +C+ + A+ + +M + + PN
Sbjct: 261 SGSGKVVEADKLFNEMIKK-GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPN 319
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ AL G K + + N++L M R G++ +S YN ++ LCK +A L++
Sbjct: 320 VVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME 379
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM G+ P+++TY+ + + K G +A++ R M + GL P + ++ +C G
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
E K + KG +PN T S++ + + + E+ G+ + + +T+N
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYN 499
Query: 395 EIEAG 399
+ G
Sbjct: 500 ILIKG 504
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 7/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRP-DLQNERFHAHSIILYGQANMTEHAVRT 132
D F + L EA N ++ ++L L + + L + +M ++
Sbjct: 38 DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI--EFPKTYGIKPDLDTYNRVIKA 190
F E + + + ++N L+ +L +E + + EF G PD+ +Y +I
Sbjct: 98 FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFK---GCIPDVVSYTTIIDG 154
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C + ++ EM K +KPN ++ +++ K K + KVL+ M + G+
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+Y I CKL A L EM ++ + P+S+ +S I G G EA K +
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFN 274
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G P+ Y ++ CK G+ + A + + G PN T +L GL +
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
++ A EL+ + ++ N+ T+N I GL
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGL 365
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 1/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +AFS I LS + + E+ + +E + I Y + + A
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLH 308
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + L +V + AL L + + + E + G++ ++ TYN ++ C+
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK-GLQLNISTYNTIVNGLCK 367
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A ++ EM + P+ ++ L+ +YK + ++L+ M G++ V
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NV ++ LC K + + LL ML KG+ PN+ TY+ + +C N + + YR M
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G+ P+S+ Y ++ CK + + A KE + K + ++ +L+ G K+
Sbjct: 488 AQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547
Query: 374 EAKEL 378
EA++L
Sbjct: 548 EARQL 552
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
AV+ +EM E L + L+ A + + + + E G++P + T+N +
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR-GLQPTVVTFNVL 431
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ C S +L M K I PNA+++ +++ + ++ + M G+
Sbjct: 432 MNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGV 491
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ YN+ I CK R EA L EM+ K + +Y+ I GF K EA++
Sbjct: 492 VPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQ 551
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ M GL ++ +Y V + G+ ET L C E+I K
Sbjct: 552 LFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---TYGIKPDLDTY 184
A+ F +M + + S+ FN LL A+ K Y V I K GI+ DL T+
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD----VVISLGKKMEVLGIRNDLYTF 123
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI FC S A SIL +M + +P+ + G+LV GF + + D ++ M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K + YN I SLCK ++ +A E+ KG++PN VTY+ + G C + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M ++PN Y ++ K G A +E + P+ T SL+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 365 GLAGASKVSEAKELIGLVKEK 385
GL ++ EA ++ L+ K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + N AV +M E + + A+NA++ +L K + F E + GI+P
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY ++ C SS S A +L++M +K I PN ++ AL+ F K K + ++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + + Y+ I+ LC + EA + D M+SKG + V+Y+ I GFCK
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K +R MS GL N+ Y T++ + GD + A F + G P+ T
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 360 KSLVTGLAGASKVSEA 375
L+ GL ++ +A
Sbjct: 404 NILLGGLCDNGELEKA 419
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
DR+ +N N + ++ E+ +PD+ S+ + N A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN---DAF 210
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FKE++ +R +V + AL+ L + + + R+ + K I P++ TY+ ++ A
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 269
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
F ++ A + EM R SI P+ ++ +L+ G ++ ++ N++ +M G +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I+ CK ++ + L EM +G+ N+VTY+ I GF + G+ ++A++F+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SP+ Y ++ +C G+ E AL ++ + + T +++ G+
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
KV EA L + K K ++ T+ + +GL
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A + ++M + P+ F L++ K +KY+ V + + ME G+++ + +N+
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I+ C + + A ++L +ML G +P+ VT + GFC+ +A M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ +CK A F KE KG PN T +LV GL +S+ S+A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 378 LIG-LVKEKFTKNVDTWNEI 396
L+ ++K+K T NV T++ +
Sbjct: 247 LLSDMIKKKITPNVITYSAL 266
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ +N L ++ ++ ++ L ++ + N ++ + + + A F+E
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +++L+ L + E ++F + + G D+ +YN +I FC++
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ EM ++ + N ++ L+ GF++ + + M+ +G+ + YN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + LC + +A + ++M + M + VTY+ I G CK G EEA + +S
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 316 GLSPNSSVYFTMVYFMCKGG 335
GL P+ Y TM+ +C G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 11/241 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F M V ++N L+ AK ++ ++F E + G+ + TYN
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNT 370
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ F ++ D A ++MD I P+ ++ L+ G + E + + M++
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M + Y I +CK K EA +L + KG+KP+ VTY+ + G C G E +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y M GL N GD + K+ ++ G+ P+ +K + +G+
Sbjct: 491 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPSL--LKDIKSGV 540
Query: 367 A 367
Sbjct: 541 C 541
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 155/353 (43%), Gaps = 27/353 (7%)
Query: 76 LAFSIAINKLSEANY---------FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
LA + +NK++ AN+ F+ Q ++E+ + + + ++ I A
Sbjct: 414 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 473
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F+EM + V + L+ + A ++ + +F E ++ G P + TY
Sbjct: 474 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTVVTYTA 532
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE-------EKYE------ 233
+I A+ ++ A I M +PN ++GALV G K E Y
Sbjct: 533 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 592
Query: 234 ---DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
D + +R+ + V Y + LCK K A LLD MLS G +PN + Y
Sbjct: 593 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I GFCK G + A++ + M+ G P+ Y +++ M K G + A+ + +
Sbjct: 653 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 712
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
PN T +++ GL + +A +L+ L++EK + NV T+ + GL Q
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 22/293 (7%)
Query: 123 ANMTEHAVRTFKEMDEHKL---RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
A + R KEM E R +VG F A + K+ + ++ + K
Sbjct: 222 AGQVDLGFRVQKEMSESGFCMDRFTVGCF-----AHALCKEGRWADA--LDMIEREDFKL 274
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D +I E+S A S L M S PN ++ L++GF K+++ +++
Sbjct: 275 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 334
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
MM G S++N +HS C + A A LL+ M + G P V Y+ FI C
Sbjct: 335 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 394
Query: 300 GN------FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+ A+K Y M + N +C G ++ A KE + KG+V
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454
Query: 354 PNFTTMKSLVTGLAGASKVSEA------KELIGLVKEKFTKNVDTWNEIEAGL 400
P+ +T ++T L A+KV +A +++G+ + +T + + +AGL
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 507
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TY ++ F + I+ M + PN S F +LV + E+ Y K+
Sbjct: 309 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 368
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAE------AKALLDEMLSKGMKPNSVTYSHF 292
L M G G +YN+ I S+C K A+ + EML+ N V ++F
Sbjct: 369 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 428
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
C G F++A + + M G P++S Y ++ F+C E A +E G
Sbjct: 429 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 488
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ T L+ A + +A+ L
Sbjct: 489 TPDVYTYTILIDSFCKAGLIEQAQWL 514
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 5/361 (1%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
R LLK+E +P+ L + +A+ P F + + +LS+ +++ +E +K
Sbjct: 11 RQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIK 70
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDY 161
T+ E + Y ++ M A+ F++M+E + + ++NALL A I +
Sbjct: 71 TQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAF-IEANL 129
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
E F+ + +T GI P+L TYN +IK + A +L M K +KP+ S+G
Sbjct: 130 LEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGT 189
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ G K +V M G+ V YN+ I K + K + E L KG
Sbjct: 190 VINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIW-ERLVKG 248
Query: 282 --MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+ PN VTY+ I G CK G F+E+ + + M + + Y +++ +C G+ +
Sbjct: 249 SCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDG 308
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
A+ KE + + V + T +L+ G A K+ E+ EL ++ ++ NV ++N G
Sbjct: 309 AVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRG 368
Query: 400 L 400
L
Sbjct: 369 L 369
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 146/332 (43%), Gaps = 3/332 (0%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
E +D +S I L + +G + +E+ R + + + + + +A + +
Sbjct: 285 ECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKES 344
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ M + H+V ++N + L + +E V+ E + G D TY +I
Sbjct: 345 FELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVW-ELLRRRGSGADSTTYGVLIH 402
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C++ + A IL E K +A ++ ++V G K+ + ++ ++ M++YG +
Sbjct: 403 GLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCEL 462
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ N I+ + K EA EM +KG P V+Y+ I G CK F +A F
Sbjct: 463 SPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFV 522
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ M P+ Y ++ +C+G + AL ++ + KG P+ T L+ GL A
Sbjct: 523 KEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSA 582
Query: 370 SKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
K+ +A L +K+ N+ T N + GL
Sbjct: 583 GKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL 614
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G K D Y+ ++ + A I+ +MD+ + + L+ GF + K
Sbjct: 421 KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL 480
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ + ME G V YN I+ LCK + ++A + + EML K KP+ +TYS
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G C+ + A +R + GL P+ +++ +++ +C G E AL
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+PN T +L+ GL A + A + + K F ++ ++N GL
Sbjct: 601 LPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGL 649
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 5/295 (1%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEH 128
S D + + I+ L + + N + L+E K D + + F SI+ L Q + E
Sbjct: 390 SGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD-KLDAFAYSSIVDGLSKQGRVDE- 447
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +MD++ S N L+ A +E F E +T G P + +YN +I
Sbjct: 448 ALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLI 506
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ S AYS + EM K KP+ ++ L+ G + +K + + + + G++
Sbjct: 507 NGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE 566
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V+M+N+ +H LC K +A L M PN VT++ + G K E A
Sbjct: 567 PDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVI 626
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ M +G P+ Y + +C G + +++ G +P T LV
Sbjct: 627 WACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 4/264 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H + G N A++ KE + + A+++++ L+ E + + K
Sbjct: 402 HGLCKNGHLN---KALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDK- 457
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG + N +I F +S A EM+ K P S+ L+ G K E++ D
Sbjct: 458 YGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSD 517
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ M K + Y++ + LC+ +K A L ++L KG++P+ ++ ++
Sbjct: 518 AYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMH 577
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C G E+A Y M S PN + T++ + K + E A G+ P
Sbjct: 578 GLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637
Query: 355 NFTTMKSLVTGLAGASKVSEAKEL 378
+ + + GL ++S+ L
Sbjct: 638 DIISYNITLKGLCSCGRISDGIAL 661
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 73 LDRLAFSIAINKLSEANYFN---GISQYLEE--LKTRPDLQNERFHAHSIILYGQANMTE 127
LD A+S ++ LS+ + GI +++ + P + N + + +A+ E
Sbjct: 427 LDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLING-----FVRASKLE 481
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ F+EM+ +V ++N L+ L A+ + + F++ KPD+ TY+ +
Sbjct: 482 EAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS-FVKEMLEKDWKPDMITYSLL 540
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ C+ A ++ ++ K ++P+ + L+ G K ED + M++
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ +N + L K R+C A + M G +P+ ++Y+ + G C G +
Sbjct: 601 LPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIA 660
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+ +G+ P S ++ +V + K G ++
Sbjct: 661 LFDDALKNGILPTSITWYILVRAVLKLGPLDS 692
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 5/324 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A ++ + E+ + + NE + + + M E A++
Sbjct: 256 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVL 315
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M +H + N ++ A+ + F+ YG PD +Y V++ C
Sbjct: 316 QQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRGLCR 374
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM RK+ PN +F + ++ E K++++M YG G+
Sbjct: 375 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 434
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN +H C + A L + + +PN++TY+ + G C + A + M
Sbjct: 435 YNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMI 491
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
N+ + +V F C+ G E A+ + + G PN T +L+ G+
Sbjct: 492 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 551
Query: 374 EAKELI-GLVKEKFTKNVDTWNEI 396
EA EL+ GLV + + + T++ +
Sbjct: 552 EALELLHGLVSKGVSLDTITYSSV 575
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + TY +++A C+SS A ++L EM K PN ++ ++ G +E + +D
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L + YG + + Y + LC R+ + K L EM+ K PN VT+ +
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + + MS G +PN+++ ++ +CK G + A F G P+
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + AKEL+ +V++ N T+N
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 401
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 34/300 (11%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM ++ +N ++ + + K + +YG +PD+ +Y V
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL-SSYGFQPDIVSYTTV 263
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + + AEM K PN +F LV F + E +VLQ M ++G
Sbjct: 264 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 323
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
++ N+ I+++CK + +A L+ M G P++++Y+ + G C+ G +E AK+
Sbjct: 324 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 383
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL-----------------------GFC 344
M PN + T + +C+ G E A+ GFC
Sbjct: 384 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 443
Query: 345 KESIAKGWV---------PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ + PN T +L+TGL A ++ A EL+ ++++ N T+N
Sbjct: 444 VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFN 503
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A + + L E+ + NE I + Q + E A++
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 420
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M E+ + +NAL+ + +F P +P+ TY ++ C
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP----CEPNTITYTTLLTGLCH 476
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGF----YKEEKYEDVNKVLQMMERYGMKS 249
+ +A +LAEM +K NA +F LV+ F + EE E VN QMME +G
Sbjct: 477 AERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVN---QMME-HGCTP 532
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ +N + + K EA LL ++SKG+ +++TYS + ++ EEA +
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ + G+ P +Y +++ +CK + + A+ F ++ G +PN +T L+ GLA
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652
Query: 370 SKVSEAK 376
+ EA+
Sbjct: 653 GLLKEAR 659
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 88/186 (47%)
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+++ S+ S + M ++ +P+ ++ L+ K + + VL M G +
Sbjct: 165 TAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVT 224
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV I+ +C+ + +AK +L+ + S G +P+ V+Y+ + G C +++ K + M
Sbjct: 225 YNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 284
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ PN + +V F C+GG E A+ ++ G PN T ++ + +V
Sbjct: 285 DKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 344
Query: 374 EAKELI 379
+A + +
Sbjct: 345 DAYDFL 350
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
ML +G +P+ VTY+ + CK F EA M G +PN Y ++ MC+ G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ A + G+ P+ + +++ GL A + + K L +V +K N T++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 42/207 (20%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ +L G A + A EM + + FN +L++ K + E +
Sbjct: 467 YTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFN-VLVSFFCQKGFVEEAMELVNQM 525
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+G P+L T+N ++ + +S A +L + K + + ++ ++V +E++
Sbjct: 526 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 585
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA------------------------ 268
E+ ++L ++ GM+ V MYN + +LCK +C
Sbjct: 586 EEAIQMLHAVQDMGMRPKVGMYNKILFALCK--RCETDQAIDFFAYMVSNGCMPNESTYI 643
Query: 269 -------------EAKALLDEMLSKGM 282
EA+ +L E+ +KG+
Sbjct: 644 ILIEGLAHEGLLKEARYVLSELYAKGV 670
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 34/210 (16%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+ + ++ + L A + ++ L E+ + N + + Q E A+
Sbjct: 463 NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 522
Query: 134 KEMDEHKLRHSVGAFNALLLALT-------------------IAKD---YKEVKRVFIEF 171
+M EH ++ FN LL +T ++ D Y V V
Sbjct: 523 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 582
Query: 172 PKT------------YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+T G++P + YN+++ A C+ ++ A A M PN S++
Sbjct: 583 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 642
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
L+ G E ++ VL + G+ S
Sbjct: 643 IILIEGLAHEGLLKEARYVLSELYAKGVLS 672
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 5/304 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D +SI + L + NG + E+ + N + SI+L G + E A
Sbjct: 315 DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINN--YTGSILLNGLCKQGKVEKAEE 372
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
K+ E+ L +N + D + + IE +++G++P+ T+N +I F
Sbjct: 373 ILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAI-LTIERMESFGLRPNSITFNSLIDKF 431
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A + +M K + P+ ++ L+ G+ K ++ ++L+ ME G+K V
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I+ LCK K EA+ +L +M+ +G+ PN+ Y+ I G C G ++A +F+
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M S +SP Y ++ +CK G A F + + G P+ T SL++G A A
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGN 611
Query: 372 VSEA 375
VS+
Sbjct: 612 VSKC 615
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + +R +V +N L+ L K ++ +++F E + + TYN +I +C+
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNI-NLVGSIVTYNTLIDGYCKVG 260
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A+ + M KS+ PN +F +L++G K K ++ +L+ ME G Y+
Sbjct: 261 ELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYS 320
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ L + A L ++ KG++ N+ T S + G CK G E+A++ + + +
Sbjct: 321 ILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTEN 380
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL + +Y T V C+ GD A+ + + G PN T SL+ ++ +A
Sbjct: 381 GLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKA 440
Query: 376 KELIGLVKEK-FTKNVDTWNEIEAG 399
+E + + EK T +V+T+N + G
Sbjct: 441 EEWVKKMAEKGVTPSVETYNTLIDG 465
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 2/279 (0%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L ++ R L N + + I + A+R F EM ++ ++ +N L+ L
Sbjct: 514 LRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E + + + G PD+ TYN +I + + + S + M IKP
Sbjct: 574 KGKLTEAEDFLTQITSS-GHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L++G KE E V K+ M + + +YN IH ++ +A +L M
Sbjct: 633 TYHPLISGCSKE-GIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGM 691
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L +G+ P+ +TY+ I G ++G K M L+P + Y +V C D+
Sbjct: 692 LDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDF 751
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
A + +E + ++PN + L GL ++ E +
Sbjct: 752 SGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQ 790
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 36/301 (11%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K+M E + SV +N L+ + ++ +E + G+KP++ +Y +I C+
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI-LEQMEEIGVKPNVVSYGSLINCLCK 503
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A +L +M + + PNA + L+ G K +D + M R + +
Sbjct: 504 DGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVT 563
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV I LCK K EA+ L ++ S G P+ +TY+ I G+ GN + Y M
Sbjct: 564 YNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Query: 314 NSG----------------------------------LSPNSSVYFTMVYFMCKGGDYET 339
N G L P+ VY M++ + G+ +
Sbjct: 624 NLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQK 683
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEA 398
A + + +G P+ T SL+ G K+S K+L+ +K K DT++ +
Sbjct: 684 AYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Query: 399 G 399
G
Sbjct: 744 G 744
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E+++ V + +E G ++ MY I + KL+ LD M +G++PN
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFI 213
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I G C++ +A+K + M N L + Y T++ CK G+ + A +
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
K PN T SL++GL K+ EA+ L+
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLL 304
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M + G++ V +YNV I LC+ ++ +A+ + DEM + + + VTY+ I G+CK
Sbjct: 199 LDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCK 258
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G + A K M ++PN + +++ +CK + A KE G++P+ T
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
L GL + A EL EK
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEK 345
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD YN +I + E ++ AYS+ M + I P+ ++ +L+ G ++E K ++ +
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+ + Y++ + C L+ + A EM+ PN+ + G +
Sbjct: 723 VNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQ 782
Query: 299 DGNFEEAKKFYRIMSNSGL 317
+G +E + M+ G+
Sbjct: 783 EGRLQEVQVICSEMNVKGI 801
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 17/326 (5%)
Query: 68 TPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE 127
T ++ L+R+A + LS + N + + ++ PD N + + +I Y + MT+
Sbjct: 93 TAQNLLERIAVR---DYLSSPSVLNAVVRIHDD----PD-SNSQILSWLVIFYANSRMTQ 144
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A++ F+ M H + + A LL +L A+ V +V+ + + G+ P++ +N +
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV-GVVPNIHIFNVL 203
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A C+S D A +L EM+ + I P+ ++ L++ + K+ + + + MER G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ YN I+ C+ + EA L E+ G PN VTY+ I G+C+ + EEA +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG-- 365
+M GL P Y +++ +C+ G + A E + P+ T +L+
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 366 ----LAGASKVSEAKELIGLVKEKFT 387
+ A KV + GL ++FT
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFT 407
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 15/328 (4%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSII-LY 120
+ P H+ F++ I+ ++ Q L E+++R PDL F +++I LY
Sbjct: 191 VGVVPNIHI----FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDL----FTYNTLISLY 242
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+ M A+ M+ + + +N+L+ +E R+F E G P+
Sbjct: 243 CKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN---GATPN 299
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY +I +C +D A + M+ + + P ++ +++ +E K +D N++L
Sbjct: 300 HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 359
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M ++ N I++ CK+ A + +ML G+KP+ T+ I+GFCK
Sbjct: 360 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLH 419
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ AK+F M ++G SP+ S Y +V + E + E KG + + +
Sbjct: 420 EVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYR 479
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTK 388
+L+ L K+ A+ + L++ K K
Sbjct: 480 ALIRRLCKIDKIESAERIFTLMQGKGMK 507
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ S + A + M KP+ + L+ K V KV + M R G+
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ ++NV IH+ CK +A+ LL+EM S+ + P+ TY+ I +CK G EA
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SP+ Y +++Y C+ G AL +E G PN T +L+ G +
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRVN 314
Query: 371 KVSEAKELIGLVK-EKFTKNVDTWNEI 396
+ EA L +++ E V T+N I
Sbjct: 315 DLEEALRLREVMEVEGLHPGVVTYNSI 341
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 99 EELKTRPDLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
E L+ R ++ E H ++ Y + + A R EM E K+ N L
Sbjct: 318 EALRLREVMEVEGLHP-GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 376
Query: 152 LLALTIAKDY---KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
+ A D +VK+ +E G+KPD T+ +I FC+ + SA L EM
Sbjct: 377 INAYCKIGDMGSAMKVKKKMLE----AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 432
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
P+ S++ LV +Y ++ E V ++ + R G+ +S+Y I LCK+ K
Sbjct: 433 DAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 492
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
A+ + M KGMK +SV Y+ Y + K G
Sbjct: 493 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAG 524
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 3/232 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAV 130
H + ++ + KL E ++ L E+ R ++ + +++I Y + A+
Sbjct: 332 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK-VEPDNVTCNTLINAYCKIGDMGSAM 390
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ K+M E L+ F AL+ + K E G P TY+ ++ +
Sbjct: 391 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA-GFSPSYSTYSWLVDS 449
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + + + + E+ RK + + S + AL+ K +K E ++ +M+ GMK
Sbjct: 450 YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 509
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+Y ++ K K A +LDEM + + Y F + DG+
Sbjct: 510 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 148/312 (47%), Gaps = 2/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I LS +Y +++ R + +E ++ I Y + E A +
Sbjct: 524 DLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL 583
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M L+ + + LL + D+++V + + G KPD Y VI+
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS-GDKPDNHIYGIVIRNLSR 642
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + A+ +L E+++ + P+ + +L++G K E +L M + G++ G+
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I C+ + A+ + D +L+KG+ PN VTY+ I G CK+G+ +A Y+ M
Sbjct: 703 YNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML 762
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G++P++ VY + D E AL +E +G+ + + +LV G ++
Sbjct: 763 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQ 821
Query: 374 EAKELIGLVKEK 385
E ++L+ ++ ++
Sbjct: 822 ETEKLLHVMMDR 833
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 11/340 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++L R + + P ++ + I IN L + LEE+ + N +A
Sbjct: 441 ELLNEMRNSGILPNAY----TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
II + + A + + M + + + +N+L+ L+ +E + + + K G
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKR-G 555
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD TY+ +I +C++ + A +L +M +KPNA ++ L+ G++K +E V+
Sbjct: 556 LVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVS 615
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+LQ M G K +Y + I +L + A +L E+ G+ P+ YS I G
Sbjct: 616 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 675
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK + E+A M+ GL P Y ++ C+ GD A +AKG +PN
Sbjct: 676 CKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNC 735
Query: 357 TTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T +L+ G +++A +L G+ + F NV
Sbjct: 736 VTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+EM + +N ++ L + +E F E YG+ PD TY
Sbjct: 262 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FKEEMVDYGLSPDAFTYGA 320
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ A ++L EM +KPN + LV GF KE K + +L M G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG----FCKDGNF 302
++ MY+ I LCK+ + A LL+EM+ G +P++ TY + G + KDG F
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E M NSG+ PN+ Y M+ +C+ G+ + A +E I++G PN L
Sbjct: 441 E----LLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496
Query: 363 VTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
+ G + +S A E L + K ++ +N + GL
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%)
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
F + GI PD+ TY+ ++A C++ D +A + EM R+ N ++ +++G +
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
E+ + M YG+ Y ++ LCK + EAKALLDEM G+KPN V Y+
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ GF K+G EA M ++G+ PN +Y ++ +CK G A E I
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414
Query: 351 GWVPNFTTMKSLVTG 365
G P+ T L+ G
Sbjct: 415 GHRPDTFTYHPLMQG 429
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 7/320 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S + +A F+ + EE++ R NE + I ++ E A
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM ++ L + AL+ L KE K + E G+KP++ Y ++ F +
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM-SCSGLKPNVVVYATLVDGFMK 362
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++ A+ IL EM ++PN + L+ G K + +K+L M + G +
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ + + A LL+EM + G+ PN+ TY I G C++G +EA M
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL PN+ +Y ++ K G A + +P+ SL+ GL+ ++
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIE 542
Query: 374 EAKELI------GLVKEKFT 387
EA+E GLV ++FT
Sbjct: 543 EAEEYYAQVQKRGLVPDEFT 562
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P N ++K + + + M+ I P+ ++ + K ++
Sbjct: 205 GLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAA 264
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV + M R YNV I LC+ EA +EM+ G+ P++ TY + G
Sbjct: 265 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 324
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G +EAK MS SGL PN VY T+V K G A E I+ G PN
Sbjct: 325 LCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPN 384
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+L+ GL ++ A +L+ ++K + T++ + G
Sbjct: 385 KIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQG 429
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%)
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+A ++ M + P L+ + + E V K+ ME G+ V Y+ +
Sbjct: 193 TAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFL 252
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ CK R AK + +EM + N VTY+ I G C+ G EEA F M + GLS
Sbjct: 253 EAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS 312
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P++ Y ++ +CKGG + A E G PN +LV G K +EA ++
Sbjct: 313 PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDI 372
Query: 379 I 379
+
Sbjct: 373 L 373
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHA 114
IL+ + P++H+ + I I LS + L E++ PDL H
Sbjct: 617 ILQSMLGSGDKPDNHI----YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL-----HI 667
Query: 115 HSIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++ G M E AV EM + L + +NAL+ + D + VF
Sbjct: 668 YSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI- 726
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ P+ TY +I C++ D + A+ + +M + I P+A + L G
Sbjct: 727 LAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADL 786
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + + M G + VS+++ + CK + E + LL M+ + + PN+ T +
Sbjct: 787 EQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENV 845
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
I F K G EA + + + S +S+ F++++
Sbjct: 846 ITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLF 882
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 113 HAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H + I++ ++ E A E++++ L + +++L+ L D ++ + E
Sbjct: 631 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDE 690
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++P + YN +I FC S D S A ++ + K + PN ++ AL+ G K
Sbjct: 691 MAKE-GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNG 749
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
D + + M G+ +YNV +A L +EM ++G S+ +S
Sbjct: 750 DITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL-FS 808
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ GFCK G +E +K +M + + PN+ ++ K G
Sbjct: 809 TLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAG 853
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 8/308 (2%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ + LE+ PD+ +++++ G E + +D + V +N +L
Sbjct: 167 VMEILEDSGAVPDVI-----TYNVLISGYCKTGEIG-SALQLLDRMSVSPDVVTYNTILR 220
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L + KE V ++ PD+ TY +I+A C+ S A +L EM K K
Sbjct: 221 TLCDSGKLKEAMEV-LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCK 279
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ ++ L+ G KE + ++ + L M YG + V +N+ + S+C + +A+
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKF 339
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM+ KG P+ VT++ I C+ G A M G +PNS Y +++ +CK
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV-DT 392
E A+ + +++G P+ T +L+T L KV A E++ + K V T
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT 459
Query: 393 WNEIEAGL 400
+N + GL
Sbjct: 460 YNTVIDGL 467
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 150/347 (43%), Gaps = 9/347 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+++EI + P D + +++ I+ + Q L+ + PD+ +
Sbjct: 166 RVMEILEDSGAVP----DVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRT 221
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ G+ + A+ + + V + L+ A + ++ E + G
Sbjct: 222 LCDSGK---LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM-RDKG 277
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
KPD+ TYN +I C+ A L M +PN + ++ ++ D
Sbjct: 278 CKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAE 337
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K L M R G V +N+ I+ LC+ A +L++M G PNS++Y+ ++
Sbjct: 338 KFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHAL 397
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CKD E A ++ IM + G P+ Y T++ +CK G + A+ + +KG P
Sbjct: 398 CKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVL 457
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
T +++ GL+ K +A +L+ +K K K ++ T++ + GL +
Sbjct: 458 ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSR 504
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 15/342 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R P D + +++ IN + + + ++L + + N H+
Sbjct: 268 KLLDEMRDKGCKP----DVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN--VITHN 321
Query: 117 IILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
IIL + A + EM SV FN L+ L V + P+
Sbjct: 322 IILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ- 380
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G P+ +YN ++ A C+ A L M + P+ ++ L+ K+ K +
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 440
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L + G + YN I L K+ K +A LLDEM KG+KP+ +TYS +
Sbjct: 441 AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVG 500
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G ++G +EA F+ + G+ PN+ Y +++ +CK A+ F +A+G P
Sbjct: 501 GLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKP 560
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
T+ L+ GLA EA EL+ G+VK+ + V
Sbjct: 561 TETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 7/326 (2%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMT 126
E + D + ++I I + + + L+E++ +PD+ + I G+
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR---L 298
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+R M + + +V N +L ++ + + ++ E + G P + T+N
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPSVVTFNI 357
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C A +L +M + PN+ S+ L+ K++K E + L +M G
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN + +LCK K A +L+++ SKG P +TY+ I G K G ++A
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K M GL P+ Y T+V + + G + A+ F + G PN T S++ GL
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 537
Query: 367 AGASKVSEAKELIGLVKEKFTKNVDT 392
A + A + + + + K +T
Sbjct: 538 CKARQTVRAIDFLAYMVARGCKPTET 563
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E G PD+ +I+ C++ + A ++ ++ P+ ++ L++G+
Sbjct: 132 FLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYC 191
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC---KL------------RKC----- 267
K ++ LQ+++R + V YN + +LC KL R+C
Sbjct: 192 KT---GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVI 248
Query: 268 ---------------AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+A LLDEM KG KP+ VTY+ I G CK+G +EA +F M
Sbjct: 249 TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHM 308
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G PN + ++ MC G + A F E I KG P+ T L+ L +
Sbjct: 309 PSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLI 368
Query: 373 SEAKELI 379
A +++
Sbjct: 369 GRAIDVL 375
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 3/191 (1%)
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ + + + L +M + P+ + +L+ G K K +V++++E
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V YNV I CK + A LLD M + P+ VTY+ + C G +E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKE 230
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + P+ Y ++ CK A+ E KG P+ T L+
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290
Query: 365 GLAGASKVSEA 375
G+ ++ EA
Sbjct: 291 GICKEGRLDEA 301
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E L++M+ +G P+ + + I G CK G +A + I+ +SG P+ Y ++
Sbjct: 128 EGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLI 187
Query: 329 YFMCKGGDYETALGFC-KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
CK G+ +AL + S++ P+ T +++ L + K+ EA E++
Sbjct: 188 SGYCKTGEIGSALQLLDRMSVS----PDVVTYNTILRTLCDSGKLKEAMEVL 235
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RPDL + + G+ E F++M V +++ L+ LT A +E
Sbjct: 522 RPDLTLLNTYMDCVFKAGE---VEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARE 578
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F + G D YN V+ C+S AY +L EM K + P +++G++V
Sbjct: 579 TSNIFQAMSQQ-GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K ++ ++ + + + G++ V +Y+ I K+ + EA +L+EM+ KG+
Sbjct: 638 DGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 697
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN T++ + K +EA ++ M SPN+ Y ++ +C+ Y A F
Sbjct: 698 PNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 757
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+E +G +PN T ++++GLA +++A L E+F N
Sbjct: 758 WQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLF----ERFKTN 799
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 144/325 (44%), Gaps = 20/325 (6%)
Query: 74 DRLAFSIAINKLSEA-------NYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QAN 124
D ++SI I+ L++A N F +SQ L R A++ ++ G ++
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDAR---------AYNAVVDGLCKSG 609
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ A +EM + +V + +++ L E +F E K+ GI+ ++ Y
Sbjct: 610 KVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLF-EEAKSKGIELNVILY 668
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ +I F + AY IL EM +K + PN ++ +L+ K E+ ++ Q M+
Sbjct: 669 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKE 728
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
Y++ I+ LC+++K +A EM +G+ PN VTY+ I G K GN +
Sbjct: 729 MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITD 788
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + +G P+S+ + ++ M A +E+ +G N T SL+
Sbjct: 789 AYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLD 848
Query: 365 GLAGASKVSEAKELIGLVKEKFTKN 389
L ++ E ++G V + K+
Sbjct: 849 AL-NKTECLEQAAIVGAVLSEIAKS 872
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 4/282 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+P++ + + G+ N A + EM+ L ++ + N ++ L A +E
Sbjct: 382 KPNISTYNIIIDMLCMAGRVN---EAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
R+F E G P+ TY +I + AY + +M N + +L+
Sbjct: 439 AHRIF-ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F+ + ED +K+ + M R G + +++ N + + K + + +A+ ++M S G
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ +YS I+G K G E ++ MS G + ++ Y +V +CK G + A
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+E K P T S+V GLA ++ EA L K K
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 137/326 (42%), Gaps = 2/326 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L+ +I +++L +AN + E R N + I G+ + A R F++
Sbjct: 421 LSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEK 480
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + + +L+ + ++ +++ E + G +PDL N + ++
Sbjct: 481 MLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG-RPDLTLLNTYMDCVFKAG 539
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +I +M P+ S+ L+ G K + + + + Q M + G YN
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ LCK K +A +L+EM K + P TY + G K +EA + +
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ N +Y +++ K G + A +E + KG PN T SL+ L ++ EA
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719
Query: 376 KELIGLVKE-KFTKNVDTWNEIEAGL 400
+KE K + N T++ + GL
Sbjct: 720 LICFQSMKEMKCSPNTYTYSILINGL 745
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 146/331 (44%), Gaps = 9/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + +++ I+ +A + ++ ELK RPD + + + + +A A
Sbjct: 245 DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPD---DVSYTSMVWVLCKAGRLGEAE 301
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F +M+ + A+N +++ A+ + + ++ +E + G P + ++N ++
Sbjct: 302 ELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKL-LERLRERGCIPSVVSFNSILTC 360
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ A ++ M +K KPN S++ ++ + + K+ ME G+
Sbjct: 361 LGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ N+ + LCK + EA + + +G PNSVTY I G K G ++A + +
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M ++G N +Y +++ G E KE I +G P+ T + + + + A
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAG 539
Query: 371 KVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
+V + + + +K F +V +++ + GL
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P Y +I A E+ A +L +M + + F LV +E + E
Sbjct: 173 RPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALA 232
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ ++ ++ + +YNV I K A E+ + G++P+ V+Y+ ++ C
Sbjct: 233 LVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G EA++ + M P + Y TM+ ++ A + +G +P+
Sbjct: 293 KAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVV 352
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
+ S++T L KV EA L ++K+ N+ T+N I
Sbjct: 353 SFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNII 391
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D YN V+ S D ++ +L EM + ALVA + + ED +V+
Sbjct: 109 DAYNAVLPFL--SHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGA 166
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + S Y V I +L + R+ A LL +M G + + ++ + ++G
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQ 226
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A + S L P+ +Y + K G + A F E A G P+ + S
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTS 286
Query: 362 LVTGLAGASKVSEAKELIG 380
+V L A ++ EA+EL G
Sbjct: 287 MVWVLCKAGRLGEAEELFG 305
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 17/326 (5%)
Query: 68 TPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE 127
T ++ L+R+A + LS + N + + ++ PD N + + +I Y + MT+
Sbjct: 93 TAQNLLERIAVR---DYLSSPSVLNAVVRIHDD----PD-SNSQILSWLVIFYANSRMTQ 144
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A++ F+ M H + + A LL +L A+ V +V+ + + G+ P++ +N +
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV-GVVPNIHIFNVL 203
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A C+S D A +L EM+ + I P+ ++ L++ + K+ + + + MER G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ YN I+ C+ + EA L E+ G PN VTY+ I G+C+ + EEA +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG-- 365
+M GL P Y +++ +C+ G + A E + P+ T +L+
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 366 ----LAGASKVSEAKELIGLVKEKFT 387
+ A KV + GL ++FT
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFT 407
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 15/328 (4%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSII-LY 120
+ P H+ F++ I+ ++ Q L E+++R PDL F +++I LY
Sbjct: 191 VGVVPNIHI----FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDL----FTYNTLISLY 242
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+ M A+ M+ + + +N+L+ +E R+F E G P+
Sbjct: 243 CKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN---GATPN 299
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY +I +C +D A + M+ + + P ++ +++ +E K +D N++L
Sbjct: 300 HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 359
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M ++ N I++ CK+ A + +ML G+KP+ T+ I+GFCK
Sbjct: 360 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLH 419
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ AK+F M ++G SP+ S Y +V + E + E KG + + +
Sbjct: 420 EVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYR 479
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTK 388
+L+ L K+ A+ + L++ K K
Sbjct: 480 ALIRRLCKIDKIESAERIFTLMQGKGMK 507
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ S + A + M KP+ + L+ K V KV + M R G+
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ ++NV IH+ CK +A+ LL+EM S+ + P+ TY+ I +CK G EA
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SP+ Y +++Y C+ G AL +E G PN T +L+ G +
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRVN 314
Query: 371 KVSEAKELIGLVK-EKFTKNVDTWNEI 396
+ EA L +++ E V T+N I
Sbjct: 315 DLEEALRLREVMEVEGLHPGVVTYNSI 341
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 99 EELKTRPDLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
E L+ R ++ E H ++ Y + + A R EM E K+ N L
Sbjct: 318 EALRLREVMEVEGLHP-GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 376
Query: 152 LLALTIAKDY---KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
+ A D +VK+ +E G+KPD T+ +I FC+ + SA L EM
Sbjct: 377 INAYCKIGDMGSAMKVKKKMLE----AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 432
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
P+ S++ LV +Y ++ E V ++ + R G+ +S+Y I LCK+ K
Sbjct: 433 DAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 492
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
A+ + M KGMK +SV Y+ Y + K G
Sbjct: 493 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAG 524
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 3/232 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAV 130
H + ++ + KL E ++ L E+ R ++ + +++I Y + A+
Sbjct: 332 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK-VEPDNVTCNTLINAYCKIGDMGSAM 390
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ K+M E L+ F AL+ + K E G P TY+ ++ +
Sbjct: 391 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA-GFSPSYSTYSWLVDS 449
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + + + + E+ RK + + S + AL+ K +K E ++ +M+ GMK
Sbjct: 450 YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 509
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+Y ++ K K A +LDEM + + Y F + DG+
Sbjct: 510 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 164/344 (47%), Gaps = 15/344 (4%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG-- 121
AA + P+++ F++ I+ L E+ F+ Q E++ + NE I++ G
Sbjct: 143 AARVAPQTY----TFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNE--FTLGILVRGLC 196
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + + A+ + ++ + V +N L+ + E +R+ +E G+ PD+
Sbjct: 197 RAGLVKQALELVNNNNSCRIANRV-VYNTLVSRFCREEMNNEAERL-VERMNELGVLPDV 254
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKS----IKPNASSFGALVAGFYKEEKYEDVNK 237
T+N I A C + A I +M + +PN +F ++ GF K D
Sbjct: 255 VTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARG 314
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+++ M++ G + YN+ + L + + EA+ +LDEM++KG++PN+ TY+ + G C
Sbjct: 315 LVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLC 374
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
++ +A+ +M +G+ P++ Y T+++ C G A E I G PN
Sbjct: 375 RNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTY 434
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T +L+ L + EA+E++ + EK + + T N + GL
Sbjct: 435 TCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGL 478
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 122/263 (46%), Gaps = 3/263 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGI 177
+ + M A R + M+E + V FN+ + AL A E R+F ++ G+
Sbjct: 229 FCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGL 288
Query: 178 -KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+P++ T+N ++K FC+ A ++ M + + + + G + + +
Sbjct: 289 PRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEAR 348
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
VL M G++ YN+ + LC+ ++A+ L+D M+ G+ P++V YS ++G+
Sbjct: 349 LVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGY 408
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C G EAK M +G PN+ T+++ + K G A ++ K + P+
Sbjct: 409 CSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDT 468
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T +V GL ++ +A E++
Sbjct: 469 VTCNIVVNGLCRNGELDKASEIV 491
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 152/375 (40%), Gaps = 38/375 (10%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT-------RPDLQ 108
E+++E + P D + F+ I+ L A S+ +++ RP++
Sbjct: 239 ERLVERMNELGVLP----DVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVV 294
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+G V T K++ S+ +N L+ L + E + V
Sbjct: 295 TFNLMLKGFCKHGMMGDARGLVETMKKVGNFD---SLECYNIWLMGLLRNGELLEARLVL 351
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E GI+P+ TYN ++ C + S A ++ M R + P+ ++ L+ G+
Sbjct: 352 DEMVAK-GIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCS 410
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K + VL M R G + N +HSL K + EA+ +L +M K +P++VT
Sbjct: 411 RGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVT 470
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLS----------------------PNSSVYFT 326
+ + G C++G ++A + M +G + P+ Y T
Sbjct: 471 CNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTT 530
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEK 385
++ +CK G E A E +AK P+ T + + K+S A + L + +
Sbjct: 531 LINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNG 590
Query: 386 FTKNVDTWNEIEAGL 400
+K + T+N + GL
Sbjct: 591 CSKTLQTYNALILGL 605
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD TY +I C+ A EM K+++P++ ++ + F K+ K +V
Sbjct: 523 PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRV 582
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ MER G + YN I L + E L DEM KG+ P+ TY++ I C+
Sbjct: 583 LKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCE 642
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-------YETALGFC--KESIA 349
G ++A M + G+SPN S + ++ K D +E AL C KE++
Sbjct: 643 GGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL- 701
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ M L ++SEAKEL + +++
Sbjct: 702 ------YSLM---FNELLAGGQLSEAKELFEVSLDRY 729
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+ L+ L +E K+ FIE ++PD TY+ I +FC+ SSA+ +L +M
Sbjct: 528 YTTLINGLCKVGRLEEAKKKFIEMLAK-NLRPDSVTYDTFIWSFCKQGKISSAFRVLKDM 586
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+R ++ AL+ G + ++ + M+ G+ + YN I LC+ K
Sbjct: 587 ERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKA 646
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A +LL EML KG+ PN ++ I F K +F+ A + + + N ++Y M
Sbjct: 647 KDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNI-CGRKEALYSLM 705
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ GG A + S+ + K L+ L ++++A L+
Sbjct: 706 FNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLL 757
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R K+M+ + ++ +NAL+L L E+ + E K GI PD+ TYN +I
Sbjct: 579 AFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEM-KEKGISPDICTYNNII 637
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM-MERYGM 247
CE + A S+L EM K I PN SSF L+ F K ++ ++ ++ + G
Sbjct: 638 TCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGR 697
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
K ++Y++ + L + +EAK L + L + + + Y I C+D +A
Sbjct: 698 KE--ALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANS 755
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ + G + + + ++ + K G+ A
Sbjct: 756 LLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQA 788
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 104/286 (36%), Gaps = 76/286 (26%)
Query: 170 EFPKTYGIKPDLDTYN-------------------------RV----------IKAFCES 194
+FP + P L YN RV I + CES
Sbjct: 107 QFPS---LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCES 163
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAG----------------------------- 225
A + +M +K PN + G LV G
Sbjct: 164 RAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYN 223
Query: 226 -----FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
F +EE + ++++ M G+ V +N RI +LC+ K EA + +M
Sbjct: 224 TLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMD 283
Query: 281 ---GM-KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
G+ +PN VT++ + GFCK G +A+ M G + Y + + + G+
Sbjct: 284 AELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGE 343
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
A E +AKG PN T ++ GL +S+A+ L+ L+
Sbjct: 344 LLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLM 389
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 44/190 (23%)
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + +YN+ + S + + L +ML+ + P + T++ I+ C+ F+ A
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL----------------------GFC 344
+ + M G PN +V +C+ G + AL FC
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFC 230
Query: 345 KESIAK------------GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
+E + G +P+ T S ++ L A KV EA + D
Sbjct: 231 REEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFR----------DM 280
Query: 393 WNEIEAGLPQ 402
+ E GLP+
Sbjct: 281 QMDAELGLPR 290
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 3/287 (1%)
Query: 90 YFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
Y + + L E+ DL ++F +++ A + AV EM + + AF
Sbjct: 98 YLDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGV-VAAEAF 156
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N +L A+ A D K ++F EF + G P TYN ++ + +A ++ M+
Sbjct: 157 NPVLRAMLRAGDVKGAAKLF-EFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRME 215
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
R+ + P ++GA+V G + + +D KV + MER G+ +Y+ I CK +
Sbjct: 216 REGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEID 275
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A + + M++ ++PN V YS I G G EA+ +R M +S +PN Y +M+
Sbjct: 276 CALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMI 335
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
K GD AL +E I G +PN + L+ GL ++ +A
Sbjct: 336 QGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDA 382
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 8/307 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTF 133
AF+ + + A G ++ E ++ + P H +++ G+A A+
Sbjct: 155 AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAG---AAMGVM 211
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M+ + V + A++ L K+ +V E + G+ + Y+ VI FC+
Sbjct: 212 RRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERN-GLARNEFVYSTVITGFCK 270
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + A + M ++PN + A++ G K + + + M +
Sbjct: 271 SGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIIT 330
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I K+ + A ++ +EM+ G PN+V+YS I G C G ++A ++ M
Sbjct: 331 YGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHML 390
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKV 372
+ G +P++ Y +M+ +C G + L + +A G P+ + L+ GL A +
Sbjct: 391 DRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDL 450
Query: 373 SEAKELI 379
A +L+
Sbjct: 451 PRAMDLL 457
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 9/268 (3%)
Query: 140 KLRHSVGAFNALLLALT---IAKD---YKEVK-RVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+L ++ +FN LL + + +D Y +V R+ E + + PD TY+ V+ A
Sbjct: 71 RLAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALA 130
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A +++ EM + A +F ++ + + K+ + M+ G +
Sbjct: 131 DAGRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAA 189
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YNV +H L + A ++ M +G+ P +TY + G + G ++A K M
Sbjct: 190 TYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEM 249
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+GL+ N VY T++ CK G+ + AL + +A PN +++ GLA K+
Sbjct: 250 ERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKM 309
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+EA+ L ++ K N+ T+ + G
Sbjct: 310 TEAELLFREMIDSKCAPNIITYGSMIQG 337
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 6/271 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--FIEFPKTYGIKPDLDTYNRVIKA 190
F E+ + LR + +FN L+ L +++ E R+ +E + Y PD+ TY+ +I
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY---PDVFTYSVLIHG 302
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A + EM ++ ++PN +F AL+ G Y+ + + M G+K
Sbjct: 303 LCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPD 362
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ MYN ++ LCK+ +A+ L+DEM GMKP+ +TY+ I G+CK+G+ E A + +
Sbjct: 363 LVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M+ G+ ++ + ++ C+ G A +E + G P+ T ++ G
Sbjct: 423 GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
V +L+ ++ K V T+N + GL
Sbjct: 483 NVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 147/326 (45%), Gaps = 14/326 (4%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIIL 119
R L P + ++F+ IN L ++ + + + +EE + PD+ H +
Sbjct: 250 RKRGLRPTT----VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
G+ ++ E + F EM + LR + F AL+ ++ + + T G+KP
Sbjct: 306 EGRLDVAE---QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM-LTMGVKP 361
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL YN ++ C+ D + A ++ EM +KP+ ++ L+ G+ KE E ++
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G+ + I C+ + +A+ L EM+ GMKP+ TY+ I G+CK
Sbjct: 422 KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN + K + M +G P Y ++ +CK G + A + + G P+ T
Sbjct: 482 GNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITY 541
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
L L G K +A++L+ L EK
Sbjct: 542 NIL---LEGHCKNGKAEDLLKLRNEK 564
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P + YN +I FC+ A I E+ ++ ++P SF L+ G K ++
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + ME + V Y+V IH LCK + A+ L DEM +G++PN +T++ I
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G + + A Y M G+ P+ +Y T++ +CK GD A E G P
Sbjct: 337 GQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP 396
Query: 355 NFTTMKSLVTGLAGASKVSEAKEL 378
+ T +L+ G + A E+
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEI 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%)
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S+ + ++ +E+ P + L+ F KE D + + + G++
Sbjct: 201 SNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVS 260
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I+ LCK R E L M + P+ TYS I+G CK+G + A++ + M
Sbjct: 261 FNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL PN + ++ + ++A+ + + G P+ +L+ GL V+
Sbjct: 321 QRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380
Query: 374 EAKELIGLVK 383
+A++L+ +K
Sbjct: 381 KARKLVDEMK 390
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
E+L G P Y+ I FCK+G+ +AK + + GL P + + T++ +CK
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + K P+ T L+ GL ++ A++L ++++
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 5/324 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A ++ + E+ + + NE + + + M E A++
Sbjct: 245 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVL 304
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M +H + N ++ A+ + F+ YG PD +Y V++ C
Sbjct: 305 QQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRGLCR 363
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM RK+ PN +F + ++ E K++++M YG G+
Sbjct: 364 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 423
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN +H C + A L + + +PN++TY+ + G C + A + M
Sbjct: 424 YNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMI 480
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
N+ + +V F C+ G E A+ + + G PN T +L+ G+
Sbjct: 481 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 540
Query: 374 EAKELI-GLVKEKFTKNVDTWNEI 396
EA EL+ GLV + + + T++ +
Sbjct: 541 EALELLHGLVSKGVSLDTITYSSV 564
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + TY +++A C+SS A ++L EM K PN ++ ++ G +E + +D
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L + YG + + Y + LC R+ + K L EM+ K PN VT+ +
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G E A + + MS G +PN+++ ++ +CK G + A F G P+
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ +++ GL A + AKEL+ +V++ N T+N
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 34/300 (11%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM ++ +N ++ + + K + +YG +PD+ +Y V
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL-SSYGFQPDIVSYTTV 252
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + + AEM K PN +F LV F + E +VLQ M ++G
Sbjct: 253 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 312
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
++ N+ I+++CK + +A L+ M G P++++Y+ + G C+ G +E AK+
Sbjct: 313 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 372
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL-----------------------GFC 344
M PN + T + +C+ G E A+ GFC
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432
Query: 345 KESIAKGWV---------PNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
+ + PN T +L+TGL A ++ A EL+ G++++ N T+N
Sbjct: 433 VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFN 492
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 4/254 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A R + + V A+N L+ +R+ P + PD TY
Sbjct: 90 TSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYT 145
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C+ A ++L +M ++ +P+ ++ L+ K + + VL M
Sbjct: 146 PIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK 205
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YNV I+ +C+ + +AK +L+ + S G +P+ V+Y+ + G C +++
Sbjct: 206 GCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDV 265
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M + PN + +V F C+GG E A+ ++ G PN T ++
Sbjct: 266 KVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINA 325
Query: 366 LAGASKVSEAKELI 379
+ +V +A + +
Sbjct: 326 ICKQGRVDDAYDFL 339
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 15/321 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A + + L E+ + NE I + Q + E A++
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 409
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M E+ + +NAL+ + +F P +P+ TY ++ C
Sbjct: 410 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP----CEPNTITYTTLLTGLCH 465
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGF----YKEEKYEDVNKVLQMMERYGMKS 249
+ +A +LA M +K NA +F LV+ F + EE E VN QMME +G
Sbjct: 466 AERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVN---QMME-HGCTP 521
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ +N + + K EA LL ++SKG+ +++TYS + ++ EEA +
Sbjct: 522 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 581
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ + G+ P +Y +++ +CK + + A+ F ++ G +PN +T L+ GLA
Sbjct: 582 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641
Query: 370 SKVSEAKELIGLVKEKFTKNV 390
+ EA+ ++ E + K V
Sbjct: 642 GLLKEARYVL---SELYAKGV 659
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 5/236 (2%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
D E R +E + G PD+ ++I+ C +S A +L + + ++
Sbjct: 54 DLAEAAR-LVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
LVAG+ + + + +++ M + Y I LC + +A ALLD+ML
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+G +P+ VTY+ + CK F EA M G +PN Y ++ MC+ G +
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
A + G+ P+ + +++ GL A + + K L +V +K N T++
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 39/150 (26%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G P+L T+N ++ + +S A +L + K + + ++ ++V +E++ E+
Sbjct: 517 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEE 576
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA-------------------------- 268
++L ++ GM+ V MYN + +LCK +C
Sbjct: 577 AIQMLHAVQDMGMRPKVGMYNKILFALCK--RCETDQAIDFFAYMVSNGCMPNESTYIIL 634
Query: 269 -----------EAKALLDEMLSKGMKPNSV 287
EA+ +L E+ +KG+ S+
Sbjct: 635 IEGLAHEGLLKEARYVLSELYAKGVLSKSL 664
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R ++ L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ +M+ G++ V Y+V I+ LCK K +A AL DEML G+ PN VT++ I G
Sbjct: 192 RLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + YR M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL-KSVMQASGVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A ++ EM + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I G CK+G+ E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P Y ++ CK
Sbjct: 334 RKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD T KE G++PN T
Sbjct: 394 KGDVWTGSKLLKEMQRDGYLPNVVT 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 27/288 (9%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGI-KPDLDTYN 185
H ++++ M H + L+ + +++ K VF +T G + D+ ++
Sbjct: 11 HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70
Query: 186 RVIKAFCESS---DSSSAYSILAEMD--------RKSIKPNAS-SFGALVAGFYKEEKYE 233
+I A+ ES D+ Y + E RK I+ + LV GFY+E
Sbjct: 71 GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL-- 128
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
G + + +N+ +H+ CK + A+++ D + G++P+ V+++ +
Sbjct: 129 ----------ECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLM 178
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+ K G+ +E + +M SG+ P+ Y ++ +CK + A E + G V
Sbjct: 179 NGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLV 238
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
PN T +L+ G +V A E+ ++ + ++ T+N + GL
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGL 286
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A++ + +D ++ +V +N ++ ++ K E ++ E + GI PD+ TYN
Sbjct: 193 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV-SKGISPDVVTYN 251
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A + +M ++I PN +F LV GF KE + ++ VL MM +
Sbjct: 252 ALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQ 311
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K V YN + C +++ +AK + + + +G+ PN +YS I+GFCK +EA
Sbjct: 312 GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ M + + P+ Y +++ +CK G AL E +G + T S++
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Query: 366 LAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
L +V +A L+ +K E ++ T+ + GL
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F +M + +V FN L+ + KE K V K GIKPD+ TYN ++
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQ-GIKPDVFTYNSLM 324
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + + A I + ++ + PN S+ ++ GF K +K ++ + + M +
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII 384
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I LCKL K + A L+DEM +G+ + +TY+ + CK+ ++A
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + G+ P+ Y T+V +CK G E A ++ + KG++ + +++ G
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504
Query: 369 ASKVSEAKELIGLVKE 384
E+ +L+ ++E
Sbjct: 505 HGLFDESLDLLSKMEE 520
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ V +N+L+ + K+ + K +F + G+ P++ +Y+ +I FC+
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR-GVNPNIHSYSIMIHGFCKIK 366
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ EM +I P+ ++ +L+ G K K K++ M G+ YN
Sbjct: 367 KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYN 426
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LCK + +A ALL +M +G++P+ TY+ + G CK+G E+A+ + +
Sbjct: 427 SILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVK 486
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + ++Y M+ C G ++ +L + G +PN T + ++ L + +A
Sbjct: 487 GYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKA 546
Query: 376 KELI 379
++L+
Sbjct: 547 EKLL 550
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ T +IK C A ++ N S+G L+ G K +
Sbjct: 137 GYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA 196
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ ++ ++ V MYN I S+CK++ EA L EM+SKG+ P+ VTY+ I G
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G ++A + M ++PN + +V CK + A + +G P+
Sbjct: 257 FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPD 316
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T SL+ +V++AK + + ++
Sbjct: 317 VFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 41/248 (16%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+Y +I C+ +S+A +L +D K ++PN + ++ K + + + M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ V YN I C + K +A L ++M+ + + PN T++ + GFCK+
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 303 EEAKKFYRIM-----------------------------------SNSGLSPNSSVYFTM 327
+EAK +M S G++PN Y M
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GL 381
++ CK + A+ KE +P+ T SL+ GL K+S A +L+ G+
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 382 VKEKFTKN 389
+K T N
Sbjct: 419 PHDKITYN 426
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 18/259 (6%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+ T S +DR +NK + FN ISQ P++ H++SI+++G
Sbjct: 314 KPDVFTYNSLMDRYCLVKEVNK--AKHIFNTISQR----GVNPNI-----HSYSIMIHGF 362
Query: 123 ANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIKP 179
+ + A+ FKEM + + V +N+L+ L + K +K ++ G+
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK--LVDEMHDRGVPH 420
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++ A C++ A ++L +M + I+P+ ++ LV G K + ED V
Sbjct: 421 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVF 480
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG-FCK 298
+ + G V++Y I C E+ LL +M G PN+VTY I F K
Sbjct: 481 EDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDK 540
Query: 299 DGNFEEAKKFYRIMSNSGL 317
D N ++A+K R M GL
Sbjct: 541 DEN-DKAEKLLREMITRGL 558
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 4/234 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L + N +H F + + + ++ +++ ++ K E +F E I
Sbjct: 329 LVKEVNKAKH---IFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM-HCNNII 384
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ TYN +I C+ S A ++ EM + + + ++ +++ K + + +
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M+ G++ + Y + LCK + +A+ + +++L KG + Y+ I GFC
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
G F+E+ M +G PN+ Y ++ + + + A +E I +G
Sbjct: 505 HGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP + + +++ + +S+ S+ S+ +M+ I + L+ F + +
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
VL + + G + V I LC + +A D++++ G N V+Y I G C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G A + R + + PN +Y T++ MCK A E ++KG P+
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L++G K+ +A +L ++ E NV T+N + G
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 7/219 (3%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDR----KSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
R+ F E+ D+ +++++ +R K+ KP+ FG ++ K Y V + +
Sbjct: 40 RLYSQFHENDDNK--HNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQ 97
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME G+ S + + ++ I+ +L + + ++L ++L G +PN +T + I G C G
Sbjct: 98 MEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQ 157
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+A +F+ + G N Y T++ +CK G AL + K PN +
Sbjct: 158 IHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 217
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
++ + V+EA +L +V + + +V T+N + +G
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 39/353 (11%)
Query: 53 SNPEKILEICRAAALTPESHLDRL-----AFSIAINKLSEANYFNGISQYLEELKTRPDL 107
++ +++ + C A AL H ++S I KL+ + F + L L+ R
Sbjct: 54 TDVKEVKDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIR 113
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
NE I YG+A++ E + F +M ++ +FN LL L + + +
Sbjct: 114 CNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEI 173
Query: 168 FIEF------PKTY----------------------------GIKPDLDTYNRVIKAFCE 193
F + P + G++P + TYN + C
Sbjct: 174 FQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCR 233
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ +A + M K PNA ++ L+ G+ KY++ K++ ME +G K
Sbjct: 234 KGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVN 293
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y V + L K E ++LL+EM + +KP+ VTY+ + CK+G +A K M
Sbjct: 294 YGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQ 353
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G PN++ Y M+ C GD++ A+ + G P+ T SLV GL
Sbjct: 354 VGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGL 406
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G K +Y+ +I S + +IL + ++I+ N + F AL+ + K E
Sbjct: 76 GFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKG 135
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + + +NV +++L + ++A + + G +PNSV+Y+ I G
Sbjct: 136 IELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKG 195
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K G +E+A + M G+ P+ Y + + +C+ G+ +TAL K KG PN
Sbjct: 196 WIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPN 255
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G K EAK+L+
Sbjct: 256 AVTYALLMEGWCFIGKYKEAKKLM 279
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 152/354 (42%), Gaps = 40/354 (11%)
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+I + L A Q+ +E+ + PD+ H + G+ E+AV+ EM
Sbjct: 259 NILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGE---LENAVKLLDEMAA 315
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
L + + +++ L + RV +E +G+ D + VI FC D +
Sbjct: 316 KGLESNATVYTSVIALLCNKGQVSDALRV-LEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV-- 256
+A + EM ++ + + + AL+ G + + ++ ++VLQ M G+ V Y V
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434
Query: 257 -------------RIHS--------------------LCKLRKCAEAKALLDEMLSKGMK 283
R+H+ LCK A LL EM +KG++
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
N TY+ I G CK GN E+A + M +G + Y T++ +CK G+++ A
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNM 554
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
+E + KG P+ T L+ G + +V K+L+ + EK + NV T+N +
Sbjct: 555 LQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSL 608
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 151/325 (46%), Gaps = 8/325 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG---QANMTEHAV 130
DR+ + IN L A + L+E+ + + +++++ G + NM E A
Sbjct: 391 DRVTHTALINGLCRAGELKEADRVLQEMVDKG--LDVDVVTYTVLIDGYCKRGNMVE-AF 447
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R EM ++ +V + AL L D + + E G++ ++ TYN +I
Sbjct: 448 RVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK-GLELNVYTYNSLING 506
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + A I+ EM+ + + ++ L+ K +++ + +LQ M G+K
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
++ YNV ++ C + K LL+ ML K ++PN VTY+ + +C D N + + Y+
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYK 626
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + ++PN + Y ++ CK + + AL F +E I KG ++ +L+ L
Sbjct: 627 GMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKK 686
Query: 371 KVSEAKELIGLVK-EKFTKNVDTWN 394
K SEA+ ++ E T D ++
Sbjct: 687 KFSEARVFFDKMRNEGLTAEPDVYS 711
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F+E+ + +V + N LL AL A K+ + F E PD+ TY
Sbjct: 241 DEAIALFRELPDK----NVCSHNILLKALLSAGRLKDACQHFDEMSS----PPDVVTYGT 292
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C + +A +L EM K ++ NA+ + +++A + + D +VL+ M +G
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ ++ I C A A+ L +EM +G+ + VT++ I G C+ G +EA
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M + GL + Y ++ CK G+ A E + + PN T +L GL
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V A EL+ + + NV T+N + GL
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R EM+ R V + L+ L + ++ + E GIKP + TYN
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK-GIKPSIATYNV 572
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ FC S +L M K+++PN ++ +L+ + ++ + ++ + M
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN+ I CK R EA EM+ KG++ + +YS I K F EA+
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEAR 692
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
F+ M N GL+ VY + + E+ + C E + V
Sbjct: 693 VFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEASHV 739
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
I KLS+A F + + +L E I YG A + A+RTF + L
Sbjct: 142 IEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGL 201
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ SV +FN LL L K + V +F K +GI P++ T N ++KA C+ +D +A
Sbjct: 202 QPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAI 261
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM PN ++ ++ G+ + +V + G + Y + +
Sbjct: 262 RVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGY 321
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK + +A ++DEM ++PN VTY I +CK+ E M P+S
Sbjct: 322 CKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS 381
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++ ++ +C+ G E A K+ + K P+ +L+ L KV EA++L
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE 441
Query: 382 VKEKFTKNVDTWNEIEAGL 400
++ + T+N + AG+
Sbjct: 442 FEKGSIPSTLTYNALIAGM 460
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKE 135
+F+ +N L + F+ + + + + + F + ++ + N + A+R +E
Sbjct: 207 SFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEE 266
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M +V + +L D +RVF E G PD TY ++ +C+
Sbjct: 267 MPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEI-LDRGWVPDPTTYTILMDGYCKKG 325
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGV--- 251
A ++ EM+ ++PN ++G ++ + KE+K +V +L M+E+ + S
Sbjct: 326 RFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCC 385
Query: 252 -------------------------------SMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ + IH LCK K EA+ L DE K
Sbjct: 386 RVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEK 444
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G P+++TY+ I G C+ G EA + + M G PN+ Y ++ CK G+
Sbjct: 445 GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREG 504
Query: 341 LGFCKESIAKGWVPNFTT 358
+ +E + G +PN T
Sbjct: 505 IRVMEEMLDNGCLPNKAT 522
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 37/128 (28%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E +++F EF K G P TYN +I CE + A + M K PNA ++ L
Sbjct: 434 EARKLFDEFEK--GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF CK+ E +++EML G
Sbjct: 492 IKGF-----------------------------------CKVGNAREGIRVMEEMLDNGC 516
Query: 283 KPNSVTYS 290
PN TY+
Sbjct: 517 LPNKATYA 524
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 149/363 (41%), Gaps = 37/363 (10%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
L+ +I +N L + F + +L +++ + + + I Y + + E A +
Sbjct: 255 LNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQL 314
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ + +NA+L L Y K V IE + G+ P+ TYN ++ C
Sbjct: 315 LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAATYNTLLVEIC 373
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVA---------------------------- 224
+ A I EM R+ + P+ SF +L+
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 225 -------GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
GF + D K+ M G V YN ++ LCK + A+A L +EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ +GM P+ T++ I G+CKDGN ++A + M + L P+ Y T++ CK G+
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
A + I K +P+ + +++ G + + EA L + EK + N+ T N +
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 397 EAG 399
G
Sbjct: 614 IKG 616
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 12/333 (3%)
Query: 58 ILEICRAAALTPESHL-----------DRLAFSIAINKLSEANYFNGISQYLEELKTRPD 106
++EICR + + D ++FS I L+ + + E++
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
+ + + I + + A++ EM V +N L L K + +
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+F E + G+ PD T+ +I+ +C+ + A ++ M R ++KP+ ++ L+ GF
Sbjct: 489 LFNEMVER-GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + ++ M R + Y ++ C EA L D+ML KG++PN
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VT + I G+C+ G+ +A ++ M ++G+ P+S Y T++ K + E A E
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+G N T ++ G K+ EA++++
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 144 SVGAFNALLLALTI-AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
SVG LL+ + AK +E F + + G+ ++ N+++ + A+
Sbjct: 185 SVGLIYDLLVRTYVQAKKLREGSEAF-QILRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
I E+ R I+ N + +V K+ K+E+V L ME G+ + + YN I++ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ EA LL+ S+GM+P +TY+ +YG CK G ++ AK M GL+PN++
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y T++ +C+ + A E +G +P+ + SL+ LA + +A
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P+L T N +IK +C S D AY L++M I P++ S+ L+ G+ KE E
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ ME+ G++ + YN+ ++ C K EA+ +L +M+ G+ P+ TYS I G
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPN 320
N +EA +F+ M GL P+
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ TYN + C+ + A + EM + + P+ +F L+ G+ K+ +
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R +K YN I CK + AK L D+M+ K + P+ ++Y + G
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G EA M G+ PN T++ C+ GD A + + I+ G +P+
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +L+ G + + +A LI + K N+ T+N I G
Sbjct: 642 SFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA F+ + + S+ A N LL L ++ E + GI+
Sbjct: 197 YVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG-GIEL 255
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ T N ++ A C+ + L++M+ K + + ++ L+ + +E E+ ++L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
GM+ G+ YN ++ LCK+ K AK +L EML G+ PN+ TY+ + C+
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N EA++ + MS G+ P+ + +++ + + G AL +E G VP+
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ G +S+A ++
Sbjct: 436 TILIDGFCRNGALSDALKM 454
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 3/252 (1%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M A F EM E + F L+ + + +F +T +KPD TY
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTY 540
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQMME 243
N +I FC++ + A + +M RK I P+ S+G ++ GF E +N QM+E
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G++ + N I C+ +A L +M+S G+ P+S +Y+ I G+ K+ N E
Sbjct: 601 K-GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M GL N Y ++ C G + A ++ I G P+ T SL+
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719
Query: 364 TGLAGASKVSEA 375
G + EA
Sbjct: 720 NGHVSQDNMKEA 731
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIIL 119
R L +D + ++ +N L + F E+ R PD F+ + ++
Sbjct: 455 RDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD-----FYTFTTLI 509
Query: 120 YG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
G NM + A+ F+ M L+ +N L+ A + K ++ + +
Sbjct: 510 RGYCKDGNM-DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK-D 567
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PD +Y V+ FC S A ++ +M K I+PN + L+ G+ +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ L M G+ YN I K +A L++EM +G++ N +TY+ + GF
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G +EA++ R M G++P+ + Y +++ + + A F E + +G VP+
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 184 YNRVIKAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
Y+ +++ + ++ + S A+ IL RK + + ++ L+ G + + ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILR---RKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+ R G++ V N+ +++LCK RK L +M KG+ + VTY+ I +C++G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EEA + S+ G+ P Y ++Y +CK G Y+ A E + G PN T
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 361 SLVTGLAGASKVSEAKEL 378
+L+ + + EA+E+
Sbjct: 367 TLLVEICRRDNILEAQEI 384
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ LV + + +K + ++ Q++ R G+ ++ N + L + A + E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G++ N T + + CKD FE F M G+ + Y T++ C+ G E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEI 396
A ++G P T +++ GL K AK+ LI +++ T N T+N +
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+++ PD++ + +I++ G + E AV+ +KEM + V +F+ L+ L
Sbjct: 253 MDQCSVAPDVR-----SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GL 306
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + ++ K G+ PD Y VI FC + S A + EM P+
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G K+ + D K+L ME G+ + + IH C+ A L D
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+L + ++P+ VTY+ I G C+ G+ +A + + M + PN Y ++ C+ G
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
E A GF E + KG +PN T S++ G + V + ++ + +++
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQ 535
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 8/333 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D +F+I I ++ +E++ R PD+ + + I L+ + +HA
Sbjct: 261 DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVS---FSCLIGLFSRRGEMDHAG 317
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+EM L + ++ A E RV E +G PD+ TYN ++
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM-VGFGCLPDVVTYNTLLNG 376
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A +L EM+ + + P+ +F L+ G+ ++ +E+ ++ + R ++
Sbjct: 377 LCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I +C+ A+A L D+M ++ + PN +TYS I C+ G E+A F
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G PN Y +++ C+ G+ + F ++ P+ T +L+ G
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556
Query: 371 KVSEAKELIGLV-KEKFTKNVDTWNEIEAGLPQ 402
+ A + ++ KE + T+N I G +
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSE 589
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 105/207 (50%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ T+N +I A + D +A +++ M + +KP ++ +++ G K +++ +V
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M++ + V +N+ I C++ + EA EM + + P+ V++S I F +
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G + A + R M GL P+ +Y ++ C+ G AL E + G +P+ T
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
+L+ GL ++ +A++L+ ++E+
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEER 396
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 36/282 (12%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM++ + V N L+ A A D + ++ G+KP + TYN V+K
Sbjct: 179 VISEMEKRCVFPDVVTHNVLIDARFRAGDV-DAAIALVDSMANRGLKPGIVTYNSVLKGL 237
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAG------------FYKEEKYEDVNK-- 237
C+ A + MD+ S+ P+ SF L+ G FYKE ++ V
Sbjct: 238 CKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDV 297
Query: 238 ---------------------VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
L+ M+ G+ +Y + I C+ +EA + DE
Sbjct: 298 VSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ G P+ VTY+ + G CK +A+K M G++P+ + T+++ C+ G+
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGN 417
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+E AL + + P+ T SL+ G+ +++A EL
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 132/285 (46%), Gaps = 7/285 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ +N L + + + L E++ R PDL H Y + E+A+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHG---YCRQGNFENAL 422
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F + +LR V +N+L+ + D + ++ + I P+ TY+ +I +
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM-HAREILPNHITYSILIDS 481
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
CE A+ L EM +K PN ++ +++ G+ + + + LQ M + +
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +N IH K A + + M + ++P++VTY+ I GF + GN ++A + ++
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M +SG+ P+ Y +++ G+ + A E I +G+ P+
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 142/304 (46%), Gaps = 9/304 (2%)
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
L + P Q + F I Y Q+ A F+ + +H++ A NALL L+ A
Sbjct: 79 LASSPTPQPQVFDL-LIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAG- 136
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ + + + + + T N ++ ++C++ + A ++++EM+++ + P+ +
Sbjct: 137 WPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHN 196
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ ++ + ++ M G+K G+ YN + LCK R+ +AK + M
Sbjct: 197 VLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQC 256
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ P+ +++ I GFC+ G +EA KFY+ M + ++P+ + ++ + G+ + A
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHA 316
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA----KELIGLVKEKFTKNVDTWNEI 396
+ +E G VP+ ++ G A +SEA E++G +V T+N +
Sbjct: 317 GAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF---GCLPDVVTYNTL 373
Query: 397 EAGL 400
GL
Sbjct: 374 LNGL 377
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + EM+E + + F L+ +++ ++F + ++PD+ TYN +I
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR-LRPDVVTYNSLI 444
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C D + A + +M + I PN ++ L+ ++ + ED L M + G
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I C+ + + L +M + P+ +T++ I+G+ K+ N A
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ IM + P++ Y ++ + G+ + A K G P+ T SL+ G
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624
Query: 369 ASKVSEAKEL 378
A +A +L
Sbjct: 625 AGNSKQAFQL 634
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 2/328 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ + L A + + +EE+ N + I + + E
Sbjct: 216 DVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVH 275
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M EH V + A ++ ++ EV R + +YG+ P++ YN ++K C
Sbjct: 276 AQMAEHGCAPDVRMY-ATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCS 334
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +LAEM K + +F LV + + V +VL+ M +G V
Sbjct: 335 ADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVIT 394
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I+ CK EA LL M + G +PN+V+Y+ + G C + +A++ M
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G PN + T++ F+CK G E A+ K+ + G P+ + +++ GL A
Sbjct: 455 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD 514
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +VK+ + N ++ I + L
Sbjct: 515 EALELLNVMVKKGMSPNTIIYSSIASAL 542
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV +++ VG N +L A+ E R+ + ++G +PD+ +YN V+
Sbjct: 165 AVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL 224
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C + ++ EM PN +F L+ + +E V++V M +G
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V MY I +CK + A+ +L+ M S G+ PN V Y+ + G C +EEA+
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + + + +V F+C+ G + + ++ + G +P+ T +++ G
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 369 ASKVSEAKELI 379
+ EA L+
Sbjct: 405 EGLIDEAVMLL 415
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 152/351 (43%), Gaps = 7/351 (1%)
Query: 29 SSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEA 88
S G + + S + L + + + + ++E AA P + + FS I L
Sbjct: 210 SFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPP----NIVTFSTLIGHLCRN 265
Query: 89 NYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
F + + ++ + R +A I + E A M + L +V +
Sbjct: 266 GLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCY 325
Query: 149 NALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N LL L A ++E + + E F K + D T+N ++ C++ +L +M
Sbjct: 326 NTLLKGLCSADRWEEAEGLLAEMFDKDCPL--DDVTFNILVDFLCQNGLVDRVIEVLEQM 383
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
P+ ++ ++ GF KE ++ +L+ M G + Y + + LC +
Sbjct: 384 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERW 443
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A+ L+ +M+ +G PN VT++ I CK G E+A + + M +G SP+ Y T+
Sbjct: 444 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 503
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ + K G+ + AL + KG PN S+ + L+G ++++ ++
Sbjct: 504 IDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P Y+ ++A C +S A +L ++ + + + ++ + ++
Sbjct: 141 GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200
Query: 236 NKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L+ ++ +G + V YN + LC R+ + L++EM++ G PN VT+S I
Sbjct: 201 VRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIG 260
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
C++G FE + + M+ G +P+ +Y T++ +CK E A G + G P
Sbjct: 261 HLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSP 320
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
N +L+ GL A + EA+ GL+ E F K+
Sbjct: 321 NVVCYNTLLKGLCSADRWEEAE---GLLAEMFDKD 352
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + + + ++M EH V + ++ E + G +P+
Sbjct: 369 QNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM-AACGCRPNT 427
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y V+K C + A ++++M ++ PN +F L+ K+ E ++L+
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G + Y+ I L K EA LL+ M+ KGM PN++ YS +G
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+ + + + ++ + ++ +Y ++ +CK G+ + A+ F ++ G VPN +T
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607
Query: 362 LVTGLAGASKVSEAKELI 379
L+ GLA V EA+E++
Sbjct: 608 LIRGLASEGFVKEAQEIL 625
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 121/282 (42%), Gaps = 1/282 (0%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ L + + + + LE++ + + + I + + + + A
Sbjct: 352 DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V + M R + ++ +L L A+ + + + + + + G P+ T+N +I
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQ-GCPPNPVTFNTLIN 470
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A +L +M P+ S+ ++ G K ++ ++L +M + GM
Sbjct: 471 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSP 530
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+Y+ +L + + + + + ++ ++V Y+ I CK G + A +F
Sbjct: 531 NTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFL 590
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
M +SG PN S Y ++ + G + A E +KG
Sbjct: 591 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 2/124 (1%)
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
S + PN+ TY + C G +A M+ G +P +Y + C+ +
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT--KNVDTWNEI 396
A+G ++ +G + ++ + V EA L+ + F +V ++N +
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223
Query: 397 EAGL 400
GL
Sbjct: 224 LRGL 227
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 118/260 (45%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
+Y + +M E + F +M + + N +L L +V R GI+
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TYN ++ +FC+ A +L +M + PN ++ LV G + E ++
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+Q M R G++ Y+ I C+ + EA L +EMLS+G P VTY+ +YG CK
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G +A+K +M N L P+ Y T++Y + G+ A E +G VP+ T
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 359 MKSLVTGLAGASKVSEAKEL 378
+L+ GL + A L
Sbjct: 368 YNTLIDGLCRMGDLDVAMRL 387
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 7/279 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + M E +R +V +N +L + +E ++ ++ K G P+ TYN ++
Sbjct: 174 AREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKM-GCLPNDVTYNVLV 232
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
S + A ++ EM R ++ +A ++ L+ G+ ++ + ++ +++ + M G
Sbjct: 233 NGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAV 292
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN ++ LCK + ++A+ LLD M++K + P+ V+Y+ IYG+ + GN EA
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + GL P+ Y T++ +C+ GD + A+ E I G P+ T LV G
Sbjct: 353 FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCK 412
Query: 369 ASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGLP 401
+ AKEL GL ++F E++ G P
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 4/289 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ I+YG + A + M L + ++N L+ T + E +F E
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL- 356
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ P + TYN +I C D A + EM + P+ +F LV GF K
Sbjct: 357 RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL 416
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ M G++ Y RI KL ++A + +EML++G P+ +TY+ F
Sbjct: 417 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G K GN +EA + + M +GL P+ Y ++++ G A E ++KG
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGI 536
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
P+ T L+ A ++ A + EK NV T+N + GL
Sbjct: 537 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 585
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+R EM +H V F L+ + K +F E G++PD Y I
Sbjct: 384 AMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR-GLQPDRFAYITRI 442
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ D S A+ + EM + P+ ++ + G +K ++ +++++ M G+
Sbjct: 443 VGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV 502
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y IH+ +A+A+ EMLSKG+ P+ VTY+ I+ + G + A
Sbjct: 503 PDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILH 562
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ M G+ PN Y ++ +CK + A F E AKG PN T L+
Sbjct: 563 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL TYN I + + A ++ +M + P+ ++ +++
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 524
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
V M G+ V Y V IHS + A EM KG+ PN +TY+ I G
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 584
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK ++A KF+ M G+SPN Y ++ C G ++ AL K+ + + P+
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644
Query: 356 FTTMKSLVTGL 366
T +L+ L
Sbjct: 645 SCTHSALLKHL 655
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE-D 234
G+ PD TY +I A + A ++ EM K I P+ ++ L+ + + +
Sbjct: 500 GLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLA 559
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ +M E+ G+ V YN I+ LCK+RK +A EM +KG+ PN TY+ I
Sbjct: 560 ILHFFEMHEK-GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
C G+++EA + Y+ M + + P+S + ++ + K DY++
Sbjct: 619 ENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK--DYKS 661
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 1/269 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ KEM+ ++H++ ++ L+ KD+ +F + K G
Sbjct: 493 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD-G 551
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
IKPD+ YN +I AFC A + EM ++ KP +F ++ GF ++ + +
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 611
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
V MM G V YN I L + RK +A+ +LDEM G+ PN TY+ ++G+
Sbjct: 612 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 671
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A ++ + + GL + Y ++ CK G ++AL KE A+ N
Sbjct: 672 ASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 731
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
L+ G A + EA +L+ +K +
Sbjct: 732 FIYNILIDGWARRGDIWEAADLMQQMKRE 760
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 1/300 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI ++ ++ + +E K + N + + I Y Q + A +E
Sbjct: 382 VTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVRE 441
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + ++ ++ T+ D + VF F K G+ P + TY +I + +
Sbjct: 442 MEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERF-KECGLNPSVITYGCLINLYAKLG 500
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A + EM+ IK N ++ L+ GF K + + + + + + + G+K V +YN
Sbjct: 501 KVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYN 560
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + K A + EM + KP + T+ I+GF + G ++A + +M S
Sbjct: 561 NIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMS 620
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P Y ++ + + E A E G PN T +++ G A +A
Sbjct: 621 GCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKA 680
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV T KEM + + + + F ++ + K+ VF + + G P + TYN
Sbjct: 573 DRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVF-DMMRMSGCIPTVHTYNA 631
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I E A IL EM + PN ++ ++ G+ + G
Sbjct: 632 LILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEG 691
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V Y + + CK + A A+ EM ++ + N+ Y+ I G+ + G+ EA
Sbjct: 692 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAA 751
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+ P+ Y + + K GD + A +E + G PN T +L+ G
Sbjct: 752 DLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGW 811
Query: 367 AGAS 370
A AS
Sbjct: 812 ARAS 815
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI +D Y+ ++ + D + + P+ ++G L+ + K K
Sbjct: 446 GIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKA 505
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + ME G+K + Y++ I+ KL+ A A A+ ++++ G+KP+ V Y++ I
Sbjct: 506 LEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 565
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G + A + M P + + +++ + G+ + AL G +P
Sbjct: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT 625
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T +L+ GL K+ +A++++
Sbjct: 626 VHTYNALILGLVEKRKMEKAEQIL 649
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY ++KA C+S SA ++ EM ++I N + L+ G+ + +
Sbjct: 691 GLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEA 750
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M+R G++ + Y I++ K A ++EM S G+KPN TY+ I G
Sbjct: 751 ADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLING 810
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM------CKGGDYETALGFCKESI 348
+ + E+A + M SGL P+ +VY ++ + G Y L C+E +
Sbjct: 811 WARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMV 869
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 7/291 (2%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHS----IILYGQANMTE--HAVRTFKEMDEHKLRHS 144
F G+ + + T ++Q +R + I++G A E A+ F M +
Sbjct: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT 625
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +NAL+L L + ++ +++ E G+ P+ TY ++ + D+ A++
Sbjct: 626 VHTYNALILGLVEKRKMEKAEQILDEMTLA-GVSPNEHTYTTIMHGYASLGDTGKAFTYF 684
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
++ + ++ + ++ AL+ K + + V + M + +YN+ I +
Sbjct: 685 TKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARR 744
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA L+ +M +G++P+ TY+ FI K G+ + A K M + G+ PN Y
Sbjct: 745 GDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTY 804
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
T++ + E AL +E G P+ L+T L + V+
Sbjct: 805 TTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHG 855
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 151/366 (41%), Gaps = 11/366 (3%)
Query: 39 KDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
+DK R L + E+ PE + +A R + + +N + + +
Sbjct: 278 RDKARNGLRKV-IETEPENWQAV--VSAFERIKKPSRKEYGLMVNYYTRRGDMHRARETF 334
Query: 99 EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
E+++ R + + + I Y E A+ ++M E + S+ ++ L+
Sbjct: 335 EKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKT 394
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + F E + + + Y +I A+C+ + A +++ EM+ + I
Sbjct: 395 GNAESADHWFQEAKEKHS-SLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDI 453
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ++ G+ D +K L + ER+ G+ V Y I+ KL K ++A +
Sbjct: 454 YHTMMDGY---TMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSK 510
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM G+K N TYS I GF K ++ A + + G+ P+ +Y ++ C G
Sbjct: 511 EMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMG 570
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWN 394
+ A+ KE + P T ++ G A ++ +A ++ +++ V T+N
Sbjct: 571 KMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYN 630
Query: 395 EIEAGL 400
+ GL
Sbjct: 631 ALILGL 636
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 1/276 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ G + T A F+E+ E+ L A+NALL K+ + V E K G
Sbjct: 283 ILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKA-G 341
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD TY+ +I + + SA +L EM+ +++PN+ F ++A + + +++
Sbjct: 342 VKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSF 401
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+VL+ M+ G++ YNV I + K A A + MLS+G+ P+ VT++ I
Sbjct: 402 QVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCH 461
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G + A++ + M G SP + Y M+ M + +E F + ++G PN
Sbjct: 462 CKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNS 521
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
T +LV + + S+A E + ++K K T
Sbjct: 522 ITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTST 557
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E+ +PD E+ ++ I +Y A E A KEM+ ++ + F+ +L
Sbjct: 337 MEKAGVKPD---EQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRD 393
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
++++ +V + K+ G++PD YN +I F + + A + M + I P+
Sbjct: 394 KGEWQKSFQVLKDM-KSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIV 452
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ K +++ ++ M++ G ++ YN+ I+S+ + ++ + A L +M
Sbjct: 453 TWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKM 512
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
S+G++PNS+TY+ + + K G F +A + ++ ++G P S++Y ++ + G
Sbjct: 513 QSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLS 572
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
E A+ + +G P+ + SL+ + +EA ++ +KE
Sbjct: 573 ELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 619
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 136/295 (46%), Gaps = 9/295 (3%)
Query: 104 RPDLQNERFHAHSIILY-GQANMTEHAV--RTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+PD N SII Y ++N + + + + E++ K+ N +++ + A D
Sbjct: 201 QPDFVN----YSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGD 256
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
R F+ ++ G+ P T VI A S + A ++ E+ ++P ++
Sbjct: 257 PTRAMR-FLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYN 315
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
AL+ G+ + +D V+ ME+ G+K Y++ I + A+ +L EM +
Sbjct: 316 ALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEAS 375
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
++PNS +S + + G ++++ + + M +SG+ P+ Y M+ K + A
Sbjct: 376 NVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHA 435
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ + +++G P+ T +L+ + + A+EL ++++ ++ + T+N
Sbjct: 436 MATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYN 490
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 117/267 (43%), Gaps = 11/267 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
++L+ +++ + P+ H +++ I+ + N + E + + PD+
Sbjct: 402 QVLKDMKSSGVQPDRHF----YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTL 457
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
G+ +M E F EM + + +N ++ ++ + +++V F+ +
Sbjct: 458 IDCHCKSGRHDMAEE---LFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVT-AFLSKMQ 513
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G++P+ TY ++ + +S S A L + KP ++ + AL+ + + E
Sbjct: 514 SQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSE 573
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
++M G+ + N I++ + R+ AEA A+L M ++P+ VTY+ +
Sbjct: 574 LAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLM 633
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ F++ Y M SG +P+
Sbjct: 634 KALIRVEKFQKVPAVYEEMVASGCTPD 660
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA--KKFYRI 311
YN I + + +A L+ +M G +P+ V YS I + + +K Y
Sbjct: 172 YNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAE 231
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + + + ++ K GD A+ F + + G P +T+ +++ L + +
Sbjct: 232 IETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGR 291
Query: 372 VSEAKELIGLVKE 384
EA+ L ++E
Sbjct: 292 THEAEALFEEIRE 304
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 145/319 (45%), Gaps = 13/319 (4%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPD--LQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
A+ +L AN + + + PD L HA L Q +TE A EM
Sbjct: 184 ALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHA----LCDQGGVTE-AATLLNEMLL 238
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
V F+ ++ + +E R ++ T G P + TY +++ C +
Sbjct: 239 MGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFLLQGLCRVRQAD 297
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A ++L + + N F ++ G E K + ++ + M G + Y++ +
Sbjct: 298 EARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILM 353
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
H LCKL + + A LL EM KG PN VTY+ ++ FCK+G +++ + MS GL+
Sbjct: 354 HGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
NS Y M+Y +CK G + A+G +E ++G P+ + +++ L ++ EA+ +
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473
Query: 379 I-GLVKEKFTKNVDTWNEI 396
L++E N T+N I
Sbjct: 474 FENLLEEGVVANGITYNTI 492
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD TY+ ++ C+ SSA +L EM++K PN ++ ++ F K ++D
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G+ YN I++LCK + EA L+ EM S+G P+ +Y+ IY
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C + EEA+ + + G+ N Y T+++ + + G ++ A+ KE I G +
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ L+ + V + L+ + EK K
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 553
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P++ TY V+ +FC++ ++L EM K + N+ + ++ K+ + ++
Sbjct: 376 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 435
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M G + YN I+ LC + EA+ + + +L +G+ N +TY+ I+
Sbjct: 436 MGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHA 495
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+DG +++A + + M G S + Y ++ MCK G+ + +L +E KG PN
Sbjct: 496 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 555
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ L++ L +V +A EL ++ + ++ T+N + GL
Sbjct: 556 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 113 HAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +SI+++G + AVR +EM++ +V + +L + + + R +E
Sbjct: 347 HTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT-RALLE 405
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G+ + YN +I A C+ A ++ EM + P+ S+ ++ E
Sbjct: 406 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ E+ + + + G+ + YN IH+L + + +A L EM+ G + V+Y+
Sbjct: 466 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 525
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I CKDGN + + M+ G+ PN+ Y ++ +CK AL K+ + +
Sbjct: 526 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
G P+ T +L+ GL + A L+ L E ++ T+N
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 630
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 135/299 (45%), Gaps = 11/299 (3%)
Query: 69 PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM 125
P++H +SI ++ L + + + L E++ + P++ HS + + M
Sbjct: 344 PDAH----TYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHS---FCKNGM 396
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ +EM L + +N ++ AL E + E ++ G PD+ +YN
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYN 455
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A + + + + N ++ ++ ++ +++D ++ + M +
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 515
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I ++CK + LL+EM KG+KPN+V+Y+ I CK+ +A
Sbjct: 516 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 575
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ + M N GL+P+ Y T++ +CK G AL ++ + P+ T L++
Sbjct: 576 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M V + LL L + E + + P+ ++ +N VI
Sbjct: 264 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-----NVVLFNTVI 318
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ A + M K +P+A ++ L+ G K + ++L+ ME+ G
Sbjct: 319 GGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFA 378
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y + +HS CK + +ALL+EM +KG+ NS Y+ IY CKDG +EA
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + G +P+ Y T++Y +C E A + + +G V N T +++ L
Sbjct: 439 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 498
Query: 369 ASK----VSEAKELI 379
+ V AKE+I
Sbjct: 499 DGRWQDAVRLAKEMI 513
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYK 228
+ P+ +G++P +YN V+ + + A ++ M R + P +FG +
Sbjct: 128 QLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCR 187
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ + +L+ M R+G +Y IH+LC EA LL+EML G + T
Sbjct: 188 LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
+ + G C G EA + M G P Y ++ +C+ + A
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM----- 302
Query: 349 AKGWVP--NFTTMKSLVTGLAGASKVSEAKEL 378
G VP N +++ G K++EA EL
Sbjct: 303 -LGRVPELNVVLFNTVIGGCLAEGKLAEATEL 333
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 1/258 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++I ++ + ++ LEE+ + N + + I + + A+ +E
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++N ++ L + +E + +F E G+ + TYN +I A
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF-ENLLEEGVVANGITYNTIIHALLRDG 500
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM + S+ L+ K+ + +L+ M G+K YN
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYN 560
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I LCK R+ +A L +ML++G+ P+ VTY+ I G CK G A + N
Sbjct: 561 ILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620
Query: 316 GLSPNSSVYFTMVYFMCK 333
+ P+ Y ++ + CK
Sbjct: 621 NVHPDIITYNILISWHCK 638
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 31/243 (12%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++N +L L A + + ++ + P T+ +A C ++ A ++L
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRG 200
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R P+A + ++ + + +L M G + V+ ++ + +C L +
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK---------------------------- 298
EA L+D M++KG P +TY + G C+
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGG 320
Query: 299 ---DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+G EA + Y M G P++ Y +++ +CK G +A+ +E KG+ PN
Sbjct: 321 CLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPN 380
Query: 356 FTT 358
T
Sbjct: 381 VVT 383
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR--VFIEFPKTYGIKPDLDTY 184
+ AVR KEM H V ++N L+ A+ KD V R V +E GIKP+ +Y
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAM--CKD-GNVDRSLVLLEEMAEKGIKPNNVSY 559
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ A + +M + + P+ ++ L+ G K +L+ +
Sbjct: 560 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN 619
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ + YN+ I CK+R +A LL+ ++
Sbjct: 620 ENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 163/358 (45%), Gaps = 3/358 (0%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
L LLK+E NP L I +A P F + +L + + + ++ ++ +
Sbjct: 13 VLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQ 72
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKE 163
+E +I Y + +M + A+ F+ M D + +FN++L A + ++E
Sbjct: 73 RCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWRE 132
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ F F +T G+ P+L TYN +IK C+ +L M + P+ S+G L+
Sbjct: 133 AELFFTYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI 191
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-M 282
K D ++ M G+ V YN+ I + +A + +L++ +
Sbjct: 192 NALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ TY+ I G CK G +E+ + + M + SP+ + +M++ + K G++ A
Sbjct: 252 YPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEK 311
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+E I G P+ T ++++GL K+++ EL ++ + N+ ++N + GL
Sbjct: 312 VFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGL 369
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 7/304 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR-PDLQNERFHAHSIILYG--QANMTEHAV 130
D + + IN L + Y N + LEE + DL A+S +++G + M E AV
Sbjct: 393 DSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT---FAYSSMVHGLCKKGMLEQAV 449
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M +++ + + FN+L+ A +E V E K+ P + +YN +I
Sbjct: 450 ELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM-KSKDCAPTVVSYNTIING 508
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C++ S AY L EM + +KP+ ++ L+ G + EK + + +K
Sbjct: 509 LCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ M+N+ IH LC +K A + +M P+ VT++ + G K G+ EA K +
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWD 628
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ +GL P+ Y +C A+ F +++ +G +PN T LV +
Sbjct: 629 RILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688
Query: 371 KVSE 374
+ E
Sbjct: 689 PLME 692
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 148/337 (43%), Gaps = 13/337 (3%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMT 126
E D FS I+ LS+A FN + +E+ PD++ + G+ N
Sbjct: 285 EKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLN-- 342
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR--VFIEFPKTYGIKPDLDTY 184
+ M ++ + V ++N L+ L D K+V++ + + G+K D TY
Sbjct: 343 -KCFELWNVMSKNNCCNIV-SYNMLIQGLL---DNKKVEQAICYWQLLHERGLKADSTTY 397
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I C++ + A IL E + + + ++ ++V G K+ E +++ M++
Sbjct: 398 GLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKK 457
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
K ++N I+ + K EA ++L EM SK P V+Y+ I G CK F +
Sbjct: 458 NRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSD 517
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M GL P+ Y ++ +C+G + AL + I K P+ ++
Sbjct: 518 AYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIH 577
Query: 365 GLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
GL A KV A E+ +++ ++ T N I GL
Sbjct: 578 GLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 180 DLDT--YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
DLDT Y+ ++ C+ A ++ +M + K N+ F +L+ G+ + K E+
Sbjct: 426 DLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAIS 485
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
VL+ M+ V YN I+ LCK + ++A L EML +G+KP+ +TYS I G C
Sbjct: 486 VLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLC 545
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ + A + N L P+ ++ +++ +C + AL + VP+
Sbjct: 546 RGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLV 605
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI-EAGL 400
T +++ GL A EA ++ W+ I EAGL
Sbjct: 606 THNTIMEGLYKAGDCVEALKI--------------WDRILEAGL 635
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 16/319 (5%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER----------FHAHSIILYG 121
H D +A +N++S +G+ + E TR +Q R +S I+Y
Sbjct: 72 HDDVIAKGFQLNQVSYGTLIDGLCKAGE---TRAAMQVLRNIDGLLVQPNVVMYSTIIYS 128
Query: 122 --QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + A + +M ++ V +N L+ I KE +F + IKP
Sbjct: 129 LCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQM-LLKNIKP 187
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ T+N ++ C+ + A ++LA M ++S+ P+ ++ +L+ G++ ++ V
Sbjct: 188 DIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVF 247
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M R G+ V Y+V I+ LCK + EA LL EM SK M PN+VTYS I G K
Sbjct: 248 NTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKS 307
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +A M N G + Y +++ +CK + A+ + +G P+ T
Sbjct: 308 GRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTY 367
Query: 360 KSLVTGLAGASKVSEAKEL 378
LV GL ++ +A+E+
Sbjct: 368 TILVDGLCKNGRLKDAQEV 386
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + V +N+L+ + K + VF + G+ PD+ +Y+ +I C++
Sbjct: 215 MIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARR-GVTPDVHSYSVMINGLCKTK 273
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++L EM KS+ PN ++ +L+ G +K + D ++ M G + V YN
Sbjct: 274 MVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYN 333
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI---- 311
+ +LCK + +A LL ++ +G++P+ TY+ + G CK+G ++A++ Y+I
Sbjct: 334 SLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIK 393
Query: 312 -----------------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
M ++G +PN + ++ + + + A+ +E IA+G +
Sbjct: 394 GYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 100/203 (49%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P++ Y+ +I + C+ A+ + ++M K I P+ ++ L+ G + ++
Sbjct: 115 VQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAV 174
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M +K + +N+ + LCK + +A+ +L M+ + + P+ +TY+ + G+
Sbjct: 175 GLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGY 234
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+A + M+ G++P+ Y M+ +CK + A+ KE +K PN
Sbjct: 235 FLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNT 294
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T SL+ GL + ++ +A +L+
Sbjct: 295 VTYSSLIDGLHKSGRIFDAWDLV 317
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + + ++ + + + + S+ +M+ + I+ + + LV F + +KV
Sbjct: 6 PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65
Query: 239 LQMMERY------GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + + G + Y I LCK + A +L + ++PN V YS
Sbjct: 66 KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
IY CKD +A Y M +SP+ Y T++Y G + A+G + + K
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
P+ T LV GL ++ +A+ ++ ++K+ +V T+N + G
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDG 233
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF-- 168
H++S+++ G + M + AV KEM + + +++L+ L + R+F
Sbjct: 260 HSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL------HKSGRIFDA 313
Query: 169 ---IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+ G D+ TYN ++ A C++ A ++L ++ + I+P+ ++ LV G
Sbjct: 314 WDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDG 373
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + +D +V Q++ G S+++ +A +LL +M G PN
Sbjct: 374 LCKNGRLKDAQEVYQILLIKGYHLD-SLFD-------------KALSLLSKMEDNGCTPN 419
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
VT+ I ++ ++A + R M GL
Sbjct: 420 PVTFEILIRALFENDMNDKAVELLREMIARGL 451
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A++ F + + V +N L+ L E +F K +G++PD TY
Sbjct: 166 EALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYTVF 224
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C++ A +L +MD K P+ S A++ G KE++ ++ +L ME G
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK---DGNFEE 304
+N I C+ K +A EML +G+KP VTY+ + G CK +G +E
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M G P+ Y ++ + K G + A AKG +PN T SL++
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404
Query: 365 GLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEI 396
GL G KV EA EL + +V++ + T+ I
Sbjct: 405 GLCGLEKVDEALELFVAMVEKGCVPDTITYGTI 437
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 142/321 (44%), Gaps = 44/321 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A+ + A R + M L V +N+L+ L E + + ++ G P
Sbjct: 90 FCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD----KGFSP 145
Query: 180 DLDTYNRVIKAFC-ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
++ TY+ +I C E S A + + ++ +P ++ L+ G KE++ + ++
Sbjct: 146 NVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFEL 205
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ ++G++ Y V I LCK + +A +L +M KG P+ V+++ I G CK
Sbjct: 206 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 265
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL----------------- 341
+ +EA+ M G SPN+ + T++ C+ G ++ A+
Sbjct: 266 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 325
Query: 342 ------GFCKES---------------IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
G CK I KG VP+ T +L+ GL A K+ +A+ L+G
Sbjct: 326 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 385
Query: 381 LVKEK-FTKNVDTWNEIEAGL 400
++ K NV T+N + +GL
Sbjct: 386 AMEAKGCIPNVYTYNSLISGL 406
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ ++N VI C+ A +L+ M+ K PNA SF L+ G + K++
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLR---KCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ M + G+K V YN+ + LCK R + EA L D M+ KG P+ VTYS
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 367
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G K G ++A++ M G PN Y +++ +C + AL + KG
Sbjct: 368 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGC 427
Query: 353 VPNFTTMKSLVT 364
VP+ T ++++
Sbjct: 428 VPDTITYGTIIS 439
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G P+ TYN ++ C S A ++ M + P+ ++ L+ GF K +
Sbjct: 2 RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGEL 61
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ K+ + G V YN I+ CK K EA+ +L M+S+ + P+ VTY+
Sbjct: 62 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG-GDYETALGFCKESIAKG 351
+ G CK+G +EA+ ++ + G SPN Y T++ +C+ AL + +G
Sbjct: 122 VNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG 178
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ P T L+ GL +V+EA EL GLVK + T+ GL
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 228
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + PN ++ AL++G + D + + M + G V YN +H CK+ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA + D + +G P+ VTY+ I GFCK +EA++ + M + L P+ Y +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK-VSEAKELIG-LVKE 384
+V +CK G + A + KG+ PN T +L++GL + VSEA +L G ++K+
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 385 KFTKNVDTWNEIEAGL 400
+ V T+N + GL
Sbjct: 178 GYEPEVPTYNILIDGL 193
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 4/223 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +++ I+ L +A L+++ + + + H I + + A
Sbjct: 217 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 276
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M+ + +FN L+ A +K+ F E K G+KP + TYN ++ C+
Sbjct: 277 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR-GVKPTVVTYNILVDGLCK 335
Query: 194 SSDSS---SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ A ++ M K P+ ++ AL+ G K K +D ++L ME G
Sbjct: 336 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 395
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
V YN I LC L K EA L M+ KG P+++TY I
Sbjct: 396 VYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 15/335 (4%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNE-RFHAHSIILYGQANMTEHAVR 131
LD A+SI I + + N + LEE+K R + +E F + + Q NM E A+R
Sbjct: 253 LDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE-ALR 311
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDY---KEVKRVFIEFPKTY--GIKPDLDTYNR 186
+EM + G L++A ++ K Y + F K G+ P+ TY+
Sbjct: 312 LKEEM------INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 365
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C S + A + +M I P+ + +L+ G+ K +E+ +K+ G
Sbjct: 366 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + + YN+ + LCK K EA +LLD M+++GM PN V+Y+ I G C+ GN + A
Sbjct: 426 V-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 484
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M L PN Y ++ K GD E AL + ++ P T +++ GL
Sbjct: 485 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544
Query: 367 AGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
++SEA++ L ++E F + T+N I G
Sbjct: 545 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 579
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 4/288 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+SI++ G + +E A+ F +M + + FN ++ L E + F
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 561
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G P TYN ++ F + + SA ++ EM + PN ++ +L+ GF K +
Sbjct: 562 EE-GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ K M G++ V+ Y+ I CK R A+ L E+L G+ PN + Y+
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GF N E A +Y+ M N + + Y T++ + K G A E ++KG
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
VP+ T LV GL ++ A++++ + ++ T +V +N + AG
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 788
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ +YN +I C + A S+ ++M + +KPN ++ L+ G +K+ E
Sbjct: 459 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 518
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M + +N I+ LCK+ + +EA+ L L +G P+ +TY+ + G
Sbjct: 519 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDG 578
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K+GN + A YR M G+SPN Y +++ CK + AL E KG +
Sbjct: 579 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 638
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T +L+ G + A++L L++ + N +N + +G
Sbjct: 639 VTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 4/273 (1%)
Query: 115 HSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S+++ G N E A + +M + + SV N+LL A ++E ++F E
Sbjct: 363 YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV 422
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ ++ TYN ++ C+ A S+L M + + PN S+ ++ G ++
Sbjct: 423 DC-GVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 480
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + V M +K V Y++ I K +A L D+MLS + P T++
Sbjct: 481 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 540
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CK G EA+ + G P+ Y ++V K G+ ++AL +E G
Sbjct: 541 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 600
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
PN T SL+ G ++++ A + ++EK
Sbjct: 601 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 12/300 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQN--ERFHAHSIILYG--------QANM 125
L+ +IA + NG+ + + + R L+N E S + Y + N+
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ ++EM E + +V + +L+ + + E + G++ D+ Y+
Sbjct: 586 -DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM-REKGLELDVTAYS 643
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ D SA + E+ + PN + ++++GF E + M
Sbjct: 644 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 703
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + Y I L K + A L EMLSKG+ P+ +T+ + G C G E A
Sbjct: 704 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 763
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+K M ++P+ +Y T++ + G+ + A E + +G VP+ T L+ G
Sbjct: 764 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ ++N + A++T EM E L V A++AL+ +D + + +F E + G+ P
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV-GLSP 672
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ YN +I F + ++ +A +M I + ++ L+ G KE + + +
Sbjct: 673 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ + ++V ++ LC + A+ +L+EM K M P+ + Y+ I G+ ++
Sbjct: 733 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 792
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
GN +EA + M + GL P+ Y ++ KG
Sbjct: 793 GNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 827
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+K D Y+ +I+A C+ +S+ +L EM + P+ ++F +++ +
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ ++ + M G + + + C A L +++ G+ PN VTYS
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C GN E+A + Y M +G+ P+ +++ K +E A E++ G
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG- 425
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
V N T +++ L K+ EA L+ +V + NV ++N++ G
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 473
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 1/275 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +AN E+A+ F M + V N LL AL E++ ++ + GI
Sbjct: 160 YIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM-VLRGIYG 218
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T + +++A + A E + +K +A ++ ++ K+ ++L
Sbjct: 219 DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 278
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ G + + I + EA L +EM++ G N V + + G+C
Sbjct: 279 EEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 338
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN + A + ++ GL PN Y ++ C G+ E A + G P+ +
Sbjct: 339 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
SL+ G A EA +L + N+ T+N
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN 433
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 20/278 (7%)
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIAKD 160
+T P QN A L N + A+R FK + + V A+ LL
Sbjct: 54 ETTPLSQNHVIDA----LLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLL-------- 101
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ + P+T+G L NR + + S ++ R + + F
Sbjct: 102 -----HILMRSPETHGHARKL--LNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFN 154
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ + + + E+ M + V N+ + +L + E + L ++M+ +
Sbjct: 155 YLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLR 214
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+ + T + K+G EEA++++R G+ ++ Y ++ +CK +
Sbjct: 215 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 274
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
L +E +GWVP+ T S++ + EA L
Sbjct: 275 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRL 312
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G+ PD +Y +I A C+ A +M + + PN F +LV G +K+
Sbjct: 57 RQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKW 116
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E V ++ M G+ + +N + +LCK + E + L+D + G++P+ ++Y+
Sbjct: 117 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 176
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C G +EA K M + GL PNS Y T+++ CK G ++A ++ ++ G
Sbjct: 177 IDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGI 236
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
P T +++ GL + SEAKEL + ++ + T+N I GL
Sbjct: 237 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGL 285
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 116 SIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
S ++YG ++ E F EM + ++ FN +L L E +R+ ++ +
Sbjct: 104 SSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL-VDSIE 162
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G++PD+ +YN +I C + A +L M +KPN+ S+ L+ G+ K + +
Sbjct: 163 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRID 222
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + M G+ GV YN +H L + ++ +EAK L M++ G K TY+ +
Sbjct: 223 SAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTIL 282
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G CK +EA K ++ + + GL N + M+ + KGG E A+ A G V
Sbjct: 283 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 342
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
P+ T + + L + E L +++ T
Sbjct: 343 PDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGT 376
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M + A+ F +M +H L ++ AL+ AL + + F + G+ P
Sbjct: 40 YAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE-GVTP 98
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ ++ ++ C + EM I PN F ++ KE + + +++
Sbjct: 99 NIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 158
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+E G++ V YN I C EA LL+ M+S G+KPNS +Y+ ++G+CK
Sbjct: 159 DSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKA 218
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + A +R M ++G++P Y T+++ + + + A I G T
Sbjct: 219 GRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTY 278
Query: 360 KSLVTGLAGASKVSEA 375
+++ GL ++ V EA
Sbjct: 279 NTILNGLCKSNCVDEA 294
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R ++ +R V ++N L+ +A E ++ +E + G+KP+ +YN ++
Sbjct: 156 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL-LEGMVSVGLKPNSFSYNTLLHG 214
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ SAYS+ +M I P ++ ++ G ++ +++ + ++ M G K G
Sbjct: 215 YCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWG 274
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN ++ LCK EA + + SKG++ N +T++ I K G E+A +
Sbjct: 275 IYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 334
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ +GL P+ Y + + + G E G PN + +LV L
Sbjct: 335 AIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 394
Query: 371 KVSEAKELIGLVKEK 385
+S A + + E+
Sbjct: 395 DISRAGAYLSKLDER 409
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
S + +L M I PN F + + K + + M ++G+ Y
Sbjct: 12 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGAL 71
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I +LCKL + +A+ ++M+++G+ PN V +S +YG C +E+ ++ + M N G+
Sbjct: 72 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGI 131
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN + T++ +CK G G P+ + +L+ G A + EA +
Sbjct: 132 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 191
Query: 378 LI-GLVKEKFTKNVDTWNEIEAG 399
L+ G+V N ++N + G
Sbjct: 192 LLEGMVSVGLKPNSFSYNTLLHG 214
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ G+ + +++ +L +M G+ ++N+ + K +A + ++M G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P++V+Y I CK G ++A+ + M N G++PN V+ ++VY +C +E
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E + G PN +++ L +V E + L+
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 158
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 8/245 (3%)
Query: 98 LEELKTRPDL--QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+E + RPD+ N H + A + A + + M L+ + ++N LL
Sbjct: 161 IECMGVRPDVISYNTLIDGHCL-----AGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGY 215
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A +F + GI P + TYN ++ ++ S A + M K
Sbjct: 216 CKAGRIDSAYSLFRKMLSN-GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWG 274
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ ++ G K ++ K+ Q + G++ + + + I +L K + +A L
Sbjct: 275 IYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 334
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ + G+ P+ VTY ++G+ EE + M +G +PNS + +V + G
Sbjct: 335 AIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 394
Query: 336 DYETA 340
D A
Sbjct: 395 DISRA 399
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 4/289 (1%)
Query: 114 AHSIILYGQANMTEH--AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++ ILYG + ++ A EM + L + +N LL+ + + E + +F E
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G+ PDL +++ +I + A EM+R I P+ + L+ GF +
Sbjct: 389 SRR-GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
D K+ M G V YN ++ LCK + A+A L +EM+ +GM P+ T++
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G+CKDGN ++A + M + L P+ Y T++ CK G+ A + I K
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
+P+ + +++ G + + EA L + EK + N+ T N + G
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A + E+ + +V N ++ AL + ++ V F+ + G+ D+ TYN
Sbjct: 238 VDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVM-FFLSDMEGKGVFADIVTYN 296
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A+C A+ +L + ++P ++ A++ G K KY+ VL M +
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ + YN + +C+ EA+ + DEM +G+ P+ V++S I ++G+ +A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+R M SG+ P++ +Y ++ C+ G AL E +A+G + T + + G
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476
Query: 366 LAGASKVSEAKELIGLVKEK 385
L ++A L + E+
Sbjct: 477 LCKKKMFADADMLFNEMVER 496
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 12/333 (3%)
Query: 58 ILEICRAAALTPESHL-----------DRLAFSIAINKLSEANYFNGISQYLEELKTRPD 106
++EICR + + D ++FS I L+ + + E++
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
+ + + I + + A++ EM V +N L L K + +
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+F E + G+ PD T+ +I+ +C+ + A ++ M R ++KP+ ++ L+ GF
Sbjct: 489 LFNEMVER-GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + ++ M R + Y ++ C EA L D+ML KG++PN
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VT + I G+C+ G+ +A ++ M ++G+ P+S Y T++ K + E A E
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+G N T ++ G K+ EA++++
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 144 SVGAFNALLLALTI-AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
SVG LL+ + AK +E F + + G+ ++ N+++ + A+
Sbjct: 185 SVGLIYDLLVRTYVQAKKLREGSEAF-QILRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
I E+ R I+ N + +V K+ K+E+V L ME G+ + + YN I++ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ EA LL+ S+GM+P +TY+ +YG CK G ++ AK M GL+PN++
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y T++ +C+ + A E +G +P+ + SL+ LA + +A
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P+L T N +IK +C S D AY L++M I P++ S+ L+ G+ KE E
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ ME+ G++ + YN+ ++ C K EA+ +L +M+ G+ P+ TYS I G
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPN 320
N +EA +F+ M GL P+
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ TYN + C+ + A + EM + + P+ +F L+ G+ K+ +
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R +K YN I CK + AK L D+M+ K + P+ ++Y + G
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G EA M G+ PN T++ C+ GD A + + I+ G +P+
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ +L+ G + + +A LI + K N+ T+N I G
Sbjct: 642 SFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA F+ + + S+ A N LL L ++ E + GI+
Sbjct: 197 YVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG-GIEL 255
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ T N ++ A C+ + L++M+ K + + ++ L+ + +E E+ ++L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
GM+ G+ YN ++ LCK+ K AK +L EML G+ PN+ TY+ + C+
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N EA++ + MS G+ P+ + +++ + + G AL +E G VP+
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ G +S+A ++
Sbjct: 436 TILIDGFCRNGALSDALKM 454
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 3/252 (1%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M A F EM E + F L+ + + +F +T +KPD TY
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTY 540
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQMME 243
N +I FC++ + A + +M RK I P+ S+G ++ GF E +N QM+E
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G++ + N I C+ +A L +M+S G+ P+S +Y+ I G+ K+ N E
Sbjct: 601 K-GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M GL N Y ++ C G + A ++ I G P+ T SL+
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719
Query: 364 TGLAGASKVSEA 375
G + EA
Sbjct: 720 NGHVSQDNMKEA 731
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIIL 119
R L +D + ++ +N L + F E+ R PD F+ + ++
Sbjct: 455 RDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD-----FYTFTTLI 509
Query: 120 YG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
G NM + A+ F+ M L+ +N L+ A + K ++ + +
Sbjct: 510 RGYCKDGNM-DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK-D 567
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PD +Y V+ FC S A ++ +M K I+PN + L+ G+ +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ L M G+ YN I K +A L++EM +G++ N +TY+ + GF
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G +EA++ R M G++P+ + Y +++ + + A F E + +G VP+
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 184 YNRVIKAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
Y+ +++ + ++ + S A+ IL RK + + ++ L+ G + + ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILR---RKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+ R G++ V N+ +++LCK RK L +M KG+ + VTY+ I +C++G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EEA + S+ G+ P Y ++Y +CK G Y+ A E + G PN T
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 361 SLVTGLAGASKVSEAKEL 378
+L+ + + EA+E+
Sbjct: 367 TLLVEICRRDNILEAQEI 384
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ LV + + +K + ++ Q++ R G+ ++ N + L + A + E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G++ N T + + CKD FE F M G+ + Y T++ C+ G E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEI 396
A ++G P T +++ GL K AK+ LI +++ T N T+N +
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ A+ F+ EHKLR +L L K +K V + E + G
Sbjct: 76 YLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC-GYPA 134
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L +N ++ FC+ + A S+ + + ++P+ SF L+ G+ + + K+
Sbjct: 135 SLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLK 194
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G++ V Y+V I+ LCK K EA L +EML KG+ PN VT++ I G CK+
Sbjct: 195 NAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + A + Y+ M + P+ Y T++Y +CK GD + A E KG P+ T
Sbjct: 255 GKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITY 314
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
+L+ G + A EL +VKE + + + +GL Q
Sbjct: 315 TTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQ 358
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D + ++ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S + A + EM K + PN +F L+ G K K + + + M
Sbjct: 214 NGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFL 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A+ LLDEM KG+KP+ +TY+ I G CK+G+ + A +
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFEL 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 334 RETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 369 ASKVSEAKELI 379
V A +L+
Sbjct: 394 KEDVKTAAKLL 404
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PDL TYN +I C+ D A +L EM K +KP+ ++ L+ G KE + ++
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFEL 333
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + ++ Y I LC+ + +A+ +L EMLS G+KP++ TY+ I FCK
Sbjct: 334 RETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 299 DGNFEEAKKFYRIMSNSGLSP 319
+ + A K + M G P
Sbjct: 394 KEDVKTAAKLLKEMQRQGHVP 414
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%)
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
DS+SA + + + + F L+ + + D + ++ + ++
Sbjct: 46 DSASAVFAAILETKGTQRSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCR 105
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ L KL+ E+L G + ++ ++ FCK+G A+ + ++
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKW 165
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ + T++ + GD + A G P+ T L+ GL SK++EA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEA 225
Query: 376 KEL 378
+L
Sbjct: 226 NDL 228
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEH 128
D + ++ I+ L +A + G+ Q++ + +PD+ ++ I+ G +A +
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV-----TYNTIIDGLCKAQAVDR 322
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + M + ++ + +N L+ ++KEV R E G+ PD+ TY+ ++
Sbjct: 323 ADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM-YARGLDPDVVTYSLLL 381
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ + A I M RK IKPN + +G L+ G+ D+ +L +M G+
Sbjct: 382 DYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS 441
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
++N+ + + K EA + M G+ P+ VTY I CK G ++A
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M N G++PNS V+ ++VY +C +E A E +G PN +++ L
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN 561
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+V A+ LI + + NV ++N + G
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 2/254 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN +L A E +F + +G+ PD+ TY +I A C+ A +M
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQ-HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ PN+ F +LV G +++E ++ M G++ V +N + +LC +
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A+ L+D M G++PN ++Y+ I G C G +EA + +M + GL P+ Y T+
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKF 386
+ CK G + A +E + KG P T +++ GL + SEAKEL + ++K
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685
Query: 387 TKNVDTWNEIEAGL 400
++ T+N I GL
Sbjct: 686 QWDIYTYNIILNGL 699
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 59/381 (15%)
Query: 47 TLLKSESNPEKI---LEICRAAA------LTPESHLDRLAFSIAINKLSEANYFN---GI 94
TLLK N +++ LE+ A TP + + ++ I+ L +A + G+
Sbjct: 166 TLLKGLCNEKRVEEALELLHTMAEDGGGNCTP----NVVTYNTIIDGLCKAQAVDRAEGV 221
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
Q++ + + D+ +S I+ G +A + A + M + ++ V +N ++
Sbjct: 222 LQHMIDKGVKLDVV-----TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 276
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
L A+ + V ++ G+KPD+ TYN +I C++ A +L M K +
Sbjct: 277 DGLCKAQAVDRAEGV-LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDV 335
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ ++ L+ G+ ++++V + L+ M G+ V Y++ + LCK KC EA+
Sbjct: 336 KPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARK 395
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGN------------------------------- 301
+ M+ KG+KPN Y ++G+ G
Sbjct: 396 IFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYA 455
Query: 302 ----FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+EA + MS GLSP+ Y ++ +CK G + A+ + I G PN
Sbjct: 456 KKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSV 515
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
SLV GL + +A+EL
Sbjct: 516 VFNSLVYGLCTVDRWEKAEEL 536
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+K D+ TY+ +I C++ A +L M K +KP+ ++ ++ G K + +
Sbjct: 229 GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 288
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VLQ M G+K V YN I LCK + A +L M+ K +KP+ TY+ I+G
Sbjct: 289 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHG 348
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G ++E + M GL P+ Y ++ ++CK G A I KG PN
Sbjct: 349 YLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN 408
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLV 382
T L+ G A +++ +L+ L+
Sbjct: 409 VTIYGILLHGYAARGAIADLTDLLDLM 435
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 123/281 (43%), Gaps = 7/281 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F +M + + FN+L+ L +++ + +F E G++P++ +N
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ-GVRPNVVFFN 553
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ C A ++ M+R ++PN S+ L+ G + ++ ++L +M
Sbjct: 554 TIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K + Y+ + CK + A L EML KG+ P +VTYS + G F EA
Sbjct: 614 GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEA 673
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+ Y M SG + Y ++ +CK + A + +K PN T ++
Sbjct: 674 KELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDV 733
Query: 366 LAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGL 400
L + +A +L GLV T + N I+ GL
Sbjct: 734 LFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGL 774
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 131/318 (41%), Gaps = 45/318 (14%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-----TYGIKPDL 181
+ A++ F E+ H SV AFN LL + A+ + F + + ++PDL
Sbjct: 31 DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90
Query: 182 DTY-----------------------------------NRVIKAFCESSDSSSAYSILA- 205
TY N+++ C++ A IL
Sbjct: 91 CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG---MKSGVSMYNVRIHSLC 262
M PN S L+ G E++ E+ ++L M G V YN I LC
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K + A+ +L M+ KG+K + VTYS I G CK + A+ + M + G+ P+
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y T++ +CK + A G + I KG P+ T +++ GL A V A ++ +
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330
Query: 383 KEKFTK-NVDTWNEIEAG 399
+K K ++ T+N + G
Sbjct: 331 IDKDVKPDIQTYNCLIHG 348
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M+ +R +V ++N L+ +A E + ++ + G+KPDL +Y+ ++
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ-LLDVMVSVGLKPDLISYDTLL 626
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ +C++ +AY + EM RK + P A ++ ++ G + ++ + ++ M + G +
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK---------------------------- 280
+ YN+ ++ LCK EA + + SK
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 281 -------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
G+ PN VTY + ++G +E + M SG +P+S
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDS 794
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++ L+ L A + RVF + + + +P + TY ++ C+ A ++L E
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGW-CRPGVHTYTVLLDGLCKVRRVGEAEALLGE 221
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K + PN ++ AL+ G +E +++DV K+L+ ME Y +H LCK K
Sbjct: 222 MVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGK 281
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+L E + KG+ +TY+ I G+CK G+ + A ++M + ++P +
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+++ C GG A+ F + G PN T SL++G + A L+ L++E
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 37/261 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE------ 229
G P+ TYN +I A C+ + + A + L M + P+ ++ L+ G +
Sbjct: 85 GAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAA 144
Query: 230 ---------------EKY---------------EDVNKVLQMMERYGMKSGVSMYNVRIH 259
++Y +D +V M R + GV Y V +
Sbjct: 145 CGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLD 204
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LCK+R+ EA+ALL EM++KG+ PN VTY+ I G C++G F++ K M SP
Sbjct: 205 GLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP 264
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ Y +V+ +CK G E+I KG T +L+ G + A +++
Sbjct: 265 DCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVL 324
Query: 380 GLVKE-KFTKNVDTWNEIEAG 399
L+K + V T+NE+ G
Sbjct: 325 QLMKRNRVNPGVQTFNEVIHG 345
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 155/379 (40%), Gaps = 56/379 (14%)
Query: 58 ILEICRAAALTPESHL------------DRLAFSIAINKLSEANYFNGISQYLEELK--- 102
+L +CRA L L DR +++I I L A + + ++
Sbjct: 132 MLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGW 191
Query: 103 TRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
RP + H ++++L G + A EM + +V +NAL+ L
Sbjct: 192 CRPGV-----HTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246
Query: 161 YKEVKRVF--IEFPK------TY--------------------------GIKPDLDTYNR 186
+ +V ++ +E + TY G+ ++ TYN
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ D +A +L M R + P +F ++ GF K L M G
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N I C + + A LLD M G+ P+ TY+ FI C +G EEA
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + G+ ++ +Y ++V+ C+ GD ++A G ++ ++ +P+ T +L+ GL
Sbjct: 427 SLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGL 486
Query: 367 AGASKVSEAKELIGLVKEK 385
++ A +L+ +K++
Sbjct: 487 CKVKRLDRAIDLLDKMKKQ 505
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 7/306 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++ I L + F+ +++ LE+++ + PD H + +G+ H +
Sbjct: 232 VTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG---HGAKV 288
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
E + V +NAL+ D K V ++ K + P + T+N VI FC
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDV-LQLMKRNRVNPGVQTFNEVIHGFC 347
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A + L +M + PN +F +L++G + + ++L +ME YG+
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + I +LC + EA +L + KG+K ++V Y+ ++G+C+ G+ + A M
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++ P+ Y T++ +CK + A+ + +G P T L+ + K
Sbjct: 468 ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKH 527
Query: 373 SEAKEL 378
++A ++
Sbjct: 528 ADAAKM 533
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 37/261 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYED 234
G+ PD TYN ++ C + ++A + +M R+ + S+ L+ G + +D
Sbjct: 120 GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDD 179
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+V M R + GV Y V + LCK+R+ EA+ALL EM++KG+ PN VTY+ I
Sbjct: 180 ACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIG 239
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK--------------------- 333
G C++G F++ K M SP+ Y +V+ +CK
Sbjct: 240 GLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVAL 299
Query: 334 --------------GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-L 378
GGD + AL + P T ++ G KV +A L
Sbjct: 300 EVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL 359
Query: 379 IGLVKEKFTKNVDTWNEIEAG 399
+ + N T+N + +G
Sbjct: 360 TQMAGAGLSPNTVTFNSLISG 380
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 94 ISQYLEELKTRPDLQ--NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+ Q ++ + P +Q NE H + A+ +M L + FN+L
Sbjct: 323 VLQLMKRNRVNPGVQTFNEVIHG-----FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ + K R ++ + YG+ PD TY I A C+ A+S+ + + K
Sbjct: 378 ISGQCSVGERKIALR-LLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKG 436
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
IK + + +LV G+ + + +++ M V YN I LCK+++ A
Sbjct: 437 IKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAI 496
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
LLD+M +G++P + T++ I D +A K Y M +SG P+ Y
Sbjct: 497 DLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTY 549
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + PN ++ L+ K D L M G+ YN + LC+
Sbjct: 81 MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140
Query: 267 CAEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
A A L +M + G + +Y+ I G C G ++A + + MS P Y
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200
Query: 326 TMVYFMCK---GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
++ +CK G+ E LG E + KG VPN T +L+ GL + + +L+ +
Sbjct: 201 VLLDGLCKVRRVGEAEALLG---EMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257
Query: 383 K-EKFTKNVDTWNEIEAGL 400
+ ++ + + T+ ++ GL
Sbjct: 258 EIQRHSPDCWTYTQVVHGL 276
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + G YN I++ CKL A+A+A L M G+ P++ TY+ + G C+ G
Sbjct: 81 MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140
Query: 302 FEEAKKFYRIMSNS-GLSPNSSVYFTMVYFMCKGGDYETALGFCK--ESIAKGWV-PNFT 357
A + M G + Y ++ +C G + A C+ +++GW P
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDA---CRVFAKMSRGWCRPGVH 197
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T L+ GL +V EA+ L+G +V + NV T+N + GL Q
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQ 243
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 90/224 (40%), Gaps = 14/224 (6%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV------------ 223
G+ PD++TYN +IKA+ ++ A+ +M I P+ +++ L+
Sbjct: 578 GVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAF 637
Query: 224 --AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+K ++ ++ + M G+S Y + LC + E + LL +M
Sbjct: 638 DNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNS 697
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ + + + +C + EA + +R M++ P ++ +C GD+ A+
Sbjct: 698 ILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAV 757
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + G+ + K L+ L E++ ++ K
Sbjct: 758 SIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAK 801
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 89/245 (36%), Gaps = 19/245 (7%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK--TYGIKPDLDTYNRVIKAFC 192
EM E + V +NA++ A D ++ F K + I PD TY+ ++ C
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYV---DAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC 629
Query: 193 ESSDSSS--------------AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
DS + + +M P S++ AL+ G + + E+V +
Sbjct: 630 NKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWL 689
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M+ + M + + C L EA M + +P + + G C
Sbjct: 690 LLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCD 749
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ A + M G + + V+ ++ + + G L AK V + T
Sbjct: 750 SGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRT 809
Query: 359 MKSLV 363
SLV
Sbjct: 810 YASLV 814
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 119/321 (37%), Gaps = 50/321 (15%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL------YGQANMTE 127
DR ++I I+ L + Q E L + AH++I Y Q +
Sbjct: 405 DRQTYAIFIDALCDEG------QLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDID 458
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLD 182
A ++M V +N L+ L +VKR+ ++ K GI+P
Sbjct: 459 SAFGLMEKMASENCMPDVHTYNTLIDGLC------KVKRLDRAIDLLDKMKKQGIEPTTC 512
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA--GFYKEEKYEDVNKVLQ 240
T+N +IK + A + +M KP+ ++ ++ F K E+++ +
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK-- 298
M G+ V YN I + +A +MLS + P+ TYS + C
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
D + + +K ++++ L E C+ A P +T
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQ-------------------ELFEQMCESDAA----PGIST 669
Query: 359 MKSLVTGLAGASKVSEAKELI 379
K+L+ GL ++ E + L+
Sbjct: 670 YKALLRGLCNQCRLEEVEWLL 690
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A++ F M E ++ ++ + +LL A + R+F+E + G P T
Sbjct: 163 NRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQR-GYGPSAST 221
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL--QM 241
Y +++ C S AY I + M + P+ +++ +L+ G + + KVL ++
Sbjct: 222 YGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEA-KVLFKEV 280
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E +YNV I LC+ K EA + M+ KG P TY+ I GF K
Sbjct: 281 LEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANE 340
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A + +R+M G SPN+ +Y T + +CK G A F ++S+ +G VP+ T +
Sbjct: 341 VDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNA 400
Query: 362 LVTGLAGASKVSEAKEL 378
L+ GL GA+++ EA L
Sbjct: 401 LIRGLFGANRMDEAHRL 417
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+E++ + + + A+NA+L AL + D+ + F + G P + Y ++
Sbjct: 68 FQELESNGVAVGMLAYNAILKALMCSGDFDGGFK-FSDIAVGDGSLPHVLAYKTMLDCLI 126
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ + A ++ EM +KS+ P+ ++ AL++ K + +D KV +M + +
Sbjct: 127 KTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLD 185
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y + + C+ RK A L EM+ +G P++ TY + C G A + M
Sbjct: 186 VYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSM 245
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI-AKGWVPNFTTMKSLVTGLAGASK 371
+ G P+ + Y +++Y C G A KE + + + + L+ GL ASK
Sbjct: 246 RSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASK 305
Query: 372 VSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
V EA E+ G+V + + T+N + G
Sbjct: 306 VEEALEVTAGMVDKGCIPTLQTYNALIMGF 335
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 131 RTFKEMDEHKLRHSVG------AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
R++ D H S G + +L+ +A E K +F E + D Y
Sbjct: 234 RSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I+ C +S A + A M K P ++ AL+ GF+K + + ++ ++ME
Sbjct: 294 NVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEE 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G +Y+ I LCK+ K EA + + +G P++VTY+ I G +E
Sbjct: 354 KGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDE 413
Query: 305 AKKFYRIMSNSGLSPNSSV 323
A + YR M G + S+
Sbjct: 414 AHRLYREMGERGYIADRSL 432
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
K EV +F E ++ G+ + YN ++KA S D + P+ +
Sbjct: 59 KRVGEVCELFQEL-ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLA 117
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++ K K + ++V+ M + + G++ Y I LCK + +A + D M+
Sbjct: 118 YKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMT-YTALISVLCKHNRADDAMKVFDIMV 176
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
K + PN Y+ + C+ + A + + M G P++S Y ++ +C GG
Sbjct: 177 EKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSY 236
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG--LVKEKFTKNVDTWNEI 396
A ++G VP+ T SL+ G A +++EAK L L EK + +N +
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVL 296
Query: 397 EAGL 400
GL
Sbjct: 297 IEGL 300
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD D+YN +++ + S A ++L+ M + P+ + G LV F + ++ +V
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSL---------------------------------C 262
++ Q +E G+ G+ YN + +L C
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 263 KLR--KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
++ K EA ++ EM+ K + P+ +TY+ I CK ++A K + IM + PN
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPN 183
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
VY +++ C+ + A E I +G+ P+ +T L+ L +
Sbjct: 184 LDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGR 234
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + L KL +A+A+L M+ +G P+ VT + FC+ E + ++ +
Sbjct: 13 YNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELE 72
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
++G++ Y ++ + GD++ F ++ G +P+ K+++ L K
Sbjct: 73 SNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTR 132
Query: 374 EAKELIGLVKEKFTKNVDTWNEI 396
EA E++G + +K + T+ +
Sbjct: 133 EASEVVGEMIKKSVPDGMTYTAL 155
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + P+ S+ LV G K + +L M G V + + C++++
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
E L E+ S G+ + Y+ + G+F+ KF I G P+ Y T
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK- 385
M+ + K G A E I K VP+ T +L++ L ++ +A ++ ++ EK
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 386 FTKNVDTWNEIEA 398
N+D + + A
Sbjct: 180 IVPNLDVYTSLLA 192
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN VI+ FCE + A + EM + ++G L+ F K K ++
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L+ M+ G+++ + +Y I C + KAL DE+L +G P ++TY+ I GF
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +EA + + M G+ PN Y ++ +C G + AL + K PN
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNV 352
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
T ++ L S V++A E++ L+K++ T+ N+ T+N + GL
Sbjct: 353 VTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI-TYNSLLGGL 397
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A++ EM S+ + L+ A A E + E K G++ DL Y
Sbjct: 194 EKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEM-KHKGLEADLIVYTS 252
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ FC+ + ++ E+ + P A ++ L+ GF K + ++ +++ + M G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V Y I LC + K EA LL+ ML K +PN VTY+ I CKD +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA--LGFCKESIAKGWVPNFTTMKSLVT 364
+ +M P++ Y +++ +C GD + A L + + P+ + +L+
Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIH 432
Query: 365 GLAGASKVSEAKELIGLVKEKF 386
GL +++ +A ++ L+ EK
Sbjct: 433 GLCKGNRLHQALDIYDLLVEKL 454
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ F + + A+ +LA M ++ N ++ L+ G + ++ +L+ M +
Sbjct: 113 LLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNS 172
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I C+ ++ +A L +EM G + VT+ I FCK G +EA
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + GL + VY +++ C G+ + E + +G P T +L+ G
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ EA E+ + E+ + NV T+ + GL
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%)
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ S + A+S +M N S L+ F + K + VL +M +
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V YN+ + LC+ + +A +LL EM + P+ V+Y+ I GFC+ E+
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M SG S + + ++ CK G + A+G KE KG + SL+
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 365 GLAGASKVSEAKELIGLVKEK 385
G ++ K L V E+
Sbjct: 256 GFCDCGELDRGKALFDEVLER 276
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 7/284 (2%)
Query: 76 LAFSIAINKLSEANYFNG---ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++I INKL + + I + +++ +TRPD N +++ L + ++ E +
Sbjct: 353 VTYNIIINKLCKDSLVADALEIVELMKKRRTRPD--NITYNSLLGGLCAKGDLDEASKLL 410
Query: 133 FKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + D V +FNAL+ L + ++ + G D+ T N ++ +
Sbjct: 411 YLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLG-AGDIVTTNILLNST 469
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
+S D + A + ++ I PN+ ++ ++ GF K +L M + V
Sbjct: 470 LKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSV 529
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + SLCK +A L +EM P+ ++++ I G K G+ + A+
Sbjct: 530 FDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVG 589
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
MS++GLSP+ Y ++ K G + A+ F + I G+ P+
Sbjct: 590 MSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P+ DTY +I FC++ + A +L +M + P+ + L++ K+ +
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + M+R V +N+ I K A++LL M G+ P+ TYS I F
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
K G +EA F+ M +SG P++ + +++ + G+ + F K+ + K V
Sbjct: 610 LKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVV 666
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 155/364 (42%), Gaps = 11/364 (3%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT 103
AL LL + +++ R P + + I+ L +A + + L+E++
Sbjct: 3 CALNLLVRAGQHGQAVQLFREERCVP----NEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
R H I +A A+ FK + K + FN L+ AL + +E
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
++F + P++ TY VI C+ A +L M+ PN ++ LV
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + + +LQ M R G + V MYN ++ LCK R+ EA L+ M+ G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P VTY+ + FC+ + A + ++MS G P+ Y T++ +C+ + A
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 344 CKESIAKGWVPNFTTMKSLVTGLA------GASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
K+ +A VP+ T +++ GL K+ A E++ ++K+ N T+ +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358
Query: 397 EAGL 400
GL
Sbjct: 359 IEGL 362
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 154/336 (45%), Gaps = 17/336 (5%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +S+ + L +A + L+E+ TR Q + ++ +L G ++ + A+
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDVIM-YNTLLNGLCKSRRLDEALELV 229
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAF 191
+ M +V +N+L+ +K +V R F I+ G PD+ YN VI
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSK---QVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE------KYEDVNKVLQMMERY 245
C + A ++L +M P+ ++ ++ G K+ K E ++L+MM++
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G Y V I LC+ RK +A ALL M+ + P+ ++S I CK + + A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + +MS PN Y ++ + KGG+ + A+ E + + + P T S++ G
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGVATYNSVLDG 465
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L G ++ EA ++ G++ ++ + ++ + GL
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL +++ VI + C+S D +AY I M + KPN ++ AL+ G K + +
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V ++M + GV+ YN + LC + + EA +++ M+ K P+ +Y I G
Sbjct: 443 RVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
C+ EEA + ++ + G + VY +V +CK A G + I G+
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 114/287 (39%), Gaps = 13/287 (4%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
Q + E PD+ N ++ ++ G + A K+M + V ++ ++
Sbjct: 265 QVMSERGCPPDVIN-----YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID 319
Query: 154 ALT----IAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
L + D+K E +E K G P+ TY VI+ C + S A ++L M
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ P+ SSF ++ K + K+ MM K Y I L K +
Sbjct: 380 DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVD 439
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A + E++ + +P TY+ + G C G EEA + M + P+ + Y ++
Sbjct: 440 KAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+C+ E A + AKG+ LV L ++S+A
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F M E + + + A+ AL+ L+ + + RVF +++ +P + TYN
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF--RPGVATYNS 461
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ C A ++ M K P+ +S+GAL+ G + E+ ++ Q +E G
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
V +YNV ++ LCK ++ ++A + ++++ G K
Sbjct: 522 FAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 163 EVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
E++RV IE + G+KP+ TYN VI C++ + A +L EM + I P+ +
Sbjct: 303 ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYT 362
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ GF K ++ M++ + Y I LC+ + EA L EM+ K
Sbjct: 363 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 422
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
++P+ VTY+ I G+CK+G +EA + M GL+PN Y + +CK G+ +TA
Sbjct: 423 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 482
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E KG N T SLV GL A + +A +L+
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 521
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 2/325 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++I + L + Q L +++ R + + ++ I Y Q + ++ +EM
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
L+ + +N ++L L E +RV E + GI PD Y +I FC+ +
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI-SEGIAPDGVIYTTLIDGFCKLGN 373
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
SSAY + EM ++ I P+ ++ A++ G + + + +K+ M ++ Y
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I CK K EA +L ++ML G+ PN VTY+ G CK G + A + M G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L N Y ++V +CK G+ + A+ K+ G+ P+ T +L+ + ++ A
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553
Query: 377 ELI-GLVKEKFTKNVDTWNEIEAGL 400
EL+ ++ + V T+N + G
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGF 578
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ F E E + + ++N + +L E ++ ++ + G PD+ +Y+ VI
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQM-ELRGCIPDVISYSTVI 295
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + ++ EM K +KPN ++ ++ K K + +VL+ M G+
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y I CKL + A L DEM + + P+ +TY+ I G C+ G EA K
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M L P+ Y ++ CK G + A + + G PN T +L GL
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+V A EL+ + ++ N+ T+N + GL
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGL 508
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++S IN + + + +EE++ + N + I+L + A R
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + + L+ + R+F E K I PD TY VI C+
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQ 405
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + EM K ++P+ ++ AL+ G+ KE K ++ + M + G+ +
Sbjct: 406 TGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y LCK + A LL EM KG++ N TY+ + G CK GN ++A K + M
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+G P++ Y T++ CK + A ++ + + P T L+ G + +
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585
Query: 374 EAKELIGLVKEK-FTKNVDTWNEI 396
+ ++L+ + EK N T+N +
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSL 609
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 16/354 (4%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQN 109
+ E++L + + P D + ++ I+ + + + +E++ R PD
Sbjct: 340 AEAERVLREMISEGIAP----DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD--- 392
Query: 110 ERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
F ++ ++ G Q A + F EM +L + AL+ KE +
Sbjct: 393 --FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSL 450
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ + G+ P++ TY + C+ + +A +L EM RK ++ N ++ +LV G
Sbjct: 451 HNQMLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 509
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + K+++ ME G Y + + CK R+ A LL +ML + ++P V
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 569
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ + GFC G E+ +K + M G+ PN++ Y +++ C + +
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
AKG VP+ T L+ G A + EA L +V + F V ++N + G
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 683
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ ++ TYN ++ C++ + A ++ +M+ P+A ++ L+ + K +
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++L+ M ++ V +NV ++ C + + LL ML KG+ PN+ TY+ I
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C N + YR M G+ P+ + Y ++ CK + + A ++ + KG+
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
++ +L+ G K EA+EL GLV ++ N+
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 1/237 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + AV+ K+M+ + L+ A +++ + + ++P +
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTV 568
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N ++ FC S +L M K I PNA+++ +L+ + ++ +
Sbjct: 569 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 628
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ + YN+ I CK R EA L +M+ KG +Y+ I GF K
Sbjct: 629 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 688
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
F EA++ + M GL + +Y G E L C E+I K V + T
Sbjct: 689 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ A D + VF E PK G++P + ++N +I C+S D + + M
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKR-GLRPTVVSFNTLISGCCKSGDVEEGFRLKGVM 309
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + + P+ +F AL+ G KE + ++ + + M G+ + I CK K
Sbjct: 310 ESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKV 369
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A ML++G++P+ VTY+ I G CK G+ +EA++ M+ SGL P+ + T+
Sbjct: 370 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ CK GD E+AL + + +G + +L++GL +V +A ++
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRML 481
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 44/318 (13%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+++++G +A +A F E+ + LR +V +FN L+ + D +E R+ +
Sbjct: 252 NVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL-KGVME 310
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+ PD+ T++ +I C+ + EM + + PN +F L+ G K K +
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
K QMM G++ + YN I+ LCK+ EA+ L++EM + G+KP+ +T++ I
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430
Query: 294 YGFCKDGNFEEAKKFYRIMS-----------------------------------NSGLS 318
G CKDG+ E A + R M ++G
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y ++ CK GD + KE + G VP T +L+ GL ++ AK L
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550
Query: 379 ------IGLVKEKFTKNV 390
+G+ T N+
Sbjct: 551 LDAMLNVGVAPNDITYNI 568
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 3/261 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GI 177
Y + T AV+ F+ + ++K + LL + + E++R + + + G
Sbjct: 186 YVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPV-EIERSWALYLEVLDSGY 244
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P + +N ++ FC++ D +A + E+ ++ ++P SF L++G K E+ +
Sbjct: 245 PPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFR 304
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ +ME G+ V ++ I+ LCK + E L DEM +G+ PN VT++ I G C
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQC 364
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G + A K +++M G+ P+ Y ++ +CK GD + A E A G P+
Sbjct: 365 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKI 424
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
T +L+ G + A E+
Sbjct: 425 TFTTLIDGCCKDGDMESALEI 445
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PDL TYN +I C+ D A ++ EM +KP+ +F L+ G K+ E
Sbjct: 383 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESA 442
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M G++ + I LC+ + +A +L +MLS G KP+ TY+ I
Sbjct: 443 LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDC 502
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK G+ + K + M + G P Y ++ +CK G + A + G PN
Sbjct: 503 FCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPN 562
Query: 356 FTTMKSLVTG 365
T L+ G
Sbjct: 563 DITYNILLDG 572
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 39/290 (13%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D FS IN L + + S +E+ R + N I + + A++ F
Sbjct: 317 DVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNF 376
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M +R + +NAL+ L D KE +R+ E + G+KPD T+ +I C+
Sbjct: 377 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS-GLKPDKITFTTLIDGCCK 435
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN----------------- 236
D SA I M + I+ + +F AL++G +E + D
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPT 495
Query: 237 ------------------KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
K+L+ M+ G GV YN ++ LCK + AK LLD ML
Sbjct: 496 YTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAML 555
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ G+ PN +TY+ + G K G+ + F S GL + + Y +V
Sbjct: 556 NVGVAPNDITYNILLDGHSKHGSSVDVDIFN---SEKGLVTDYASYTALV 602
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
++++ E+ P F L+ GF K + V + + G++ V +N I
Sbjct: 232 SWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLIS 291
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
CK E L M S+G+ P+ T+S I G CK+G +E + M GL P
Sbjct: 292 GCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVP 351
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N + T++ CKGG + AL + +A+G P+ T +L+ GL + EA+ L+
Sbjct: 352 NGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLV 411
Query: 380 ------GLVKEKFT 387
GL +K T
Sbjct: 412 NEMTASGLKPDKIT 425
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 139 HKLRHSVGA------FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
H+ SVG +N L+L L K Y R + + G +P++ TY +I FC
Sbjct: 2 HESMLSVGCGPDIFTYNTLILGLC-KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A ++L EM K + NA + L++ K+EK +D + M G K +
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I LCK+ K EA L +ML +G+ N++TY+ I+ F + G +EA K M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G + Y ++ +C+ G+ E L ++ ++KG PN + L+ GL +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A E + ++ T ++ T+N + GL
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGL 269
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I A C+ A ++ +M K KP+ +F +L+ G K K+E+ + Q M
Sbjct: 87 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 146
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN IH+ + EA L+++ML +G + +TY+ I C+ GN E
Sbjct: 147 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 206
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ + M + GL+PN+ ++ +C+ G+ + AL F ++ I +G P+ T SL+
Sbjct: 207 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 266
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL + EA L L E + T+N +
Sbjct: 267 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 2/321 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I L + Y + + E++ + N + I + + E A
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM L + +N L+ AL + ++ +F + + G KPD+ T+N +I C+
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPDIFTFNSLIFGLCK 131
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +M + + N ++ L+ F + ++ K++ M G
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I +LC+ + AL ++M+SKG+ PN+++ + I G C+ GN + A +F R M
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL+P+ Y +++ +CK G + AL + +G P+ T +L++
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311
Query: 374 EAKELIGL-VKEKFTKNVDTW 393
+A L+ V F N TW
Sbjct: 312 DAHLLLSRGVDSGFIPNEVTW 332
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 6/237 (2%)
Query: 103 TRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+PD+ F +S+I + N E A+ +++M + + +N L+ A
Sbjct: 115 CKPDI----FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 170
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+E ++ + G D TYN +IKA C + + ++ +M K + PN S
Sbjct: 171 QEALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 229
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G + + + L+ M G+ + YN I+ LCK + EA L D++ +G
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ P+++TY+ I CK+G F++A +SG PN ++ +V K GD E
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 1/269 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ KEM+ ++H++ ++ L+ KD+ +F + K G
Sbjct: 95 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD-G 153
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
IKPD+ YN +I AFC A + EM ++ KP +F ++ GF ++ + +
Sbjct: 154 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 213
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
V MM G V YN I L + RK +A+ +LDEM G+ PN TY+ ++G+
Sbjct: 214 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 273
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A ++ + + GL + Y ++ CK G ++AL KE A+ N
Sbjct: 274 ASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 333
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
L+ G A V EA +L+ +K +
Sbjct: 334 FIYNILIDGWARRGDVWEAADLMQQMKRE 362
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ +E K + N + + I Y Q + A +EM+E + + ++ ++
Sbjct: 4 HWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGY 63
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
T+ D + VF F K G+ P + TY +I + + S A + EM+ IK N
Sbjct: 64 TMVGDEDKCLLVFERF-KECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHN 122
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ GF K + + + + + + + G+K V +YN I + C + K A +
Sbjct: 123 MKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVK 182
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM + KP + T+ I+GF + G ++A + +M SG P Y ++ + +
Sbjct: 183 EMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKR 242
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E A E G PN T +++ G A +A
Sbjct: 243 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKA 282
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV T KEM + + + + F ++ + K+ VF + + G P + TYN
Sbjct: 175 DRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVF-DMMRMSGCIPTVHTYNA 233
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I E A IL EM + PN ++ ++ G+ + G
Sbjct: 234 LILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEG 293
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V Y + + CK + A A+ EM ++ + N+ Y+ I G+ + G+ EA
Sbjct: 294 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAA 353
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+ P+ Y + + K GD + A +E + G PN T +L+ G
Sbjct: 354 DLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGW 413
Query: 367 AGAS 370
A AS
Sbjct: 414 ARAS 417
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI +D Y+ ++ + D + + P+ ++G L+ + K K
Sbjct: 48 GIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKA 107
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + ME G+K + Y++ I+ KL+ A A A+ ++++ G+KP+ V Y++ I
Sbjct: 108 LEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 167
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G + A + M P + + +++ + G+ + AL G +P
Sbjct: 168 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT 227
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T +L+ GL K+ +A++++
Sbjct: 228 VHTYNALILGLVEKRKMEKAEQIL 251
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY ++KA C+S SA ++ EM ++I N + L+ G+ + +
Sbjct: 293 GLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEA 352
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M+R G++ + Y I++ K A ++EM S G+KPN TY+ I G
Sbjct: 353 ADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLING 412
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM------CKGGDYETALGFCKESI 348
+ + E+A + M SGL P+ +VY ++ + G Y L C+E +
Sbjct: 413 WARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMV 471
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 7/291 (2%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHS----IILYGQANMTE--HAVRTFKEMDEHKLRHS 144
F G+ + + T ++Q +R + I++G A E A+ F M +
Sbjct: 168 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT 227
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +NAL+L L + ++ +++ E G+ P+ TY ++ + D+ A++
Sbjct: 228 VHTYNALILGLVEKRKMEKAEQILDEMTLA-GVSPNEHTYTTIMHGYASLGDTGKAFAYF 286
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
++ + ++ + ++ AL+ K + + V + M + +YN+ I +
Sbjct: 287 TKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARR 346
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA L+ +M +G++P+ TY+ FI K G+ + A K M + G+ PN Y
Sbjct: 347 GDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTY 406
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
T++ + E AL +E G P+ L+T L + V+
Sbjct: 407 TTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHG 457
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I A+C+ + A +++ EM+ + I + ++ G+ D +K L + E
Sbjct: 21 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGY---TMVGDEDKCLLVFE 77
Query: 244 RY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
R+ G+ V Y I+ KL K ++A + EM G+K N TYS I GF K
Sbjct: 78 RFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLK 137
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++ A + + G+ P+ +Y ++ C G + A+ KE + P T
Sbjct: 138 DWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFM 197
Query: 361 SLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
++ G A ++ +A ++ +++ V T+N + GL
Sbjct: 198 PIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGL 238
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
N++ Y + IY +C+ N ++A+ R M G+ +Y TM+ GD + L
Sbjct: 17 NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ G P+ T L+ A KVS+A E+
Sbjct: 77 ERFKECGLNPSVITYGCLINLYAKLGKVSKALEV 110
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEENLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ F + + A S+ + + ++P+ SF L+ G+ K +
Sbjct: 132 YPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E I KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HGFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM K + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM+ KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N + M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ M GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYKPS 415
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++GF K+G A+ + ++ GL P+ + T++ K GD
Sbjct: 138 FFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A L
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVL 228
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G +PD TYN +I + C A +L EM+ N ++ L+ GF K +K
Sbjct: 306 KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKI 365
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ ++ ME G+ YN I LCK R+ EA L+D+M+ +G+KP+ TY+
Sbjct: 366 EEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSM 425
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ FC++G+ ++A + M+++G P+ Y T++ +CK G E A + KG
Sbjct: 426 LTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGM 485
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
V ++ L + EA L ++EK
Sbjct: 486 VLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK 518
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 23 ATSSILSSGDKTPLTSKDKTRAAL-TLLKSESNPEKILEICRAAALTPESHLDRLAFSIA 81
+T S S+ T S + T A L L+ +++ L + A+ P + +
Sbjct: 34 STLSFASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEI 93
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-----YGQANMTEHAVRTFKEM 136
+ KL + FN + L+E+K D Q +R ++L Y + + E + + M
Sbjct: 94 LRKLGKVGSFNSMKDILQEMKGL-DCQIDR----GVLLIFIDSYAKFELYEEILCIVEVM 148
Query: 137 D-EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ E L +N LL L K V+ V + GIKPD+ T+N +IKA C++
Sbjct: 149 EVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMV-SKGIKPDVSTFNILIKALCKAH 207
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ EM + P+ +F L+ GF +E + +V + M G N
Sbjct: 208 QIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVN 267
Query: 256 VRIHSLCKLRKCAEAKALLDEML----------------SKGMKPNSVTYSHFIYGFCKD 299
V +H CK + EA + +DEM +KG +P+ TY+ I C
Sbjct: 268 VLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYR 327
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA R M SG + N Y T++ CK E A + +G N T
Sbjct: 328 GKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTY 387
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+L+ GL + +V EA +L+ GL +KFT N
Sbjct: 388 NTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 117/296 (39%), Gaps = 52/296 (17%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
++ V FN L+ AL A + V E +YG+ PD T+ +++ F E + A
Sbjct: 189 IKPDVSTFNILIKALCKAHQIRPAILVMEEM-SSYGLVPDEKTFTTLMQGFIEEGNMDGA 247
Query: 201 Y---------------------------------------------------SILAEMDR 209
+ + EM
Sbjct: 248 FRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKN 307
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
K +P+ ++ L+ K ++ +L+ ME G V YN I CK +K E
Sbjct: 308 KGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEE 367
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A+ + D+M +G+ NSVTY+ I G CK +EA + M GL P+ Y +M+
Sbjct: 368 AEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLT 427
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ C+ GD + A + + G P+ T +L+ GL A +V A L+ ++ K
Sbjct: 428 YFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK 483
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ + EM + +N L+ +L +E + E + G ++ TYN +I
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM-EISGCARNVITYNTLI 356
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ A I +M+ + + N+ ++ L+ G K + ++ +++ M G+K
Sbjct: 357 DGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLK 416
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
YN + C+ +A ++ M S G +P+ VTY I G CK G E
Sbjct: 417 PDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRL 476
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
EA + +R M G +P++ Y + +
Sbjct: 477 LRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSN 536
Query: 334 -GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK--FTKN 389
GG A+ F E I KG++P F++ L GL S +L+ LV EK F++N
Sbjct: 537 SGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQN 595
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 17/257 (6%)
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
Y+E+ + +G+ D YN ++ + + ++ + M K IKP+ S+F
Sbjct: 138 YEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFN 197
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ K + V++ M YG+ + + + A + ++ML
Sbjct: 198 ILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDA 257
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKF----------------YRIMSNSGLSPNSSVY 324
G +VT + ++GFCK+G EEA F Y M N G P+ Y
Sbjct: 258 GCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTY 317
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK- 383
++ +C G + ALG +E G N T +L+ G K+ EA+E+ ++
Sbjct: 318 NMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEI 377
Query: 384 EKFTKNVDTWNEIEAGL 400
+ ++N T+N + GL
Sbjct: 378 QGLSRNSVTYNTLIDGL 394
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 13/171 (7%)
Query: 117 IILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
I+ YG +A E A R + + + + A+N ++ AL K KE R+F
Sbjct: 454 IVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFR 513
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDS-SSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E + G PD TY V + S A + EM K P SSF L G
Sbjct: 514 EMEEK-GNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCS 572
Query: 229 EEKYEDVNKVLQM-MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ + K++ + ME+ V I K+RK +A A L +L
Sbjct: 573 LSMEDTLIKLVDLVMEKANFSQNEV---VMIRGFLKIRKFQDALATLGGLL 620
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEENLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E I KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM K + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM+ KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N + M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ M GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 84/211 (39%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ GL P+ + T++ K GD
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A L
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVL 228
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 2/266 (0%)
Query: 101 LKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
L+T+ L+++ + +I Y ++ A+ ++ EHK R +L L K
Sbjct: 56 LETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+K V F E G L +N ++ +F + + A S+ + + ++P+ SF
Sbjct: 116 YFKLVWG-FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSF 174
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ G+ K + ++ M+ G++ V Y+V I+ LCK K +A L DEML
Sbjct: 175 NTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLD 234
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG+ PN VT++ I G CK+G + A + Y+ M + LSP+ Y T++Y +CK GD +
Sbjct: 235 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTG 365
A E I KG P+ T +L+ G
Sbjct: 295 AQDLIDEMIMKGLKPDKFTYTTLIDG 320
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM K + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM+ KG+KP+ TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N + M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ M GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYKPS 415
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 85/210 (40%), Gaps = 1/210 (0%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ T +++ + +S+ ++ + E + +++ + F L+ + +
Sbjct: 20 IHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTLRSDIYVFSGLITAYLE 78
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + + + L KL+ +E L G +
Sbjct: 79 SGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYF 138
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ F K+G A+ + ++ GL P+ + T++ K GD
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A L
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVL 228
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 46/324 (14%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + + A F++M + ++ S G +N L+ +KEV R+ E T+ ++PD
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEM-STHDLEPDC 409
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIK---------------------PNASSFG 220
Y ++ C++ + A +I + RK IK PN ++G
Sbjct: 410 FIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYG 469
Query: 221 AL-----------------------VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
AL V G EK+E +++ M G++ V ++N
Sbjct: 470 ALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTL 529
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ LC+ + EA+ L++ ML G++P+ ++Y+ + G C G +EA K +M + GL
Sbjct: 530 MCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGL 589
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN Y T+++ CK + A +E + G P+ T +++ GL + SEAKE
Sbjct: 590 KPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKE 649
Query: 378 L-IGLVKEKFTKNVDTWNEIEAGL 400
L + ++ + ++ T+N I GL
Sbjct: 650 LYLNMINSRTQWDMYTYNIILNGL 673
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 8/299 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--Y 120
R A++T +HL A S A + S GIS + ++ D +SI++ +
Sbjct: 147 RPASVTAFNHL-LTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCF 205
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+ EH F + + R + FN LL L AK E + + +G P+
Sbjct: 206 CRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPN 265
Query: 181 LDTYNRVIKAFCESSDSSSAYSIL---AEMDRKSIKPNASSFGALVAGFYKEEKYEDV-N 236
+ +YN ++K FC + + A +L A+ S P+ S+ ++ GF++E + + N
Sbjct: 266 VVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYN 325
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
LQM++R G+ V YN I LCK + AKA+ +ML KG+KP++ TY+ I+G+
Sbjct: 326 LFLQMIDR-GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGY 384
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
G ++E + MS L P+ +Y ++ ++CK G A I KG P+
Sbjct: 385 LSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPD 443
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 1/253 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + +R V FN L+ L E +R+ IE G++PD+ +YN ++ C +
Sbjct: 513 EMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRL-IELMLRVGVRPDVISYNTLVDGHCLT 571
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A +L M +KPN ++ L+ G+ K + +D +L+ M G V Y
Sbjct: 572 GRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N +H L + + +EAK L M++ + + TY+ + G CK+ +EA K ++ + +
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
GL + + M+ + KGG E A+ A G VP+ T + L + E
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751
Query: 375 AKELIGLVKEKFT 387
L ++E T
Sbjct: 752 LGVLFSAMEENGT 764
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLAL------------------------TIAKD 160
M + AV F +M + L +V + AL+ AL T+ K
Sbjct: 445 MIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKW 504
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
K + VF + GI+ D+ +N ++ C A ++ M R ++P+ S+
Sbjct: 505 EKAEELVFEMLDQ--GIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYN 562
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
LV G + ++ K+L +M G+K YN +H CK R+ +A +LL EML
Sbjct: 563 TLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMN 622
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G P+ VTY+ ++G + G F EAK+ Y M NS + Y ++ +CK + A
Sbjct: 623 GPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEA 682
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
+ +KG + T ++ L K +A +L + +V+T+ I
Sbjct: 683 FKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAEN 742
Query: 400 L 400
L
Sbjct: 743 L 743
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 26/204 (12%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ TYN VI C++ A ++ +M K +KP+ ++ L+ G+ K+++V
Sbjct: 334 GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEV 393
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ M + ++ +Y + + LCK +C EA+ + D ++ KG+KP
Sbjct: 394 VRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKP----------- 442
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
D +EA + M GLSPN Y ++ +CK LG ++I K
Sbjct: 443 ---DAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCK-------LGRVDDAILK----- 487
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
F M + V GL K +A+EL+
Sbjct: 488 FNQMINEVYGLCTVEKWEKAEELV 511
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 8/284 (2%)
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
RPD+ + L G+ T+ A + M L+ + +N LL A+
Sbjct: 554 VRPDVISYNTLVDGHCLTGR---TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRID 610
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+ + E G PD+ TYN ++ ++ S A + M + + ++ +
Sbjct: 611 DAYSLLREMLMN-GPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNII 669
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G K ++ K+ Q + G++ + +N+ I +L K K +A L + + G+
Sbjct: 670 LNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGL 729
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P+ TY K+G+ EE + M +G +PNS + +V GD A
Sbjct: 730 VPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGA 789
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ + K NF+ S + L E ++L + EK+
Sbjct: 790 YLSKLDEK----NFSLEASTASMLISLYSRGEYQQLAKSLPEKY 829
>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
Length = 316
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P++ TY+ +I C+S + A I M + KPNA+++ +L+ G+ E D+
Sbjct: 5 GQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDM 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N V +M + GM+ ++N+ I++ CK + EA ++M G P+ VTY+ I G
Sbjct: 65 NNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A + M + GLSPN + T+++ G +E A E + +G PN
Sbjct: 125 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPN 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
T S++ L KV+EA++L L+ K NV ++N + G
Sbjct: 185 VNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHG 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 6/208 (2%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
D VK + ++ G++PD +N I A+C+ A +M + P+ ++
Sbjct: 63 DMNNVKDLMVQ----NGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTY 118
Query: 220 GALVAGFYKEEKYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
++ G K + +D +++ QM++ G+ + + IH K +A+ L EM+
Sbjct: 119 TTVIDGLCKIGRLDDAMSRFCQMIDD-GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMM 177
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+G+ PN T++ I K+G EA+K + +M +G PN Y TM++ G+
Sbjct: 178 DRGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 237
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + G PN + +L+ G+
Sbjct: 238 EVMKLLDDMLLIGLKPNAVNLNTLLDGM 265
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 24/262 (9%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
N + + + RPD H +I +Y + + A TF +M + + +
Sbjct: 64 MNNVKDLMVQNGMRPDR-----HVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTY 118
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
++ L + F + G+ P++ T+ +I F A + EM
Sbjct: 119 TTVIDGLCKIGRLDDAMSRFCQMIDD-GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMM 177
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ I PN ++F +++ +KE K + K+ +M R G K V YN IH +
Sbjct: 178 DRGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 237
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E LLD+ML G+KPN+V + + G M + GL PN T++
Sbjct: 238 EVMKLLDDMLLIGLKPNAVNLNTLLDG----------------MLSIGLKPNVDTCKTLI 281
Query: 329 YFMCKGGDYETALGFCKESIAK 350
C+ E L +E ++K
Sbjct: 282 DSCCEDDRIEDILTLFREMLSK 303
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 74 DRLAFSIAI------NKLSEANY-FNGISQYLEELKTRPDLQNERFHAHSIILYGQANM- 125
DR F+I I +L EA+ FN + Q L PD+ ++ ++ G +
Sbjct: 79 DRHVFNIEIYAYCKCGRLDEASLTFNKMQQ----LGFMPDIV-----TYTTVIDGLCKIG 129
Query: 126 -TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ A+ F +M + L ++ F L+ ++ +++ + +F E GI P+++T+
Sbjct: 130 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM-MDRGIPPNVNTF 188
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV--------- 235
N +I + + A + M R KPN S+ ++ G++ + +V
Sbjct: 189 NSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 248
Query: 236 ----------NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
N +L M G+K V I S C+ + + L EMLSK K +
Sbjct: 249 IGLKPNAVNLNTLLDGMLSIGLKPNVDTCKTLIDSCCEDDRIEDILTLFREMLSKADKTD 308
Query: 286 SVT 288
++T
Sbjct: 309 TIT 311
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN +I C++ A +L EM+ PN+ + L+ G K+ + ++
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ M++ G + V +Y I C K L DEML KG+ N VTYS ++G
Sbjct: 235 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ G ++EA M+ G+ P+ Y ++ +CK G A+ + KG P+
Sbjct: 295 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 354
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T L++GL V +A +++ ++ EK K +V T+N + GL
Sbjct: 355 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +EM + + ++N L+ L AK KE + +E + G P+ T ++
Sbjct: 163 AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLM 221
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A +L M +K + +G L++GF + ++ M G+
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ V Y+ +H LC+L + EA +L+ M G+ P+ VTY+ I G CKDG A
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M G P++ Y ++ +CK G A + I KG + T +L+ GL
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401
Query: 369 ASKVSEAKELIGLVKEK---FTKNVDTWNEIEAGL 400
KV EA +L + + NV T+N + GL
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 436
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 4/274 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A ++ M + S G+ +AL+ A+ ++ + G ++ N V+
Sbjct: 93 AFSVYRRMTHVDVLPSFGSLSALIECFADAQK-PQLGFGVVGLVLKRGFTVNVFIMNIVL 151
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C + A ++ EM RKS+ P+ S+ L+ G K +K ++ +L ME G
Sbjct: 152 KGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCF 211
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ LCK + EA LL+ M KG + V Y I GFC +GN + K+
Sbjct: 212 PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 271
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G+S N Y +V+ +C+ G ++ A G P+ T L+ GL
Sbjct: 272 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK 331
Query: 369 ASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
+ + A +L+ L+ EK + NV T+N + +GL
Sbjct: 332 DGRATHAMDLLNLMVEKGEEPSNV-TYNVLLSGL 364
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-F 171
++++L G + + A + + M E + V +N L+ L E ++F F
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++P++ T+N +I C+ + A I +M +K N ++ L+ G K K
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ ++ + + G Y++ I CK+R AK L EM + G+ P Y+
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 536
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ CK+G+ E+AK ++ M N+ P+ + TM+ K GD++ + + G
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
P+ T +L+ L+ ++ EAK L +V FT + ++ + GL
Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F + L S N L+ AL +++Y V+ + P + + +I
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV-DVLPSFGSLSALI 116
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ F ++ + ++ + ++ N ++ G + + +++ M R +
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +K EA LL EM + G PNSVT + + G CKDG +EA +
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M G + +Y T++ C G+ + E + KG N T LV GL
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ EA ++ + E +V T+ + GL
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 3/256 (1%)
Query: 126 TEHAVRTFKEM--DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A++ F M +E+ L +V FN L+ L + ++ + K G +L T
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK-GSCGNLVT 463
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN ++ ++ A + ++ PN+ ++ L+ GF K + M
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 523
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+G+ + YN + SLCK +AK+L EM + +P+ ++++ I G K G+F+
Sbjct: 524 THGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ 583
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
K+ M GL P++ + T++ + K G+ + A + +A G+ P+ SL+
Sbjct: 584 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 643
Query: 364 TGLAGASKVSEAKELI 379
GL+ +E L+
Sbjct: 644 KGLSSKGDTTEIINLL 659
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV+ ++M + ++ +N LL A KE ++ + G P+ TY+ +I
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD-LGFVPNSFTYSILI 503
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ + A + EM + P + L+A KE E + Q M +
Sbjct: 504 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 563
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +N I K K L +M+ G++P+++T+S I K G +EAK
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M SG +P++ VY +++ + GD + + AKG V + + +++T L
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 683
Query: 369 ASKVSEAKELI 379
+ + + EL+
Sbjct: 684 SIQEVDVMELL 694
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F EM L+ + + AL+ A + ++ +F E + G PD Y +I
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA-GCSPDAIVYYTLI 528
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
++ A +L++M P+ SF L+ GF ++ K ++ ++L+ ME G+K
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN I K + A L+ +M+ +G+ P VTY I+ +C +GN +EA K
Sbjct: 589 PDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648
Query: 309 YRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+R MS+ S + PN+ +Y ++ +C+ + AL + KG PN T ++ GL
Sbjct: 649 FRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQ 708
Query: 368 GASKVSEAKELIGLVKE 384
+ +S+A EL+ + E
Sbjct: 709 EKNWLSKAFELMDRMTE 725
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 3/285 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A+M E A F +M++ + +V N L+ + F E + G+K
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM-QGKGLKG 484
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TY +I+AFC ++ A + EM P+A + L++G + K + + VL
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G + +NV I+ C+ K EA +L EM + G+KP+ VTY+ I F K
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+F A + + M GL P Y +++ C G+ + A+ ++ + VP T +
Sbjct: 605 GDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVI 664
Query: 360 KS-LVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
+ L+ L ++V A L+ +K K K N +T+N + GL +
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQE 709
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 5/250 (2%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF----PKTYGIKPDLDTYNRVIKA 190
EM E ++ +V F L+ L + E VF + + ++PD+ TYN +I
Sbjct: 330 EMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDG 389
Query: 191 FCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ ++ M + PN ++ L+ G+ K E ++ M + G+
Sbjct: 390 LCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V N + +CK + A +EM KG+K N+VTY+ I FC N E+A + +
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M +G SP++ VY+T++ + + G + A + G+ P+ + L+ G
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK 569
Query: 370 SKVSEAKELI 379
+K+ EA E++
Sbjct: 570 NKLDEAYEML 579
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TYN +I +C++S +A + +M++ + PN + LV G K + +
Sbjct: 414 PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEF 473
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY--------- 289
M+ G+K Y I + C + +A L DEML G P+++ Y
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533
Query: 290 --------------------------SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ I GFC+ +EA + + M N+G+ P+
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y T++ K GD+ TA K+ + +G VP T +L+ + EA ++
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA + A +M E + +FN L+ E + E + GIKPD
Sbjct: 533 QAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM-ENAGIKPDG 591
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I F ++ D S+A+ ++ +M ++ + P ++GAL+ + ++ K+ +
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651
Query: 242 MERYG-MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M + +YN+ I+SLC+ + A +L+D+M KG+KPN+ T++ G +
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A + M+ +P+ Y TM
Sbjct: 712 WLSKAFELMDRMTEHACNPD---YITM 735
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 7/237 (2%)
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A D +E+ + +F + + + P+ ++I C S + A+ +L + + A+
Sbjct: 248 AVDEEEIVGLVSKFAE-HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAA 306
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S AL+ + +++ +N +L M+ ++ V + + I+ LCK R+ EA + ++M
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366
Query: 278 ---LSKG--MKPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSVYFTMVYFM 331
S G ++P+ +TY+ I G CK G EE R+ S PN+ Y ++
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
CK E A + G PN T+ +LV G+ +++ A E ++ K K
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLK 483
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 26/303 (8%)
Query: 117 IILYGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKD----YKEVKRVFIEF 171
I +G+A M + + + E+ +L H +L D E+ + EF
Sbjct: 166 IRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEF 225
Query: 172 PKTYGIKPDLDTYNRVIKAFCE------SSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
P P+ +T + V A + + D ++++ + PN+ L++
Sbjct: 226 P------PNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISR 279
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + + VL + + G + N + +L + R+ LL EM ++PN
Sbjct: 280 LCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPN 339
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG------LSPNSSVYFTMVYFMCKGGDYET 339
VT+ I CK +EA + + M N G + P+ Y T++ +CK G E
Sbjct: 340 VVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398
Query: 340 ALGFCKESIAKG-WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIE 397
LG + ++ +PN T L+ G AS + A+EL + K+ NV T N +
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 398 AGL 400
G+
Sbjct: 459 DGM 461
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%), Gaps = 15/191 (7%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPD-LQNERFH 113
+L + A +P D ++F++ IN N + + L+E++ +PD +
Sbjct: 543 VLSKMKEAGFSP----DIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+H + + A R K+M + L +V + AL+ A + + E ++F +
Sbjct: 599 SH----FSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSS 654
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T + P+ YN +I + C + A S++ +M K +KPN ++F A+ G +E+ +
Sbjct: 655 TSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL-QEKNW- 712
Query: 234 DVNKVLQMMER 244
++K ++M+R
Sbjct: 713 -LSKAFELMDR 722
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 161/394 (40%), Gaps = 67/394 (17%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTE--- 127
+ + + + I+ LSE N N + LEE+ PD+Q H + G+ +
Sbjct: 234 NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLH 293
Query: 128 -------------------HAVRTFKEMDEHKLRHS------VGAFNALLLALTIAKDYK 162
H + ++DE + S +N L+ ++ ++
Sbjct: 294 DRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFE 353
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E K + + G +PD T+N +I C+ SA L EM +K +PN ++ L
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF K+ +E+ +KV+ M G+ YN I +LCK K +A + EM SKG
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY------------- 329
KP+ T++ IYG CK+ EEA YR M G+ N+ Y T+++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 330 ----------------------FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+CK G E LG ++ + P+ + L+
Sbjct: 534 LVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFC 593
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
KV++A + + +++ T ++ T+N + GL
Sbjct: 594 RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGL 627
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 144/336 (42%), Gaps = 34/336 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + I+KL F I + L+++K + E + YG+A + A R +M
Sbjct: 96 VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155
Query: 137 -DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ + ++N +L L K VF + + GI P + T+ V+KAFC +
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDM-LSRGISPTVYTFGVVMKAFCMVN 214
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ SA S+L +M + PN+ + L+ + + + K+L+ M G + V +N
Sbjct: 215 EVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFN 274
Query: 256 VRIHSLCKLRKCAEAKALLDE-------------------------------MLSKGMKP 284
IH LCK + EA L D MLSK P
Sbjct: 275 DVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNP 334
Query: 285 NSVTYSHFIYGFCKDGNFEEAKK-FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
N+V Y+ I G+ G FEEAK Y+ M +G P++ + M+ +CK G +AL F
Sbjct: 335 NTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEF 394
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E + KG+ PN T L+ G EA +++
Sbjct: 395 LDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 2/321 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F+I I+ L + Y ++L+E+ + N + I + + E A +
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M L + +N L+ AL ++ +++ E + G KPD+ T+N +I C+
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM-SSKGCKPDIYTFNSLIYGLCK 489
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + +M + + N ++ L+ F + E + +K++ M G
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I +LCK + L+++M + + P+ + + I FC+ G +A +F R M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL+P+ Y +++ +CK G ++ AL AKG P+ T +L++ +
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 374 EAKELI-GLVKEKFTKNVDTW 393
+A +L+ V F N TW
Sbjct: 670 DACQLLFKGVSNGFIPNEITW 690
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 2/269 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ EM + +V + L+ ++E +V + G+ + YN +I
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV-VNSMSAKGLSLNTVGYNCLI 449
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C+ A + EM K KP+ +F +L+ G K +K E+ + + M G+
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN IH+ +L +A L+ EM +G +++TY+ I CK G E+
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + P+ + ++ C+ G AL F ++ I +G P+ T SL+ GL
Sbjct: 570 IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ EA L GL + + T+N +
Sbjct: 630 MGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 117/238 (49%), Gaps = 9/238 (3%)
Query: 104 RPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+PD+ + + ++YG + + E A+ +++M + + +N L+ A +
Sbjct: 474 KPDI-----YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
++ ++ E + G D TYN +IKA C++ + ++ +M + I P+ +S
Sbjct: 529 QQADKLVGEM-RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ F + K D + L+ M + G+ + YN I+ LCK+ + EA L + + +KG
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV-YFMCKGGDYE 338
+ P++VTY+ I +C +G F +A + ++G PN + ++ YF+ D E
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSE 705
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 155/364 (42%), Gaps = 11/364 (3%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT 103
AL LL + +++ R P + + I+ L +A + + L+E++
Sbjct: 3 CALNLLVRAGQHGQAVQLFREERCVP----NEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
R H I +A A+ FK + K + FN L+ AL + +E
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
++F + P++ TY VI C+ A +L M+ PN ++ LV
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + + +LQ M R G + V MYN ++ LCK R+ EA L+ M+ G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P VTY+ + FC+ + A + ++MS G P+ Y T++ +C+ + A
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 344 CKESIAKGWVPNFTTMKSLVTGLA------GASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
K+ +A VP+ T +++ GL K+ A E++ ++K+ N T+ +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358
Query: 397 EAGL 400
GL
Sbjct: 359 IEGL 362
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 154/336 (45%), Gaps = 17/336 (5%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +S+ + L +A + L+E+ TR Q + ++ +L G ++ + A+
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDVIM-YNTLLNGLCKSRRLDEALELV 229
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAF 191
+ M +V +N+L+ +K +V R F I+ G PD+ YN VI
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSK---QVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE------KYEDVNKVLQMMERY 245
C + A ++L +M P+ ++ ++ G K+ K E ++L+MM++
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G Y V I LC+ RK +A ALL M+ + P+ ++S I CK + + A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + +MS PN Y ++ + KGG+ + A+ E + + + P T S++ G
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGVATYNSVLDG 465
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L G ++ EA ++ G++ ++ + ++ + GL
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL +++ VI + C+S D +AY I M + KPN ++ AL+ G K + +
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V ++M + GV+ YN + LC + + EA +++ M+ K P+ +Y I G
Sbjct: 443 RVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
C+ EEA + ++ + G + VY +V +CK A G + I G+
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 114/287 (39%), Gaps = 13/287 (4%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
Q + E PD+ N ++ ++ G + A K+M + V ++ ++
Sbjct: 265 QVMSERGCPPDVIN-----YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID 319
Query: 154 ALT----IAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
L + D+K E +E K G P+ TY VI+ C + S A ++L M
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ P+ SSF ++ K + K+ MM K Y I L K +
Sbjct: 380 DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVD 439
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A + E++ + +P TY+ + G C G EEA + M + P+ + Y ++
Sbjct: 440 KAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+C+ E A + AKG+ LV L ++S+A
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F M E + + + A+ AL+ L+ + + RVF +++ +P + TYN
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF--RPGVATYNS 461
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ C A ++ M K P+ +S+GAL+ G + E+ ++ Q +E G
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
V +YNV ++ LCK ++ ++A + ++++ G K
Sbjct: 522 FAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 6/301 (1%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQN---ERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+ KL FN + L E+ R +L N E + ++ YG+ + AV TF+ MD
Sbjct: 126 LQKLGFHGKFNEMENLLSEM--RSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDL 183
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
SV ++NA++ L + + +V++ K ++ D+ TY IK+FC +
Sbjct: 184 FNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYTIRIKSFCRTGRPY 242
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+A +L M NA ++ +V GFY+ + ++ M + V+ +N +
Sbjct: 243 AALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLV 302
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
H+LCK E++ L D++L +G+ PN T++ FI G CK+G+ + A + +S GL
Sbjct: 303 HALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLR 362
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y T++ +C+ A + + G+ PN T S++ G V +A +
Sbjct: 363 PDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRI 422
Query: 379 I 379
+
Sbjct: 423 L 423
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F EM E L V FN L+ AL E +R+F + K G+ P+L T+N
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKR-GVCPNLFTFNI 335
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
I+ C+ A +L + R+ ++P+ ++ ++ G ++ + + + L M G
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN I CK +A +L + + KG KP+ TY + GFC+DG+ ++A
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ GL P+ VY T++ +C+ G AL E KG P+ T ++ GL
Sbjct: 456 AVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+S+A LIG + + ++ T+N + G
Sbjct: 516 CKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 148/325 (45%), Gaps = 2/325 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++ +N L E YFN + +K + + + I + + A+R + M
Sbjct: 192 SYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNM 251
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ A+ ++ D + +F E + + PD+ T+N+++ A C+
Sbjct: 252 PVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC-LCPDVTTFNKLVHALCKKGF 310
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ + ++ ++ + PN +F + G KE + ++L + R G++ V YN
Sbjct: 311 VLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNT 370
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I LC+ + EA+ L +M++ G +PN TY+ I G+CK G +A + + G
Sbjct: 371 VICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG 430
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
P+ Y ++V C+ GD + A+ K+ + KG P+ +L+ GL + A
Sbjct: 431 FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPAL 490
Query: 377 ELIGLVKEKFTK-NVDTWNEIEAGL 400
+L+ + EK K ++ T+N I GL
Sbjct: 491 QLMNEMAEKGCKPDIWTYNLIINGL 515
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 132/313 (42%), Gaps = 44/313 (14%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
SII+Y Q + A++ EM E + + +N ++ L + +
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL- 527
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I T G PD+ TYN ++ +C SA ++ M + + P+ ++ L+ G K
Sbjct: 528 IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCK 587
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K E+V ++ + M G + YN I SLC +K EA LL EM SKG+ P+ V+
Sbjct: 588 TAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVS 647
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMS----------------------------------- 313
+ I GFCK G+ + A +R M
Sbjct: 648 FGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM 707
Query: 314 -NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G P++ Y ++ CK G+ F E+I KG++P+ TT ++ L KV
Sbjct: 708 KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKV 767
Query: 373 SEAKELIGLVKEK 385
EA +I L+ +K
Sbjct: 768 QEAVGIIHLMVQK 780
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD TY ++ FC+ D A ++ + K ++P+ + L+ G ++
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G K + YN+ I+ LCK+ ++A L+ + ++KG P+ TY+ + G
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C+ + A + M + G++P+ Y T++ +CK E + K KG PN
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T +++ L + KV+EA +L+G +K K T +V ++ + G
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGF 655
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TYN VI C S A L +M +PN ++ +++ G+ K+ D
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N++L+ G K Y ++ C+ +A A+ + L KG++P+ + Y+ I G
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G A + M+ G P+ Y ++ +CK G A ++I KG +P+
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +LV G K+ A EL+ + + T +V T+N + GL
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 585
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P + YN +IK C+ A ++ EM K KP+ ++ ++ G K D
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N ++ G + YN + C+ K A L++ M S+GM P+ +TY+ + G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK EE + ++ M+ G +PN Y T++ +C A+ E +KG P+
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644
Query: 356 FTTMKSLVTGLAGASKVSEA 375
+ +L+TG + A
Sbjct: 645 VVSFGTLITGFCKVGDLDGA 664
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AVR + LR V +N ++ L E + + G +P+ TYN
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNG-GFEPNDFTYNS 405
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ A IL + K KP+ ++ +LV GF ++ + V + G
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ + +YN I LC+ A L++EM KG KP+ TY+ I G CK G +A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 525
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G P+ Y T+V C+ ++A+ ++G P+ T +L+ GL
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 585
Query: 367 AGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
+K E E+ + EK N+ T+N I
Sbjct: 586 CKTAKSEEVMEIFKAMTEKGCAPNIITYNTI 616
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 21/311 (6%)
Query: 61 ICRAAALTPESHL-----------DRLAFSIAINKLSEANYFNGISQYLEELKTR---PD 106
+C+ + P L D +++ IN L + + + + + T+ PD
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Query: 107 LQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ F ++++ Y + + A+ M + V +N LL L +EV
Sbjct: 540 I----FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVM 595
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+F + G P++ TYN +I++ C S + A +L EM K + P+ SFG L+ G
Sbjct: 596 EIFKAMTEK-GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654
Query: 226 FYKEEKYEDVNKVLQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
F K + + + ME+ Y + + YN+ I + + A L EM G P
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
++ TY I GFCK GN + KF G P+ + + ++ +C + A+G
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774
Query: 345 KESIAKGWVPN 355
+ K VP+
Sbjct: 775 HLMVQKDIVPD 785
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV EM L V +F L+ D +F K Y + TYN +I
Sbjct: 629 AVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 688
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AF E + A + +EM + P+ ++ L+ GF K K L G
Sbjct: 689 SAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFI 748
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
++ + ++ LC K EA ++ M+ K + P++V
Sbjct: 749 PSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM + ++ +N+L+ L ++K V + E + I PD+ T N V+
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTVV 227
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C+ + A+ ++ M + ++PN ++ AL+ G + + KV M
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ V YN I+ CK++ +A L +EM + + PN+VTY+ I+G C G ++A
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G P+ Y T+ ++CK + A+ K W P+ +++ G+
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A ++ +A++L L + NV T+N + GL
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 440
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 2/277 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ TF M + S FN LL ++ K + + + + ++GI PD+ T
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM-DSFGIPPDVYT 82
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
VI + C + A+S LA++ + +P+A++F L+ G E K + + M
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V Y I+ LCK R+ EA + EM++KG+ PN VTY+ I+G CK ++
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
M +S + P+ T+V +CK G A I +G PN T +L+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
G ++V A ++ +V + NV ++N + G
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 299
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 41/344 (11%)
Query: 72 HLDRLAFSIAI-----------NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY 120
HL RL ++ ++ + ++ NG+ + + + PD+ F +S+I +
Sbjct: 628 HLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITK-GISPDI----FTYNSLI-H 681
Query: 121 GQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALT------IAKDYKE--VKRVFIE 170
N+ E H EM K+ +V F+ ++ AL IA D + +KR
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR---- 737
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G++PD+ TY ++ C S+ A + M K PN S+ L+ G+ + +
Sbjct: 738 -----GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 792
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + +L+ M G+ + YN IH LC + + A AL EM++ G P+ VTY
Sbjct: 793 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 852
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ CK+ + EA + + S L + VY + MC+ G+ E A +K
Sbjct: 853 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK 912
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
G P+ T ++ GL + EA +L + E D W+
Sbjct: 913 GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN-----DIWS 951
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++G + E H EM + K+ V N ++ AL E V ++
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV-VDMMIHR 249
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ TYN ++ C ++ A + M K N S+ L+ G+ K + +
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R + YN IH LC + + +A +L EM+++G P+ VTY
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ + ++A + + S P+ +Y T++ MC+ G+ E A +KG PN
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T ++ GL ++EA +L + K + N T+N I G
Sbjct: 430 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 474
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 140 KLRHSVGA--FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
KL H A F L+ L + E +F + G +P++ TY +I C+
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE-GFQPNVVTYGTLINGLCKDRQV 166
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A++I +EM K I PN ++ +L+ G K +++ V ++ M + V N
Sbjct: 167 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVT----------------------------- 288
+ +LCK AEA ++D M+ +G++PN VT
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 289 ------YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
Y+ I G+CK + ++A + MS L+PN+ Y T+++ +C G + A+
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
E +A+G +P+ T ++L L + +A L+ ++ + ++ + I G+
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 405
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 23/277 (8%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ +F M S F LL ++ K Y V + + ++GI PD+ T
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGIPPDVYT 618
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE------------- 230
N +I +FC A+S+LA++ + +P+ ++G L+ G K
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNS 678
Query: 231 ---------KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+++ V +L M + V +++ + +LCK A A ++D M+ +G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ VTY+ + G C +EA K + M + G PN Y ++ C+ + A+
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G ++ +G + + T +L+ GL ++ A L
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 835
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + AV+ F M +V ++N L+ + + +F E + + P+ T
Sbjct: 269 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ-ELTPNTVT 327
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I C A S+ EM + P+ ++ L K + +L+ +E
Sbjct: 328 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ +Y + +C+ + +A+ L + SKG++PN TY+ I+G CK G
Sbjct: 388 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 447
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA K + M+ +G SPN Y + + + + +E +A+G+ + +T LV
Sbjct: 448 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507
Query: 364 TGLAGASKVSEAKELI 379
L+ K+++
Sbjct: 508 GMLSDDGLDQSVKQIL 523
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDL 181
+ AV+ F M +V ++N L+ Y +++R+ +E G+ D
Sbjct: 760 DEAVKVFDTMVHKGCVPNVRSYNILI------NGYCQIQRMDKAMGLLEQMSLQGLIADT 813
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I C A ++ EM P+ ++ L+ K + +L+
Sbjct: 814 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 873
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E + + + +YN+ I +C+ + A+ L + SKG++P+ TY+ I+G CK G
Sbjct: 874 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933
Query: 302 FEEAKKFYRIMSNSGLSPNSS 322
+EA K +R M + + NS+
Sbjct: 934 LDEANKLFRKMDENDIWSNST 954
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 14/225 (6%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + +++ + + S+ S+ +MD I P+ + L+ F + V
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L + + G + V Y ++ LCK M++KG+ P+ TY+ I+ C
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCN 685
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
++ M NS + PN V+ T+V +CK G A I +G P+ T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+L+ G S++ EA ++ +V + NV ++N + G Q
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 790
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y Q + A+ ++M L +N L+ L + +F E + G P
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS-GQIP 846
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY ++ C++ + A +L ++ ++ + + + G + + E +
Sbjct: 847 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 906
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ G++ V YN+ IH LCK EA L +M + NS +
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 158/342 (46%), Gaps = 10/342 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ ++PE++ F++ I L ++ + + +++ + NE + Y +A
Sbjct: 49 ASGVSPETY----TFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRA 104
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
T + EM + +N L+ + + +++ E K G+ PD+ T
Sbjct: 105 GFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD-GLSPDVVT 163
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSI----KPNASSFGALVAGFYKEEKYEDVNKVL 239
+N I A C S A I +M + +PN ++ ++ GF KE E+ +
Sbjct: 164 FNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALF 223
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+ YN+ + L ++ K EA+ +L EM+ GM+PN +Y+ + G CK+
Sbjct: 224 EKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKN 283
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +A+ R+M++SG+ P++ Y T+++ C G A +E + G PN T
Sbjct: 284 GVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTC 343
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
L+ L ++SEA+EL+ + EK + + T N + GL
Sbjct: 344 NILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGL 385
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 3/306 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+F I + A + + + L E++ N+ + I + + T+ A + EM
Sbjct: 93 SFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEM 152
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGI-KPDLDTYNRVIKAFCE 193
+ L V FNA + AL + E R+F ++ + G+ +P++ TYN ++ FC+
Sbjct: 153 RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCK 212
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A ++ +M N S+ + G + K + VL+ M GM+ V
Sbjct: 213 EGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYS 272
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LCK +A+ L+ M S G+ P++VTY+ ++G+C G EA R M
Sbjct: 273 YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMM 332
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G SPN+ ++Y + K G A ++ KG+V + T ++ GL K+
Sbjct: 333 RDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLD 392
Query: 374 EAKELI 379
+A E++
Sbjct: 393 KAIEIV 398
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 29/331 (8%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLAL 155
E++K +L N +++I L G + + A KEM + + +V ++N ++ L
Sbjct: 223 FEKMKVSENLMNR--ESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGL 280
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ R+ + + G+ PD TY ++ +C + S A ++L EM R PN
Sbjct: 281 CKNGVLFDA-RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPN 339
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ L+ +KE + + ++LQ M G N+ I LC K +A +++
Sbjct: 340 NYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVN 399
Query: 276 EMLSKG-----------------------MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
M + G P+ ++YS I G CK G EAKK + M
Sbjct: 400 GMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEM 459
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
L P+S++Y ++ CK G +A K+ KG T SL+ GL +++
Sbjct: 460 MGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQI 519
Query: 373 SEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
E LI ++E+ + +V +N + + L +
Sbjct: 520 FEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+++ ++ L A E K+ FIE ++PD Y+ I +FC+ SSA+ +L +
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGK-NLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M++K ++ +L+ G + + ++ ++ M G+ VS+YN + SLC+ +
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+A ++LDEML KG+ PN ++S I FCK +F + + I N
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALN 601
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PDL +Y+ +I C++ A EM K+++P+++ + + F KE K +V
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ ME+ G + YN I L + E L+DEM +G+ P+ Y++ + C+
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-------YETALGFC--KESIA 349
G ++A M G+SPN S + ++ CK D +E AL C KE++
Sbjct: 551 GGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALY 610
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
T L+ G +V +AKEL
Sbjct: 611 S------LTFNELLVG----GEVVKAKEL 629
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 41/276 (14%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D +++S I+ L +A + E+ +PD HS G+ + A
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS---SAF 488
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R K+M++ ++ +N+L++ L E+ + E + G+ PD+ YN V+ +
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEM-RERGVSPDVSIYNNVLSS 547
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM-MERYGMKS 249
CE A S+L EM +K I PN SSF L+ F K + V+++ ++ + G K
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKE 607
Query: 250 ---------------------------------GVSMYNVRIHSLCKLRKCAEAKALLDE 276
G +Y I LCK K +A +L +
Sbjct: 608 ALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHK 667
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
++ KG + ++ I G K GN EA + M
Sbjct: 668 LIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%)
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
RK P+ S+ +++G K + + K M ++ ++Y+V IHS CK K +
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A +L +M KG TY+ I G E M G+SP+ S+Y ++
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+C+GG + A E + KG PN ++ L+ A S E+
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEI 595
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ + L+ KE + + V+ + + M G+ +NV I LC +A+ L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
D+M KG +PN ++ + G+C+ G + + M G SPN VY T++ CK
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA---------KELIGLVKE 384
G + A E G P+ T + ++ L + KV EA E++GL +
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ- 197
Query: 385 KFTKNVDTWNEIEAGL 400
N+ T+N + G
Sbjct: 198 ---PNIITYNLMLGGF 210
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G+ PD Y VI FC + S A + EM P+ ++ L+ G KE +
Sbjct: 8 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 67
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
D +L M G+ + + IH C K +A L D ML++ ++P+ VTY+
Sbjct: 68 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 127
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C+ G+ ++A + M + + PN Y ++ C+ G E A GF E I KG
Sbjct: 128 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 187
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+PN T S++ G + VS+ ++ + ++ K + ++ T+N + G
Sbjct: 188 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ TYN ++ C+ A +L EM + + P+ +F L+ G+ E K +
Sbjct: 46 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 105
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M ++ + YN I +C+ +A L D+M S+ + PN VTYS I
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 165
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G E+A F M N G+ PN Y +++ C+ G+ F ++ + P+
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
T +L+ G K+ +A +L+ ++ KEK +V T+N + G
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 271
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 7/285 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ +N L + L E++ R PDL H + G+ + A+
Sbjct: 50 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK---LDKAL 106
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F M +LR + +N L+ + D + ++ + + I P+ TY+ +I +
Sbjct: 107 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDS 165
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
CE A+ L EM K I PN ++ +++ G+ + K LQ M +
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN IH K K +A LL+ M + ++P+ VTY+ I GF GN +EA +
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 285
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M G+ P+ Y +M+ G+ + A E + +G+ P+
Sbjct: 286 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 1/246 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM E + + F L+ I + ++F ++PD+ TYN +I C
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR-LRPDIVTYNTLIDGMC 132
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D A + +M + I PN ++ L+ ++ + ED L M G+ +
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C+ ++ + L +M+ + P+ +TY+ I+G+ K+ +A K +M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ P+ Y ++ G+ + A ++ AKG P+ T S++ G A
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312
Query: 373 SEAKEL 378
EA +L
Sbjct: 313 KEAFQL 318
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
A L EM G+ P+ V Y+ I GFC+ G +A + M G P+ Y T++ +
Sbjct: 2 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 61
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
CK A G E +G P+ T +L+ G K+ +A +L ++ ++ ++
Sbjct: 62 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121
Query: 391 DTWNEIEAGL 400
T+N + G+
Sbjct: 122 VTYNTLIDGM 131
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 2/281 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E A+R +KEM ++ V +F+ L+ T + E + +G+ P
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM-REFGLMP 332
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D Y VI FC + A + EM P+ ++ L+ G KE + D ++L
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G+ + + IH C+ +A D + + ++P+ VTY+ I G C+
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ +A + + M + + PN Y ++ C+ G + A F E + KG VPN T
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTY 512
Query: 360 KSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAG 399
S++ G + VS+ ++ + ++ +K ++ T+N + G
Sbjct: 513 NSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 159/379 (41%), Gaps = 12/379 (3%)
Query: 26 SILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL 85
S++S G K L + + L ++ A + P D +F++ I
Sbjct: 219 SMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAP----DVRSFNMLIGGF 274
Query: 86 SEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
A ++ +E++ R PD+ + + I L+ + +HA +EM E L
Sbjct: 275 CRAGELEEALRFYKEMRGRRVTPDVVS---FSCLIGLFTRRGEMDHAAEYLREMREFGLM 331
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+ ++ A E RV E +G PD+ TYN ++ C+ S A
Sbjct: 332 PDGVIYTMVIGGFCRAGLMLEALRVRDEM-VAFGCLPDVVTYNTLLNGLCKERRLSDAEE 390
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L EM + + P+ +F L+ G+ ++ E + + ++ + YN I +C
Sbjct: 391 LLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMC 450
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ +A L D+M S+ + PN VTYS I C+ G + A F M N G+ PN
Sbjct: 451 RQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIM 510
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y +++ C+ G+ F + +P+ T +L+ G K+ EA L+ ++
Sbjct: 511 TYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIM 570
Query: 383 K-EKFTKNVDTWNEIEAGL 400
+ E + T+N I +G
Sbjct: 571 ENENVQPDAVTYNMIISGF 589
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ EV V E K + PD+ T+N ++ A + D +A +++ M K IKP ++
Sbjct: 175 FGEVDTVISEMEKRC-VFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYN 233
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+++ G + +++ +V + M+ G+ V +N+ I C+ + EA EM +
Sbjct: 234 SVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR 293
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ P+ V++S I F + G + A ++ R M GL P+ +Y ++ C+ G A
Sbjct: 294 RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEA 353
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
L E +A G +P+ T +L+ GL ++S+A+EL+ +KE+
Sbjct: 354 LRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 5/313 (1%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R +TP D ++FS I + + ++YL E++ + + + I + +
Sbjct: 291 RGRRVTP----DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCR 346
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A + A+R EM V +N LL L + + + + E K G+ PDL
Sbjct: 347 AGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM-KERGVPPDLC 405
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T+ +I +C + A + + ++P+ ++ L+ G ++ N++ M
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ Y++ I S C+ + A A LDEM++KG+ PN +TY+ I G+C+ GN
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ ++F M + + P+ Y T+++ K G A K + P+ T +
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMI 585
Query: 363 VTGLAGASKVSEA 375
++G + + EA
Sbjct: 586 ISGFSVHGNMQEA 598
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 7/285 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ +N L + + + L E+K R PDL H Y + E A+
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHG---YCRDGNIEKAL 424
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F + + +LR + +N L+ + D + ++ + + I P+ TY+ +I +
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM-HSREIFPNHVTYSILIDS 483
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
CE +A++ L EM K I PN ++ +++ G+ + + L M +
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN IH K K EA LL M ++ ++P++VTY+ I GF GN +EA Y+
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M G+ P+ Y +M+ G+ + + E + KG P+
Sbjct: 604 KMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N + +V + K ++ +V+ V+ ME+ + V +NV + + + A AL+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
D M+SKG+KP VTY+ + G ++G +++A++ +R M G++P+ + ++ C+
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G+ E AL F KE + P+ + L+ ++ A E + ++E
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 14/331 (4%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG-------QANMTEHA 129
A ++ +++L + + ++ + +L+ DL+N+ A + +Y + +E A
Sbjct: 172 ALAVCLDRLVSSRCPDVLADLIADLR---DLRNKYLPAPNTCVYNILIKHYVKNGDSETA 228
Query: 130 VRTFKEMDEH---KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
R EM E+ +R ++ ++ LL L A KE +F + I PD TYN
Sbjct: 229 FRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNV 288
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC A +I M + +PNA ++ L+ G K+ E+ V + M G
Sbjct: 289 IIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAG 348
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ Y I LC+ E L+ EM KG K + VTY+ + G CKDG E
Sbjct: 349 VEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVM 408
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ G+ N + Y ++ +C GD E A+G + +G++P++ L+ GL
Sbjct: 409 DLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGL 468
Query: 367 AGASKVSEA-KELIGLVKEKFTKNVDTWNEI 396
+V++A L GL K F W ++
Sbjct: 469 CDVGRVADATAALYGLAKFGFMPEASCWAKL 499
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
D + K VF E ++ G++PD +Y +I C ++ EM K K + ++
Sbjct: 333 DVENAKLVFEEM-RSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTY 391
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ G K+ + +V +L + G++ V+ Y + +++LC +A LL ML
Sbjct: 392 NLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLG 451
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+G P+ + + G C G +A ++ G P +S + ++ +C+
Sbjct: 452 RGFLPHYAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCR 505
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 101/246 (41%), Gaps = 7/246 (2%)
Query: 74 DRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D+L +++ I+ +L + I ++ + + P+ N +A I + + E+A
Sbjct: 282 DQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFN---YATLINGHCKKGDVENAK 338
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F+EM + ++ AL+ L E + +E + G K D+ TYN +++
Sbjct: 339 LVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEM-REKGCKADVVTYNLLLEG 397
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + +L + + ++ N +S+ ++ E +L +M G
Sbjct: 398 LCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPH 457
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ N + LC + + A+A A L + G P + ++ I C+D + +
Sbjct: 458 YAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELLD 517
Query: 311 IMSNSG 316
I+ G
Sbjct: 518 ILITGG 523
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 11/318 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN L + F + +++ +PD+ + ++ I+ G + E A
Sbjct: 164 VTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDV-----YTYNTIINGLCKIGETAAAA 218
Query: 133 --FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
K+M+E + ++ ++ L+ +L + E +F + K GI PD+ TY +I+
Sbjct: 219 GLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF-SYMKAKGISPDIFTYTSLIQG 277
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ S A ++L EM +I P+ +F LV F KE K + VL+ M G++
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y+ ++ EA+ L M++KG KPN +Y+ I G+CK +EA + +
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFN 397
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + GL+PN+ Y T+++ C+ G A + G +P+ T L+ G
Sbjct: 398 EMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQG 457
Query: 371 KVSEAKELIGLVKEKFTK 388
+ +A L ++ + K
Sbjct: 458 YLGKAFRLFRAMQSTYLK 475
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 2/263 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L+ ++ F L+ L ++ + +F + G +PD+ TYN +I C+ ++++A
Sbjct: 159 LQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK-GCQPDVYTYNTIINGLCKIGETAAA 217
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+L +M+ +PN ++ L+ ++ + + M+ G+ + Y I
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK + EA ALL+EM S + P+ VT++ + FCK+G EA + M+ G+ PN
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y +++Y D A I KG PN + L+ G A ++ EA +L
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFN 397
Query: 381 -LVKEKFTKNVDTWNEIEAGLPQ 402
++ + T N ++N + G Q
Sbjct: 398 EMIHQGLTPNNVSYNTLIHGFCQ 420
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 145/342 (42%), Gaps = 42/342 (12%)
Query: 74 DRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D ++ IN K+ E G+ + +EE +P++ S+ + + A+
Sbjct: 197 DVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC---RDRLVNEAL 253
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F M + + + +L+ L +KE + E + I PD+ T+N ++
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM-TSLNIMPDIVTFNVLVDT 312
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC+ S A +L M ++PN ++ +L+ G+ + K+ +M G K
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV----------------------- 287
+ YN+ I+ CK ++ EA L +EM+ +G+ PN+V
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 288 ------------TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
TYS + GFCK G +A + +R M ++ L PN +Y +V+ MCK G
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+++ A E +G P+ +++ GL + EA E
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALE 534
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 1/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ +F M K + F LL A+ Y +V + + G+ P++ T +
Sbjct: 74 DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ FC+ +S+LA++ + ++P +F L+ G K ++ ++ M G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I+ LCK+ + A A LL +M G +PN VTYS I C+D EA
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G+SP+ Y +++ +CK ++ A E + +P+ T LV
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
KVSEA ++ + E + NV T++ + G
Sbjct: 314 CKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG 347
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ K M E + +V +++L+ ++ D E +++F T G KP++ +YN +I
Sbjct: 322 ALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF-HVMITKGCKPNIFSYNILI 380
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ A + EM + + PN S+ L+ GF + K + + + M G
Sbjct: 381 NGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNL 440
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y++ + CK +A L M S +KPN V Y+ ++ CK GN ++A+K
Sbjct: 441 PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKL 500
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + GL P+ +Y T++ +CK G + AL + A G P+ + ++ GL
Sbjct: 501 FSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQ 560
Query: 369 ASKVSEAKELIGLVKEK 385
S A L+G ++++
Sbjct: 561 HKDESRALLLVGEMRDR 577
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P + T+ +I C+ + + A + +M K +P+ ++ ++ G K +
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME G + + Y+ I SLC+ R EA + M +KG+ P+ TY+ I G
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK ++EA M++ + P+ + +V CK G ALG K G PN
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
T SL+ G + + V EA++L ++ K K N+ ++N + G
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 135/290 (46%), Gaps = 17/290 (5%)
Query: 74 DRLAFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE 127
D + F++ ++ K+SEA G+ + + E+ P++ +S ++YG + T+
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEAL---GVLKTMTEMGVEPNVV-----TYSSLMYGYSLWTD 353
Query: 128 --HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
A + F M + ++ ++N L+ AK E ++F E G+ P+ +YN
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ-GLTPNNVSYN 412
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ A + M P+ ++ L+ GF K+ ++ + M+
Sbjct: 413 TLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQST 472
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+K + MY + +H++CK +A+ L E+ +G++P+ Y+ I G CK+G +EA
Sbjct: 473 YLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ +R M G P+ Y ++ + + D AL E +G++ +
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 6/325 (1%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAV 130
LD + ++ I+ + ++Q L ++ R ++ + + + +I L + + E A
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VRENVDPDDYTFNILIDALCKEGRILE-AQ 285
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M + + + +NAL+ ++ E + +F K G++PD+ YN +I
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR-GLEPDVLNYNVLIDG 344
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ A + E+ K++ P +S+ +L+ G + V K+L M
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN+ I +LCK + EA +L M+ KG+KPN VTY+ + G+C N AK +
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M SGL P+ Y ++ CK + A+ KE K +P+ + SL+ GL
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWN 394
++ +EL+ + + +V T+N
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYN 549
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 3/275 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M + A+ FKE+ L ++ ++N+L+ L + VK++ E + P
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS-AQPP 403
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I A C+ A +L M +K +KPN ++ A++ G+ +
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G++ + YNV I+ CK EA L EM K + P+ +Y+ I G C
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++ M +SG SP+ Y ++ CK ++ A+ ++ + W P+F T
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTN 582
Query: 360 KSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTW 393
++V L K+ A++ L L+ + NV T+
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 149/345 (43%), Gaps = 5/345 (1%)
Query: 57 KILEICRAAALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
K L+ C+ L + +L D+ + IN LS+ L+E++ N ++
Sbjct: 143 KALDFCQN--LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I + A+ ++ E + +N+L+ ++EV ++ + +
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE- 259
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ PD T+N +I A C+ A +LA M ++ KP+ ++ AL+ G+ E +
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G++ V YNV I CK + EA L E+ +K + P +Y+ I G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G KK M S P+ Y ++ +CK G ALG + KG PN
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +++ G + V+ AK++ +VK ++ +N + G
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 37/310 (11%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F M F+ LL A+ Y +F + ++ GI P + T+
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQL-QSKGISPSIATFT 94
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF-------------------------- 219
+I + S ++ A+S+LA + + +PN +F
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 220 ---------GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
G L+ G K + + +LQ ME+ ++ + MY+ I LCK ++A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
L ++ +G+ ++VTY+ I G C G ++E + M + P+ + ++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKN 389
+CK G A G +G P+ T +L+ G V EA+EL +VK +
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 390 VDTWNEIEAG 399
V +N + G
Sbjct: 335 VLNYNVLIDG 344
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 35/259 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ M + ++ ++ +NA++ + + K +F K+ G++PD+ YN +I
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS-GLEPDILNYNVLI 482
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ A + EM K++ P+ +S+ +L+ G + V ++L M G
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542
Query: 249 SGVSMYNVRIHSLCK----------LRKCAE------------------------AKALL 274
V YN+ + + CK R+ E A+ L
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDAL 602
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+L G PN TY+ I CKDG+F EA M ++ P++ + ++ + +
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662
Query: 335 GDYETALGFCKESIAKGWV 353
+ + A +E IA+G V
Sbjct: 663 NETDKAEKLREEMIARGLV 681
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 36/239 (15%)
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A + M R P S F L+ + Y + ++ G+ +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC-------------- 297
+ + + I+ A A +LL +L G +PN VT++ I GFC
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 298 ---------------------KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
K+G + A + M S + PN +Y ++ +CK G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
ALG C + +G + + T SL+ G + E +L+ +V+E + T+N
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +FSI I+ L + ++ QN + + I +N E
Sbjct: 456 DTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLL 515
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM R + N++ L +D + E + +G +P + Y ++K C+
Sbjct: 516 KEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREM-RVHGHEPWIKHYTLLVKQLCK 574
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S+ A + LAEM R+ P+ ++ A + GF K + + ++ + + G V
Sbjct: 575 RKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVA 634
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I+ CK+++ +EA +LDEM++KG+ P+ VTY+ I G+CK+G+ ++A M
Sbjct: 635 YNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMV 694
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
PN Y T++ +C G + A+ E KG PN + +L+ GL
Sbjct: 695 GKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC 748
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 8/278 (2%)
Query: 103 TRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
RPD + SI++ G N + A+ F++M + +V +N L+ L+ +
Sbjct: 453 VRPDTT-----SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 507
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+E + E K G +P T+N + C D + A ++ EM +P +
Sbjct: 508 LEECYLLLKEM-KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYT 566
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
LV K ++ + L M R G + Y+ I K++ +A + ++ ++
Sbjct: 567 LLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICAR 626
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G P+ V Y+ I GFCK EA M GL P+ Y ++ CK GD + A
Sbjct: 627 GYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQA 686
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ K PN T +L+ GL A + +A L
Sbjct: 687 FHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHL 724
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L LAL++ +D V G K ++ YN +I S+ Y +L EM
Sbjct: 473 LDLALSLFRDMVRV-----------GCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 521
Query: 211 SIKPNA----SSFGALVAGFYKEEKYEDVNKVLQM---MERYGMKSGVSMYNVRIHSLCK 263
+P S FG L + EDV L M M +G + + Y + + LCK
Sbjct: 522 GFRPTQFTHNSIFGCLC-------RREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCK 574
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
++ AEA L EM+ +G P+ V YS I GF K ++A + +R + G P+
Sbjct: 575 RKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVA 634
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
Y T++ CK A E +AKG VP+ T L+ G + +A + +V
Sbjct: 635 YNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMV 694
Query: 383 KEKFTKNVDTWNEIEAGL 400
++ NV T+ + GL
Sbjct: 695 GKEREPNVITYTTLIDGL 712
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 8/225 (3%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD +++ VI C + A S+ +M R K N + L+ + E+
Sbjct: 453 VRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECY 512
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L+ M+ G + +N LC+ A ++ EM G +P Y+ +
Sbjct: 513 LLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 572
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK EA F M G P+ Y + K + AL ++ A+G+ P+
Sbjct: 573 CKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDV 632
Query: 357 TTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN--VDTW 393
+L+ G +VSEA +++ GLV T N +D W
Sbjct: 633 VAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGW 677
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 137/378 (36%), Gaps = 51/378 (13%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+D SI + S+ + + +E ++ NE+ I + + + + A++
Sbjct: 266 VDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQL 325
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD------------ 180
FK+M + V ++AL+ L K+ ++ + E K GI PD
Sbjct: 326 FKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEM-KELGIDPDIQILSKLIAYCS 384
Query: 181 ---------------LDT------YNRVIKAFCESSDSSSAYSILAEMD----------- 208
LDT YN V+ AY +L M
Sbjct: 385 EEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVN 444
Query: 209 -----RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
++ ++P+ +SF ++ G K + + + M R G K V +YN I L
Sbjct: 445 KFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSN 504
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ E LL EM G +P T++ C+ + A R M G P
Sbjct: 505 SNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKH 564
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
Y +V +CK A F E + +G++P+ + + G V +A E+ +
Sbjct: 565 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 624
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ +V +N + G
Sbjct: 625 ARGYCPDVVAYNTLINGF 642
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 5/212 (2%)
Query: 121 GQANMTEHAVRTFKEMDEHKL-RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
G + E A F ++ +L + +FN LL A++ + V+ E + G +P
Sbjct: 174 GSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDS-GWEP 232
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D T V++A+C S A S+ E+ R + + S LV F K + + ++
Sbjct: 233 DKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSI--LVLTFSKCGEVDKAFEL 290
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
++ ME G++ + V IH + + +A L +M G P+ Y I G C
Sbjct: 291 IERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCA 350
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
E+A M G+ P+ + ++ +
Sbjct: 351 KKEIEKALHLLSEMKELGIDPDIQILSKLIAY 382
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 269 EAKALLDEM-LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA L D++ + + PNS +++ + K G+ + + + M +SG P+ ++
Sbjct: 181 EANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSV 240
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ C ++ AL E +GWV + LV + +V +A ELI
Sbjct: 241 LQAYCNSRKFDKALSVFNEIYGRGWVDGH-VLSILVLTFSKCGEVDKAFELI 291
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 3/256 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ AK E + +F K +P+L TY+ +I +C+S + +L EM
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+R+ +K + + +L++ F E E ++ M R + V Y+ + L + +
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA +L +M ++G++P+ V Y+ G CK+G +A K +M G P + Y +
Sbjct: 272 REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKF 386
V +CK + A G + + KG P+ T +L+ GL GA K+ EA +L L+ EKF
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF 391
Query: 387 --TKNVDTWNEIEAGL 400
+V T N + GL
Sbjct: 392 HVKPDVFTCNNLIQGL 407
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
A + L+ L A+ Y V V+ + + P + + + ++F + S A+S+L+
Sbjct: 44 ACSTLIDNLRKARQYDAVVSVYHKMVSAL-VLPRFTSLSALTESFVNTHHPSFAFSVLSL 102
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY--GMKSGVSMYNVRIHSLCKL 264
M ++ N + ++ GF + + + + M+R + YN ++ CK
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162
Query: 265 RKCAEAKALLDEMLSKG-MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
++ AEA+ L + M G +PN VTYS I +CK G E M GL + V
Sbjct: 163 KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFV 222
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y +++ C GD ET E + + PN T L+ GL + EA E++
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 9/236 (3%)
Query: 148 FNALLLALTIAKDYKEVKRVF-IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N LL L A E ++ + + + +KPD+ T N +I+ C+ A I +
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSS 422
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS----MYNVRIHSLC 262
M ++ N ++ L+ G+ K + K + +Y ++SG S Y+V I+ LC
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALK----LWKYAVESGFSPNSMTYSVMINGLC 478
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K++ + A+ L +M G++P + Y+ + C++ + E+A+ ++ M N + +
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ ++ K GD ++A E VP+ T L+ + + EA L
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGL 594
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+ S+ +M + P +S AL F VL +M + G V N+ +
Sbjct: 60 AVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVL 119
Query: 259 HSLCKLRKCAEAKALLDEMLSK--GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
C+ +C +A +L +M + P+ VTY+ + GFCK EA+ + M G
Sbjct: 120 KGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGG 179
Query: 317 -LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
PN Y ++ CK G+ LG +E +G + SL++ G +
Sbjct: 180 DCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETG 239
Query: 376 KELIG-LVKEKFTKNVDTWNEIEAGL 400
+EL +++ K + NV T++ + GL
Sbjct: 240 RELFDEMLRRKVSPNVVTYSCLMQGL 265
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 6/231 (2%)
Query: 99 EELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
E+ +PD+ F +++I + A R M E L+ ++ +N L+
Sbjct: 389 EKFHVKPDV----FTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLA 444
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A+ E +++ ++ G P+ TY+ +I C+ S A + +M I+P
Sbjct: 445 ARKLIEALKLW-KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVI 503
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+ AL+ +E+ E + Q M V +N+ I K AK LL EM
Sbjct: 504 DYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ P++VT+S I F K G +EA Y M + G P V+ +++
Sbjct: 564 FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + +EE+ R +++I Y N + E +
Sbjct: 224 DVVSYNAVLKGLCMAKRWGRVQDLMEEM-VRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M +H + + A +L + + EV ++ +YG+KP++ YN V+K C
Sbjct: 283 LAQMVDHGCTPDIRMY-ATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLC 341
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +LAEM + +F LV F + V ++L+ M +G V
Sbjct: 342 SAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVI 401
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M + G +PN+++Y+ + G C + +A+ M
Sbjct: 402 TYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM 461
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G SPN + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 462 IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKT 521
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I + L
Sbjct: 522 DEALELLNVMVNKGMSPNTIIYSSIASAL 550
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
AVR +++ VG N +L A+ E R+ + P ++G PD+ +YN V
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K C + ++ EM R PN +F L+ + +E V++VL M +G
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ MY + +CK A +LD M S G+KPN V Y+ + G C +E+A++
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M ++ + + +V F C+ G + ++ + G VP+ T +++ G
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411
Query: 368 GASKVSEAKELI 379
+ EA L+
Sbjct: 412 KEGLIDEAVMLL 423
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 133/303 (43%), Gaps = 1/303 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I L F + Q L ++ + R +A + + E A
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + L+ +V +N +L L A+ +++ + + E D+ T+N ++ FC++
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV-TFNILVDFFCQNG 379
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+L +M P+ ++ ++ GF KE ++ +L+ M G + Y
Sbjct: 380 LVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYT 439
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + LC + +A+ L+ +M+ +G PN VT++ I CK G E+A + + M +
Sbjct: 440 IVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G SP+ Y T++ + K G + AL + KG PN S+ + L+ +++
Sbjct: 500 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRV 559
Query: 376 KEL 378
++
Sbjct: 560 IQM 562
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ +Y V+K C + A ++++M + PN +F ++ K+ E
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ M G + Y+ I L K K EA LL+ M++KGM PN++ YS
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+G + + + + + ++ +Y ++ +CK G + A+ F ++ G +PN
Sbjct: 550 LSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPN 609
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+T L+ GLA V EA+E++ G +++ F K+
Sbjct: 610 ESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKH 649
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 44/272 (16%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+NA++ A +R+ P + P+ TY V++A C + A S+L EM
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP----VPPNAYTYFPVVRALCARGRIADALSVLDEM 141
Query: 208 DRKSIKPNASSFGALVAGFYKE------------------------------------EK 231
R+ P + ++ ++
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201
Query: 232 YEDVNKVLQMME----RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
V++ L+++ +G V YN + LC ++ + L++EM+ G PN V
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I C++G FE + M + G +P+ +Y T++ +CK G E A
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G PN +++ GL A + +A+EL+
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KPD YN +I C++ + A +L M + + P+ + +++GF K
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M R + + Y IH +CK K EA+ + +EML KG++P+ VTY+ I G
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G +EA + M GL+PN Y + +CK G+ + A E KG PN
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T ++V GL + + +L+
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLM 510
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F EM K+ + + +++ + + E + +F E G++PD TY +I
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM-LVKGLEPDEVTYTALI 424
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ + A+S+ +M +K + PN ++ AL G K + + N++L M R G++
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN ++ LCK+ + L++EM G P+++TY+ + +CK G +A +
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
RIM N L P + ++ C G E + + KG +PN TT SL+
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 4/258 (1%)
Query: 131 RTFKEMDEHK---LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+ K +DE K L+ +N ++L L + E +++ K +G+ PD Y V
Sbjct: 295 KVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRK-WGVFPDNVVYTTV 353
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I FC+ + S+A + EM RK I P+ ++ +++ G K K + ++ M G+
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y I CK + EA ++ ++M+ KG+ PN VTY+ G CK+G + A +
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
MS GL PN Y T+V +CK G+ E + +E G+ P+ T +L+
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533
Query: 368 GASKVSEAKELIGLVKEK 385
++++A EL+ ++ K
Sbjct: 534 KMGEMAKAHELLRIMLNK 551
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV+ F+E E + + + N +L L +E + ++ G PD+ +Y V+
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDR-GNFPDVVSYGVVV 284
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + ++ E+ K +KP+ + ++ K + + ++L+ M ++G+
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y I CKL + A L DEM K + P+ VTY+ I+G CK G EA++
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M GL P+ Y ++ CK G+ + A + + KG PN T +L GL
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++ A EL+ + K NV T+N I GL
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGL 497
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 11/323 (3%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERF 112
E++L R + P D + ++ I+ + + + +E++ + PD+
Sbjct: 332 EQLLRGMRKWGVFP----DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
H I G+ M E A F EM L + AL+ A + KE V +
Sbjct: 388 VIHGICKSGK--MVE-AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV 444
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ P++ TY + C++ + A +L EM RK ++PN ++ +V G K
Sbjct: 445 QK-GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI 503
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E K+++ M+ G Y + + CK+ + A+A LL ML+K ++P VT++
Sbjct: 504 EQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVL 563
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ GFC G E+ ++ M G+ PN++ + +++ C + K +G
Sbjct: 564 MNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGV 623
Query: 353 VPNFTTMKSLVTGLAGASKVSEA 375
+P+ T L+ G A + EA
Sbjct: 624 MPDSNTYNILIKGHCKARNMKEA 646
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 7/272 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A +M + L +V + AL L + + E + G++P
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQP 485
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C+ + ++ EMD P+ ++ L+ + K + +++L
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++M ++ + +NV ++ C + + L++ ML KG+ PN+ T++ + +C
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N + Y+ M + G+ P+S+ Y ++ CK + + A KE + KG+ T
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEK 385
+L+ G K EA++L GLV EK
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEMRKHGLVAEK 697
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P L T+N ++ FC S ++ M K I PNA++F +L+ + +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + M G+ + YN+ I CK R EA L EM+ KG + TY I GF
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
K F EA+K + M GL +Y V + G++E L C E
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 7/254 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
TE + T+K+ H L F+ L E +++F + + YG+ +D+ N
Sbjct: 157 TEMLIYTYKDWGSHPL-----VFDLYFQVLVENGFVLEAQKLFHKLLR-YGVVVSVDSCN 210
Query: 186 RVIKAF-CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ C A + E + N S ++ + K + + +L M
Sbjct: 211 LFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTD 270
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V Y V + C++ + + L+DE+ KG+KP+ Y++ I CK+G E
Sbjct: 271 RGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVE 330
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A++ R M G+ P++ VY T++ CK G+ A E K VP+ T S++
Sbjct: 331 AEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIH 390
Query: 365 GLAGASKVSEAKEL 378
G+ + K+ EA+E+
Sbjct: 391 GICKSGKMVEAREM 404
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + M E R + M E + + FN+L+ I + + ++ G+ P
Sbjct: 567 FCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAM-HDRGVMP 625
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D +TYN +IK C++ + A+ + EM K A+++ AL+ GFYK +K+ + K+
Sbjct: 626 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M ++G+ + +Y++ + + L DE +++ V Y F G +
Sbjct: 686 EEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVYICFFIGGSVE 745
Query: 300 GNFE 303
NF+
Sbjct: 746 SNFD 749
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 143/305 (46%), Gaps = 9/305 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+++ PD++ + +I++ G + E A++ +KEM + + V +F+ L+ L
Sbjct: 253 MDQCSVAPDVR-----SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GL 306
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + ++ K G+ PD Y VI FC + S A + EM P+
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G K+ + D ++L M+ G+ + + IH C+ +A L D
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+L + ++P+ V Y+ I G C+ G+ +A + + M + PN Y ++ C+ G
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
E A GF E ++KG +PN T S++ G + V + ++ + ++++ ++ T+N
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546
Query: 395 EIEAG 399
+ G
Sbjct: 547 TLIHG 551
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ T+N +I A + D +A +++ M K +KP +F +++ G K +++ +V
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M++ + V +N+ I C++ + EA EM +G+ P+ V++S I F
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G + A + R M GL P+ +Y ++ C+ G AL E + G +P+ T
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
+L+ GL ++ +A+EL+ +KE+
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKER 396
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 8/333 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D +F+I I ++ +E++ R PD+ + + I L+ +HA
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVS---FSCLIGLFSTRGKMDHAA 317
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+EM L + ++ A E RV E G PD+ TYN ++
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM-VGLGCLPDVVTYNTLLNG 376
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A +L EM + + P+ +F L+ G+ ++ +E ++ + ++
Sbjct: 377 LCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I +C+ A+A L D+M ++ + PN VTYS I C+ G EEA F
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + G PN Y +++ C+ G+ + F ++ + +P+ T +L+ G
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556
Query: 371 KVSEAKELIGLV-KEKFTKNVDTWNEIEAGLPQ 402
+ A + ++ KE + T+N I G +
Sbjct: 557 NMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSE 589
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP + T+N V+K C+ A + MD+ S+ P+ SF L+ GF + + E+
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K + M++ G+ V ++ I K A A L EM G+ P+ V Y+ I G
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGG 341
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G+ EA + M G P+ Y T++ +CK A E +G P+
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G +A +L L+ ++ +V +N + G+
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 7/285 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ +N L + + + L E+K R PDL H Y + E A+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHG---YCRDGNFEKAL 422
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ F + +LR V A+N+L+ + D + ++ + I P+ TY+ +I +
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM-HAREIFPNHVTYSILIDS 481
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
CE A+ L EM K PN ++ +++ G+ + + + LQ M + +
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +N IH K A + + M + ++P++VTY+ I GF + GN EEA + ++
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M SG+ P+ Y +++ G+ + A E + +G+ P+
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T N ++ ++C+S + A ++++EM+++ + P+ + L+ ++ + ++ M
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+K G+ +N + LCK R+ +AK + M + P+ +++ I GFC+ G
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EEA KFY+ M G++P+ + ++ G + A + +E G VP+ +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338
Query: 363 VTGLAGASKVSEA----KELIGLVKEKFTKNVDTWNEIEAGL 400
+ G A +SEA E++GL +V T+N + GL
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGL---GCLPDVVTYNTLLNGL 377
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD+ YN +I C D + A + +M + I PN ++ L+ ++ + E+
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
L M G + YN I C+ + + L +M+ + P+ +T++ I+G+
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K+ N A + IM + P++ Y ++ + G+ E A K+ A G P+
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612
Query: 357 TTMKSLVTGLAGASKVSEAKEL 378
T SL+ G A EA +L
Sbjct: 613 YTYMSLINGHVTAGNSKEAFQL 634
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E + +V ++A++ +L + + + +F E + GI PDL TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I P+ ++ AL+ F KE K+ + ++ M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ Y+ I CK + A+ + M +KG PN +T++ I G+C ++
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M+ +GL +++ Y T+++ GD AL +E I+ G P+ T +L+
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVD 391
GL K+ +A E+ V +K K++D
Sbjct: 474 GLCDNGKLKDALEMFK-VMQKSKKDLD 499
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV F L+ + + V ++ + + I+ D+ ++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDIYSFTI 119
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G E++ + + M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P +TY + G CK G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + A E KG P+ T S++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S+A++L+ +++ K + +V T+N +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 3/273 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ TF ++ + L V FN LL L + E +F + +T +P++ T+ ++
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLM 191
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE-EKYEDVNKVLQMMERYGM 247
C A ++L M ++P ++G +V G K+ + +N + +M E +
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V +Y+ I SLCK + ++A+ L EM KG+ P+ TY+ I GFC G + +A++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M +SP+ Y ++ K G + A E + +G +PN T S++ G
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 368 GASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+++ A+ + L+ K + N+ T+N + G
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM E L +N L+ + D + E + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T + ++ C++ A + M + ++P+ ++ L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + D M SK PN VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ N+ Y T++ K G+ AL +E I
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+ G P+ T+++++TGL ++ A ++ EK ++D
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAML----EKLQMSMD 682
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M+RK I+ + SF L+ F K + + G+ V +N +H L
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGL 159
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + +EA L +M +PN VT++ + G C++G EA M GL P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 322 SVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+V MCK GD +AL + E ++ +PN +++ L + S+A+ L
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 380 GLVKEK-FTKNVDTWNEIEAG 399
++EK ++ T+N + G
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVG 299
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 120/227 (52%), Gaps = 3/227 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY +I+ C++++ A +L EM + PN + L+ G+ + +++DV
Sbjct: 145 GVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDV 204
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+KV + M R G++ V M+ I LCK + +A + D M+ +G++PN VTY+ I
Sbjct: 205 SKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINC 264
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-- 353
CK+G+ EA M + G++P+ Y T++ + + + A+G +E I +
Sbjct: 265 LCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVE 324
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
P+ T S++ GL ++ +A + ++ E+ N+ T+N + G
Sbjct: 325 PDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGG 371
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 113/266 (42%), Gaps = 48/266 (18%)
Query: 180 DLDTYNRVIKAFCE-SSDSSSAYSILAEMDRKS---IKPNASSFGALVAGFYKEEKYEDV 235
D +YN V+ A C D A S+LA+M R++ +PNA S+ ++ G + ++
Sbjct: 75 DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M+ G+++ V Y I LC + A LL EM G+ PN + YS + G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194
Query: 296 FCKDGNFEEAKKFYR-----------------------------------IMSNSGLSPN 320
+C+ G +++ K + IM GL PN
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y ++ +CK G AL E KG P+ T +L+ GL+G V E +G
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSG---VLEMDGAMG 311
Query: 381 LVKEKFT------KNVDTWNEIEAGL 400
L++E +V T+N + GL
Sbjct: 312 LLEEMIQGDTLVEPDVVTFNSVIHGL 337
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 116/222 (52%), Gaps = 6/222 (2%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E G +L TYN +I F + A ++++E+ ++P++ ++ L+ GF K
Sbjct: 351 EMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKL 410
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVT 288
+ + L+ M + G+++ + Y + +LC+L +A L +EM ++ G+ ++V
Sbjct: 411 WEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVA 468
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
YS +YG CK G+ + AK+ + M + GL+P++ Y ++ K GD E A K+
Sbjct: 469 YSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMA 528
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
A G+VP+ SL+ G + +++ +++ L+ E KNV
Sbjct: 529 ASGFVPDVAVFDSLIKGYSAEGQIN---KILDLIHEMRAKNV 567
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 145/368 (39%), Gaps = 44/368 (11%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEE---LKTRPDLQNERFHAHSIILYGQANMTEH 128
H + + +S + + + +S+ EE L PD+ + G+
Sbjct: 182 HPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG---K 238
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV+ M + L +V +N L+ L +E + E G+ PD+ TYN +I
Sbjct: 239 AVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDK-GVAPDVVTYNTLI 297
Query: 189 KAFCESSDSSSAYSILAEMDRKS--IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ A +L EM + ++P+ +F +++ G K + V +MM G
Sbjct: 298 AGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERG 357
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN I ++ K A L+ E++S G++P+S TYS I GF K + A+
Sbjct: 358 CMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAE 417
Query: 307 KFYRIMSNSGLSP----------------------------------NSSVYFTMVYFMC 332
F R M+ G+ ++ Y TM+Y C
Sbjct: 418 MFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGAC 477
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVD 391
K GD + A ++ + +G P+ T L+ A + EA+ ++ + F +V
Sbjct: 478 KSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVA 537
Query: 392 TWNEIEAG 399
++ + G
Sbjct: 538 VFDSLIKG 545
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 38/288 (13%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ AV + M +R V + L+ L A + + E + G+ P++ Y+
Sbjct: 131 TDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGS-GVHPNVIVYS 189
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ +C S + EM R ++P+ F + K+ + KV +M +
Sbjct: 190 CLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQR 249
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI------------ 293
G++ V YNV I+ LCK EA AL +EM KG+ P+ VTY+ I
Sbjct: 250 GLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGA 309
Query: 294 -------------------------YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+G CK G +A +M+ G N Y ++
Sbjct: 310 MGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLI 369
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+ A+ E I+ G P+ T L+ G + +V A+
Sbjct: 370 GGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAE 417
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 143/305 (46%), Gaps = 7/305 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + I+KL A F L ++K + E + YG+A + A R +M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 137 -DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ + ++N +L L K V VF E + GI P + T+ V+KA C +
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM-LSKGISPTVYTFGVVMKALCLVN 249
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ SA ++L +M R PNA + L+ K + +V K+L+ M G V+ +N
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LCK+ + EA L+D ML +G PNS TY ++G C+ G +EA R++ N
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNK 365
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKES-IAKGWVPNFTTMKSLVTGLAGASKVSE 374
+PN ++ T++ G + A ES ++ G P+ T +L+ GL +
Sbjct: 366 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425
Query: 375 AKELI 379
A+EL+
Sbjct: 426 ARELM 430
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 139 HKLRHSVGA------FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
H+ SVG +N L+L L K Y R + + G +P++ TY +I FC
Sbjct: 395 HESMLSVGCGPDIFTYNTLILGLC-KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 453
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A ++L EM K + NA + L++ K+EK +D + M G K +
Sbjct: 454 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 513
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I LCK+ K EA L +ML +G+ N++TY+ I+ F + G +EA K M
Sbjct: 514 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G + Y ++ +C+ G+ E L ++ ++KG PN + L+ GL +
Sbjct: 574 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 633
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A E + ++ T ++ T+N + GL
Sbjct: 634 QHALEFLRDMIHRGLTPDIVTYNSLINGL 662
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I A C+ A ++ +M K KP+ +F +L+ G K K+E+ + Q M
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN IH+ + EA L+++ML +G + +TY+ I C+ GN E
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ + M + GL+PN+ ++ +C+ G+ + AL F ++ I +G P+ T SL+
Sbjct: 600 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 659
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL + EA L L E + T+N +
Sbjct: 660 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 693
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 158/377 (41%), Gaps = 20/377 (5%)
Query: 36 LTSKDKTRAALTLLKSESNPEKIL------------EICRAAALTPESHL------DRLA 77
L K A LL NP +L + A A+ ES L D
Sbjct: 350 LCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 409
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++ I L + Y + + E++ + N + I + + E A EM
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
L + +N L+ AL + ++ +F + + G KPD+ T+N +I C+ +
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPDIFTFNSLIFGLCKVNKF 528
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A + +M + + N ++ L+ F + ++ K++ M G YN
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 588
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I +LC+ + AL ++M+SKG+ PN+++ + I G C+ GN + A +F R M + GL
Sbjct: 589 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 648
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P+ Y +++ +CK G + AL + +G P+ T +L++ +A
Sbjct: 649 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 708
Query: 378 LIGL-VKEKFTKNVDTW 393
L+ V F N TW
Sbjct: 709 LLSRGVDSGFIPNEVTW 725
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 104 RPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+PD+ F +S+I + N E A+ +++M + + +N L+ A +
Sbjct: 509 KPDI----FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 564
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E ++ + G D TYN +IKA C + + ++ +M K + PN S L
Sbjct: 565 EALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 623
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G + + + L+ M G+ + YN I+ LCK + EA L D++ +G+
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
P+++TY+ I CK+G F++A +SG PN ++ +V K GD E
Sbjct: 684 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 154/328 (46%), Gaps = 3/328 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD ++SI I + + + S+ +E + + +E +A I + A+R
Sbjct: 255 LDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRL 314
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
EM + ++ +V +L+ + D R+F E + G+ P++ ++ +I+
Sbjct: 315 KDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEV-GVTPNVAIFSVLIEWCS 373
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A + M ++P L+ GF K+ E+ +L G+ S V+
Sbjct: 374 KIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVT 433
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ + LC+L K EA L D+M+ KG+ P+ V+Y+H I G CK G ++A + +
Sbjct: 434 -YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
SGL PN+ Y ++ K GD E A + +A G VP T S++ GL +V
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552
Query: 373 SEAKE-LIGLVKEKFTKNVDTWNEIEAG 399
SEA++ L +K+ F T+N I G
Sbjct: 553 SEARDKLNTFIKQSFIPTSMTYNCIIDG 580
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
EHA F +M + + FN+++ L E + F K I P TYN
Sbjct: 518 EHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFI-PTSMTYNC 576
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + + SA S+ EM R I PN ++ +L+ GF K K + K+ M+R G
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ +++Y I CK++ A ++L G+ PN++ Y+ I + N E A
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M N+ + + +Y +++ + K G AL E + +G VP+ L+ GL
Sbjct: 697 NLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGL 756
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
++ A +++ + T V +N + AG
Sbjct: 757 CNHGQLENAGKILKEMDGNNITPTVLLYNTLIAG 790
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P L +YN +I C+ A+ ++ + +KPNA ++ L+ G +K+ E
Sbjct: 461 GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHA 520
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ +N I+ LCK+ + +EA+ L+ + + P S+TY+ I G
Sbjct: 521 FNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDG 580
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K+G + A+ YR M S +SPN Y +++ CK + AL + KG +
Sbjct: 581 YVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELD 640
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
T +L+ G + A + L++ T N +N
Sbjct: 641 ITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYN 680
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P++ TY +I FC+S+ A + +M RK ++ + + + L+AGF K + E+
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENAC 661
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSL----------------------CKLR--------- 265
K + G+ +YN+ I + C L+
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721
Query: 266 ----KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
K + A L EML +G+ P+ Y+ I G C G E A K + M + ++P
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+Y T++ K G+ + A E + KG VP+ TT LV G
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN V+ CE + A ++ +M K I P+ S+ ++ G K+ +D ++V+ +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+K Y + + K C A + D+M++ G+ P T++ I G CK G
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EA+ P S Y ++ K G ++A +E PN T SL
Sbjct: 553 SEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSL 612
Query: 363 VTGLAGASKVSEAKEL 378
+ G ++K+ A ++
Sbjct: 613 INGFCKSNKMDLALKM 628
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 117/311 (37%), Gaps = 36/311 (11%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
NM E A R F EM E ++ L+ A + E +R F + G+K D +
Sbjct: 201 NMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQ-AAGRGLKLDAAS 259
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y+ VI+A C SD A ++ + P+ ++ A++ + + + ++ M
Sbjct: 260 YSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMV 319
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ V++ I C A L DE++ G+ PN +S I K GN E
Sbjct: 320 DSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVE 379
Query: 304 EAKKFYRIMSNSGLSPNSSV----------------------------------YFTMVY 329
+A + Y M GL P + Y ++
Sbjct: 380 KANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLL 439
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTK 388
++C+ G A + I KG P+ + ++ G + +A E++ G+++
Sbjct: 440 WLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKP 499
Query: 389 NVDTWNEIEAG 399
N T+ + G
Sbjct: 500 NAITYTILMEG 510
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 1/232 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN LL++ A E F + G+ P + N ++ A + A+ + E
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLED-GVVPWVPFVNVLLTAMIRRNMVEDAHRLFDE 212
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + I + + L+ K K+ + + G+K + Y++ I ++C+
Sbjct: 213 MAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSD 272
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A L++ G P+ TY+ I + GNF EA + M +S + N +V +
Sbjct: 273 LDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATS 332
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++ C GD +AL E + G PN L+ + V +A EL
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANEL 384
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 162 KEVKRVFIEFPKTYGIK-PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
K + + +E + YG K D +N ++ ++ ++ + A M + P
Sbjct: 132 KVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVN 191
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ + ED +++ M + V + + K K EA+ + +
Sbjct: 192 VLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGR 251
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+K ++ +YS I C+ + + A K G P+ Y ++ + G++ A
Sbjct: 252 GLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEA 311
Query: 341 LGFCKESIAKGWVP-NFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
L K+ + VP N SL+ G V+ A L +V+ T NV
Sbjct: 312 LRL-KDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNV 362
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM + ++ +N+L+ L ++K V + E + I PD+ T N V+
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTVV 287
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C+ + A+ ++ M + ++PN ++ AL+ G + + KV M
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ V YN I+ CK++ +A L +EM + + PN+VTY+ I+G C G ++A
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G P+ Y T+ ++CK + A+ K W P+ +++ G+
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A ++ +A++L L + NV T+N + GL
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 500
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ TF M + S FN LL ++ K + + + + ++GI PD+ T
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM-DSFGIPPDVYT 107
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
VI + C + A+S LA++ + +P+A++F L+ G E K + + M
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V Y I+ LCK+ + A LL M +PN V +S I CKD
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA + M G+SPN Y ++++ +CK +++ E + +P+ T+ ++V
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
L V+EA +++ ++ NV T+N + G
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++G + E H EM + K+ V N ++ AL E V ++
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV-VDMMIHR 309
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ TYN ++ C ++ A + M K N S+ L+ G+ K + +
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R + YN IH LC + + +A +L EM+++G P+ VTY
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ + ++A + + S P+ +Y T++ MC+ G+ E A +KG PN
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T ++ GL ++EA +L + K + N T+N I G
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 4/264 (1%)
Query: 140 KLRHSVGA--FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
KL H A F L+ L + E +F + G +P++ TY +I C+ ++
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNT 191
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
S+A +L M++ + +PN F L+ K+ + + + M G+ + YN
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
IH LCKL + L++EM+ + P+ T + + CK+G EA +M + G+
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN Y ++ C + + A+ + K V N + +L+ G V +A
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 378 LI-GLVKEKFTKNVDTWNEIEAGL 400
L + +++ T N T+N + GL
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGL 395
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 156/367 (42%), Gaps = 45/367 (12%)
Query: 74 DRLAFSIAINKLSEANY----FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
D +I IN L N F+ +++ L+ L +PD + + G+ A
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILK-LGHQPDATTFTTLIRGLCVEGKIG---EA 159
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ F +M + +V + L+ L + R+ + +P++ ++ +I
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG-NCQPNVVVFSTLID 218
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ C+ + A++I +EM K I PN ++ +L+ G K +++ V ++ M +
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT--------------------- 288
V N + +LCK AEA ++D M+ +G++PN VT
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 289 --------------YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
Y+ I G+CK + ++A + MS L+PN+ Y T+++ +C
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTW 393
G + A+ E +A+G +P+ T ++L L + +A L+ ++ + ++ +
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 394 NEIEAGL 400
I G+
Sbjct: 459 TTILDGM 465
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + AV+ F M +V ++N L+ + + +F E + + P+ T
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE-LTPNTVT 387
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I C A S+ EM + P+ ++ L K + +L+ +E
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ +Y + +C+ + +A+ L + SKG++PN TY+ I+G CK G
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA K + M+ +G SPN Y + + + + +E +A+G+ + +T LV
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Query: 364 TGLAGASKVSEAKELI 379
L+ K+++
Sbjct: 568 GMLSDDGLDQSVKQIL 583
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM + ++ +N+L+ L ++K V + E + I PD+ T N V+
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTVV 287
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C+ + A+ ++ M + ++PN ++ AL+ G + + KV M
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ V YN I+ CK++ +A L +EM + + PN+VTY+ I+G C G ++A
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G P+ Y T+ ++CK + A+ K W P+ +++ G+
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A ++ +A++L L + NV T+N + GL
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 500
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ TF M + S FN LL ++ K + + + + ++GI PD+ T
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM-DSFGIPPDVYT 107
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
VI + C + A+S LA++ + +P+A++F L+ G E K + + M
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V Y I+ LCK+ + A LL M +PN V +S I CKD
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA + M G+SPN Y ++++ +CK +++ E + +P+ T+ ++V
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
L V+EA +++ ++ NV T+N + G
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++G + E H EM + K+ V N ++ AL E V ++
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV-VDMMIHR 309
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ TYN ++ C ++ A + M K N S+ L+ G+ K + +
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R + YN IH LC + + +A +L EM+++G P+ VTY
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ + ++A + + S P+ +Y T++ MC+ G+ E A +KG PN
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T ++ GL ++EA +L + K + N T+N I G
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 4/264 (1%)
Query: 140 KLRHSVGA--FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
KL H A F L+ L + E +F + G +P++ TY +I C+ ++
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNT 191
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
S+A +L M++ + +PN F L+ K+ + + + M G+ + YN
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
IH LCKL + L++EM+ + P+ T + + CK+G EA +M + G+
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN Y ++ C + + A+ + K V N + +L+ G V +A
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 378 LI-GLVKEKFTKNVDTWNEIEAGL 400
L + +++ T N T+N + GL
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGL 395
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 156/367 (42%), Gaps = 45/367 (12%)
Query: 74 DRLAFSIAINKLSEANY----FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
D +I IN L N F+ +++ L+ L +PD + + G+ A
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILK-LGHQPDATTFTTLIRGLCVEGKIG---EA 159
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ F +M + +V + L+ L + R+ + +P++ ++ +I
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG-NCQPNVVVFSTLID 218
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ C+ + A++I +EM K I PN ++ +L+ G K +++ V ++ M +
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT--------------------- 288
V N + +LCK AEA ++D M+ +G++PN VT
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 289 --------------YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
Y+ I G+CK + ++A + MS L+PN+ Y T+++ +C
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTW 393
G + A+ E +A+G +P+ T ++L L + +A L+ ++ + ++ +
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 394 NEIEAGL 400
I G+
Sbjct: 459 TTILDGM 465
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + AV+ F M +V ++N L+ + + +F E + + P+ T
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE-LTPNTVT 387
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I C A S+ EM + P+ ++ L K + +L+ +E
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ +Y + +C+ + +A+ L + SKG++PN TY+ I+G CK G
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA K + M+ +G SPN Y + + + + +E +A+G+ + +T LV
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNV 390
L+ K+++ + + +N+
Sbjct: 568 GMLSDDGLDQSVKQILCKIVILYERNL 594
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y++M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ ++M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K + ++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E + +V ++A++ +L + + + +F E + GI PDL TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I P+ ++ AL+ F KE K+ + ++ M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ Y+ I CK + A+ + M +KG PN +T++ I G+C ++
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M+ +GL +++ Y T+++ GD AL +E I+ G P+ T +L+
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVD 391
GL K+ +A E+ V +K K++D
Sbjct: 474 GLCDNGKLKDALEMFK-VMQKSKKDLD 499
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV F L+ + + V ++ + + I+ D+ ++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDIYSFTI 119
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G E++ + + M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P +TY + G CK G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + A E KG P+ T S++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S+A++L+ +++ K + +V T+N +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 3/273 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ TF ++ + L V FN LL L + E +F + +T +P++ T+ ++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLM 191
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE-EKYEDVNKVLQMMERYGM 247
C A ++L M ++P ++G +V G K+ + +N + +M E +
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V +Y+ I SLCK + ++A+ L EM KG+ P+ TY+ I GFC G + +A++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M +SP+ Y ++ K G + A E + +G +PN T S++ G
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 368 GASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+++ A+ + L+ K + N+ T+N + G
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM E L +N L+ + D + E + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T + ++ C++ A + M + ++P+ ++ L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + D M SK PN VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ N+ Y T++ K G+ AL +E I
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+ G P+ T+++++TGL ++ A ++ EK ++D
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAML----EKLQMSMD 682
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M+RK I+ + SF L+ F K + + G+ V +N +H L
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGL 159
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + +EA L +M +PN VT++ + G C++G EA M GL P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 322 SVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+V MCK GD +AL + E ++ +PN +++ L + S+A+ L
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 380 GLVKEK-FTKNVDTWNEIEAG 399
++EK ++ T+N + G
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVG 299
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E + +V ++A++ +L + + + +F E + GI PDL TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I P+ ++ AL+ F KE K+ + ++ M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ Y+ I CK + A+ + M +KG PN +T++ I G+C ++
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M+ +GL +++ Y T+++ GD AL +E I+ G P+ T +L+
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVD 391
GL K+ +A E+ V +K K++D
Sbjct: 474 GLCDNGKLKDALEMFK-VMQKSKKDLD 499
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV F L+ + + V ++ + + I+ D+ ++N
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDIYSFNI 119
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G E++ + + M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P +TY + G CK G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + A E KG P+ T S++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S+A++L+ +++ K + +V T+N +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 3/273 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ TF ++ + L V F LL L + E +F + +T +P++ T+ ++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLM 191
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE-EKYEDVNKVLQMMERYGM 247
C A ++L M ++P ++G +V G K+ + +N + +M E +
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V +Y+ I SLCK + ++A+ L EM KG+ P+ TY+ I GFC G + +A++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M +SP+ Y ++ K G + A E + +G +PN T S++ G
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 368 GASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+++ A+ + L+ K + N+ T+N + G
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM E L +N L+ + D + E + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T + ++ C++ A + M + ++P+ ++ L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + D M SK PN VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ N+ Y T++ K G+ AL +E I
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+ G P+ T+++++TGL ++ A ++ EK ++D
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAML----EKLQMSMD 682
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M+RK I+ + SF L+ F K + + G+ V + +H L
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + +EA L +M +PN VT++ + G C++G EA M GL P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 322 SVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+V MCK GD +AL + E ++ +PN +++ L + S+A+ L
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 380 GLVKEK-FTKNVDTWNEIEAG 399
++EK ++ T+N + G
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVG 299
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N ++ A+ D + + + P + G KP+ YN V+K FC A IL EM
Sbjct: 236 YNVIIDAMCREGDVDQARELLNSLP-SRGCKPNTVNYNTVLKGFCSIERWVDADEILDEM 294
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
R++ PN ++ ++ ++ + V L+ M ++G + V YN I +C+
Sbjct: 295 VRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNV 354
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A LL M S G KP+ VTY+ + G C +E+A++ MS + P++S + T+
Sbjct: 355 DSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTI 414
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ F C+ G A K+ KG PN TT +++ GL A K+ +A EL+
Sbjct: 415 ISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELL 466
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ NR+++ C + A ++ ++ A+++GALV G+ + ED +V
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVVEACGPEA---TAATYGALVDGYCRAGLLEDARRV 150
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + S +N IH+LC+ + A+A +LD ML +G P+ VTY+ + CK
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ +A + M G PN+ Y ++ MC+ GD + A ++G PN
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+++ G + +A E++ +V+E N T N I
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + E A R M H S A N L+ AL + V ++ G P
Sbjct: 138 YCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADAL-VVLDGMLCRGCAP 196
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +++A C+ A ++ M + +PN ++ ++ +E + ++L
Sbjct: 197 DVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELL 256
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G K YN + C + + +A +LDEM+ + PN T + I C+
Sbjct: 257 NSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRK 316
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++ + MS G + N Y ++ MC+ G+ ++AL + G P+ T
Sbjct: 317 GLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTY 376
Query: 360 KSLVTGLAGASKVSEAKELI 379
+++ GL A + +A+EL+
Sbjct: 377 NTVLKGLCSADRWEDAEELM 396
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+++E +G ++ TYN VI CE + SA +L+ M KP+ ++ ++ G
Sbjct: 324 LYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGL 383
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+++ED +++ M + S +N I C+ +A + +M KG PNS
Sbjct: 384 CSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNS 443
Query: 287 VTYSHFIYGFCKDGNFEEA--------------KKFYRIMS------------------- 313
TYS I G K G E+A K YR+++
Sbjct: 444 TTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKL 503
Query: 314 -NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+SG+SP + +Y T++ +C+ G + A+ + ++ G +P+ +T L+ GL
Sbjct: 504 QDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYS 563
Query: 373 SEAKELI 379
EA+EL+
Sbjct: 564 KEARELL 570
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 110/276 (39%), Gaps = 36/276 (13%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++ IN L ++ YLE++ N + I + + A+ M
Sbjct: 306 LNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + +N +L L A +++ + + I+ + + PD T+N +I +C+
Sbjct: 366 SFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL-PDNSTFNTIISFWCQKGLI 424
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYK----------------------------- 228
A+ + +M K PN++++ ++ G K
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLT 484
Query: 229 -----EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
E+K E+V +V+ ++ G+ +YN + LC+ K A +L +M+S G
Sbjct: 485 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCM 544
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLS 318
P+ TY I G +G +EA++ R+ S LS
Sbjct: 545 PDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLS 580
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD TYN ++ +C S A L +M ++PN ++ +L+ K + +
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M + G++ ++ Y + CK + E++ L D M+ G+KP+ +TY+ I G
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G +EA K M + G+ P+ Y T++ C+ + AL KE ++ G PN
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T ++ GL + + AKEL + + K + T+N I GL
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 464
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F LL L K + + + G PD+ +YN ++K C+ + S A +L M
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189
Query: 208 --DR-KSIKPNASSFGALVAGFYKE--------EKYEDVNKVLQMMERYGMKSGVSMYNV 256
DR P+ S+ ++ GF+KE + + +VL M + G+ YN
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNS 249
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+H C + EA L +M S G++PN VTYS + CK+G EA+K + M+ G
Sbjct: 250 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L P+ + Y T++ CK G + + G P+ T +L+ G A K+ EA
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369
Query: 377 ELI 379
+L+
Sbjct: 370 KLL 372
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 9/234 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSS--------AYSILAEMDRKSIKPNASSFGALVAGFY 227
G PD+ +YN V+ F + + A +L M + + P+ ++ +++ G+
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ ++ L+ M G++ V Y+ ++ LCK + EA+ + D M +G++P+
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY + G CK+G E++K + +M G+ P+ Y T++ C G + A
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
++ G P+ T +L+ G S++ +A L +V + N+ T+N I GL
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A + F M + L + + LL E +++F + G+KPD+ TYN
Sbjct: 295 STEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF-DLMVRIGVKPDIITYN 353
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A +LA M +KP+ ++G L+ G+ + + +D + + M
Sbjct: 354 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 413
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ + YN+ + L R+ A AK L + G + TY+ ++G CK+ +EA
Sbjct: 414 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 473
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ ++ + + L + + M+ + K G + A A G VP+ T +
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533
Query: 366 LAGASKVSEAKEL 378
L + E +L
Sbjct: 534 LIEQGSLEELDDL 546
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +++ + +++A + + + + S++ ++ G K ++
Sbjct: 414 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 473
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ Q + ++ +N+ I +L K + EAK L + G+ P+ TYS
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ G+ EE + M +G S +S + ++V + + GD A
Sbjct: 534 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 144/309 (46%), Gaps = 5/309 (1%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAV 130
LD + ++ I+ + ++Q L ++ R ++ + + + +I L + + E A
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VRENVDPDDYTFNILIDALCKEGRILE-AQ 285
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M + + + +NAL+ ++ E + +F K G++PD+ YN +I
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR-GLEPDVLNYNVLIDG 344
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ A + E+ K++ P +S+ +L+ G + V K+L M
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN+ I +LCK + EA +L M+ KG+KPN VTY+ + G+C N AK +
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M SGL P+ Y ++ CK + A+ KE K +P+ + SL+ GL
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Query: 371 KVSEAKELI 379
++ +EL+
Sbjct: 525 RIPHVQELL 533
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 3/275 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M + A+ FKE+ L ++ ++N+L+ L + VK++ E + P
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS-AQPP 403
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I A C+ A +L M +K +KPN ++ A++ G+ +
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M + G++ + YNV I+ CK EA L EM K + P+ +Y+ I G C
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++ M +SG SP+ Y ++ CK ++ A+ ++ + W P+F T
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTN 582
Query: 360 KSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTW 393
++V L K+ A++ L L+ + NV T+
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 149/345 (43%), Gaps = 5/345 (1%)
Query: 57 KILEICRAAALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
K L+ C+ L + +L D+ + IN LS+ L+E++ N ++
Sbjct: 143 KALDFCQN--LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I + A+ ++ E + +N+L+ ++EV ++ + +
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE- 259
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ PD T+N +I A C+ A +LA M ++ KP+ ++ AL+ G+ E +
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G++ V YNV I CK + EA L E+ +K + P +Y+ I G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G KK M S P+ Y ++ +CK G ALG + KG PN
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +++ G + V+ AK++ +VK ++ +N + G
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 2/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
H + EM V +N L+ AL E V + K G+KP++ TYN +
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAM 446
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ +C ++ + A I M + ++P+ ++ L+ G+ K E ++ + + M +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
++ YN I LC L + + LLDEM G P+ +TY+ + FCK F++A
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+R + G+ P+ +V +CKG + A K + G PN T L+ L
Sbjct: 567 LFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 368 GASKVSEAKELI 379
EA L+
Sbjct: 626 KDGSFGEAMLLL 637
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 37/310 (11%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F M F+ LL A+ Y +F + ++ GI P + T+
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQL-QSKGISPSIATFT 94
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF-------------------------- 219
+I + S ++ A+S+LA + + +PN +F
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 220 ---------GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
G L+ G K + + +LQ ME+ ++ + MY+ I LCK ++A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
L ++ +G+ ++VTY+ I G C G ++E + M + P+ + ++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKN 389
+CK G A G +G P+ T +L+ G V EA+EL +VK +
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 390 VDTWNEIEAG 399
V +N + G
Sbjct: 335 VLNYNVLIDG 344
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 35/259 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ M + ++ ++ +NA++ + + K +F K+ G++PD+ YN +I
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS-GLEPDILNYNVLI 482
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ A + EM K++ P+ +S+ +L+ G + V ++L M G
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542
Query: 249 SGVSMYNVRIHSLCK----------LRKCAE------------------------AKALL 274
V YN+ + + CK R+ E A+ L
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDAL 602
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+L G PN TY+ I CKDG+F EA M ++ P++ + ++ + +
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662
Query: 335 GDYETALGFCKESIAKGWV 353
+ + A +E IA+G V
Sbjct: 663 NETDKAEKLREEMIARGLV 681
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 36/239 (15%)
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A + M R P S F L+ + Y + ++ G+ +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC-------------- 297
+ + + I+ A A +LL +L G +PN VT++ I GFC
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 298 ---------------------KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
K+G + A + M S + PN +Y ++ +CK G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
ALG C + +G + + T SL+ G + E +L+ +V+E + T+N
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEENLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E I KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 FTYTTLIDG 320
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM K + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM+ KG+KP+ TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWXGSKLL 404
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N + M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ M GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTW 393
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVW 398
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWXGSKLLKEMQRDGYKPS 415
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 84/210 (40%), Gaps = 1/210 (0%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ + +
Sbjct: 20 IHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYLE 78
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + + + L KL+ +E L G +
Sbjct: 79 SGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYF 138
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ F K+G A+ + ++ GL P+ + T++ K GD
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A L
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVL 228
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN +I C++ A +L EM+ PN+ + L+ G K+ + ++
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ M++ G + V +Y I C K L DEML KG+ N VTYS ++G
Sbjct: 89 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ G ++EA M+ G+ P+ Y ++ +CK G A+ + KG P+
Sbjct: 149 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 208
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T L++GL V +A +++ ++ EK K +V T+N + GL
Sbjct: 209 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +EM + + ++N L+ L AK KE + +E + G P+ T ++
Sbjct: 17 AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLM 75
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A +L M +K + +G L++GF + ++ M G+
Sbjct: 76 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 135
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ V Y+ +H LC+L + EA +L+ M G+ P+ VTY+ I G CKDG A
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+M G P++ Y ++ +CK G A + I KG + T +L+ GL
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255
Query: 369 ASKVSEAKELIGLVKEK---FTKNVDTWNEIEAGL 400
KV EA +L + + NV T+N + GL
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 290
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N V+K C + A ++ EM RKS+ P+ S+ L+ G K +K ++ +L ME
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G + LCK + EA LL+ M KG + V Y I GFC +GN +
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
K+ + M G+S N Y +V+ +C+ G ++ A G P+ T L+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 365 GLAGASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
GL + + A +L+ L+ EK + NV T+N + +GL
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNV-TYNVLLSGL 218
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-F 171
++++L G + + A + + M E + V +N L+ L E ++F F
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++P++ T+N +I C+ + A I +M +K N ++ L+ G K K
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ ++ + + G Y++ I CK+R AK L EM + G+ P Y+
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ CK+G+ E+AK ++ M N+ P+ + TM+ K GD++ + + G
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
P+ T +L+ L+ ++ EAK L +V FT + ++ + GL
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 126 TEHAVRTFKEM--DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLD 182
+ A++ F M +E+ L +V FN L+ L K+ + K V I G +L
Sbjct: 259 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGL--CKEGRLTKAVKIHRKMVKKGSCGNLV 316
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN ++ ++ A + ++ PN+ ++ L+ GF K + M
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+G+ + YN + SLCK +AK+L EM + +P+ ++++ I G K G+F
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ K+ M GL P++ + T++ + K G+ + A + +A G+ P+ SL
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496
Query: 363 VTGLAGASKVSEAKELI 379
+ GL+ +E L+
Sbjct: 497 LKGLSSKGDTTEIINLL 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV+ ++M + ++ +N LL A KE ++ + G P+ TY+ +I
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD-LGFVPNSFTYSILI 357
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+ + A + EM + P + L+A KE E + Q M +
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +N I K K L +M+ G++P+++T+S I K G +EAK
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M SG +P++ VY +++ + GD + + AKG V + + +++T L
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537
Query: 369 ASKVSEAKELI 379
+ + + EL+
Sbjct: 538 SIQEVDVMELL 548
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD--LDTY 184
E A+ + ++ E +R S+ A N++L A + + + E K G D +T
Sbjct: 173 EEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKA-GTASDANTETV 231
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I+AFC+S + Y +L + + + P ++ L+AGF + + Y +++VL M
Sbjct: 232 GCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIA 291
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ Y I+ LCK +C EA + +++ +G P+ V Y+ I+G C+ G+F E
Sbjct: 292 RNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGE 351
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A+K + M + G+ PN+ Y TM++ K GD+E A E KG+ T +++
Sbjct: 352 ARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIIS 411
Query: 365 GLAGASKVSEAKEL 378
L K EA E+
Sbjct: 412 ELCSRGKSDEAFEV 425
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++ A FK+M E ++ +N+L+ E + E +P + Y
Sbjct: 419 SDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELV-AQDPQPSVSLYE 477
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+ D +A +L +M K + PNA ++ ++ G K +E V ++
Sbjct: 478 LLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNK 537
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + + N I LC K EA + +M G+K +++TY+ I GFCK+G ++
Sbjct: 538 GYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKS 597
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ GL P++S Y +++ +C+ GD E+A + ++KG P+ + L++G
Sbjct: 598 MNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISG 657
Query: 366 LAGASKVSEAKE-LIGLVKEKF 386
L + +E + L+G+++ K
Sbjct: 658 LCKQGRATEGMDRLMGMLENKI 679
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+F KT G+ P TYN++I FC++ + +S +L M ++ P ++ ++ G K
Sbjct: 253 QFLKT-GLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKN 311
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
E+ + +V ++ G MY IH LC++ EA+ L EM+ KGM+PN+ TY
Sbjct: 312 EECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTY 371
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ ++G K G+FE A + Y M N G + ++ +C G + A K+
Sbjct: 372 NTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSE 431
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G + T SL+ G KV E L+
Sbjct: 432 TGIQADAITYNSLIRGFCKEGKVDERMNLL 461
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 139/322 (43%), Gaps = 6/322 (1%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEH 139
I +A + +S+ L + R L + + I+ G E A R F ++ +
Sbjct: 270 IAGFCQAKNYASMSEVLHTMIARNHLPT--IYTYQEIINGLCKNEECLEAYRVFNDLKDR 327
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+ ++ L + E ++++ E G++P+ TYN ++ +S D
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDK-GMQPNAYTYNTMLHGSLKSGDFER 386
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A + EM K + +++ K ++ +V + M G+++ YN I
Sbjct: 387 ACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIR 446
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
CK K E LL+E++++ +P+ Y I CKDG+FE AK+ MS+ GL P
Sbjct: 447 GFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHP 506
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N+ Y TM++ K GD+E E+ KG+ T +++ L K EA E+
Sbjct: 507 NAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMF 566
Query: 380 GLVKEKFTK-NVDTWNEIEAGL 400
+ E K + T+N + G
Sbjct: 567 KKMSETGIKADAITYNSLIRGF 588
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 140/327 (42%), Gaps = 44/327 (13%)
Query: 96 QYLEELKTRPDLQNERFHA----HSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFN 149
+ LE + DL++ + ++ +++G M A + + EM + ++ + +N
Sbjct: 313 ECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYN 372
Query: 150 ALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
+L + D++ ++ E K YG T N++I C S A+ + +M
Sbjct: 373 TMLHGSLKSGDFERACELYNEMCNKGYGTTTV--TCNKIISELCSRGKSDEAFEVFKKMS 430
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
I+ +A ++ +L+ GF KE K ++ +L + + VS+Y + I CK
Sbjct: 431 ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFE 490
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE------------------------- 303
AK LL +M SKG+ PN+ TY ++G K G+FE
Sbjct: 491 AAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKII 550
Query: 304 ----------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
EA + ++ MS +G+ ++ Y +++ CK G ++ E +A+G
Sbjct: 551 SELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQ 610
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIG 380
P+ ++ SL+ L AK L G
Sbjct: 611 PSASSYASLIIQLCQNGDAESAKRLWG 637
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYN 185
E A R +M L + ++ +L + D++ V+ ++ E K YG T N
Sbjct: 490 EAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTA--TCN 547
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++I C S A + +M IK +A ++ +L+ GF KE K +L +
Sbjct: 548 KIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQ 607
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ S Y I LC+ AK L +M+SKG++P++ H I G CK G E
Sbjct: 608 GLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEG 667
Query: 306 KKFYRIMSNSGLSPNSSVY 324
M + + P + +
Sbjct: 668 MDRLMGMLENKIKPKKAAF 686
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 15/256 (5%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+F D R V N +LL+L R F + PD + N + +A
Sbjct: 85 SFNFADPLFFRELVATQNNVLLSL----------RFFQWLCTNHDCTPDPISSNMLFEAL 134
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
++ +A + D P+++S V E+ +V ++ G++ +
Sbjct: 135 LDAKAVRAAKMV---RDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISI 191
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGM--KPNSVTYSHFIYGFCKDGNFEEAKKFY 309
N + K K EM+ G N+ T I FC G +
Sbjct: 192 VACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELL 251
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+GL P + Y ++ C+ +Y + IA+ +P T + ++ GL
Sbjct: 252 NQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKN 311
Query: 370 SKVSEAKELIGLVKEK 385
+ EA + +K++
Sbjct: 312 EECLEAYRVFNDLKDR 327
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ KEM+ + ++H+ ++ L+ D+ +F E K+ G
Sbjct: 451 INLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKS-G 509
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD YN +I+AFC+ + A IL +M ++ ++P+ +F ++ GF +
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 569
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L +M R G V YN IH L K + A ++L++M G+ PN TY+ + G+
Sbjct: 570 NILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 629
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+G+ +A +++ + GL + +Y T++ CK G ++AL +E + N
Sbjct: 630 AANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNT 689
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
L+ G A V EA +L+ +KE
Sbjct: 690 FVYNILIDGWARRGDVWEAADLMKQMKE 717
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I ++ N +E K + N +++ I + Q+ + A +E
Sbjct: 340 VTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVRE 399
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + A+++++ TI +D K+ VF E K P + +Y +I + +
Sbjct: 400 MEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVF-ERLKECCFTPSIISYGCLINLYIKIG 458
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A +I EM+ IK N ++ L++GF + + + + M + G++ ++YN
Sbjct: 459 KVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYN 518
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I + CK+ A +L++M + M+P++ + I GF G+ + A +M S
Sbjct: 519 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRS 578
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G +P Y +++ + K E A+ + G PN T ++ G A + +A
Sbjct: 579 GCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKA 638
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 639 FEYFTKIKE 647
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 39/330 (11%)
Query: 89 NYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGA 147
++ N S + E LK+ LQ +R + +I + + + A+R ++M + +++ S A
Sbjct: 494 DFANAFSIFEEMLKS--GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRA 551
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F ++ +A D K + ++ + G P + TYN +I + + A S+L +M
Sbjct: 552 FRPIIEGFAVAGDMKRALNI-LDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKM 610
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK---- 263
I PN ++ ++ G+ + ++ G+K V +Y + + CK
Sbjct: 611 SIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRM 670
Query: 264 -----------LRKCA--------------------EAKALLDEMLSKGMKPNSVTYSHF 292
+K A EA L+ +M G+ PN TY+ +
Sbjct: 671 QSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSY 730
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK G+ + A+K M++ GL PN Y T++ K + AL +E G
Sbjct: 731 INACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGL 790
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
P+ LVT L + V E G++
Sbjct: 791 KPDEAAYHCLVTSLLSRATVMEGSTYTGIL 820
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 37/320 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ Y + HA TF+ M + + F +L+ A +A+D + V +E K G
Sbjct: 276 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSC-VEEMKAEG 334
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ + TY+ +I F + +D+ SA ++ E K N + ++ + +
Sbjct: 335 IELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAE 394
Query: 237 KVLQMMERYGMKSGVSMYNVRIHS-------------------LC--------------- 262
++++ ME G+ + + Y+ +H C
Sbjct: 395 ELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLY 454
Query: 263 -KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
K+ K +A A+ EM S G+K N+ TYS I GF +F A + M SGL P+
Sbjct: 455 IKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDR 514
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++Y ++ CK G+ + A+ ++ + P+ + ++ G A A + A ++ L
Sbjct: 515 AIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDL 574
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
++ V T+N + GL
Sbjct: 575 MRRSGCAPTVMTYNALIHGL 594
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+D++ V F PK P + +I + + D A + M + I+PNA
Sbjct: 252 EDWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFV 306
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F +LV + V ++ M+ G++ + Y++ I K+ A L E
Sbjct: 307 FTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAK 366
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
+K N + YS+ I+ C+ GN + A++ R M G+ Y +M++
Sbjct: 367 AKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMH 417
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 96/258 (37%), Gaps = 9/258 (3%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
IL++ R + P + ++ I+ L + N L ++ NE H ++I
Sbjct: 571 ILDLMRRSGCAPTV----MTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNE--HTYTI 624
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I+ G A + A F ++ E L+ V + LL A + + V E T
Sbjct: 625 IMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM-STQ 683
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
I + YN +I + D A ++ +M + PN ++ + + K +
Sbjct: 684 KIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRA 743
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KV++ M G+K + Y I K A +EM G+KP+ Y +
Sbjct: 744 QKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTS 803
Query: 296 FCKDGNFEEAKKFYRIMS 313
E + I+S
Sbjct: 804 LLSRATVMEGSTYTGILS 821
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNK 237
PD+ +YN ++K C+S S Y+ + EM K +KPN ++ L+ + + +
Sbjct: 196 PDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATR 255
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ ++E G K +YN + C L + +EA + + M KG++P+ +TY+ I+G
Sbjct: 256 LVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLS 315
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G EAKK R+M+ G P+ Y +++ MC+ G+ AL +E KG PN
Sbjct: 316 KSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTC 375
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVK 383
T +L+ GL + +A EL G +K
Sbjct: 376 TYNTLLHGLCKSRMFDKAMELYGAMK 401
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 1/279 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A+ + AV KE+ + ++N L+ L ++ V E + +KP+L
Sbjct: 176 ADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLV 235
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I C + + A ++ ++ + KP+ + ++ G+ + + +V M
Sbjct: 236 TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 295
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G++ + YN I L K + +EAK LL M KG P+ VTY+ + G C+ G
Sbjct: 296 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGET 355
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
A M G SPN+ Y T+++ +CK ++ A+ + G + + +
Sbjct: 356 LAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATF 415
Query: 363 VTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
V L +V++A E+ V+ K +V ++ +E+ L
Sbjct: 416 VRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTL 454
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 109/271 (40%), Gaps = 43/271 (15%)
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR--KSIKPN 215
+ + +E K +F F + D +N +++++ S + + + L M + S P+
Sbjct: 63 SPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSFSPD 122
Query: 216 ASSFGALVAGFYK--EEKYED---VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
S++ L+ K + KY +++ L +M G+ ++ + SLC + +A
Sbjct: 123 KSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVDDA 182
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKD------------------------------- 299
L+ E+ SK P+ +Y+ + CK
Sbjct: 183 VELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILID 242
Query: 300 -----GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
N EA + I+ G P+ +Y T++ C A+ KG P
Sbjct: 243 NVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEP 302
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ T +L+ GL+ + +VSEAK+L+ ++ EK
Sbjct: 303 DLITYNTLIFGLSKSGRVSEAKKLLRVMAEK 333
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A + F EM E + ++ +N L+ L E +V + K+Y I P+L TYN
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSYVINPNLITYN 342
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A S+ ++ + + P+ ++ LV+GF ++ K+++ ME
Sbjct: 343 TLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEER 402
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K Y + I + + A L M G+ P+ TYS I+GFC G EA
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ ++ M L PN +Y TM+ CK G AL ++ K PN + L+
Sbjct: 463 SRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRV 522
Query: 366 LAGASKVSEAKELI 379
L K+ EA++L+
Sbjct: 523 LCKERKLKEAEDLV 536
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 135/313 (43%), Gaps = 1/313 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD +F I I EA L EL+ N + I + E A
Sbjct: 161 LDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + L + + L+ L K+ E + +G+ P+L TYN V+ C
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGL-FKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLC 279
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A+ + EM + + N ++ L+ G +E K + NKV+ M+ Y + +
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C + K +A +L ++ S+G+ P+ VTY+ + GFC+ G+ A K + M
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ P+ Y ++ + + ETA+ G VP+ T L+ G ++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 373 SEAKELIGLVKEK 385
+EA L + EK
Sbjct: 460 NEASRLFKSMVEK 472
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K+ G+ P L TYN ++ FC D+S A ++ EM+ + IKP+ ++ L+ F + +
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E ++ ME G+ V Y+V IH C + EA L M+ K ++PN V Y+
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+CK+G+ A + +R M L+PN + Y ++ +CK + A ++ I G
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544
Query: 353 VPNFT 357
P+ T
Sbjct: 545 DPSDT 549
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G P++ Y +I C+ + A + EM + + N ++ L+ G +K
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK 249
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ ++ + M+ +G+ + YN ++ LCK + +A + DEM +G+ N VTY+
Sbjct: 250 KQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL 309
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C++ EA K M + ++PN Y T++ C G AL C++ ++G
Sbjct: 310 IGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGL 369
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
P+ T LV+G S A +++ ++E+ K
Sbjct: 370 SPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 57 KILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
K L +CR + L+P + +++ ++ +G ++ ++E++ R ++ +
Sbjct: 356 KALSLCRDLKSRGLSP----SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + +++ E A++ M+E L V ++ L+ I E R+F +
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++P+ YN +I +C+ S A + +M+ K + PN +S+ L+ KE K +
Sbjct: 472 KM-LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLK 530
Query: 234 DVNKVLQMMERYGMKSGVSMYNV 256
+ +++ M G+ ++ N+
Sbjct: 531 EAEDLVEKMIDSGIDPSDTICNL 553
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E + +V ++A++ +L + + + +F E + GI PDL TY
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I P+ ++ AL+ F KE K+ + ++ M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ Y+ I CK + A+ + M +KG PN +T++ I G+C ++
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M+ +GL +++ Y T+++ GD AL +E I+ G P+ T +L+
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVD 391
GL K+ +A E+ V +K K++D
Sbjct: 474 GLCDNGKLKDALEMFK-VMQKSKKDLD 499
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV F L+ + + V ++ + + I+ D+ ++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDIYSFTI 119
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G E++ + + M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P +TY + G CK G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + A E KG P+ T S++ G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S+A++L+ +++ K + +V T+N +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM E L +N L+ + D + E + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T + ++ C++ A + M + ++P+ ++ L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + D M SK PN VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ N+ Y T++ K G+ AL +E I
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+ G P+ T+++++TGL ++ A ++ EK ++D
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAML----EKLQMSMD 682
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M+RK I+ + SF L+ F K + + G+ V +N +H L
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGL 159
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + +EA L +M +PN VT++ + G C++G EA M GL P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 322 SVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+V MCK GD +AL + E I+ +PN +++ L + S+A+ L
Sbjct: 220 ITYGTIVDGMCKIGDTVSALDLLRKMEEISH-IIPNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 380 GLVKEK-FTKNVDTWNEIEAG 399
++EK ++ T+N + G
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVG 299
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R ++ L K +K V F E YG
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWG-FYEESLEYG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML+ G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 150/340 (44%), Gaps = 29/340 (8%)
Query: 83 NKLSEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT------ 132
++S+ F+G I+ YLE R ++ R H + + EH ++
Sbjct: 61 TQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLV 120
Query: 133 ---FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++E E+ S+ FN L+ + + + + VF K +G++P + ++N ++
Sbjct: 121 WGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMN 179
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ + D + + M ++P+ ++ L+ G KE K ED N++ M G+
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVP 239
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A+
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLT 299
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
MS GL P+ Y T++ CK G ETA + K I + + +L++GL
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 370 SKVSEAKEL------IGLVKE---------KFTKNVDTWN 394
+ +A+++ +GL E +F K D W
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + A F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M + GL P
Sbjct: 320 GSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G+VP+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 39/334 (11%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFK 134
A+ I L++ + + + +K + L E F II+ Y +A E AV TF
Sbjct: 58 AYHTMIESLAKIRQYQIMWDLINAMKRKRMLNVETF---CIIMRKYARAQKLEEAVYTFN 114
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF-------IEFPKTY------------ 175
M+++ + ++ AFN L AL +K+ ++ + +F + KTY
Sbjct: 115 VMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPN 174
Query: 176 --------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
G PD+ TY ++ C++ A I+ EMD KP + +
Sbjct: 175 LPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSV 234
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ + E + ED ME+ G+K+ V+ YN I + CK+ K +L+EM KG
Sbjct: 235 LIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKG 294
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
M+PNS T + + G +EA + +R M P++ Y M+ C+ + E AL
Sbjct: 295 MQPNSRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMAL 353
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
K K +VP+ T L+ GL VS A
Sbjct: 354 KVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHA 387
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 2/227 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + I ++ L +A + ++E+ ++ I YG N E AV TF
Sbjct: 193 DIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTF 252
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M+++ ++ V A+NAL+ A +K V RV E G++P+ T N ++
Sbjct: 253 LGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYK-GMQPNSRTLNIILNNLIA 311
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++ A+ + M K +P+A ++ ++ F + + E KV + M++ +
Sbjct: 312 RGETDEAFRVFRRM-IKVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHT 370
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++V I+ LC+ + A +L++M+ KG++P+ VT+ + K+G
Sbjct: 371 FSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEG 417
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 10/240 (4%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
I+ YG +A + A+ KEMD + + ++ L+ I ++ F
Sbjct: 193 DIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTF 252
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ K G+K D+ YN +I AFC+ + + Y +L EMD K ++PN+ + ++
Sbjct: 253 LGMEKN-GVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIA 311
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ ++ +V + M + + Y + I C+ + A + M K P+ T
Sbjct: 312 RGETDEAFRVFRRMIKVC-EPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHT 370
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
+S I G C++G+ A M G+ P+ + + + + K G E L F ++ I
Sbjct: 371 FSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGR-EDVLEFLQQKI 429
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ FKEM+ + V +N+L+ L+ A +KEV F+ G PD T+
Sbjct: 198 KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW-FLNLMVDRGFSPDAFTFTI 256
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+ A IL M K +P+ ++ L+ G + ED K+ + + G
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V YN+ I+ CK +K EA L +EM KG+KP++VTY+ I C+ G A+
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + M G S Y ++ +CK G E A+ + PN L+ G+
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436
Query: 367 AGASKVSEA 375
A K+ EA
Sbjct: 437 CRAGKLEEA 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D F+I I+ L + Q LE + + PD+ + + L GQ E A
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ---LEDAT 306
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF-PKTYGIKPDLDTYNRVIK 189
+ F+ + + ++ +V ++N L+ + E R+F E PK G+KP TYN +I
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK--GLKPSTVTYNTLIG 364
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C+S +A + EM S++ L+ G K E+ + Q +++ K
Sbjct: 365 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP 424
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ ++++ + +C+ K EA DE+ G++P+++ Y+ I G C G EA K
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M G P+S + ++ + K + A+ +E + + P+
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 135/310 (43%), Gaps = 9/310 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D ++ I+ LS A + ++ +L + R PD + G+ + +
Sbjct: 215 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274
Query: 131 RTFKEMDEHKLRH-SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
E+ HK + + +N L+ L + ++ ++F E GIK ++ +YN +I
Sbjct: 275 ----ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF-ESLADRGIKLNVFSYNILIN 329
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+C+ A+ + EM K +KP+ ++ L+ + + K+ M+ G
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+S Y V + LCK EA L + KPN +S + G C+ G EEA K +
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+S +GL P++ Y ++ +C G A+ + KG +P+ T ++ L
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509
Query: 370 SKVSEAKELI 379
+++ EA +L+
Sbjct: 510 NEIHEAIQLL 519
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ Y+ ++ C A EM+ + I + ++ +L+ G + +++V
Sbjct: 176 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 235
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
L +M G + + I LCK K EA+ +L+ M KG +P+ +TY+ + G
Sbjct: 236 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNG 295
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G E+A K + +++ G+ N Y ++ CK + A +E KG P+
Sbjct: 296 LCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPS 355
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ L + +V A++L
Sbjct: 356 TVTYNTLIGALCQSGRVRTAQKL 378
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 3/280 (1%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N AV+ F EM E L + L+ L A+ K + + K D+ T
Sbjct: 91 NGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKAR--KTGLAIKLHEKMKGNCKGDVFT 148
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I + C+ ++ A + +EM I P+ + +L+ G + + ++ + + ME
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + V YN IH L + E L+ M+ +G P++ T++ I G CK+G
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 268
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA++ +M + G P+ Y T++ +C G E A + +G N + L+
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328
Query: 364 TGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
G K+ EA L ++ K K + T+N + L Q
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 9/298 (3%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
++ILE+ P D L ++ +N L ++ E L R N ++
Sbjct: 271 QQILELMHHKGKEP----DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN--VFSY 324
Query: 116 SIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I++ Y + + A R F+EM L+ S +N L+ AL + + +++F+E +
Sbjct: 325 NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-Q 383
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T G L TY ++ C++ A + + + KPN F L+ G + K E
Sbjct: 384 TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 443
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ K + + G++ YN+ I+ LC +EA LL +M KG P+S+T++ I
Sbjct: 444 EAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 503
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
K+ EA + M N SP+ +V ++ + AL ++ KG
Sbjct: 504 QNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 6/233 (2%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSI---LAEMDRKSIKPNASSFGALVAGFYKE 229
K +G+ P + TYN +I +C+ + + Y + L EM I P A +FG L+ G+ K
Sbjct: 153 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 212
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+V + M++ G+ + V YN I LC K E L++EM G+ PN +T+
Sbjct: 213 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 272
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ GFCK G +A + M+ + P+ +Y ++ + G E A+ KE++A
Sbjct: 273 GCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV-KEAMA 331
Query: 350 -KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
KG PN TT L+TG + + A L+ +KEK +V T+N + L
Sbjct: 332 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 384
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G NM H KEM E + + F L+ + RVF E K GI
Sbjct: 176 GAGNMY-HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAAS 233
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN +I C ++ EM+ + PN +FG ++ GF K+ D N +
Sbjct: 234 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 293
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M ++ V +YN+ I +L K +A A+ + M KG+ PN TY+ I GF + G
Sbjct: 294 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 353
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
++ A M G+ + Y ++ +C G E ++ F K++ A G
Sbjct: 354 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG--EESMTFIKQAFAIG 402
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 5/305 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
Q E + + L++E SI++ G+ E A+ F + ++V A++A++
Sbjct: 184 QGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVS 243
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS-DSSSAYSILAEMDRKSI 212
A + +E +VF K G KP+L TYN +I A + D A I EM ++ +
Sbjct: 244 AYGRSGRCREALKVFQAMKKA-GCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGV 302
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ +F +L+A + +ED +V M+R G++ + +N I ++CK + A +
Sbjct: 303 EPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAAS 362
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
++ M K + PN VTYS I G+ K G FEEA Y M SG+ P+ Y T++
Sbjct: 363 IMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYA 422
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVD 391
K G ++ AL CK+ G + T +L+ K +A L +K E NV
Sbjct: 423 KLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVL 482
Query: 392 TWNEI 396
T++ +
Sbjct: 483 TYSAL 487
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F EM + + FN+L+ + +++ +RVF E + GI+ D+ T+N
Sbjct: 288 KQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRR-GIEQDIFTFNT 346
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK----EE------------ 230
+I A C+ A SI+ M K+I PN ++ ++ G+ K EE
Sbjct: 347 LIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG 406
Query: 231 -------------------KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
+++D + MER G+K+ V YN I + K K +A
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAA 466
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L D+M +G+ PN +TYS I + K G ++ + +GL P+ +Y +++
Sbjct: 467 CLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSC 526
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
CK G E A+ +E G PN T SL+
Sbjct: 527 CKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 558
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL----------ALTIAKDYKEVKRVFI 169
YG+ E A+ + +M E +R ++N L+ AL KD + V
Sbjct: 386 YGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERV----- 440
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
G+K D+ TYN +I A+ + A + +M + + PN ++ AL+ + K
Sbjct: 441 ------GLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKA 494
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
++DV+ V +R G+K V +Y+ I S CK +A LL EM G++PN VTY
Sbjct: 495 GMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTY 554
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+ I + G + +A K + +N PNS
Sbjct: 555 NSLIDAY---GRYGQADKLEAVKAN---MPNS 580
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
DR++++ I+ ++ F+ ++++ R L+ + +++I YG+ + A
Sbjct: 410 DRVSYNTLIDIYAKLGRFDDALIACKDME-RVGLKADVVTYNALIDAYGKQGKYKDAACL 468
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F +M L +V ++AL+ + + A +++V VF EF K G+KPD+ Y+ +I + C
Sbjct: 469 FDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEF-KRAGLKPDVVLYSSLIDSCC 527
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK---EEKYEDV-----NKVLQMMER 244
+ A +L EM + I+PN ++ +L+ + + +K E V N V ++ ER
Sbjct: 528 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGER 587
Query: 245 ---YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
K S N H+ A ++ EM G+KPN VT+S + + +
Sbjct: 588 SMEVVRKPPPSQQNASDHT-----GVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCAS 642
Query: 302 FEEA 305
+EA
Sbjct: 643 LQEA 646
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E + +V ++A++ +L + + + +F E + GI PDL TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I P+ ++ AL+ F KE K+ + ++ M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ Y+ I CK + A+ + M +KG PN +T++ I G+C ++
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M+ +GL +++ Y T+++ GD AL +E I+ G P+ T +L+
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVD 391
GL K+ +A E+ V +K K++D
Sbjct: 474 GLCDNGKLKDALEMFK-VMQKSKKDLD 499
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV F L+ + + V ++ + + I+ D+ ++N
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDIYSFNI 119
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G E++ + M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P +TY + G CK G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + A E KG P+ T S++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S+A++L+ +++ K + +V T+N +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM E L +N L+ + D + E + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T + ++ C++ A + M + ++P+ ++ L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + D M SK PN VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ N+ Y T++ K G+ AL +E I
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+ G P+ T+++++TGL ++ A ++ EK ++D
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAML----EKLQMSMD 682
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ TF ++ + L V F LL L + E F + +T +P++ T+ ++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT-CRPNVVTFTTLM 191
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE-EKYEDVNKVLQMMERYGM 247
C A ++L M ++P ++G +V G K+ + +N + +M E +
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V +Y+ I SLCK + ++A+ L EM KG+ P+ TY+ I GFC G + +A++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M +SP+ Y ++ K G + A E + +G +PN T S++ G
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 368 GASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+++ A+ + L+ K + N+ T+N + G
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 4/201 (1%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M+RK I+ + SF L+ F K + + G+ V + +H L
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + +EA +M +PN VT++ + G C++G EA M GL P
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 322 SVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+V MCK GD +AL + E ++ +PN +++ L + S+A+ L
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 380 GLVKEK-FTKNVDTWNEIEAG 399
++EK ++ T+N + G
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVG 299
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 6/269 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A M A+ F+ M S+ +N L+ + A ++ + +F + ++PD
Sbjct: 22 KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDR 81
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I C S ++ A +L+EM K+I N ++ +++ KE K E+ KVL+
Sbjct: 82 WTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEE 141
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V +N + + +A+ + M+ G KP++V+Y I+G K G
Sbjct: 142 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 201
Query: 302 FEEAKKFYR--IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+E+ K M +G PN + T+++ +C+ G+ E AL + G PN T
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+L+ GL A KV +A+EL EK T+
Sbjct: 262 TTLIAGLCRAEKVIQARELF----EKMTQ 286
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 8/317 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVR 131
DR ++ I+ L + G + L E++ + ++ F SII L +A E + +
Sbjct: 80 DRWTYNTLISGLCSSGNTEGARKLLSEMRDK-NIAANVFTYSSIIKSLVKEAK-PEESYK 137
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+EM V AFN ++ + + ++ + V+ ++ G KPD +Y+ +I
Sbjct: 138 VLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES-GYKPDNVSYHILIHGL 196
Query: 192 CESSDSSSAYSILAEMDRKSIK--PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ + IL+EM ++ PN +F L+ G + + E +V M G K
Sbjct: 197 AKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 256
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
Y I LC+ K +A+ L ++M + P++V Y+ I G+CK G+ +EA+K Y
Sbjct: 257 NKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 316
Query: 310 RIMS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R MS +GL P + T++ CK G A E KG + T + L+ GL+
Sbjct: 317 REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSR 376
Query: 369 ASKVSEAKELIGLVKEK 385
A+K+ EA E+ ++EK
Sbjct: 377 ATKLDEALEVYKQMREK 393
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 25/344 (7%)
Query: 49 LKSESNPE---KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG---ISQYLEELK 102
L E+ PE K+LE AA P D AF+ + + +N + Q++ E
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNP----DVFAFNGVMQGFARSNNMEKAREVYQHMVESG 181
Query: 103 TRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRH--SVGAFNALLLALTIA 158
+PD N +H I+++G A + + +++ EM + +V F+ L+ L
Sbjct: 182 YKPD--NVSYH---ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRT 236
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ ++ VF + G KP+ TY +I C + A + +M + I P+A +
Sbjct: 237 GELEKALEVFGSMLEA-GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVA 295
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+ +L+AG+ K ++ K+ + M G++ + +N I CKL K A L+ EM
Sbjct: 296 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 355
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG--LSPNSSVYFTMVYFMCKGG 335
+KG+ ++ TY I G + +EA + Y+ M L P S V F V +CK G
Sbjct: 356 GTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF--VGGLCKTG 413
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + A + + G VPN T + L L +V +A++L+
Sbjct: 414 NIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
G Y+ + SL K A+A + + M S+ P+ VTY+ I C G F +A +
Sbjct: 9 GGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68
Query: 310 RIMSNSG-LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + P+ Y T++ +C G+ E A E K N T S++ L
Sbjct: 69 QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128
Query: 369 ASKVSEAKELI 379
+K E+ +++
Sbjct: 129 EAKPEESYKVL 139
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 15/342 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L ++ + N H+
Sbjct: 260 KLLDEMRDRGCTP----DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN--VITHN 313
Query: 117 IILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
IIL + A + +M SV FN L+ L + + P+
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ- 372
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G +P+ +YN ++ FC+ A L M + P+ ++ ++ K+ K ED
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L + G + YN I L K K +A LLDEM +K +KP+++TYS +
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G ++G +EA KF+ G+ PN+ + +++ +CK + A+ F I +G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
N T+ L+ GLA EA EL+ GL+K+ + V
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+D + V +N +L +L + K+ V + PD+ TY +I+A C S
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR-DCYPDVITYTILIEATCRDS 253
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L EM + P+ ++ LV G KE + ++ K L M G + V +N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + S+C + +A+ LL +ML KG P+ VT++ I C+ G A M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G PNS Y +++ CK + A+ + + +++G P+ T +++T L KV +A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 376 KELIGLVKEKFTKNV-DTWNEIEAGLPQ 402
E++ + K V T+N + GL +
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E + G PD+ TYN +I +C++ + ++A S+L DR S+ P+ ++ ++
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSLC 215
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + +VL M + V Y + I + C+ A LLDEM +G P+ V
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ + G CK+G +EA KF M +SG PN + ++ MC G + A +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ KG+ P+ T L+ L + A +++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E +G PD+ +I+ FC + A IL ++ P+ ++ +++G+
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K ++N L +++R + V YN + SLC K +A +LD ML + P+ +
Sbjct: 184 KA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I C+D A K M + G +P+ Y +V +CK G + A+ F +
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ G PN T ++ + + +A++L+ ++++ F+ +V T+N
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E L+ M+ G P+ + + I GFC+ G +A K I+ SG P+ Y M+
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 329 YFMCKGGDYETALGFC-KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
CK G+ AL + S++ P+ T +++ L + K+ +A E++
Sbjct: 180 SGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVL 227
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
S+ FN +L A+ + Y V ++ IE + I PDL T N ++ FC SSA
Sbjct: 84 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 143
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S L +M + I+P+ + +LV GF +D V ME+ G+K V + + I +L
Sbjct: 144 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 203
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK R A +L M +G+ PN VTYS I G CK G +A++ M + ++PN
Sbjct: 204 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 263
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+ ++ K G K I PN T SL+ GL ++V EA +++ L
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
+ K T NV T++ + G
Sbjct: 324 MISKGCTPNVVTYSTLANGF 343
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI P++ TY+ +I C+S + A L EMD K I PN +F AL+ + K K
Sbjct: 220 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 279
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V+ V +MM + + V Y+ I+ LC + EA +LD M+SKG PN VTYS
Sbjct: 280 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 339
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
GF K ++ K M G++ N+ T++ + G + ALG + G
Sbjct: 340 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 399
Query: 353 VPNFTTMKSLVTGLAGASKVSEA 375
+PN + ++ GL +V +A
Sbjct: 400 IPNIRSYNIVLAGLFANGEVEKA 422
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIK D+ +I C++ A +L M + I PN ++ +L+ G K + D
Sbjct: 188 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 247
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L M+ + V ++ I + K K ++ ++ M+ + PN TYS IYG
Sbjct: 248 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 307
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +EA K +M + G +PN Y T+ K + + + +G N
Sbjct: 308 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 367
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +L+ G A K+ A + G + N+ ++N + AGL
Sbjct: 368 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 36/297 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +I I+ L + + L+ +K R N ++ I ++ A R
Sbjct: 192 DVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 251
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EMD K+ +V F+AL+ A +V V+ + I P++ TY+ +I C
Sbjct: 252 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVY-KMMIQMSIDPNVFTYSSLIYGLCM 310
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L M K PN ++ L GF+K + +D K+L M + G+ +
Sbjct: 311 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 370
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS--------------------------- 286
N I + K A + M S G+ PN
Sbjct: 371 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 430
Query: 287 --------VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+TY+ I+G CK +EA + + + P+ Y M+ + + G
Sbjct: 431 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 487
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 3/198 (1%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++YG N + A++ M +V ++ L + + ++ + P
Sbjct: 301 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 360
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ + + N +IK + ++ A + M + PN S+ ++AG + +
Sbjct: 361 QR-GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + M++ + Y + IH +CK EA L ++ K ++P+ Y+
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479
Query: 293 IYGFCKDGNFEEAKKFYR 310
I + G EA R
Sbjct: 480 IAELNRAGMRTEADALNR 497
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 3/273 (1%)
Query: 108 QNERFHAHS--IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
Q F+ S +I Y ++ AV+ F+ +HK+R +L L + +K V
Sbjct: 62 QRSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVW 121
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+ E + G L +N +++ FC+ + A S+ + + ++P+ SF L+ G
Sbjct: 122 DFYKEVLEC-GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLING 180
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ K ++ ++ M G + V Y++ I+ LCK K EA L +EML G+ PN
Sbjct: 181 YIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPN 240
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VT++ I+G CK+ + A + Y+ M + GLSP+ Y T++Y +CK G+ +
Sbjct: 241 GVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLID 300
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
E I G P+ + +L+ G + A EL
Sbjct: 301 EMIMNGLKPDKISYTTLIDGSCKEGDLEIALEL 333
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ + + + VF K +G++P + ++N +I +
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITK-WGLRPSVVSFNTLINGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ D + + + M +P+ ++ L+ G KE K ++ N++ M G+
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ IH CK K A + +MLS+G+ P+ +TY+ IYG CK G ++ M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+GL P+ Y T++ CK GD E AL + I + + +L++ L +
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRA 362
Query: 373 SEAKELI 379
S+A++++
Sbjct: 363 SDAEKML 369
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G +PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHAS-GAQPDVYTYSILI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A + EM + PN +F L+ G K EK + ++ + M G+
Sbjct: 214 NGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK + + L+DEM+ G+KP+ ++Y+ I G CK+G+ E A +
Sbjct: 274 PDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALEL 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 334 RNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMII 388
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PDL TYN +I C+ + + ++ EM +KP+ S+ L+ G KE E
Sbjct: 271 GLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIA 330
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + ++ Y I LC+ + ++A+ +L EMLS G+KP++ TY+ I
Sbjct: 331 LELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSP 319
FCK + + A K R M G P
Sbjct: 391 FCKKRDSKTASKLLREMQRDGPLP 414
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L + + AVR + + ++ + N +LL L + V+R+F P
Sbjct: 142 LLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----- 196
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ T+N VI C+ + A ++ M P+ ++ +L+ G+ K + E+V +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + G + V YN I+ K +A + EM G+ N VT S F+ FCK
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G EA K + M G+ PN Y ++V CK G + A+ E + +G VPN T
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+V GL KV+ A +++ L++ K
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVK 406
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 139/312 (44%), Gaps = 1/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN S+ + Y E+K + N + + + + + A++ F
Sbjct: 268 DVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLF 327
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M + + + +L+ A + + E G+ P++ TY ++ C+
Sbjct: 328 AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCK 386
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L+ M+R +K N + L+ G + + E +L M+ GM+ VS+
Sbjct: 387 EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSL 446
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I LCK++K EAK+LL +M G++PN+V Y+ + F K G EA +
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIP 506
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+SGL PN Y ++ +CK G A+ + G PN +L+ G +S
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566
Query: 374 EAKELIGLVKEK 385
+A L+ + +K
Sbjct: 567 KAVHLMNEMVDK 578
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M V +N+L+ + +EV+ + E K+ G D+ TYN +I F
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKS-GCAADVVTYNALINCFS 280
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ AYS EM R + N + V F KE + K+ M GM
Sbjct: 281 KFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEF 340
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + CK + +A LLDEM+ +G+ PN VTY+ + G CK+G A +M
Sbjct: 341 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLM 400
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G+ N +Y T+++ + E AL E KG + + +L+ GL K+
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKL 460
Query: 373 SEAKELI 379
EAK L+
Sbjct: 461 DEAKSLL 467
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G++ D+ Y +I C+ A S+L +MD ++PN + ++ F+K K
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ +L + G++ V Y I LCK EA + D+M G+ PN Y+
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFCK G+ +A M + G+S + VY +++ K GD + A + I G
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615
Query: 353 VPNFTTMKSLVTGLAGASKVSEAK----ELIG 380
+ ++G + + EA+ E+IG
Sbjct: 616 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIG 647
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 3/254 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+E A+ EM + V + L+ L + E K + + G++P+ Y
Sbjct: 425 SERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDC-GLRPNTVIYT 483
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK-YEDVNKVLQMMER 244
++ AF ++ S A ++L ++ ++PN ++ AL+ G K YE ++ +M E
Sbjct: 484 TIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE- 542
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ V +Y I CK+ ++A L++EM+ KGM + V Y+ I G K G+ +
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M +GL + Y + C + A G E I G P+ T L+
Sbjct: 603 AFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662
Query: 365 GLAGASKVSEAKEL 378
+ EA L
Sbjct: 663 KYQKLGNMEEASSL 676
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 7/227 (3%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+ KL EA + +++ RP N + + + +A AV ++ + L
Sbjct: 457 VQKLDEAK---SLLHKMDDCGLRP---NTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ +V + AL+ L A E F + + G+ P++ Y +I FC+ S A
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKM-RELGLDPNVQVYTTLIDGFCKIGSLSKAV 569
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++ EM K + + + +L+ G K+ + + M G++ + Y I
Sbjct: 570 HLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGF 629
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
C + EA+ +L EM+ G+ P+ Y+ I + K GN EEA
Sbjct: 630 CNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 126 TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
T A+ ++M+E + +V ++A++ +L + + + +F E + GI PDL TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I FC S S A +L EM + I P+ ++ AL+ F KE K+ + ++ M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ YN I CK + A+ + M +KG P+ T++ I G+C ++
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M GL N+ Y T+++ C GD AL ++ I+ G P+ T +L+
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473
Query: 365 GLAGASKVSEAKEL 378
GL K+ +A E+
Sbjct: 474 GLCDNGKLKDALEM 487
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 8/306 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ +L PD+ H + + + + A+ F +M E R +V F L+ L
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVS---EALDFFHQMFETTCRPNVVTFTTLMNGL-- 194
Query: 158 AKDYKEVKRV-FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS-IKPN 215
++ + V+ V ++ G++P TY ++ C+ D+ SA ++L +M+ S I PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ A++ K+ ++ D + M+ G+ + YN I C + ++A+ LL
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EML + + P+ VTY+ I F K+G F EA + Y M G+ PN+ Y +M+ CK
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 374
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ A KG P+ T +L+ G GA ++ + EL+ + + N T+N
Sbjct: 375 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 434
Query: 395 EIEAGL 400
+ G
Sbjct: 435 TLIHGF 440
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F +M + SV F L+ + + V ++ + + I+ D+ ++N
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDIYSFNI 119
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK FC S A S ++ + + P+ +F L+ G E++ + M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V + ++ LC+ + EA ALLD M+ G++P +TY + G CK G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 KFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
R M S + PN +Y ++ +CK G + A E KG P+ T S++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ + S+A++L+ +++ K + +V T+N +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM E + + +N++++ + + + +++ E + I PD+ TYN +I
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK-ISPDVVTYNALI 332
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AF + A + EM + I PN ++ +++ GF K+++ + + +M G
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 392
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V + I C ++ + LL EM +G+ N+VTY+ I+GFC G+ A
Sbjct: 393 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 452
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------------GWVPNF 356
+ M +SG+ P+ T++ +C G + AL K ++ K G P+
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDLDASHPFNGVEPDV 511
Query: 357 TTMKSLVTGLAGASKVSEAKEL 378
T L+ GL K EA+EL
Sbjct: 512 LTYNILICGLINEGKFLEAEEL 533
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 12/271 (4%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A + + EM L + +N L+ + D + + + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
D+ T N ++ C++ A + M + ++P+ ++ L+ G
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + M SK PN VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ ++ +Y T++Y K G+ AL +E I
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 643
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G P+ T+++++TG ++ A ++
Sbjct: 644 SSGVYPDTITIRNMLTGFWSKEELERAVAML 674
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+ +M+RK I+ + SF L+ F K + + G+ V + +H L
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C + +EA +M +PN VT++ + G C++G EA M GL P
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 322 SVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T+V MCK GD +AL + E ++ +PN +++ L + S+A+ L
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 380 GLVKEK-FTKNVDTWNEIEAGL 400
++EK ++ T+N + G
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGF 300
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 139/309 (44%), Gaps = 7/309 (2%)
Query: 74 DRLAFSIAINKLSEANYFN-GISQY--LEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
+ ++++ I+ L EA + GIS + + E P ++ H+ L+G E +
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHA--LFGNDRNLE-GM 339
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F EM E +V + ++ A+ + E +R+ E + G+ P + TYN +I+
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK-GLVPSVVTYNALIRG 398
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+CE +A IL M+ + +PN ++ L+ GF K + +L M +
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPS 458
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN IH CK A LLD + G+ P+ TYS FI CK EEA +
Sbjct: 459 LVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFN 518
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ G+ N +Y ++ CK G + A+ + ++ +PN +T SL+ G+
Sbjct: 519 SLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG 578
Query: 371 KVSEAKELI 379
KV E ++
Sbjct: 579 KVQEGLSMV 587
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E A+ M+ + R + +N L+ + K + + + ++ + P
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES-KLTP 457
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L TYN +I C++ SAY +L + + P+ ++ + K ++ E+ +
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++ G+K+ MY I CK K EA +LL+ M S+ PNS TY+ IYG CK+
Sbjct: 518 NSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKE 577
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +E MS G+ P + Y ++ M + GD++ A + ++ G P+ T
Sbjct: 578 GKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTY 637
Query: 360 KSLVTGLAGASKVSEAKELIGLVKE 384
+ + + V EA+ ++ + E
Sbjct: 638 TAFIHTYCTSGNVKEAEGMMARMIE 662
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 14/289 (4%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E RP NER + I + + A+ +M E KL S+ +N+L+
Sbjct: 415 MESNNCRP---NERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A + ++ ++ K G+ PD TY+ I C+S A + + K IK N
Sbjct: 472 AGHFDSAYKL-LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+ AL+ G K K ++ +L+ M S YN I+ +CK K E ++++ M
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
G+KP TY+ I ++G+F+ A + + M + G P+ Y ++ C G+
Sbjct: 591 SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV 650
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ A G I G +P+ T L++ A E +GL + F
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLLIS----------AYERLGLAYDAF 689
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 4/269 (1%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++ ++ K + SV ++N LL+ L E+KRV+ E I P++ T N ++ A+ +
Sbjct: 168 RDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDM-IVPNIYTLNTMVNAYSK 226
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++++ + + P++ ++ +L+ G+ + KV MM G +
Sbjct: 227 MGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS 286
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG-FCKDGNFEEAKKFYRIM 312
Y IH LC+ + E +L +M P TY+ I+ F D N E + M
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNL-EGMDLFNEM 345
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
PN Y MV MCK + + E + KG VP+ T +L+ G ++
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405
Query: 373 SEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
A E++GL++ + N T+NE+ G
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGF 434
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 2/283 (0%)
Query: 107 LQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
L + F S+IL Y + N A + F M R + ++ ++ L A E
Sbjct: 245 LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGI 304
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+F + + P + TY +I A + + + EM +S +PN ++ +V
Sbjct: 305 SLFKKM-REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDA 363
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
KE K ++ ++L M G+ V YN I C+ + A +L M S +PN
Sbjct: 364 MCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPN 423
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
TY+ I GF K + +A M S L+P+ Y ++++ CK G +++A
Sbjct: 424 ERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLD 483
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
G VP+ T + L + ++ EA +L +KEK K
Sbjct: 484 LLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GIK + Y +I C++ A S+L M + PN+S++ +L+ G KE K
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ +++ M + G+K V+ Y + I + + A + ++M+S G KP+ TY+ F
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I+ +C GN +EA+ M +G+ P+S Y ++ + G A K + G
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700
Query: 353 VPNFTTMKSLV 363
P+ +L+
Sbjct: 701 DPSHPIWNNLI 711
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 130/295 (44%), Gaps = 15/295 (5%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGIS 95
+ + A+TLL K+LE + LTP + ++ I+ +A +F+
Sbjct: 434 FSKRKHVHKAMTLLS------KMLE----SKLTPS----LVTYNSLIHVQCKAGHFDSAY 479
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ L+ LK + ++ ++ I ++ E A F + E ++ + + AL+
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
A E + +E + P+ TYN +I C+ S++ M + +KP
Sbjct: 540 CKAGKIDEAISL-LERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+++ L+ +E ++ N+V M +G K V Y IH+ C EA+ ++
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA 658
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
M+ G+ P+S+TY+ I + + G +A + M ++G P+ ++ ++++
Sbjct: 659 RMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIWY 713
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 174/404 (43%), Gaps = 59/404 (14%)
Query: 51 SESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY--------LEELK 102
SE P +++ + R+ L E+++ + A + K ++ +++ I Y L ++
Sbjct: 45 SECPPRRVVSVSRSF-LQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVF 103
Query: 103 TRPDLQNERFHAHSIIL----YGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTI 157
R + F + IL YG+A++ E A+ F M DE + R +V +FN++L +
Sbjct: 104 DRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQ 163
Query: 158 AKDYKEVKRVFIEFPKT-----YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
+ +EF + I P++ ++N VIKA C+ A + EM +
Sbjct: 164 EGLFHRA----LEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKC 219
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ ++ L+ G KE++ ++ +L M+ G +NV I+ LCK
Sbjct: 220 EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 279
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L+D M KG PN VTY+ I G C G ++A M S PN Y T++ +
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339
Query: 333 KGG--------------------DY---------------ETALGFCKESIAKGWVPNFT 357
K G +Y E A+G K+ + KG PN
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ GL K+ EAKE++ +V + T N T++ + G
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 443
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 11/305 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYG--QANMTEHAV 130
L+F++ I + + + + E+ K PD+ + ++ G + + + AV
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV-----FTYCTLMDGLCKEDRIDEAV 243
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
EM S FN L+ L D V ++ ++ G P+ TYN +I
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL-VDNMFLKGCVPNEVTYNTIING 302
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C A S+L M PN ++G L+ G K+ + D +L +E G +
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y+ I L K K EA L +M+ KG +PN V YS I G C++G +EAK+
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G +PN+ Y +++ K G+ + A+ KE VPN L+ GL
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482
Query: 371 KVSEA 375
K+ EA
Sbjct: 483 KLREA 487
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 24/245 (9%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ Y+ +I C A IL EM K PNA ++ +L+ GF+K +
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + M + Y+V IH LC+ K EA + ML +G++P+ V YS I+G
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512
Query: 296 FCKDGNFEEAKKFYRIM--SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
C G+ E K + M S P+ Y ++ +CK A+ + +G
Sbjct: 513 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 572
Query: 354 PNFTT---------------------MKSLVTGLAGASKVSEAKELIGLVKEKF-TKNVD 391
P+ T + LV L ++ A ++I ++ +KF N
Sbjct: 573 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 632
Query: 392 TWNEI 396
TW I
Sbjct: 633 TWERI 637
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 137/348 (39%), Gaps = 73/348 (20%)
Query: 71 SHLDRLAFSIAI-NKLSEANYFNGISQ---------YLEELKTRPDLQNERFHAHSIILY 120
S LDR+ S + N ++ NG+ + L L+ R NE +A+S ++
Sbjct: 314 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE--YAYSTLIS 371
Query: 121 G--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
G + +E A+ +K+M E + ++ ++AL+ L E K + E G
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK-GCT 430
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TY+ +IK F ++ +S A + EM + + PN + L+ G ++ K + +
Sbjct: 431 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 490
Query: 239 LQMMERYGMKSGV----SM---------------------------------YNVRIHSL 261
M G++ V SM YN+ + +L
Sbjct: 491 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 550
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF------CKDGN--FEE--------- 304
CK + A LL+ ML +G P+ +T + F+ +DG +E
Sbjct: 551 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQ 610
Query: 305 ----AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
A K +M L PN+S + ++ +CK + + C S+
Sbjct: 611 RIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSL 658
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 77 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 135
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +FC+ + A S+ + + ++P+ SF L+ G+ K +
Sbjct: 136 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXF 195
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + M+ G++ V Y+V I+ LCK K + L DEML G+ PN VT++ I G
Sbjct: 196 RLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGH 255
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 256 CKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 315
Query: 357 TTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 316 ITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQ 362
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAM 201
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 202 QASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRV 261
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ VTY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 262 DLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 321
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + I + + +L++GL + +A+++ +GL
Sbjct: 322 IDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 381
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 382 KPEIGTYTMIINEFCKKGDVWT 403
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + + G++PD+ TY+ +I
Sbjct: 159 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRL-KKAMQASGVQPDVYTYSVLI 217
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S + EM + PN +F L+ G K + + ++ + M +
Sbjct: 218 NGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 277
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF---------------- 292
+ YN I+ LCK +A+ L+DEM KG+KP+ +TY+
Sbjct: 278 PDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 337
Query: 293 -------------------IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
I G C++G +A+K R M + GL P Y ++ CK
Sbjct: 338 RXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 397
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD T KE G+VP+ T L+ G
Sbjct: 398 KGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 1/210 (0%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ T +++ + +S+ ++ + E + + + + F ++ + +
Sbjct: 24 IHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGIITAYLE 82
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + + + L KL+ +E L G +
Sbjct: 83 SGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYF 142
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ FCK+G A+ + ++ GL P+ + T++ K GD K
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ + EL
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDXNEL 232
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
L + RFH+ S+ N + A+ +F M S FN LL ++ K Y V
Sbjct: 35 LSHNRFHSKSL----NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFS 90
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ + ++GI PD+ T N +I +FC + A+S+LA++ + +P+ ++F L+ G
Sbjct: 91 LSNQM-DSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGL 149
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
E K D + M G + V Y I+ LCK+ A LL M +P+
Sbjct: 150 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 209
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V Y+ I CKD EA + M G+SP+ Y ++++ +C +++ +
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
I +P+ ++V L K++EA +++ ++ NV T+N + G
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 323
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 6/256 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG--IKPDLDT 183
T A+R + M++ + V + +++ +L KD ++V F F K G I PD+ T
Sbjct: 190 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSL--CKD-RQVTEAFNLFSKMVGQGISPDIFT 246
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I + C + ++L +M I P+ F +V KE K + + V+ MM
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G++ V YN + C + EA + D M+ G PN ++Y+ I G+CK +
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M L PN+ Y T+++ C G + A+ E +A G +P+ T + L+
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425
Query: 364 TGLAGASKVSEAKELI 379
L S + EA L+
Sbjct: 426 DYLCKKSHLDEAMALL 441
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ TY +I C+ ++++A +L M++ + +P+ + +++ K+ + +
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ + Y IHSLC L + LL++M++ + P+ V +S +
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G EA +M G+ PN Y ++ C + + A+ + G+ PN
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ +L+ G ++ +A L + +++ N T+N +
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 3/258 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ M E AV+ F M + +V ++N L+ + + +F E + I P+
Sbjct: 327 QSEMDE-AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI-PNT 384
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C A ++ EM P+ +++ L+ K+ ++ +L+
Sbjct: 385 VTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E M + +Y + I +C+ + A+ + + SKG++PN TY+ I G C+ G
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 503
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA K + M +G SP+ Y T+ + + + A+ +E +A+G+ + +T
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 563
Query: 362 LVTGLAGASKVSEAKELI 379
LV L K+++
Sbjct: 564 LVEMLCDDKLDQSVKQIL 581
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ K ++ + + + ++ + A + + + +F + G++P++ TY
Sbjct: 435 DEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL-SSKGLRPNVRTYTI 493
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C A + EMD P+ ++ + G + ++ ++LQ M G
Sbjct: 494 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 553
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ VS + + LC + K +L E +
Sbjct: 554 FSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 585
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 139/290 (47%), Gaps = 8/290 (2%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ I+ G M T A+ ++M+E +++ +V ++A++ L + + +F E
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ GI P+L TYN +I FC S S A +L EM + + P+ +F L+ KE
Sbjct: 274 M-QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEG 332
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K+ + ++ M G+ YN I K + A+ + M +KG P+ +T+S
Sbjct: 333 KFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFS 392
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+C ++ K MS GL N+ Y T+++ C+ G+ AL +E I+
Sbjct: 393 ILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISS 452
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT---WNEIE 397
G PN T +L+ GL K+ +A E+ V +K ++D +N++E
Sbjct: 453 GVCPNVVTCNTLLDGLCNNGKLKDALEMFK-VMQKSKMDLDASHPFNDVE 501
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 47/352 (13%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + FS+ IN L + F + E+ R + N + I + + N + A R F
Sbjct: 317 DVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M V F+ L+ AK + ++ E + G+ + TY +I FC+
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR-GLVANTITYTTLIHGFCQ 435
Query: 194 SSDSSSAYSILAEMDRKSIKPNA------------------------------------- 216
+ ++A +L EM + PN
Sbjct: 436 LGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495
Query: 217 ---------SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++ L+ G E K+ + ++ + M G+ YN I LCK +
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA + D M SKG P+ VT++ I G+CK G + + + M G+ N+ Y T+
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ C+ G+ AL +E I+ G P+ T+++++TGL ++ A + +
Sbjct: 616 IHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ TF ++ + S+ F+ LL L + E F + KP++ + ++
Sbjct: 130 ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI-----CKPNVIAFTTLM 184
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK-EEKYEDVNKVLQMMERYGM 247
C A ++L M ++PN ++G +V G K + +N + +M E +
Sbjct: 185 NGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRI 244
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
K V +Y+ I L K + +A+ L EM KG+ PN TY+ I GFC G + EA++
Sbjct: 245 KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQR 304
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
R M +SP+ + ++ + K G + A E + +G +PN T S++ G +
Sbjct: 305 LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364
Query: 368 GASKVSEAKELIGLVKEK 385
+++ A+ + L+ K
Sbjct: 365 KQNRLDAAERMFYLMATK 382
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I ++ ++ +IK FC S A S ++ + P+ +F L+ G E++ V+
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDR---VS 163
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ L + K V + ++ LC+ + EA ALLD M+ G++PN +TY + G
Sbjct: 164 EALHFFHQI-CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222
Query: 297 CKDGNFEEAKKFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G+ A R M S + PN +Y ++ + K G A E KG PN
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
T ++ G + + SEA+ L+ + + K + +V T++
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 35/239 (14%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F E A + M R P F L+ + E+ + V + + ME +
Sbjct: 50 GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ + + I C K A + ++ G P+ VT+S ++G C + EA F+
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169
Query: 310 ----------------------RI---------MSNSGLSPNSSVYFTMVYFMCKGGDYE 338
R+ M GL PN Y T+V MCK GD
Sbjct: 170 HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229
Query: 339 TALGFCK--ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+AL + E +++ PN +++ GL + ++A+ L ++EK + N+ T+N
Sbjct: 230 SALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 1/252 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M ++ +V FN LL +E ++ E T GI P++ TYN ++ +C
Sbjct: 276 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYC 334
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A ++L M R P+ +F +L+ G+ ++ +D KV + + + G+ +
Sbjct: 335 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 394
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + C+ K A+ L EM+S G+ P+ +TY + G C +G E+A + + +
Sbjct: 395 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S + +Y T++ MCKGG E A KG PN T +++GL +
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 514
Query: 373 SEAKELIGLVKE 384
SEA L+ ++E
Sbjct: 515 SEANILLRKMEE 526
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PD+ + I G ++ A+ ++M+E ++ V ++ ++ +L
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSL---ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GIK + TYN +++ C++ + +L +M + I PN +F L+
Sbjct: 237 AISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K ++ N++ + M G+ + YN + C + +EA +LD M+
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VT++ I G+C ++ K +R +S GL N+ Y +V C+ G + A
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E ++ G +P+ T L+ GL K+ +A E+ L K K + + I G+
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 2/256 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ L + E V ++ G +PD+ TYN ++ C S D+S A +L +M
Sbjct: 151 FNTLIKGLFLEGKVSEAV-VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ +++K + ++ ++ ++ + + + ME G+KS V YN + LCK K
Sbjct: 210 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 269
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+ LL +M+S+ + PN +T++ + F K+G +EA + Y+ M G+SPN Y T+
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 329
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKF 386
+ C A + P+ T SL+ G +V + ++ + K
Sbjct: 330 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 389
Query: 387 TKNVDTWNEIEAGLPQ 402
N T++ + G Q
Sbjct: 390 VANAVTYSILVQGFCQ 405
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDT 183
+ A+ F+EM + S+ F+ A+ K + V ++F K GI ++ T
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV----LDFCKQLELNGIAHNIYT 115
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I FC + AYS+L ++ + +P+ ++F L+ G + E K + ++ M
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN ++ +C+ + A LL +M + +K + TYS I C+DG +
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A ++ M G+ + Y ++V +CK G + K+ +++ VPN T L+
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
K+ EA EL ++ + N+ T+N + G
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 332
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
KL EAN + +E+ TR N + + Y N A M +K
Sbjct: 303 KLQEAN------ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ F +L+ + K + +VF K G+ + TY+ +++ FC+S A +
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEEL 415
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM + P+ ++G L+ G K E ++ + +++ M G+ MY I +CK
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A L + KG+KPN +TY+ I G CK G+ EA R M G +PN
Sbjct: 476 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 535
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
Y T++ + GD + +E + G+ + +++K ++ L A K
Sbjct: 536 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+N +IK S A ++ M +P+ ++ ++V G +
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME +K+ V Y+ I SLC+ A +L EM +KG+K + VTY+ + G
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + + M + + PN + ++ K G + A KE I +G PN
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T +L+ G +++SEA ++ L V+ K + ++ T+ + G
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A+ L EM+ +G+ PN++TYS I GFCK+ +EA + +M G +S + + +
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG---DSDIRYLLAG 774
Query: 330 FM 331
M
Sbjct: 775 LM 776
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R ++ L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ +M+ G+ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + YR M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQ 358
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHXFCKEGEIRLAQSVFDSITK-WGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A MS GL P+ Y T+
Sbjct: 258 DLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ CK GD ETA + K I + + +L++GL + +A++++
Sbjct: 318 IDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKML 369
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G+ PD+ TY+ +I
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL-KSVMQASGVHPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEY 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P Y ++ CK
Sbjct: 334 RKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD T KE G+VPN T
Sbjct: 394 KGDVWTGSKLLKEMQRXGYVPNVVT 418
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDXYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + I L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ FCK+G A+ + ++ GL P+ + T++ K GD + GF +S
Sbjct: 138 FFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDE--GFRLKS 195
Query: 348 I--AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ A G P+ T L+ GL SK+ +A EL
Sbjct: 196 VMQASGVHPDVYTYSVLINGLCKESKMDDANEL 228
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 10/328 (3%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFN-GISQYLEELKTR---PDLQ 108
S E +LE R ++P R A SI I S++ + Y LKT PD+
Sbjct: 111 SEMEVVLENMRVEEMSPT----REAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVI 166
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRV 167
+ ++ G+ + E+D R V ++ ++ + K+ K E R
Sbjct: 167 ACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDR-CVDNYSTCIMVKGLCKEGKLEEGRK 225
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE G P++ YN +I +C+ D A + E+ K P ++GA++ GF
Sbjct: 226 LIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFC 285
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K+ ++ ++++L M G+ V +YN I + K +A ++ M+ G KP+ V
Sbjct: 286 KKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIV 345
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I G C+DG EA + GL PN Y +++ CK G Y+ A + E
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 405
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+G P+ T +LV GL A +V A
Sbjct: 406 TERGHKPDLVTYGALVHGLVVAGEVDVA 433
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
K+SEA+ Q LE+ + + N+ + I Y + + A EM E +
Sbjct: 359 KVSEAD------QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 412
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ + AL+ L +A + +V E G+ PD YN ++ C+ +A +
Sbjct: 413 DLVTYGALVHGLVVAGEV-DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
LAEM +S+ P+A + LV GF + ++ K+ ++ GM G+ YN I CK
Sbjct: 472 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+A A ++ M + + P+ TYS I G+ K + + A+K +R M PN
Sbjct: 532 FGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVT 591
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y +++ C+ GD +L +E A G VPN T L+ +K+ +A
Sbjct: 592 YTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDA 643
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ D + +FIE K G P ++TY +I FC+ D + +L EM
Sbjct: 242 YNTLIDGYCKKGDMEMANGLFIEL-KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM 300
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + + N + ++ YK + ++ M G K + YN I C+ K
Sbjct: 301 NSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKV 360
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+EA LL++ L KG+ PN +Y+ I+ +CK G ++ A + M+ G P+ Y +
Sbjct: 361 SEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGAL 420
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
V+ + G+ + AL ++ + +G P+ L++GL K+ AK L+
Sbjct: 421 VHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLL 472
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD TY+ VI + + D A + EM + KPN ++ +L+ GF ++
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSL 609
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M+ G+ V Y++ I S CK K +A + +EML PN VT+++ + GF
Sbjct: 610 KIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669
Query: 297 CKDGN---------FEEAKK-----FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
K+G F+E K+ F+ M + G +P S+ Y +++ +C+ G + TAL
Sbjct: 670 SKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQ 729
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ +KG +P+ + +L+ G+ + E K ++
Sbjct: 730 LSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIV 766
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE---VKRV-FIEFPKTYGIKPDLDTYNR 186
R EM+ L +V +N + I YK VK V IE G KPD+ TYN
Sbjct: 295 RLLMEMNSRGLTVNVQVYNTI-----IDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 349
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV-NKVLQMMER- 244
+I C S A +L + K + PN S+ L+ + K+ Y+ N +++M ER
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409
Query: 245 -------YG----------------------MKSGV----SMYNVRIHSLCKLRKCAEAK 271
YG ++ GV +YN+ + LCK K AK
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
LL EML + + P++ Y+ + GF ++GN +EA+K + + G++P Y M+
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
CK G + A+ + P+ T +++ G + A+++ +VK K NV
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589
Query: 391 DTWNEIEAGL 400
T+ + G
Sbjct: 590 VTYTSLINGF 599
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSA---YSILAEMDRKSIK-PNASSFGALVAGFYK 228
KTY PD+ N ++ + A Y + E+D + + S +V G K
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCK 216
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K E+ K+++ G + YN I CK A L E+ KG P T
Sbjct: 217 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 276
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y I GFCK G+F+ + M++ GL+ N VY T++ K G A+ + I
Sbjct: 277 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
G P+ T +L++G KVSEA +L+ GL+ KF+
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK + +L L K +K V + E + G
Sbjct: 71 ITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILEC-G 129
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N +++ FC+ D A +L + + ++P+ SF L+ G+ + ++
Sbjct: 130 YPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGF 189
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KGM PN VT++ I G
Sbjct: 190 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGH 249
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK G+ + A E +G P+
Sbjct: 250 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDK 309
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 310 ITYTTLIDGCCKEGDMETAFE 330
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 14/307 (4%)
Query: 86 SEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT--------- 132
S+ F+G I+ YLE R ++ R H + L + EH ++
Sbjct: 62 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGF 121
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ D + + V K +G++P + ++N +I +
Sbjct: 122 YKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITK-WGLRPSVVSFNTLINGYI 180
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M GM
Sbjct: 181 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGV 240
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G ++A M
Sbjct: 241 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEM 300
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ETA K I + + +L++GL +
Sbjct: 301 SMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRS 360
Query: 373 SEAKELI 379
+A++++
Sbjct: 361 VDAEKML 367
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
LR SV +FN L+ D E R+ + G++PD+ TY+ +I C+ S A
Sbjct: 165 LRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLINGLCKESKMDDA 223
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ EM K + PN +F L+ G K + + ++ + M + + YN I+
Sbjct: 224 NELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 283
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK + +A L+DEM +G+KP+ +TY+ I G CK+G+ E A + + M + +
Sbjct: 284 LCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLD 343
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
VY ++ +C+ G A +E ++ G PN
Sbjct: 344 DVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPN 378
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ + A+ ++ EM + +KP+ ++ L+ G KE E
Sbjct: 270 LSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAF 329
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + M + ++ +Y I LC+ + +A+ +L EMLS G+KPN+
Sbjct: 330 EHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNT 379
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 87/225 (38%), Gaps = 18/225 (8%)
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-FGALVA--GFYK 228
P + L +Y +I C S A S++ + + K +AS+ F A++ G +
Sbjct: 2 PTNSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQR 61
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAEAKAL 273
+ Y + +E ++ + Y + + L KL+
Sbjct: 62 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGF 121
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
E+L G + ++ + FCK+G+ A+ ++ GL P+ + T++ +
Sbjct: 122 YKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIR 181
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
GD + A G P+ T L+ GL SK+ +A EL
Sbjct: 182 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANEL 226
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +M+ K+ +V ++ ++ +L + + +F E + G++P++ TY+ +I
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLI 302
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A +L++M + I PN +F AL+ F KE K + K+ M + +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ I+ C + EAK + + M+SK PN VTY+ I GFCK +E +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS GL N+ Y T+++ + D + A K+ ++ G PN T +L+ GL
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L + K + T+N + G+
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R +M E K+ +V FNAL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLI 372
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K PN ++ L+ GF K ++ ++ ++ + M + G+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y IH + R C A+ + +M+S G+ PN +TY+ + G CK+G E+A
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ + S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPDVIIYNTMISGFC 551
Query: 368 GASKVSEAKELIGLVKE 384
EA L ++E
Sbjct: 552 RKGLKEEADALFRKMRE 568
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ FN LL A+ K + V + E + GI +L TYN
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG-EKMQRLGISHNLYTYNI 125
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ G+ ++ D ++ M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + IH L K +EA AL+D M+ +G +PN VTY + G CK G+ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + N +Y T++ +CK + AL E KG PN T SL++ L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T+N +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D A+++L +M+ I+ N + ++ K +D +
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ME G++ V Y+ I LC + ++A LL +M+ + + PN VT++ I F K+
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA+K Y M + P+ Y +++ C + A + I+K PN T
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ G A ++ E EL + ++ N T+ + G Q
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + + EM + + + +++L+ + E K +F E + P++ TYN +I
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLI 407
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ + EM ++ + N ++ L+ GF++ ++ V + M G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN + LCK K +A + + + M+P TY+ I G CK G E+
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ +S G+ P+ +Y TM+ C+ G E A ++ G +P+ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ N V YS I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A + M N G+ PN Y +++ +C + A + I + PN
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ EA++L ++K ++ T++ + G
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ S A + M + P+ F L++ K +K++ V + + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R G+ + YN+ I+ C+ + + A ALL +M+ G +P+ VT S + G+C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G PN T +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 364 TGLAGASKVSEAKELI 379
GL + A L+
Sbjct: 233 NGLCKRGDIDLAFNLL 248
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A + V F+EM + L + + L+ A+D + VF + G+ P
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHP 468
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C++ A + + R ++P ++ ++ G K K ED +
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ G+K V +YN I C+ EA AL +M G P+S T
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 193/446 (43%), Gaps = 61/446 (13%)
Query: 12 NLFSQKHHRY--LATSSILSSGDKTP-LTSKDKTRAAL-------------TLLKSESNP 55
+L HHR+ +++I+++ TP L K + + +L+ + +P
Sbjct: 3 SLIPSHHHRFSTAISAAIVANTTTTPSLPQSYKIQPPIKPWPHRLNPKLLSSLISRQHDP 62
Query: 56 EKILEICRAAA---LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPD-LQNER 111
L+I A P SH + +I + KLS+ F+ I L L++ P E
Sbjct: 63 HFSLQIFLHAQNHHKPPFSHNPQTYQAIFL-KLSKFRCFSEIESLLAGLRSSPPHCCGEE 121
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
I YG A A++TF ++ +R SV + NALL +L K Y+ VF
Sbjct: 122 PIVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNC 181
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ + + P++ + N ++KA C+ ++ A +L EM + PN S+ ++ GF
Sbjct: 182 GERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGD 241
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ KV + + G V+ Y V + C+L K +A ++D M G++PN VTY
Sbjct: 242 MDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGV 301
Query: 292 FIYGFCK-----------------------------------DGNFEEAKKFYRIMS--N 314
I +CK +GN E+A + +R++S N
Sbjct: 302 MIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKN 361
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
GL+ + V T+++++CK G A E KG V + T +L+ GL ++ E
Sbjct: 362 CGLN-GAVVVSTLIHWLCKKGKVLEARNVFDE-FGKGSVASLLTYNTLIAGLCEGGELCE 419
Query: 375 AKELI-GLVKEKFTKNVDTWNEIEAG 399
A L +V++ N T+N + G
Sbjct: 420 AARLWDDMVEKGVAPNAFTYNMLIKG 445
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 42/311 (13%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N E AV+ EM L +V ++ +L D +VF E G PD+
Sbjct: 203 KGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREV-LDRGWSPDV 261
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQ 240
+Y ++ FC A ++ M+ ++PN ++G ++ + KE+K E VN +
Sbjct: 262 TSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIED 321
Query: 241 MM----------------------------ERYGMKS-------GVSMYNVRIHSLCKLR 265
M+ E + M S G + + IH LCK
Sbjct: 322 MIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKG 381
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K EA+ + DE KG + +TY+ I G C+ G EA + + M G++PN+ Y
Sbjct: 382 KVLEARNVFDE-FGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYN 440
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG--LAGASKVSEAKELIGLVK 383
++ CK G+ + + +E + +PN +T L+ G L G K E +++ L
Sbjct: 441 MLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMK-QEINKVVSLAM 499
Query: 384 EKFTKNVDTWN 394
+ D WN
Sbjct: 500 STGV-DADLWN 509
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 18/347 (5%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDR-----LAFSIAINKL-SEANYFNGISQYLEEL 101
LLK N ++ E + + H R +++SI IN +E + +LE +
Sbjct: 167 LLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMI 226
Query: 102 K--TRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA-LT 156
PD+ ++ ++ G +A + + A F++M ++ + + +N L+ L+
Sbjct: 227 DRGIPPDVV-----TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLS 281
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
I K +KEV ++ E G+KPD TY ++ C++ A M RK IKP
Sbjct: 282 IGK-WKEVVQMLEEM-SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S++G L+ G+ + +++ L +M G+ ++N+ + K +A + ++
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 399
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M G+ PN V Y I CK G ++A+ + M N G++PN V+ ++VY +C
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+E A E + +G PN +L+ L +V E + LI L++
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 12/311 (3%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEM-DEHKLR--HSVGAFNA 150
Q + EL PD +++I+L G N E A+ M D+H R +V +++
Sbjct: 150 QRMPELGCMPDTV-----SYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ + +F+E GI PD+ TY VI C++ A + +M
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDR-GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 263
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
KPN ++ L+ G+ K+++V ++L+ M G+K Y ++ LCK +C EA
Sbjct: 264 GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ D M+ KG+KP TY I+G+ G E F +M +GLSP+ ++
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK-ELIGLVKEKFTKN 389
K G + A+ + G PN +L+ L +V +A+ + ++ E T N
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443
Query: 390 VDTWNEIEAGL 400
+ +N + GL
Sbjct: 444 IVVFNSLVYGL 454
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G+ P++ Y +I A C+ A +M + + PN F +LV G +K+
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 460
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E +++ M G+ +N I +LC + + E + L+D M G++P++ +Y+
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+C G +EA+K + M + GLSP Y T+++ C + A +E + KG
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 580
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
P T +++ GL + SEAKEL + ++ ++ T+N I GL
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 629
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 3/272 (1%)
Query: 118 ILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++YG + E A EM + + + FN L+ L E +R+ I+ +
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL-IDLMEHV 508
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD +Y +I +C + + A + M + P ++ L+ G+ + +D
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R G+ GV YN +H L + ++ +EAK L M++ G K + TY+ + G
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK +EA K ++ + + GL N + M+ + KGG E A+ A G VPN
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
T + + L + E L +++ T
Sbjct: 689 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 720
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M + A+ F +M +H L +V + AL+ AL + + F + G+ P
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE-GVTP 442
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ +N ++ C A ++ EM + I PNA F L+ + + +++
Sbjct: 443 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 502
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ME G++ Y I C + EA+ + D M+S G+ P VTY+ ++G+C
Sbjct: 503 DLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
++A +R M G++P Y T+++ + + + A I G + T
Sbjct: 563 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 622
Query: 360 KSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTW 393
++ GL ++ V EA K L + N+ T+
Sbjct: 623 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 1/255 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R M+ +R ++ L+ + E ++VF + + G+ P TYN ++
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVF-DGMVSIGLSPTEVTYNTLLHG 558
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C +S AY + EM RK + P ++ ++ G ++ +++ + ++ M G K
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN+ ++ LCK EA + + SKG++ N +T++ I K G E+A +
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ +GL PN Y + + + G E G PN + +LV L
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 738
Query: 371 KVSEAKELIGLVKEK 385
+S A + + E+
Sbjct: 739 DISRAGAYLSKLDER 753
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 108/278 (38%), Gaps = 35/278 (12%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ F E+ H SV AFN LL A++ A+ + F NR
Sbjct: 31 DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHF-------------NR 77
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ E SD + PN ++ L+ F + E ++ + G
Sbjct: 78 MVR---ECSDK--------------VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTG 120
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEA-KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ N + LC ++ EA LL M G P++V+Y+ + G C + EEA
Sbjct: 121 WRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEA 180
Query: 306 KKFYRIMSNSG---LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ +M++ PN Y ++ G + E I +G P+ T ++
Sbjct: 181 LELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTV 240
Query: 363 VTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+ GL A A+ + ++ F N T+N + G
Sbjct: 241 IDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHG 278
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 5/287 (1%)
Query: 116 SIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
S++L G N + AV F+EM + L V +N L+ A +E +F K
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+KP ++TYN ++ +C+ A + +EM + KPN ++ L+ G+ ++ ++
Sbjct: 430 A-GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFD 488
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ +L M++ G+ YNV I+ +C + + E +L +S+G P +TY+ I
Sbjct: 489 NAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSII 548
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GF K G A Y+ M GL PN Y + + C+ G + AL + +G
Sbjct: 549 NGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQ 608
Query: 354 PNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAG 399
P+ +L+ G +S A + L+ L+K+ N +N + G
Sbjct: 609 PDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++A EM ++ + + +N L+ + + EV + F + G P + TYN
Sbjct: 488 DNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF-MSEGFIPTMMTYNS 546
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ SA+++ +M K + PN ++ + + G+ + + K+L + R G
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ + YN I+ C+ + A LL +L G+ PN+V Y+ I G+ +E
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
KFY M G+ ++S Y T++ K G+ AL E +AKG++P+ T +L GL
Sbjct: 667 KFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726
Query: 367 AGASKVSEAKELI 379
+ + AK+L+
Sbjct: 727 CRSGDIDGAKKLL 739
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 148/352 (42%), Gaps = 18/352 (5%)
Query: 56 EKILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR--PDL--Q 108
+K E+CR L P + S+ + L + EE+ PD+
Sbjct: 349 QKAYELCRQMTGQGLLPST----FELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTY 404
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
N H H QA+ A+ F M + ++ S+ +N+LL+ E +++
Sbjct: 405 NNLIHWHC-----QAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E P G KP++ TY +++ + D +AY++L EM + + N ++ L+ G
Sbjct: 460 SEMPME-GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
++ +V+ +L+ G + YN I+ K A + +M KG+ PN +T
Sbjct: 519 VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ FI G+C+ G + A K + GL P+ Y ++ C+ G+ AL +
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
G PN SL+TG + + E + ++K + T+ + G
Sbjct: 639 KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 21/253 (8%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALL----------LALTIAKDYKEVKRVFIEF 171
+A M A +++M E L ++ + + + +AL + D V+R
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLND---VRR----- 604
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G++PD+ YN +I FC+ + S A +L + + + PN + +L+ G+
Sbjct: 605 ---RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNM 661
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++V+K + M + G+ + S Y I K A A L EM++KG P++ T++
Sbjct: 662 MKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTA 721
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+G C+ G+ + AKK M + PN +Y ++ + + A E + G
Sbjct: 722 LTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMG 781
Query: 352 WVPNFTTMKSLVT 364
P+ TT LV+
Sbjct: 782 IQPDDTTYDILVS 794
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TY I +C + S A +L ++ R+ ++P+ ++ AL+ GF +E
Sbjct: 571 GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L ++ + G+ +YN I L E + M+ G+ ++ TY+ I G
Sbjct: 631 LQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F KDGN A + Y M G P++ + + + +C+ GD + A +E PN
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPN 750
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
L+ G K+ EA L
Sbjct: 751 VFIYNMLINGYLRDCKLQEAFRL 773
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 12/303 (3%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ ++K+R DL +I + + + A+ F EM R F+AL+ A
Sbjct: 154 VPDIKSRTDL---------LIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+++ R+F E P I PD Y I A C+ D A +L EM
Sbjct: 205 EGMHEDAVRLFDEMPGAE-IDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ +V K + E+ +V M G K V + + C ++ A L E
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L G+ P V Y I G + G ++A + R M+ GL P++ ++ + +
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
+ A+ +E +A +P+ T +L+ A K+ EA L +K+ K +++T+N +
Sbjct: 384 KDAVCLFEE-MADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSL 442
Query: 397 EAG 399
G
Sbjct: 443 LMG 445
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ + ++ S + A ++ EM + + +A F AL++ KE +ED
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + +Y + I +LCKL A +L EM G TY +
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G EEA + M ++G + V T++ C + AL KE++ G VP
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
L+ G +A EL
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYEL 354
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 77 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILEC-G 135
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ SF L+ G+ + ++
Sbjct: 136 YPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 195
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 196 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 255
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 256 CKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDK 315
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
+ +L+ G + A E
Sbjct: 316 ISYTTLIDGCCKEGDLETAFE 336
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 159 ALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLI 217
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + +V + M +
Sbjct: 218 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLS 277
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A+ L+DEM KG+KP+ ++Y+ I G CK+G+ E
Sbjct: 278 PDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEH 337
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 338 RKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCK 397
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD T KE G VP+ T L+ G
Sbjct: 398 KGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ D + VF K +G++P + ++N ++ +
Sbjct: 128 YKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITK-WGLRPSVVSFNTLMNGYI 186
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
GL P+ Y T++ CK GD ETA K I + + +L++GL +
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTWN 394
+A+++ +GL + +F K D W
Sbjct: 367 IDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWT 403
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 90/229 (39%), Gaps = 18/229 (7%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-FGALV--A 224
++ FP + L +Y +I C A +++ + + K +AS+ F A++
Sbjct: 4 WLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQ 63
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAE 269
G + + Y + +E ++ + Y + + L KL+
Sbjct: 64 GTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKL 123
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
E+L G + ++ ++ FCK+G+ A + ++ GL P+ + T++
Sbjct: 124 VWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMN 183
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ GD + A G P+ T L+ GL SK+ +A EL
Sbjct: 184 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANEL 232
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A + M + +N L L A E ++ E + + P
Sbjct: 289 YARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSP 348
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN ++ A + SS A ++L EM K +K + + +V G +E + E+ L
Sbjct: 349 DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MM G+ V YN I + CK A+A L+DEM+ G+K ++ T + +Y CK+
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+EEA++ R G P+ Y T++ K E AL E I + P+ +T
Sbjct: 469 KRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTY 528
Query: 360 KSLVTGLAGASKVSEA----KEL--IGLVKEKFTKNV 390
+L+ GL+ K++EA EL +GLV + T N+
Sbjct: 529 NTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 10/295 (3%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
LEE R ++ E +I Y +A A EM L+ N
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL L K Y+E + + + P G PD +Y V+ A+ + A + EM ++
Sbjct: 461 LLYNLCKEKRYEEAEEL-LRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR 519
Query: 211 SIKPNASSFGALVAGFYKEEKY-EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+ P+ S++ L+ G K E ++K+ ++ME G+ + YN+ IH+ CK +
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME-MGLVPDDTTYNIIIHAYCKEGDLEK 578
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A ++M+ KP+ VT + + G C G E+A K + G + Y T++
Sbjct: 579 AFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQ 638
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+CK D +TAL F + +G P+ T L++ L+ A + EA++++ + E
Sbjct: 639 ALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 4/274 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE-VKRVFIEFPKTYGIKPDLDTYNRV 187
A+ +EM E ++ S+ N ++ L +E + R +E G+ PD+ TYN +
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR--LEMMTEEGLTPDVITYNTL 426
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A C++ + + A+ ++ EM R +K + + L+ KE++YE+ ++L+ + G
Sbjct: 427 IDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGF 486
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
Y + + K K A L DEM+ + + P+ TY+ I G G EA
Sbjct: 487 VPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAID 546
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ GL P+ + Y +++ CK GD E A F + + + P+ T +L+ GL
Sbjct: 547 KLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLC 606
Query: 368 GASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ +A +L EK K +V T+N + L
Sbjct: 607 LYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G+ PD TYN ++ A C A ++LA M ++ I P +++ LV+ + + +
Sbjct: 238 FGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQ 297
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLC-------------------------------- 262
V++ M +G + + YNV LC
Sbjct: 298 ATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLV 357
Query: 263 ----KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
K ++ ++A LL+EM KG+K + VT++ + G C++G EEA +M+ GL+
Sbjct: 358 DACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLT 417
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y T++ CK G+ A E + G + T+ +L+ L + EA+EL
Sbjct: 418 PDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 477
Query: 379 I 379
+
Sbjct: 478 L 478
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ + EM + KL S+ +N L+ L+ E E + G+ PD TYN
Sbjct: 507 EPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME-MGLVPDDTTYNI 565
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I A+C+ D A+ +M S KP+ + L+ G + E K+ + G
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K V YN I +LCK A +M +G++P+ TY+ + + G EA+
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQ 685
Query: 307 KFYRIMSNSG 316
K ++ SG
Sbjct: 686 KMLHKLNESG 695
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ T+N ++ C + A S L++M + P+A ++ L+ ++ +
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L M++ G+ + YN + + +L +A +++ M + G +P+ TY+ G
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
Query: 297 CKDGNFEEAKKFYRIMSNSGL-SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+ G +EA K M G+ SP+ Y T+V K AL +E KG +
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384
Query: 356 FTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEI 396
T +V GL ++ EA L + +E T +V T+N +
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTL 426
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 50/254 (19%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
AI+KL+E L E+ PD H+ Y + E A + +M E+
Sbjct: 544 AIDKLNE----------LMEMGLVPDDTTYNIIIHA---YCKEGDLEKAFQFHNKMVENS 590
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+ V N L+ L + ++ ++F + + G K D+ TYN +I+A C+ +D +A
Sbjct: 591 FKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK-GKKVDVITYNTLIQALCKDNDVDTA 649
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG----------MKSG 250
A+M+ + ++P+ ++ L++ + + + K+L + G +KS
Sbjct: 650 LRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSS 709
Query: 251 VSM--------------------------YNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
V YN I LC + EAKA+LDEM+ KGM
Sbjct: 710 VEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSV 769
Query: 285 NSVTYSHFIYGFCK 298
++ TY + G K
Sbjct: 770 DNSTYITLMEGLIK 783
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+++ + PN T++ ++ C G +A M GLSP++ Y T++ C+ G
Sbjct: 200 LIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGM 259
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNE 395
A +G VP T +LV+ A + +A +++ + F ++ T+N
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319
Query: 396 IEAGLPQ 402
+ AGL Q
Sbjct: 320 LAAGLCQ 326
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ SF L+ G+ + ++
Sbjct: 132 YPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +C+ GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 312 ITYTTLIDGXCKEGDLETAFE 332
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LC+ +A+ L+DEM KG+KP+ +TY+ I G CK+G+ E A +
Sbjct: 274 PDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEH 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ G Y A +E ++ G P+ T ++
Sbjct: 334 RKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCK 393
Query: 369 ASKVSEAKELI 379
V +L+
Sbjct: 394 KGDVWTGSKLL 404
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + ++N ++ +
Sbjct: 124 YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITK-WGLRPSVVSFNTLMNGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 183 RLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 242
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG C+ G+ ++A+ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM 302
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ETA K I + + +L++GL +
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRY 362
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTWN 394
+A+++ +GL + +F K D W
Sbjct: 363 LDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWT 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 18/225 (8%)
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-FGALVA--GFYK 228
P + LD+Y +I C S A S++ + + K +AS+ F A++ G +
Sbjct: 4 PTNSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQR 63
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAEAKAL 273
+ Y + +E ++ + Y + + L KL+
Sbjct: 64 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+E+L G + ++ ++ FCKDG+ A+ + ++ GL P+ + T++ +
Sbjct: 124 YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 183
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
GD + A G P+ T L+ GL SK+ +A EL
Sbjct: 184 LGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIKPD+ Y +I + C++ +A S+ +M+ I+P+ + +LV G ++ D
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L+ M + +K V +N I + K K +AK L +EM+ + PN TY+ I G
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +G +EA++ + +M G P+ Y +++ CK E A+ E KG N
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
T +L+ G K + A+E+ G +V N+ T+N
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYN 390
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N E A+ +M E ++ V + ++ +L +F + + YGI+PD+
Sbjct: 154 GNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM-ENYGIRPDVV 212
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
Y ++ C S A +L M ++ IKP+ +F AL+ F KE K D ++ M
Sbjct: 213 MYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ + + Y I+ LC + EA+ + M +KG P+ V Y+ I GFCK
Sbjct: 273 IQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 332
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E+A K + MS GL+ N+ Y T++ G A +++G PN T L
Sbjct: 333 EDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVL 392
Query: 363 VTGLAGASKVSEAKELIGLVKEK----FTKNVDTWNEIEAGL 400
+ L KV++A + ++++ N+ T+N + GL
Sbjct: 393 LHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGL 434
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F M E + S+ F LL + K + V + + + G+ DL T N ++
Sbjct: 55 ALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINL-CKHLQIMGVSNDLYTCNLLM 113
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+SS A S L ++ + +P+ +F +L+ GF + E+ ++ M G+K
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIK 173
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +Y I SLCK A +L ++M + G++P+ V Y+ + G C G + +A
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M + P+ + ++ K G A E I PN T SL+ GL
Sbjct: 234 LRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCM 293
Query: 369 ASKVSEAKELIGLVKEK 385
++ EA+++ L++ K
Sbjct: 294 EGRLDEARQMFYLMETK 310
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T+ +I FC + A S++ +M IKP+ + ++ K ++
Sbjct: 136 GFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNA 195
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ME YG++ V MY ++ LC + +A LL M+ + +KP+ +T++ I
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K+G +AK+ Y M ++PN Y +++ +C G + A KG P+
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
SL+ G KV +A ++ + +K T N T+ + G
Sbjct: 316 VVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQG 360
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 4/255 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EM + + ++ + +L+ L + E +++F +T G PD+ Y +I FC
Sbjct: 269 YNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY-LMETKGCFPDVVAYTSLINGFC 327
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A I EM +K + N ++ L+ GF K +V M G+ +
Sbjct: 328 KCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIR 387
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSK---GMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YNV +H LC K +A + ++M + G+ PN TY+ ++G C +G E+A +
Sbjct: 388 TYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVF 447
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M + Y ++ MCK G + AL +KG PN T ++++GL
Sbjct: 448 GDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFRE 507
Query: 370 SKVSEAKELIGLVKE 384
+ EA L +KE
Sbjct: 508 GLMLEAHVLFRKMKE 522
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ S + A + + M P+ F L+ K +K++ V + + ++
Sbjct: 39 YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + + N+ ++ C+ + A + L +++ G +P+ T++ I GFC E
Sbjct: 99 IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA M G+ P+ +Y T++ +CK G + AL + G P+ SLV
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218
Query: 364 TGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
GL + + +A L+ G++K K +V T+N +
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 35/337 (10%)
Query: 11 LNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLL----KSESNPEKILEICRAAA 66
L+LF+Q + + ++ + L + + R A LL K + P+ I A
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255
Query: 67 LTPESHL--------DRLAFSIAINKLSEANYFNGISQ-----------YLEELK-TRPD 106
E L + + SIA N + + NG+ YL E K PD
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315
Query: 107 LQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
+ A++ ++ G + E A++ F EM + L + + L+ +
Sbjct: 316 VV-----AYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK---PNASSFGA 221
+ VF + G+ P++ TYN ++ C + + A I +M ++ I PN ++
Sbjct: 371 QEVFGHMV-SRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNV 429
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G K E V M++ M G+ Y + I +CK K +A L + SKG
Sbjct: 430 LLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKG 489
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+KPN VTY+ I G ++G EA +R M G+S
Sbjct: 490 VKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP++ TYN ++ C+ A + EM + + P+ S+ +L+ GF K+E+ +
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M G++ + +NV I +LCK K EAK LL M+ G+ P+ VTY+ I GFC
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G+ A++ + M + G P+ Y ++ K E A+ E + G PN
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVK 383
T SL+ G+ A KV +AK+L ++K
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMK 417
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 8/279 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
HA+ F M S+ +FN LL L K Y +V ++ + + G+ D T N +
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNIL 110
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ C + ++ A + R+ PN ++ L+ G E + + ++ M++ G
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK------GMKPNSVTYSHFIYGFCKDGN 301
V Y I LC A L EML+ KPN +TY+ + G CK G
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EAK+ + M G+ P+ Y ++++ C G +E + E + +G P+ T
Sbjct: 231 EDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNV 290
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L+ L KV EAK+L+G++ E ++ T+N + G
Sbjct: 291 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 14/331 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++I ++ L + + Q EE+KT+ P + + H G+ E + R
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKW---EESKRL 272
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR---VFIEFPKTYGIKPDLDTYNRVIK 189
EM + L+ + FN L+ L E K+ V IE GI PDL TYN +I+
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE----SGIVPDLVTYNSLIE 328
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
FC D +SA + M K +P+ S+ L+ G+ K K E+ K+ M G +
Sbjct: 329 GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 388
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V Y+ + + K +AK L M + G+ NS TY F+ G CK+ EA K +
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF 448
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ +S ++ +CK G ETA ++ +G PN T ++ G
Sbjct: 449 TELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 508
Query: 370 SKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+V +A LI ++ T ++ T+N + G
Sbjct: 509 GQVDKANVLIQKMEANGCTPDIITYNTLMRG 539
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
S+ FN +L A+ + Y V ++ IE + I PDL T N ++ FC SSA
Sbjct: 9 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 68
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S L +M + I+P+ + +LV GF +D V ME+ G+K V + + I +L
Sbjct: 69 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 128
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK R A +L M +G+ PN VTYS I G CK G +A++ M + ++PN
Sbjct: 129 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 188
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+ ++ K G K I PN T SL+ GL ++V EA +++ L
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248
Query: 382 VKEK-FTKNVDTWNEIEAG 399
+ K T NV T++ + G
Sbjct: 249 MISKGCTPNVVTYSTLANG 267
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI P++ TY+ +I C+S + A L EMD K I PN +F AL+ + K K
Sbjct: 145 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 204
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V+ V +MM + + V Y+ I+ LC + EA +LD M+SKG PN VTYS
Sbjct: 205 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 264
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
GF K ++ K M G++ N+ T++ + G + ALG + G
Sbjct: 265 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 324
Query: 353 VPNFTTMKSLVTGLAGASKVSEA 375
+PN + ++ GL +V +A
Sbjct: 325 IPNIRSYNIVLAGLFANGEVEKA 347
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIK D+ +I C++ A +L M + I PN ++ +L+ G K + D
Sbjct: 113 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 172
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L M+ + V ++ I + K K ++ ++ M+ + PN TYS IYG
Sbjct: 173 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 232
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +EA K +M + G +PN Y T+ K + + + +G N
Sbjct: 233 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 292
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +L+ G A K+ A + G + N+ ++N + AGL
Sbjct: 293 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 338
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 36/297 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +I I+ L + + L+ +K R N ++ I ++ A R
Sbjct: 117 DVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 176
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EMD K+ +V F+AL+ A +V V+ + I P++ TY+ +I C
Sbjct: 177 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVY-KMMIQMSIDPNVFTYSSLIYGLCM 235
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L M K PN ++ L GF+K + +D K+L M + G+ +
Sbjct: 236 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 295
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS--------------------------- 286
N I + K A + M S G+ PN
Sbjct: 296 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 355
Query: 287 --------VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+TY+ I+G CK +EA + + + P+ Y M+ + + G
Sbjct: 356 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 412
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 3/198 (1%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++YG N + A++ M +V ++ L + + ++ + P
Sbjct: 226 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 285
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ + + N +IK + ++ A + M + PN S+ ++AG + +
Sbjct: 286 QR-GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 344
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + M++ + Y + IH +CK EA L ++ K ++P+ Y+
Sbjct: 345 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 404
Query: 293 IYGFCKDGNFEEAKKFYR 310
I + G EA R
Sbjct: 405 IAELNRAGMRTEADALNR 422
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 1/252 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M ++ +V FN LL +E ++ E T GI P++ TYN ++ +C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYC 344
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A ++L M R P+ +F +L+ G+ ++ +D KV + + + G+ +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + C+ K A+ L EM+S G+ P+ +TY + G C +G E+A + + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S + +Y T++ MCKGG E A KG PN T +++GL +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 373 SEAKELIGLVKE 384
SEA L+ ++E
Sbjct: 525 SEANILLRKMEE 536
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 138/298 (46%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PD+ + I G T A+ ++M+E ++ V ++ ++ +L
Sbjct: 190 QPDVVTYNSIVNGICRSGD---TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GIK + TYN +++ C++ + +L +M + I PN +F L+
Sbjct: 247 AISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K ++ N++ + M G+ + YN + C + +EA +LD M+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VT++ I G+C ++ K +R +S GL N+ Y +V C+ G + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E ++ G +P+ T L+ GL K+ +A E+ L K K + + I G+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ L + E V ++ G +PD+ TYN ++ C S D+S A +L +
Sbjct: 160 TFNTLIKGLFLEGKVSEAV-VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ +++K + ++ ++ ++ + + + ME G+KS V YN + LCK K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+ LL +M+S+ + PN +T++ + F K+G +EA + Y+ M G+SPN Y T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
++ C A + P+ T SL+ G +V + ++ + K
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 386 FTKNVDTWNEIEAGLPQ 402
N T++ + G Q
Sbjct: 399 LVANAVTYSILVQGFCQ 415
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDT 183
+ A+ F+EM + S+ F+ A+ K + V ++F K GI ++ T
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV----LDFCKQLELNGIAHNIYT 125
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I FC + AYS+L ++ + +P+ ++F L+ G + E K + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN ++ +C+ + A LL +M + +K + TYS I C+DG +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A ++ M G+ + Y ++V +CK G + K+ +++ VPN T L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
K+ EA EL ++ + N+ T+N + G
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
KL EAN + +E+ TR N + + Y N A M +K
Sbjct: 313 KLQEAN------ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ F +L+ + K + +VF K G+ + TY+ +++ FC+S A +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM + P+ ++G L+ G K E ++ + +++ M G+ MY I +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A L + KG+KPN +TY+ I G CK G+ EA R M G +PN
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
Y T++ + GD + +E + G+ + +++K ++ L A K
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+N +IK S A ++ M +P+ ++ ++V G +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME +K+ V Y+ I SLC+ A +L EM +KG+K + VTY+ + G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + + M + + PN + ++ K G + A KE I +G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T +L+ G +++SEA ++ L V+ K + ++ T+ + G
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ I+ G M T A+ ++M+E + +V +N ++ L + + +FIE
Sbjct: 219 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIE 278
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ I PD+ TYN +I FC S S A +L EM + I P+ +F AL+ F KE
Sbjct: 279 MQEKE-IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEG 337
Query: 231 KYEDVNKVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
K+ + ++ +M+ R + S V+ Y+ I CK + A+ + +KG P+ +T+
Sbjct: 338 KFFEAEELYDEMLPRSIIPSTVT-YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITF 396
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ I G+C+ ++ K M+ +GL N+ Y T+++ C+ GD A +E I+
Sbjct: 397 NTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMIS 456
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G PN T +L+ GL K+ +A E+
Sbjct: 457 SGVCPNVVTCNTLLDGLCDNGKLKDALEM 485
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P++ YN +I + S A+++ EM K I P+ ++ ++ GF ++ D
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++LQ M + V ++ I++ K K EA+ L DEML + + P++VTYS I GF
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK + A+ + + G SP+ + T++ C+ + + E G V N
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G ++ A++L+ ++ NV T N + GL
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM E ++ + +N ++ I+ + + +++ E + I PD+ T++ +I AF
Sbjct: 276 FIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK-INPDVVTFSALINAFV 334
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + EM +SI P+ ++ +++ GF K+ + + + + G +
Sbjct: 335 KEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDII 394
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I C+ ++ + LL EM G+ N++TY+ I+GFC+ G+ A+ + M
Sbjct: 395 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 454
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------------GWVPNFTTMK 360
+SG+ PN T++ +C G + AL K ++ K G P+ T
Sbjct: 455 ISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDIDASRPFNGVEPDVQTYN 513
Query: 361 SLVTGLAGASKVSEAKEL 378
L+ GL K EA+EL
Sbjct: 514 ILICGLINEGKFLEAEEL 531
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 12/271 (4%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + ++ EM E L + + L+ D + + E + G+ P
Sbjct: 403 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS-GVCP 461
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDR-----------KSIKPNASSFGALVAGFYK 228
++ T N ++ C++ A + M + ++P+ ++ L+ G
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K+ + ++ + M G+ Y+ I LCK + EA + D M SK P+ VT
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVT 581
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK G ++ + + M G+ ++ Y T++Y K + + AL +E I
Sbjct: 582 FNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMI 641
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G P+ T+++++TGL ++ A ++
Sbjct: 642 SSGVYPDTITIRNMLTGLWSKEELERAVAML 672
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ TF ++ + +V FN LL L + E +F + KP++ T+ ++
Sbjct: 135 ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM-----CKPNVVTFTTLM 189
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK-EEKYEDVNKVLQMMERYGM 247
C A ++L M ++PN ++G +V G K + +N + +M E +
Sbjct: 190 NGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHI 249
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V +YN I L K + ++A L EM K + P+ VTY+ I GFC G + +A++
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQ 309
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M ++P+ + ++ K G + A E + + +P+ T S++ G
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369
Query: 368 GASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+++ A+ + L K + ++ T+N + AG
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAG 402
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 79/213 (37%), Gaps = 6/213 (2%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F E A + M R P+ F L+ + + + V + + ME M
Sbjct: 55 GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ + + C K A + ++ G P VT++ ++G C + EA +
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M PN + T++ +C+ G A+ + G PN T ++V G+
Sbjct: 175 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230
Query: 370 SKVSEAKELIGLVKE--KFTKNVDTWNEIEAGL 400
A L+ ++E NV +N I GL
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGL 263
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAF 148
FNG+ PD+Q ++I++ G N + A ++EM + +
Sbjct: 502 FNGV---------EPDVQT-----YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
++++ L E ++F + + PD+ T+N +I +C++ + EM
Sbjct: 548 SSMIDGLCKQSRLDEATQMF-DSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMG 606
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++ I +A ++ L+ GF K + + + Q M + SGV + I ++
Sbjct: 607 QRGIVADAITYITLIYGFRKVDNIDGALDIFQEM----ISSGVYPDTITIRNM 655
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A+ +M+ K+ +V ++ ++ +L + + +F E + G++P++ TY+
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYS 292
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C S A +L++M + I PN +F AL+ F K+ K K+ + M +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + Y+ I+ C L + EAK +L+ M+ K PN VTY+ I GFCK ++
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R MS GL N+ Y T+++ + D + A K+ ++ G PN T L+ G
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L K+++A + L + ++ T+N + G+
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+ +I + +S A +++ M ++ +P+ ++GA+V G K +
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V +Y+ I SLCK R +A L EM +KG++PN +TYS I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A +E I + PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
T SL+ G ++ EAK+++ L +++ NV T+N + G
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ F+ LL A+ + V F E + GI +L TYN
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYNI 118
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ GF + D ++ M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K + IH L K +EA AL+D M+ +G +P+ VTY + G CK G+ + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + N +Y T++ +CK + AL E KG PN T SL++ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K N+ T++ +
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E RP++ + YG+ + A R +M E K+ ++ F+AL+ A
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWS---DASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ ++++ E K I P++ TY+ +I FC A +L M RK PN
Sbjct: 336 KGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ GF K ++ + ++ + M + G+ Y IH + R C A+ + +M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+S G+ PN +TY+ + G CK+G +A + + S + P+ Y M+ MCK G +
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 338 E 338
+
Sbjct: 515 K 515
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T N ++ FC + S A +++ +M KP+ +F L+ G + K +
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y ++ LCK A LL++M + ++ N V YS I
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A + M N G+ PN Y +++ +C G + A + I + PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ +A++L ++K N+ T++ + G
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y V++ + A + M + P+ F L++ K K++ V + ME
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN+ I+ C+ + + A ALL +M+ G +P+ VT + + GFC
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G P+ T ++V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 364 TGLAGASKVSEAKELI 379
GL A L+
Sbjct: 226 NGLCKRGDTDLALNLL 241
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S IN + Q LE + + L N + I + +A + + F+EM
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ L + + L+ A+D + VF + + G+ P++ TYN ++ C++
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKL 479
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ A + + R +++P+ ++ ++ G K K++
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD Y +I ++ A S+ + M K + ++ L+AGF ++++ +
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++LQ M+ G++ V YN + CK A LL +M+ G +P+ +T+ ++G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G +EA + R M SG+ PN+ +Y T++ F+CK GD + A+ E K N
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
TT +L+ GL + +A EL+ ++E+
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREE 557
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY+ ++ A +++ A + E + P+A + +++G + + ED + M
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G K YN+ I C+ ++ EA LL EM G++P+ TY+ + G CK G+F
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ M + G P+ + T+V+ CK G + AL + G PN +L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ L V A EL +KEK NV T+N + GL
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G K D YN +I FC AY +L EM I+P+ ++ L++G K +
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V+++L M G + V + +H CK+ K EA +L M G+ PN+V Y+
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK G+ + A + + M + N + + ++ + E A + +
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 353 VPNFTTMKSLVTGL 366
P++ T+ L+ L
Sbjct: 560 FPDYVTVDVLMEWL 573
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 24/383 (6%)
Query: 33 KTPLTSKDKTRAALT-LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYF 91
+ P S A L+ LL S+PE A+ D AF+ + L+
Sbjct: 93 RVPPPSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDV 152
Query: 92 NGISQYLEELK----TRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKL--RH 143
G+++ ++ RPD+ + I++ G +A A+R M L R
Sbjct: 153 PGMARIYALMQGCASVRPDVVT-----YGILVNGLCKAGRVGDALRVLDGMSRQDLDIRP 207
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIE--FPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
V N ++ L + +E F+E +G P+ TYN +I AFC + S AY
Sbjct: 208 DVVTLNTVVDGLCKSGRVQEA-LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM----KSGVSMYNVR 257
++ +M+ + + N + +V G + + + + E+ + K Y+
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTL 324
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ +L A L E +S+G P+++ Y I G + G E+A M +G
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
++ Y ++ C+ A +E G P+ T +L++G A + E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444
Query: 378 LIG-LVKEKFTKNVDTWNEIEAG 399
L+G ++ + +V T+ + G
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHG 467
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 10/308 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D F+ I+ L + N + ++ ++ + R PD F H + G+ N +
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ L N L+ ++ KE + E +G +PD+ TYN ++
Sbjct: 347 IKIPCPNNAIL-------NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ S A ++ EM R+ +PN ++ LV G K E+ VL M G+
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+YN I +LC+ K A LL EM +KG KP+ TY+ IYG CK +EA + +
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G N+ Y T+++ + + G ++ AL + + +G + T L+
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579
Query: 371 KVSEAKEL 378
+ + EL
Sbjct: 580 NIEKGLEL 587
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 8/327 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + INKL F I + L ++K + E + YG+A A+R +M
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEV-KRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
L L+L + + + +V VF + + G+ P + T+ V+KA C +
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM-LSKGVSPTVFTFGIVMKALCMFN 232
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ SA S+L +M + PN+ + L+ ++ + + K+L+ M G V +N
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LCK+ K +A L+D ML +G P+++TY ++G C+ G EA+K +
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-- 350
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMKSLVTGLAGASKVSE 374
PN+++ T++ G + A F E++ G+ P+ T L+ GL +S
Sbjct: 351 --CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408
Query: 375 AKELIG-LVKEKFTKNVDTWNEIEAGL 400
A++L+ + + NV T+ + GL
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGL 435
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 12/312 (3%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
+L EA F +++ + +PD+ H + G + V EM
Sbjct: 369 QLKEAQSF--LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV---NEMSRRGCEP 423
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V + L+ L A +E V E G+ + YN +I A C A ++
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEM-SARGLTINSVIYNCLICALCRKEKVHVALNL 482
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L+EM K KP+ ++ +L+ G K ++ ++ ++ M G + YN IH+L +
Sbjct: 483 LSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+A L+++ML +G + +TY+ I FCK GN E+ + Y M GL ++
Sbjct: 543 RGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI---- 379
M+ +CK G + A F +++I +G+VP+ T S++ GL ++ EA L
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662
Query: 380 --GLVKEKFTKN 389
G+ + FT N
Sbjct: 663 VEGVRPDAFTYN 674
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 1/295 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++I +N L +A L E+ R N + I + A+ E
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +N+L+ L E R+F + ++ TYN +I A
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV-TYNTLIHALLRRG 544
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +++ +M + + ++ L+ F K E ++ + M G+ + N
Sbjct: 545 AFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I+ LCK+ K A L + +++G P+ VTY+ + G CK G +EA + +
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVE 664
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
G+ P++ Y T + + CK G A F I G+VP+ T LV L S
Sbjct: 665 GVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQS 719
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 8/238 (3%)
Query: 103 TRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+PDL F +S+I YG + + + A R F M + +N L+ AL
Sbjct: 491 CKPDL----FTYNSLI-YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+++ + + G D TYN +IKAFC+ + + +M + + S
Sbjct: 546 FQKALTLVNDM-LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ G K K ++ + L+ G + YN ++ LCK+ + EA L D + +
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVE 664
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G++P++ TY+ FI CK+G +A F+ +G P++ + +VY + K + E
Sbjct: 665 GVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 38/317 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK-DYKEVKRVFIEFPKTY 175
I YG++ + E A+ F M E+ LR ++ +NA++ A ++K+V + F E +
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN- 333
Query: 176 GIKPDLDT-----------------------------------YNRVIKAFCESSDSSSA 200
G++PD T YN ++ A C+ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ ILA+M K I PN S+ ++ GF K ++++ + M G+ YN +
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
K+ + EA +L EM S G+K + VTY+ + G+ K G ++E KK + M + PN
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y T++ KGG Y+ A+ +E + G + +L+ L V A LI
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 381 -LVKEKFTKNVDTWNEI 396
+ KE + NV T+N I
Sbjct: 574 EMTKEGISPNVVTYNSI 590
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 3/274 (1%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFN 149
F ++++ +E++ R +Q +R +S++ + + + E A F EM ++ V ++N
Sbjct: 320 FKQVAKFFDEMQ-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 150 ALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
LL A+ + + P I P++ +Y+ VI F ++ A ++ EM
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
I + S+ L++ + K + E+ +L+ M G+K V YN + K K E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
K + EM + + PN +TYS I G+ K G ++EA + +R ++GL + +Y ++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+CK G +A+ E +G PN T S++
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++ ++ + + + + L ++ + + N ++ I + +A + A+ F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + ++N LL T +E + E + GIK D+ TYN ++ + +
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM-ASVGIKKDVVTYNALLGGYGK 491
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ EM R+ + PN ++ L+ G+ K Y++ ++ + + G+++ V +
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I +LCK A +L+DEM +G+ PN VTY+ I F + + + + S
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----S 607
Query: 314 NSGLSPNSS 322
N G P SS
Sbjct: 608 NGGSLPFSS 616
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK-LRKCAEAKALLDE 276
+F AL++ + + +E+ V M+ YG++ + YN I + K + + DE
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M G++P+ +T++ + + G +E A+ + M+N + + Y T++ +CKGG
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ A + K +PN + +++ G A A + EA L G
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+ + + F EM + ++ ++ L+ + YKE +F EF K+ G++
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRA 547
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE------ 233
D+ Y+ +I A C++ SA S++ EM ++ I PN ++ +++ F + +
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 234 ------------------DVNKVLQMMERYGMKSGVSMYNVRIHSLCK--LRKCAEAKAL 273
+ N+V+Q+ + +S N R C+ +++ + +
Sbjct: 608 NGGSLPFSSSALSALTETEGNRVIQLFGQLTTES-----NNRTTKDCEEGMQELSCILEV 662
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+M +KPN VT+S + + +FE+A
Sbjct: 663 FRKMHQLEIKPNVVTFSAILNACSRCNSFEDA 694
>gi|359489475|ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 7/300 (2%)
Query: 34 TPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNG 93
+P+ S + + L+ S+S+P EI A+L P +F I I KL A F+
Sbjct: 40 SPIGSPSRVQ---KLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSL 96
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ L LK+ N + I +YG+AN+ + A++TF M + + N LL
Sbjct: 97 MQDLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQ 156
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L ++Y + YG+ PD +YN ++ AFC + D S AY++ +M ++ +
Sbjct: 157 LLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVA 216
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ S+ L+ G ++ + VN+ + ++E + G + LC EAK
Sbjct: 217 PDVESYRILMQGLCRKSQ---VNRAVDLLEDM-LNKGYVPDATLVSGLCDQGLYDEAKNY 272
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++EMLSKG + + I GFC G EEA + R M G +P++ + ++ +C+
Sbjct: 273 VEEMLSKGFSLHFSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICE 332
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ KEM+ H ++H+ ++ L+ D+ +F + K+ G
Sbjct: 433 INLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKS-G 491
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD YN +++AFC+ + A I M ++ ++P+ +F ++ GF +
Sbjct: 492 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAF 551
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
L +M R G V YN IH L + + +A ++LD+M G+ PN TY+ + G+
Sbjct: 552 DTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGY 611
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + SGL + +Y T++ CK G ++AL +E + N
Sbjct: 612 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 671
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
L+ G A V EA +L+ +KE
Sbjct: 672 FIYNILIDGWARRGDVWEAADLLKQMKE 699
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I+ + N +E KT+ D N +++ I + Q+ + A +E
Sbjct: 322 VTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE 381
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + +++++ T+ +D K+ VF E K G KP + +Y +I + +
Sbjct: 382 MEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVF-ERLKECGFKPTIISYGCLINLYVKVG 440
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +I EM+ IK N ++ L+ GF + + + + M + G++ ++YN
Sbjct: 441 KVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYN 500
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + + CK+ A + + M + M+P++ T+ I GF G+ + A +M S
Sbjct: 501 LLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRS 560
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G +P Y +++ + + E A+ + G PN T ++ G A + + +A
Sbjct: 561 GCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKA 620
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 621 FEYFTKIKE 629
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 6/250 (2%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPD 180
NM + A+R F+ M + +++ S F ++ +A D +KR F ++ + G P
Sbjct: 510 GNM-DRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD---MKRAFDTLDLMRRSGCAPT 565
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN +I A S+L +M I PN ++ ++ G+ +
Sbjct: 566 VMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFT 625
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++ G+K V +Y + + CK + A A+ EM + + N+ Y+ I G+ + G
Sbjct: 626 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 685
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ EA + M G+ PN + + + CK GD + A +E G PN T
Sbjct: 686 DVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFT 745
Query: 361 SLVTGLAGAS 370
+L+ G A S
Sbjct: 746 TLIKGWARVS 755
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 131/320 (40%), Gaps = 37/320 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
++ Y + HA TF+ M + + F +L+ A +A D + +E K+ G
Sbjct: 258 VVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSC-VEEMKSEG 316
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ + TY+ +I + +++D+ SA ++ E K N + ++ + +
Sbjct: 317 IEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAE 376
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP------------ 284
++++ ME G+ + + +Y+ +H ++ + + + + G KP
Sbjct: 377 ELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLY 436
Query: 285 -----------------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
N+ TYS I GF +F A + M SGL P+
Sbjct: 437 VKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDR 496
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++Y +V CK G+ + A+ + + P+ T + ++ G A A + A + + L
Sbjct: 497 AIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDL 556
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
++ V T+N + GL
Sbjct: 557 MRRSGCAPTVMTYNALIHGL 576
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 8/226 (3%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+D++ V F PK P + ++ + + D A + M + I+PNA
Sbjct: 234 EDWQAVVSAFERIPK-----PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFV 288
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F +LV + ++ M+ G++ V Y++ I K A L E
Sbjct: 289 FTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAK 348
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+K N + YS+ I+ C+ GN + A++ R M G+ VY +M++ D +
Sbjct: 349 TKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEK 408
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
L + G+ P + L+ KV +A I + KE
Sbjct: 409 KCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKA---IAISKE 451
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 13/208 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
H ++II+ G A + A F ++ E L+ V + LL A + + V
Sbjct: 602 HTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTRE 661
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F + P+ I YN +I + D A +L +M I PN +F + +
Sbjct: 662 MSFQKIPRNTFI------YNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINA 715
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + V+Q M G+K V + I ++ A +EM S G+KP+
Sbjct: 716 CCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPD 775
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + E + I S
Sbjct: 776 EAAYHCLVTSLLSRATVMEGSTYTGIFS 803
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+ + + + K G+ A+ + M G+ PN+ V+ ++V+ GD AL
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALS 307
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
+E ++G T L++G K ++A+ L KE TK +D N I
Sbjct: 308 CVEEMKSEGIEMTVVTYSILISGYG---KTNDAQSADNLFKEAKTK-LDNLNGI 357
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 19/339 (5%)
Query: 42 TRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
T AA+ LL+S C+ + S +D L +++EA FN SQ + +
Sbjct: 177 TSAAIRLLRSMEQGN-----CQPDVVIYTSIIDSLCKD---RQVTEA--FNLFSQMVGQ- 225
Query: 102 KTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
PD+ ++ +++ N+ E H +M K+ V F+ ++ AL
Sbjct: 226 GISPDI-----FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEG 280
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
E + ++ G++PD+ TY ++ C S+ A + M RK P+ S+
Sbjct: 281 KVTEAHEI-VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 339
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ G+ K K + + + M R YN +H LC + + +A AL EM++
Sbjct: 340 TTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVA 399
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+G P+ VTYS + CK+ + EEA + + S L+P+ VY ++ MC+ G+ E
Sbjct: 400 RGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 459
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A +KG P+ T ++ GL ++EA +L
Sbjct: 460 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+R + M++ + V + +++ +L + E +F + GI PD+ TY
Sbjct: 177 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ-GISPDIFTYT 235
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ A C + ++L +M I P+ F +V KE K + ++++ MM +
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V Y + C + EA + D M+ KG P+ ++Y+ I G+CK ++A
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 355
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M P++ Y T+++ +C G + A+ E +A+G +P+ T L+
Sbjct: 356 MYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 415
Query: 366 LAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
L + EA L+ ++ ++ +N I G+
Sbjct: 416 LCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
FH+ S+ N + A+ +F + S+ F LL ++ K Y V + +
Sbjct: 27 FHSKSL----HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 82
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++G+ P++ T N +I +FC + A+S+LA++ + +P+ ++F L+ G E K
Sbjct: 83 -DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ + M G + V Y I+ LCK+ + A LL M +P+ V Y+
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I CKD EA + M G+SP+ Y ++V+ +C +++ + +
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+P+ ++V L KV+EA E++ ++ ++
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F +M + + + +L+ AL ++K V + + + I PD+ ++ V+
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK-ILPDVVIFSTVV 273
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C+ + A+ I+ M ++ ++P+ ++ L+ G + + ++ KV MM R G
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y I+ CK+ K +A L +EM K P++ TY+ ++G C G ++A
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G P+ Y ++ +CK E A+ K A P+ ++ G+
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A ++ A++L L + +V T+N + GL
Sbjct: 454 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I+ C A + +M + +PN ++G L+ G K
Sbjct: 121 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 180
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ ME+ + V +Y I SLCK R+ EA L +M+ +G+ P+ TY+ ++
Sbjct: 181 IRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHA 240
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C ++ M NS + P+ ++ T+V +CK G A I +G P+
Sbjct: 241 LCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPD 300
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L+ G S++ EA ++ +V++ F +V ++ + G
Sbjct: 301 VVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 2/254 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F L+ L + E +F + G +P++ TY +I C+ ++S+A +L M
Sbjct: 129 FTTLIRGLCVEGKIGEALHLFDKMIDE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 187
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++ + +P+ + +++ K+ + + + M G+ + Y +H+LC L +
Sbjct: 188 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 247
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
LL++M++ + P+ V +S + CK+G EA + +M G+ P+ Y T+
Sbjct: 248 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKF 386
+ C + + A+ + KG+ P+ + +L+ G K+ +A L + ++++
Sbjct: 308 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367
Query: 387 TKNVDTWNEIEAGL 400
+ T+N + GL
Sbjct: 368 IPDTKTYNTLMHGL 381
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ M E AV+ F M V ++ L+ + +F E + I PD
Sbjct: 314 QSEMDE-AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDT 371
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C A ++ EM + P+ ++ L+ K E+ +L+
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E + + +YN+ I +C+ + A+ L + SKG+ P+ TY+ I+G CK G
Sbjct: 432 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA K + M + SP+ Y T+ + + A+ +E +A+G+ + +T
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTL 551
Query: 362 LVTGLA 367
LV L+
Sbjct: 552 LVEMLS 557
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 2/258 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + V + L+ + + E +VF + G PD+ +Y +I +C+
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF-DMMVRKGFAPDVISYTTLINGYCKIH 350
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM RK P+ ++ L+ G + +D + M G + Y+
Sbjct: 351 KIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 410
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + SLCK EA ALL + + + P+ Y+ I G C+ G E A+ + +S+
Sbjct: 411 ILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 470
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y M++ +CK G A E P+ T ++ G ++ A
Sbjct: 471 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530
Query: 376 KELI-GLVKEKFTKNVDT 392
+L+ ++ F+ +V T
Sbjct: 531 IQLLEEMLARGFSADVST 548
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A+ F+EM + +N L+ L ++ +F E G P
Sbjct: 346 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM-VARGQMP 404
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY+ ++ + C++ A ++L ++ ++ P+ + ++ G + + E +
Sbjct: 405 DLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 464
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ V YN+ IH LCK EA L EM P+ TY+ GF ++
Sbjct: 465 SNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 524
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
A + M G S + S +V + G
Sbjct: 525 NETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 7/279 (2%)
Query: 127 EHAVRTFKEM--DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
E A R EM E L V FN++L L + + VF + G +P++ TY
Sbjct: 188 EAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF-KRALERGCRPNVVTY 246
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ +I + + A +LA+M + N ++ +V G K + ED VL+ M
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G YN I K ++ EA LL EML G P+ VTY+ +G C+ G F+E
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV--PNFTTMKSL 362
A + M+ G +PN+ Y ++V +CK G ALG+ E +A+ V P+ +L
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY-FEKMARDEVVAPHVIAYSAL 425
Query: 363 VTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ GL A K+ EA E + +++ +V T++ + GL
Sbjct: 426 IDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
FK E R +V ++ L+ L+ E ++ + + G + + TY+ V+
Sbjct: 230 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE-LGCRANTVTYSTVVDGL 288
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
+ A +L +M P+A ++ L+ GF+K ++ + +L+ M G V
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 348
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y H LC+ + EA +LD M ++G PN++TYS + G CK G EA ++
Sbjct: 349 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408
Query: 312 MS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M+ + ++P+ Y ++ +CK G + A F + I G +P+ T L+ GL A
Sbjct: 409 MARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468
Query: 371 KVSEAKELI-GLVKEKFTKNVDTW 393
++ EL G+ + ++ T+
Sbjct: 469 RIDTGLELFRGMAERGCVPDMVTY 492
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 5/279 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A+ FK+M + + V + AL+ L + KE +F E + G P + TYN
Sbjct: 11 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLF-EEARAKGCHPTVVTYN 69
Query: 186 RVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I C+ +A ++ +M +P ++ L+ G ++ + + K+L+ M
Sbjct: 70 TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G YN +++L + EA +LL++M + G P +T+ I G CK+G E
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 305 AKKFYR--IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
A + M SGLSP+ + +++ +CK A K ++ +G PN T +L
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249
Query: 363 VTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ GL+ +K+ EA +L+ +V+ N T++ + GL
Sbjct: 250 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 288
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+S A ++ +M K+I P+ ++GAL+ G K+ + ++ + + G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEM-LSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
V YN I LCK + A L D+M + G +P VTYS I G C+D ++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K M+ G +PN+ Y T+V + G + A ++ A G P T ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 366 LAGASKVSEAKELIG---LVKEKFTKNVDTWNEIEAGL 400
L ++ A ++ +++ + +V T+N + GL
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGL 218
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 2/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AV ++M + +N L+ + +E + E + G P + TY
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA-GFHPSVVTYTT 353
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+ C S A IL M + PNA ++ ++V G K + + + M R
Sbjct: 354 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 413
Query: 247 MKSG-VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + V Y+ I LCK K EA L+ M+ G P+ VT+S I G C G +
Sbjct: 414 VVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 473
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R M+ G P+ Y T+V +C+ + A ++ + G P+ +T ++++ G
Sbjct: 474 LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533
Query: 366 LAGASKVSEAKEL 378
L ++ +AK +
Sbjct: 534 LLEVNRDEDAKRI 546
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 44/321 (13%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ + A F+E +V +N ++ L + ++ + +G +P
Sbjct: 41 GKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPT 100
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS----------------------- 217
+ TY+ +I C + +L EM + PNA
Sbjct: 101 VVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLE 160
Query: 218 ------------SFGALVAGFYKEEKYEDVNKVLQ--MMERYGMKSGVSMYNVRIHSLCK 263
+FG ++ G KE + E +V+ M G+ V +N + LCK
Sbjct: 161 QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
++ +A + L +G +PN VTYS I G K +EA + M G N+
Sbjct: 221 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 280
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y T+V + K G E A+ ++ G +P+ T +L+ G ++ EA +GL++
Sbjct: 281 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA---VGLLR 337
Query: 384 E----KFTKNVDTWNEIEAGL 400
E F +V T+ + GL
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGL 358
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 4/207 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H + ++ + L + F+ + L+ + R N ++ + +A A+
Sbjct: 345 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 404
Query: 132 TFKEM--DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
F++M DE H + A++AL+ L A E F+E G PD+ T++ +I
Sbjct: 405 YFEKMARDEVVAPHVI-AYSALIDGLCKAGKIDEAYE-FLERMIRAGRIPDVVTFSILIN 462
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C++ + + M + P+ ++ LV + + ++ + Q M G+
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDE 276
S IH L ++ + +AK + DE
Sbjct: 523 DRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 1/291 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+FSI I+ L + ++ QN + + I +N E KEM
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 478
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
R + N++ L +D + E + +G +P + Y ++K C+
Sbjct: 479 KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREM-RVHGHEPWIKHYTLLVKQLCKRKR 537
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
S+ A + LAEM R+ P+ ++ A + GF K + + ++ + + G V YN
Sbjct: 538 SAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT 597
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I+ CK+++ +EA +LDEM++KG+ P+ VTY+ I G+CK+G+ ++A M
Sbjct: 598 LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE 657
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
PN Y T++ +C G + A+ E KG PN + +L+ GL
Sbjct: 658 REPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC 708
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 3/265 (1%)
Query: 116 SIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
SI++ G N + A+ F++M + +V +N L+ L+ + +E + E K
Sbjct: 421 SIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM-K 479
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G +P T+N + C D + A ++ EM +P + LV K ++
Sbjct: 480 GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSA 539
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ L M R G + Y+ I K++ +A + ++ ++G P+ V Y+ I
Sbjct: 540 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 599
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFCK EA M GL P+ Y ++ CK GD + A + K
Sbjct: 600 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 659
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL 378
PN T +L+ GL A + +A L
Sbjct: 660 PNVITYTTLIDGLCNAGRPDDAIHL 684
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L LAL++ +D V G K ++ YN +I S+ Y +L EM
Sbjct: 433 LDLALSLFRDMVRV-----------GCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 481
Query: 211 SIKPNA----SSFGALVAGFYKEEKYEDVNKVLQM---MERYGMKSGVSMYNVRIHSLCK 263
+P S FG L + EDV L M M +G + + Y + + LCK
Sbjct: 482 GFRPTQFTHNSIFGCLC-------RREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCK 534
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
++ AEA L EM+ +G P+ V YS I GF K ++A + +R + G P+
Sbjct: 535 RKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVA 594
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
Y T++ CK A E +AKG VP+ T L+ G + +A + +V
Sbjct: 595 YNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMV 654
Query: 383 KEKFTKNVDTWNEIEAGL 400
++ NV T+ + GL
Sbjct: 655 GKEREPNVITYTTLIDGL 672
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 136/378 (35%), Gaps = 51/378 (13%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+D SI + S+ + + +E ++ NE+ I + + + + A++
Sbjct: 226 VDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQL 285
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD------------ 180
FK+M + V ++AL+ L K+ ++ + E K GI PD
Sbjct: 286 FKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEM-KELGIDPDIQILSKLIPYCS 344
Query: 181 ---------------LDT------YNRVIKAFCESSDSSSAYSILAEMD----------- 208
LDT YN V+ AY +L M
Sbjct: 345 EEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVN 404
Query: 209 -----RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
++ ++P +SF ++ G K + + + M R G K V +YN I L
Sbjct: 405 KFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSN 464
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ E LL EM G +P T++ C+ + A R M G P
Sbjct: 465 SNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKH 524
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
Y +V +CK A F E + +G++P+ + + G V +A E+ +
Sbjct: 525 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 584
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ +V +N + G
Sbjct: 585 ARGYCPDVVAYNTLINGF 602
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 8/225 (3%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P +++ VI C + A S+ +M R K N + L+ + E+
Sbjct: 413 VRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECY 472
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L+ M+ G + +N LC+ A ++ EM G +P Y+ +
Sbjct: 473 LLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 532
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK EA F M G P+ Y + K + AL ++ A+G+ P+
Sbjct: 533 CKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDV 592
Query: 357 TTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN--VDTW 393
+L+ G +VSEA +++ GLV T N +D W
Sbjct: 593 VAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGW 637
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 1/155 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T V++A+C S A S+ E+ + + LV F K + +
Sbjct: 189 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTFSKCGEVDKA 247
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++++ ME G++ + V IH + + +A L +M G P+ Y I G
Sbjct: 248 FELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGG 307
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
C E+A M G+ P+ + ++ +
Sbjct: 308 LCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPY 342
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M +H + ++N L+ D ++ + K P L TYN
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP-TPTLVTYNI 475
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK +C+S D+ A +L M +P+ S+ L++GF K K E + + M G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y I CK K A +L+ M G +PN TY+ I+G K NF A+
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ ++M +SP+ Y T++ +C G AL + + G +PN T SL+ L
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
+V EA+E+ GL+ ++ T
Sbjct: 656 GQEGRVEEAEEMFSELKKQGLIPDEVT 682
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
TE A+ M + + ++ +N ++ + D RV +E K G +PD +Y
Sbjct: 451 TEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV-LELMKANGCQPDEWSYT 509
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ S A + EM + + PN ++ AL++G+ K+EK + ++L+ M+R
Sbjct: 510 ELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRS 569
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + V YNV IH L K + A+ L ML + + P+ VTYS I G C +G A
Sbjct: 570 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLA 629
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + M G PN Y +++ + + G E A E +G +P+ T ++
Sbjct: 630 LEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEV 689
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ KV A + +G ++ + T++ + GL
Sbjct: 690 CVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 7/289 (2%)
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++ G N A+ EM H + +V F A ++AL ++ ++FI+
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM- 359
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G KP++ TY +I S A + M R + PN ++ AL+ + +
Sbjct: 360 KKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ V MM ++G S YN I C + +A ++L ML P VTY+
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+C G+ + A + +M +G P+ Y ++ CK E A G E + +G
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
PN T +L++G K+ A ++ +K + NV T+N + GL
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK+ ++ + A + L ++ K ++ L+ K V + R G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ + +YN I++LCK +A+++++++ GMKP++ TY+ I G+C++ + + A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M G PN++ Y T++ +C G AL F E G +P T + + L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 367 AGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAG 399
++ +A K I + K+ NV T+ + +G
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 16/255 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N L + T+ Y ++ R G++P+L YN VI A C+ + A SI+ ++
Sbjct: 203 LNKLNMTSTVMDRYHQILR--------EGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ +KP+ ++ +++ G+ + + ++ M+ G + + Y+ I+ LC +
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA + EM G+ P T++ I C G E+A K + M G PN Y ++
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 328 VYFMCKGGDY--ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KE 384
+ G A+G G VPN T +L+ L ++ A + ++ K
Sbjct: 375 I-----SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKH 429
Query: 385 KFTKNVDTWNEIEAG 399
N ++NE+ G
Sbjct: 430 GCLPNTSSYNELIRG 444
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G K L TY ++ + + +S+ ++ R+ ++PN + +++ K+ D
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + + GMK Y I C+ R A + + M +G +PN+ TYS I G
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLING 307
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G EA F M+ G+ P + + +C G E A + KG PN
Sbjct: 308 LCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPN 367
Query: 356 FTTMKSLVTG 365
T SL++G
Sbjct: 368 VYTYTSLISG 377
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 33/319 (10%)
Query: 78 FSIAINKLSEANYFNG---ISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRT 132
+++ I+ L++ N F+G + + + E K PD+ +S ++ G N A+
Sbjct: 578 YNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVV-----TYSTVINGLCNNGAIPLALEM 632
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F +M +H ++ +++L+ AL +E + +F E K G+ PD TY ++I+
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL-KKQGLIPDEVTYVKMIEVCV 691
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-------------------- 232
S A+ L EM +P ++ L+ G E Y
Sbjct: 692 MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQII 751
Query: 233 -EDVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+DV VL + + +Y+ + L + + EA L M+S+ PN TY
Sbjct: 752 NKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYK 811
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
HF+ + + A ++ MS+ + + Y ++ +C+ + A ++ +++
Sbjct: 812 HFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSR 871
Query: 351 GWVPNFTTMKSLVTGLAGA 369
+ L+ GL GA
Sbjct: 872 ALNADEIVWTILINGLLGA 890
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 61/138 (44%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y+ ++ S A ++ M +S PN ++ + + K + V + M
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ ++ Y I +LC+L + EA+ + ++MLS+ + + + ++ I G G +
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894
Query: 304 EAKKFYRIMSNSGLSPNS 321
+F IM + +P+S
Sbjct: 895 LCMEFLHIMETNRRNPSS 912
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 9/300 (3%)
Query: 104 RPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+PD+ A++ ++ G +AN E+A R M V +N ++ +
Sbjct: 135 KPDV-----FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+F E K +P + TY +I+A A +L EM K ++P+ ++ A
Sbjct: 190 DLALEIFEELLKD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ G KE + ++L+ + G K + YN+ + +L K +E + L+ EM+S G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KPN VT+S I C+DG EEA R M GL P++ Y ++ C+ G + A
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLAT 368
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
F + I+ G +P+ +++ GL K +A E+ + E NV ++N + + L
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 156/331 (47%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D A++ I+ +AN ++ L+ +K+R PD+ S G+ ++ A+
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL---AL 193
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F+E+ + +V + L+ A TI +V ++ + G++PD TYN +I+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEA-TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A+ +L + + KP+ ++ L+ K+ + K++ M G K
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V +++ I +LC+ K EA LL M KG+KP++ Y I GFC++G + A +F
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + G P+ Y T++ +C+ G + AL ++ G PN ++ +L + L +
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432
Query: 371 KVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
A E+I L+ + + T+N + + L
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCL 463
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 20/355 (5%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNE 110
N ++L+ ++ P D + ++I I + + EEL P +
Sbjct: 156 NANRVLDRMKSRGFLP----DVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITY 211
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKR 166
+ IL G ++ A++ EM L +NA++ + + K ++ ++
Sbjct: 212 TILIEATILDGGIDV---AMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRS 268
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ + G KPD+ TYN +++ S +++EM KPN + L+
Sbjct: 269 L-----SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTL 323
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
++ K E+ +L+ M+ G+K Y+ I C+ + A L+ M+S G P+
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDI 383
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V Y+ + G C+ G ++A + + + G PN S Y T+ + GD AL +
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILK 443
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
+ +G P+ T SL++ L V EA E L+ + ++ NV ++N I GL
Sbjct: 444 LLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 36/256 (14%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E G PD+ ++IK F S + A ++ ++R KP+ ++ AL++GF
Sbjct: 91 FLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFI 149
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC---KLRKCAE--------------- 269
K + E+ N+VL M+ G V YN+ I S C KL E
Sbjct: 150 KANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVI 209
Query: 270 -----------------AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
A LLDEMLSKG++P+++TY+ I G CK+ ++A + R +
Sbjct: 210 TYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL 269
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S+ G P+ Y ++ + G + E I+ G PN T L+ L KV
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKV 329
Query: 373 SEAKELIGLVKEKFTK 388
EA L+ +KEK K
Sbjct: 330 EEAVNLLRSMKEKGLK 345
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 1/261 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M + A + + + + +N LL L + E +++ E + G KP++ T+
Sbjct: 258 MVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM-ISIGCKPNVVTH 316
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+ +I C A ++L M K +KP+A + L+AGF +E + + + L+ M
Sbjct: 317 SILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G + YN + LC+ K +A + +++ G PN +Y+ G+
Sbjct: 377 DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYR 436
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + + N G+ P+ Y +++ +C+ G + A+ + + + PN + ++
Sbjct: 437 ALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILL 496
Query: 365 GLAGASKVSEAKELIGLVKEK 385
GL ++ ++A E++ + EK
Sbjct: 497 GLCKVNRANDAIEVLAAMTEK 517
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ C + + + L M K P+ L+ GF+ +V++++ERY
Sbjct: 74 KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K V YN I K + A +LD M S+G P+ VTY+ I FC G + A
Sbjct: 134 G-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + P Y ++ G + A+ E ++KG P+ T +++ G
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 366 LAGASKVSEAKELIGLVKEKFTK-NVDTWN 394
+ V +A EL+ + + K ++ T+N
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYN 282
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 10/308 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D F+ I+ L + N + ++ ++ + R PD F H + G+ N +
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ L N L+ ++ KE + E +G +PD+ TYN ++
Sbjct: 347 IKIPCPNNAIL-------NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ S A ++ EM R+ +PN ++ LV G K E+ VL M G+
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+YN I +LC+ K A LL EM +KG KP+ TY+ IYG CK +EA + +
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G N+ Y T+++ + + G ++ AL + + +G + T L+
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579
Query: 371 KVSEAKEL 378
+ + EL
Sbjct: 580 NIEKGLEL 587
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 146/353 (41%), Gaps = 38/353 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + INKL F I + L ++K + E + YG+A A+R +M
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEV-KRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
L L+L + + + +V VF + + G+ P + T+ V+KA C +
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM-LSKGVSPTVFTFGIVMKALCMFN 232
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ SA S+L +M + PN+ + L+ ++ + + K+L+ M G V +N
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY------ 309
IH LCK+ K +A L+D ML +G P+++TY ++G C+ G EA+K
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP 352
Query: 310 --------------------------RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
M N G P+ Y +++ +CK G A
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
E +G PN T LV GL A + EA GLV + + T N +
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEA----GLVLHEMSARGLTINSV 461
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 12/312 (3%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
+L EA F +++ + +PD+ H + G + V EM
Sbjct: 369 QLKEAQSF--LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV---NEMSRRGCEP 423
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V + L+ L A +E V E G+ + YN +I A C A ++
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEM-SARGLTINSVIYNCLICALCRKEKVHVALNL 482
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L+EM K KP+ ++ +L+ G K ++ ++ ++ M G + YN IH+L +
Sbjct: 483 LSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+A L+++ML +G + +TY+ I FCK GN E+ + Y M GL ++
Sbjct: 543 RGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI---- 379
M+ +CK G + A F +++I +G+VP+ T S++ GL ++ EA L
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662
Query: 380 --GLVKEKFTKN 389
G+ + FT N
Sbjct: 663 VEGVRPDAFTYN 674
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 1/295 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++I +N L +A L E+ R N + I + A+ E
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +N+L+ L E R+F + ++ TYN +I A
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV-TYNTLIHALLRRG 544
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +++ +M + + ++ L+ F K E ++ + M G+ + N
Sbjct: 545 AFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I+ LCK+ K A L + +++G P+ VTY+ + G CK G +EA + +
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVE 664
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
G+ P++ Y T + + CK G A F I G+VP+ T LV L S
Sbjct: 665 GVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQS 719
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D TYN +IKAFC+ + + +M + + S ++ G K K ++
Sbjct: 560 GCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA 619
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L+ G + YN ++ LCK+ + EA L D + +G++P++ TY+ FI
Sbjct: 620 FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
CK+G +A F+ +G P++ + +VY + K + E
Sbjct: 680 QCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 5/282 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ M A+ + M E L V FN++L L + + VF + G +P++
Sbjct: 485 KSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF-KRALERGCRPNV 543
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ +I + + A +LA+M + N ++ +V G K + ED VL+
Sbjct: 544 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G YN I K ++ EA LL EML G P+ VTY+ +G C+ G
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV--PNFTTM 359
F+EA + M+ G +PN+ Y ++V +CK G ALG+ E +A+ V P+
Sbjct: 664 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY-FEKMARDEVVAPHVIAY 722
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+L+ GL A ++ EA E + +++ +V T++ + GL
Sbjct: 723 SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 25/323 (7%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ FS I L A N + E + + RF ++ +L G +A + + F
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF-TYAFLLEGLCKAGDSRRLEQCF 440
Query: 134 KEMDEHKLRHS---------------------VGAFNALLLALTIAKDYKEVKRVFIEFP 172
++M E + R S + +N L+ L+ + ++ +EF
Sbjct: 441 EQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALG-LLEFM 499
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ PD+ T+N V+ C+ A+++ + +PN ++ L+ G K K
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 559
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ ++L M G ++ Y+ + L K+ + +A +L +M G P++VTY+
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GF K EA R M +G P+ Y T+ + +C+ G ++ A+ A+G
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679
Query: 353 VPNFTTMKSLVTGLAGASKVSEA 375
PN T S+V GL A +V+EA
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEA 702
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
FK E R +V ++ L+ L+ E ++ + + G + + TY+ V+
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE-LGCRANTVTYSTVVDGL 588
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
+ A +L +M P+A ++ L+ GF+K ++ + +L+ M G V
Sbjct: 589 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y H LC+ + EA +LD M ++G PN++TYS + G CK G EA ++
Sbjct: 649 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 708
Query: 312 MS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M+ + ++P+ Y ++ +CK G + A F + I G +P+ T L+ GL A
Sbjct: 709 MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768
Query: 371 KVSEAKELIGLVKEKFTK 388
++ EL + E+ K
Sbjct: 769 RIDTGLELFCGMAERGCK 786
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 142/342 (41%), Gaps = 47/342 (13%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEHAV 130
+A+S I+ L +A + ++LE + PD+ SI++ G A + +
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVT-----FSILINGLCDAGRIDTGL 774
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F M E + + A+NA++ A + ++ + E KT+GI + T+ VIKA
Sbjct: 775 ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM-KTHGIAKNTVTHGIVIKA 833
Query: 191 FC---------------------------------ESSDSSSAYSILAEMDRKSIKPNAS 217
C S S A +L M P+A
Sbjct: 834 LCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDAC 893
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ ++ G +K E K+LQ M G + Y + I L K ++ A +EM
Sbjct: 894 NYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEM 953
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L K +KP+++ YS I FCK ++A K R +SG+ P ++Y TMV +CK
Sbjct: 954 LRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGT 1010
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ AL +E +K P SL T +V EA +L+
Sbjct: 1011 DKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLV 1052
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 118/290 (40%), Gaps = 65/290 (22%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P+ TYN ++ A + A+S+L M P +FG ++ G KE + E
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAA 125
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF--- 292
+V+ M G V ++ V +H+LC+L + EA ++L G P++VTY+
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 293 --------------------------------IYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ G K GN A +F+ M +G+SPN
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245
Query: 321 SSVYFTMVYFMCKGGDYETALGFCK-------------------------ESI----AKG 351
+ Y ++ +CK G + ALG + E+I A
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP 305
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
VPN SL+ GL A +V EA EL ++KE + +V T+N + GL
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 100/205 (48%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I C++ A++ + + +P ++ ++ G ++ + + K+L+ M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G YN +++L + EA +LL+ M + G P +T+ I G CK+G
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A + M + G P+ ++ +++ +C+ G + A F ++ + G+ P+ T ++
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 363 VTGLAGASKVSEAKELIGLVKEKFT 387
V GL A ++ A ++ L+ E F+
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFS 207
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKT--YGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
+N L+ L A V F F K +G +P + TY+ VI C ++ +L
Sbjct: 4 YNVLINGLCKAG---RVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
EM + PNA ++ LV + + ++ +L+ M G + + + I LCK
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A ++DEM+ +G P+ ++ ++ C+ G +EA F++ + G +P++ Y
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGW-VPNFTTMKSLVTGLAGASKVSEAKELI-GLVK 383
TMV + K G E A G + +A+ + P T V GL+ A ++ A E + +
Sbjct: 181 TMVDGLYKAGRLEAA-GMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 384 EKFTKNVDTWNEIEAGL 400
+ N T++ + GL
Sbjct: 240 TGVSPNTVTYDALIDGL 256
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 9/274 (3%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A + + E +V F + L+ A + F P+T G+ P+
Sbjct: 188 KAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT-GVSPNT 246
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ +I C++ A +L + K+ + +F +L+ G + + E+ ++L+
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKA 303
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M V +N ++ LC+ R+ EA L D M G + +TY+ + G CK
Sbjct: 304 MP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360
Query: 302 FEEAKKFYRIMSNS-GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA-KGWVPNFTTM 359
EA + +M + G SPN + T++ +C G A + +A +G PN T
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTY 420
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTW 393
L+ GL A ++ + E+ ++ +W
Sbjct: 421 AFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSW 454
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 33/282 (11%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV M + +++++ L A E F + + + P + Y+
Sbjct: 665 DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 724
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ AY L M R P+ +F L+ G + + ++ M G
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K+ + YN I++ C + + A ALL+EM + G+ N+VT+ I C + +EA
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV 844
Query: 307 KFY---------------------------------RIMSNSGLSPNSSVYFTMVYFMCK 333
++ R M G SP++ Y T++ + K
Sbjct: 845 SYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFK 904
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G E A +E ++G P+ T +++GL+ A ++ A
Sbjct: 905 AGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VTY+ I G CK G +A +R G P Y T++ +C+ + + +E
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+G PN T +LV L G + EA L+
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLL 94
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR- 104
+T L + E+ LE+ RA S D + ++ L +A ++ L+E+++R
Sbjct: 864 ITSLVASRRSEQALELLRAMVADGGSP-DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRG 922
Query: 105 --PDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
PDL+ ++I++ G +A A F+EM L+ +++L+ A A
Sbjct: 923 HSPDLRT-----YTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK 977
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ ++ ++ GI+P + Y+ ++ + C++ + A ++ EM K+ +P +
Sbjct: 978 VDDAWKLL----RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWT 1033
Query: 221 ALVAGFYKEEKYEDVNKVLQMME 243
+L + E + ++ K++ ++
Sbjct: 1034 SLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 144/295 (48%), Gaps = 13/295 (4%)
Query: 85 LSEAN-YFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKL 141
+SEA YF+ + T+ D+ E ++I++ G A + AVR++K++ E +
Sbjct: 488 ISEAQMYFDSV--------TKSDVAEEII-LYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 538
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
++ FN+L+ E ++ ++ K +G+ P TY ++ +CE D S +
Sbjct: 539 SPTIVTFNSLIYGFCKKGKLAEAVKL-LDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 597
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM+ K+IKP ++ +V G KE + + ++L+ M G+ YN I S
Sbjct: 598 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 657
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK +A L ++ML ++P+ VTY+ I G C GN ++A + + + +
Sbjct: 658 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 717
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
Y T++ C GD + AL F + + +G+ + +++ L + +++AK
Sbjct: 718 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAK 772
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 22/293 (7%)
Query: 105 PDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PDL ++I++ G M E + + ++M L+ S+ + LL +L +
Sbjct: 373 PDLV-----TYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + E + G+KPDL TY+R A + EM K I PN+ A+
Sbjct: 428 EAVILLHEM-EVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAI 478
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
++G +++ + + + + + +YN+ I KL EA +++ KG+
Sbjct: 479 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 538
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P VT++ IYGFCK G EA K + GL P S Y T++ C+ GD +
Sbjct: 539 SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD 598
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
E AK P T +V GL ++ E+ +L+ GL ++ T N
Sbjct: 599 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYN 651
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKD-YKEVKRVFIEFPKTY 175
Y +A M A+ +M L+ S+ +N+LL L I D Y E+K
Sbjct: 178 YSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIK--------AS 229
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ + T +I C S A + L E + P+ SF AL++GF K +
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
MM +YG+ V YN+ +H LC EA ++M + G++P+ VTY+ G
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F G A K + M +GL+P+ Y ++ C+ G+ E + ++ +++G +
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409
Query: 356 FTTMKSLVTGLAGASKVSEA------KELIGLVKEKFT 387
T L++ L + ++ EA E+IGL + T
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 28/278 (10%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M ++ L V ++N LL L +A +E F + +G++PD+ TYN + F
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE-FTNDMENHGVEPDIVTYNILANGFR 351
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S A+ ++ M + P+ ++ L+ G + E+ K+ + M G+K +
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH--------------------- 291
Y V + SLCK + EA LL EM G+KP+ +TYS
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPN 471
Query: 292 ------FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
I G + G EA+ ++ ++ S ++ +Y M+ K G+ A+ K
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+ I KG P T SL+ G K++EA +L+ +K
Sbjct: 532 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 569
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A+ ++EM ++ + +A++ L E + F K+ + ++ YN
Sbjct: 453 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS-DVAEEIILYN 511
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I + + + A ++ K I P +F +L+ GF K+ K + K+L ++ +
Sbjct: 512 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 571
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ Y ++ C+ +L EM +K +KP +TY+ + G CK+G E+
Sbjct: 572 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 631
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + M GL P+ Y T++ CK D + A + + P+ T L+ G
Sbjct: 632 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 691
Query: 366 LAGASKVSEAKELIGLVKEK 385
L + +A L+ ++++
Sbjct: 692 LCVYGNLKDADRLLVTLQDQ 711
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD TYN VI++FC++ D A+ + +M + S++P+ ++ L+ G +D
Sbjct: 642 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 701
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++L ++ ++ Y I + C A +M+ +G + + YS I
Sbjct: 702 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 761
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
CK +AK F+ +M G+ P+ + M+ + GD + I G +P
Sbjct: 762 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 17/269 (6%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ + L P S + ++ +N E + + L E++ + + ++
Sbjct: 563 KLLDTIKVHGLVPTS----VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI--TYT 616
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
+++ G + +V+ K M L +N ++ + A D ++ ++ + +
Sbjct: 617 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQ- 675
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+ ++P TYN +I C + A +L + +SI+ ++ ++ + D
Sbjct: 676 HSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAK---GD 732
Query: 235 VNKVL----QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
V L QM+ER G + + Y+ I+ LCK +AK ML+ G+ P+
Sbjct: 733 VQNALVFFHQMVER-GFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 791
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+ F + G+ + + +M GL P
Sbjct: 792 VMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
N HA + M EH +V + NA L +L + + E + + P+
Sbjct: 165 AHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPN 224
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ T N +I+A+C + + +L +M + PN SF L++G+ + + KV
Sbjct: 225 VYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKS 284
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+M G++ V +N I+ CK RK EA + +EM + P+ VTY+ + G+ + G
Sbjct: 285 LMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVG 344
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+ E + Y M +GL + Y ++ +CK G + A GF +E + VPN +T
Sbjct: 345 DSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFS 404
Query: 361 SLVTG 365
+L+TG
Sbjct: 405 ALITG 409
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+VK + +E G++P++ T+N +I FC+ A + EM ++ P+ ++ L
Sbjct: 281 KVKSLMVE----NGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTL 336
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G+ + E +V + M R G+K+ + YN I LCK K +A + E+ + +
Sbjct: 337 LNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENL 396
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN+ T+S I G C N E A YR M SG SPN + ++ CK D++ A+
Sbjct: 397 VPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQ 456
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
++ + + P+ +TM L GL K
Sbjct: 457 VLRDMLGRLMSPDLSTMSELCDGLCRCGK 485
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ M E+ ++ +V FN L+ + E RVF E K + P + TYN ++
Sbjct: 279 ALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEM-KVANVDPSVVTYNTLL 337
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + DS + EM R +K + ++ AL+ G K+ K + ++ +++ +
Sbjct: 338 NGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLV 397
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
S ++ I C A + M+ G PN T+ I FCK+ +F+ A +
Sbjct: 398 PNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQV 457
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
R M +SP+ S + +C+ G + AL C E + +P+
Sbjct: 458 LRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-FIEFPKTYGIK 178
YGQ +E VR ++EM + L+ + +NAL+L L KD K K F+ +
Sbjct: 340 YGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGL--CKDGKTKKAAGFVRELDKENLV 397
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ T++ +I C ++S A+ I M R PN +F L++ F K E ++ +V
Sbjct: 398 PNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQV 457
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
L+ M M +S + LC+ K A AL EM + + P+
Sbjct: 458 LRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 9/345 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+I+EI + P D + +++ I ++ + Q LE + PD+ S
Sbjct: 163 RIMEILENSGAVP----DVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRS 218
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ G+ + A+ + + V + L+ A + ++ E K G
Sbjct: 219 LCDSGK---LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK-G 274
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
KPD+ TYN +I C+ A L M +PN + ++ ++ D
Sbjct: 275 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE 334
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L M R G V +N+ I+ LC+ R A +L++M G PNS++Y+ ++GF
Sbjct: 335 RLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGF 394
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C++ + A ++ IM + G P+ Y T++ +CK G + A+ + +KG P
Sbjct: 395 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVL 454
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T +++ GL K A EL+ ++ K K ++ T++ + GL
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGL 499
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 8/277 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A++ EM + + V +N L+ + E + P YG +P++ T+N +
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP-LYGCQPNVITHNII 320
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+++ C + A +LA+M RK P+ +F L+ ++ VL+ M ++G
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 380
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
YN +H C+ +K A L+ M+S+G P+ VTY+ + CKDG + A +
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVE 440
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+S+ G SP Y T++ + K G E A +E KG P+ T +L+ GL
Sbjct: 441 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLG 500
Query: 368 GASKVSEAKELI----GLVKEKFTKNVDTWNEIEAGL 400
KV EA ++ GL + T+N I GL
Sbjct: 501 CEGKVDEAIKIFHDMEGL---SIKPSAVTYNAIMLGL 534
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 15/316 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFH 113
K+L+ R P D + +++ IN + + + ++L + +P++
Sbjct: 265 KLLDEMRKKGCKP----DVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT---- 316
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
H+IIL + A R +M SV FN L+ L + V +
Sbjct: 317 -HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
PK +G P+ +YN ++ FC+ A L M + P+ ++ L+ K+ K
Sbjct: 376 PK-HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 434
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ ++L + G + YN I L K+ K A LL+EM KG+KP+ +TYS
Sbjct: 435 ADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYST 494
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ G +G +EA K + M + P++ Y ++ +CK A+ F + KG
Sbjct: 495 LLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 554
Query: 352 WVPNFTTMKSLVTGLA 367
P T L+ G+A
Sbjct: 555 CKPTKATYTILIEGIA 570
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E G PD+ +I+ FC S + A I+ ++ P+ ++ L+ G+
Sbjct: 129 FLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYC 188
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K +++K LQ++ER + V YN + SLC K EA +LD + + P+ +
Sbjct: 189 KS---GEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI 245
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I C D +A K M G P+ Y ++ +CK G + A+ F
Sbjct: 246 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 305
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
G PN T ++ + + +A+ L+ ++++ + +V T+N
Sbjct: 306 PLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N+ + L + + E L+ M+ +G P+ + + I GFC+ G +A + I+ N
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-SIAKGWVPNFTTMKSLVTGLAGASKVS 373
SG P+ Y ++ CK G+ + AL + S+A P+ T +++ L + K+
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA----PDVVTYNTILRSLCDSGKLK 226
Query: 374 EAKELI 379
EA E++
Sbjct: 227 EAMEVL 232
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I C+ K +A +++ + + G P+ +TY+ I G+CK G ++A + MS +
Sbjct: 149 IRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---V 205
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P+ Y T++ +C G + A+ + + P+ T L+ S V +A +
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK 265
Query: 378 LIGLVKEKFTK-NVDTWNEIEAGL 400
L+ +++K K +V T+N + G+
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGI 289
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 134/279 (48%), Gaps = 3/279 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKE 135
+++ INK +A F+ I + + +K + +E F + + +YG A A+
Sbjct: 98 YALLINKFGQAKMFDEIEEVMSTIKLEKRCRFSEDFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + S +FN +L L AK + E+ ++F+ PK G++ D N +IK CES
Sbjct: 158 MPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPK-LGVEIDACCLNILIKGLCESG 216
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A +L E ++ +PN +F L+ GF + K+E+ K+L+ ME+ ++ +N
Sbjct: 217 NLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I L K + E LL+ M KG +PN TY +YG EAK+ M +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G+ P+ Y MV +C+ ++ + G+VP
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVAEMDWVLRKMVNHGFVP 375
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A IL M P+A SF ++ + +++++K+ + G++ N+ I
Sbjct: 151 AIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC+ A LLDE + +PN +T+S I GFC G FEEA K M + P
Sbjct: 211 GLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ + ++ + K G E + + KG PN T + ++ GL + EAKE++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 4/170 (2%)
Query: 235 VNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+N+ +++ M +G +N ++ L + E + G++ ++ +
Sbjct: 148 INRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G C+ GN E A + PN + ++ C G +E A + +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
P+ T L++GL +V E +L+ +K K + N T+ E+ GL
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGL 317
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 10/305 (3%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHK 140
+ + EAN + + + E PD F S+I+ Y Q + A + FKEM
Sbjct: 231 VGNVEEANQYVSM---IVEAGLDPDF----FTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
R + A+ L+ L + + E +F++ K P + TY +IKA C S S A
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKM-KDDDCYPTVRTYTVLIKALCGSERKSEA 342
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+++ EM+ K IKPN ++ L+ + K E ++L M G+ V YN I+
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
CK +A +++ M S+ ++PN+ TY+ I G+CK N +A M + P+
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPD 461
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y +++ C+ G++++A +G VP+ T S++ L + +V EA +L
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 381 LVKEK 385
+++K
Sbjct: 522 SLEQK 526
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M E A+ + M+ LR + +N L+ +K + + + + P
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERK--VLP 460
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I C S + SAY +L+ M+ + + P+ ++ +++ K ++ E+ +
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+E+ + V MY I CK K EA +L++MLSK PNS+T++ I+G C D
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA M L P S +++ + K GD++ A ++ ++ G P+ T
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640
Query: 360 KSLVTGLAGASKVSEAKELIGLVKE 384
+ + ++ +A++++ +KE
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKE 665
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 1/275 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ + + + EM E K+ ++ +N ++ + +E + ++ G+ PD TY
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQ-YVSMIVEAGLDPDFFTY 256
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I +C+ D SA+ + EM K + N ++ L+ G E + ++ + M+
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKD 316
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
V Y V I +LC + +EA L+ EM KG+KPN TY+ I C E+
Sbjct: 317 DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A++ M GL PN Y ++ CK G E AL + ++ PN T L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK 436
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
G + L +++ K +V T+N + G
Sbjct: 437 GYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 5/282 (1%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ + +E RP N R + I Y + N+ A+ +M E K+ V +N+L+
Sbjct: 415 VVELMESRNLRP---NTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
+ ++ R + G+ PD TY +I + C+S A + +++K +
Sbjct: 471 GQCRSGNFDSAYR-LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PN + AL+ G+ K K + + +L+ M +N IH LC K EA L
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++M+ ++P T + I+ KDG+F+ A + ++ M +SG P++ Y T + C+
Sbjct: 590 EEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + A + G P+ T SL+ G + + A
Sbjct: 650 EGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 1/220 (0%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ YN ++ + + EM + PN ++ +V G+ K E+ N+ +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M+ G+ Y I C+ + A + EM KG + N V Y+H I+G C +
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA + M + P Y ++ +C AL KE KG PN T
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 361 SLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
L+ L K+ +A+EL+G + EK NV T+N + G
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNA 150
G+ + E K PD+ ++ ++ GQ + A R M++ L + +
Sbjct: 448 GVLNKMLERKVLPDVV-----TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTS 502
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ +L +K +E +F + + P++ Y +I +C++ + A+ +L +M K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQK-DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ PN+ +F AL+ G + K ++ + + M + ++ VS + IH L K A
Sbjct: 562 NCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+MLS G KP++ TY+ FI +C++G ++A+ M +G+SP+ Y +++
Sbjct: 622 YRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKG 681
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G +A K G P+ T SL+ L
Sbjct: 682 YGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 20/245 (8%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L+ +V L+ L D+ R F + + G KPD TY I+ +C A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLQDA 656
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
++A+M + P+ ++ +L+ G+ + VL+ M G + + I
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716
Query: 261 LCKLR----------KCAEAKA--------LLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
L +++ C + LL++M+ G+ PN+ +Y + G C+ GN
Sbjct: 717 LLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776
Query: 303 EEAKKFYRIMSN-SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A+K + M G+SP+ V+ ++ CK + A + I G +P + K
Sbjct: 777 RVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKI 836
Query: 362 LVTGL 366
L+ L
Sbjct: 837 LICRL 841
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--FIEFPKTYGIKPDLDTY 184
E + TF + +H L G + + + E V +E +G+ P+ +Y
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSY 763
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+++ CE + A + M +K I P+ F AL++ K EK+ + KV+ M
Sbjct: 764 EKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMI 823
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAE---AKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
G + + I C+L K E ++ +L G + + + I G K G
Sbjct: 824 CVGHLPQLESCKILI---CRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQG 880
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E + + +M +G + +S Y ++
Sbjct: 881 LVEAFYELFNVMEKNGCTFSSQTYSLLI 908
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 2/175 (1%)
Query: 123 ANMTEH--AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+NM E V ++M EH + + ++ L+L + + + ++VF + GI P
Sbjct: 736 SNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPS 795
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+N ++ C+ + A ++ +M P S L+ YK+ + E V Q
Sbjct: 796 ELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQ 855
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + G + + I + K L + M G +S TYS I G
Sbjct: 856 NLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE + G+KP+ TYN VI C++ + A +L EM + I P+ + L+ GF
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K ++ M++ + Y I LC+ + EA L EM+ K ++P+ V
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I G+CK+G +EA + M GL+PN Y + +CK G+ +TA E
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
KG N T SLV GL A + +A +L+
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 421
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E ++ +EM L+ + +N ++L L E +RV E + GI PD Y
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI-SEGIAPDGVIYTT 263
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ + SSAY + EM ++ I P+ ++ A++ G + + + +K+ M
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ Y I CK K EA +L ++ML G+ PN VTY+ G CK G + A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M GL N Y ++V +CK G+ + A+ K+ G+ P+ T +L+
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443
Query: 367 AGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ ++ A EL+ ++ + V T+N + G
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGF 478
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 2/304 (0%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ + +EE++ + N + I+L + A R +EM + + L+
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
+ R+F E K I PD TY VI C++ A + EM K ++
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ ++ AL+ G+ KE K ++ + M + G+ + Y LCK + A L
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L EM KG++ N TY+ + G CK GN ++A K + M +G P++ Y T++ CK
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDT 392
+ A ++ + + P T L+ G + + + ++L+ + EK N T
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505
Query: 393 WNEI 396
+N +
Sbjct: 506 YNSL 509
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 16/351 (4%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERF 112
E++L + + P D + ++ I+ + + + +E++ R PD F
Sbjct: 243 ERVLREMISEGIAP----DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD-----F 293
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
++ ++ G Q A + F EM +L + AL+ KE + +
Sbjct: 294 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 353
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G+ P++ TY + C+ + +A +L EM RK ++ N ++ +LV G K
Sbjct: 354 MLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ K+++ ME G Y + + CK R+ A LL +ML + ++P VT++
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ GFC G E+ +K + M G+ PN++ Y +++ C + + AK
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
G VP+ T L+ G A + EA L +V + F V ++N + G
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 583
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ ++ TYN ++ C++ + A ++ +M+ P+A ++ L+ + K +
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++L+ M ++ V +NV ++ C + + LL ML KG+ PN+ TY+ I
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C N + YR M G+ P+ + Y ++ CK + + A ++ + KG+
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
++ +L+ G K EA+EL GLV ++ N+
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLD---TYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
T +KD K +++ +F + P+LD ++ R K F D Y +L +D S
Sbjct: 137 TASKDLKMARKLIQDF----WVNPNLDVGVSFAR--KLF----DKMLNYGLLISVD--SC 184
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
S + G K E V K+++ M+ G+K YN I LCK K AEA+
Sbjct: 185 NLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAER 244
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+L EM+S+G+ P+ V Y+ I GFCK GN A + + M +SP+ Y ++ +C
Sbjct: 245 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 304
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVD 391
+ G A E + K P+ T +L+ G K+ EA L +++ T N+
Sbjct: 305 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 364
Query: 392 TWNEIEAGL 400
T+ + GL
Sbjct: 365 TYTALADGL 373
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 1/237 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + AV+ K+M+ + L+ A +++ + + ++P +
Sbjct: 410 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTV 468
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N ++ FC S +L M K I PNA+++ +L+ + ++ +
Sbjct: 469 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 528
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ + YN+ I CK R EA L +M+ KG +Y+ I GF K
Sbjct: 529 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 588
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
F EA++ + M GL + +Y G E L C E+I K V + T
Sbjct: 589 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 92/156 (58%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++ G++ D+ TY +I+ C++++ A ++ EM I+PN + +L+ G+ K ++
Sbjct: 142 RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRW 201
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
EDV KV M G++ V MY I SLCK+ K +A ++D M+ +G++PN VTY+
Sbjct: 202 EDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL 261
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
I CK+G+ +EA + MS G++P+ Y T++
Sbjct: 262 INCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 4/225 (1%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMD---RKSIKPNASSFGALVAGFYKEEKYEDVN 236
D +YN V+ A C A ++L M + +PNA S+ L+ + + +
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAV 135
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L+ M G+++ V Y I LC + +A L+ EM G++PN V YS + G+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +E+ K + MS G+ P+ +Y ++ +CK G + A G + +G PN
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T L+ + V EA ++ + EK +V T+N + GL
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 37/346 (10%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + ++ LS+ G + L + R + ++ Y +A +A+R
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + S+ N + L ++ + F+E + GIKPD+ TYN +IK +C+ +
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALK-FLERMQVTGIKPDIVTYNSLIKGYCDLN 319
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV-------------------- 235
A ++A + K P+ S+ ++ KE+K E+V
Sbjct: 320 RIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTY 379
Query: 236 NKVLQMMERYG------------MKSGVSM----YNVRIHSLCKLRKCAEAKALLDEMLS 279
N ++ M+ ++G G + Y+ +HS C+ + EAK+L+ +M S
Sbjct: 380 NTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYS 439
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+G P+ VTY+ + GFC+ G +EAKK + M G PN+ Y ++ +C G
Sbjct: 440 RGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 499
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
A S W PN T +++ GL K+SEA +L + EK
Sbjct: 500 AREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEK 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 4/275 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD H + +G A + A+ KE + ++A++ + E
Sbjct: 374 PDQVTYNTLIHMLSKHGHA---DDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEA 430
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
K + I+ + G PD+ TY ++ FC A IL +M + KPN S+ AL+
Sbjct: 431 KSLVIDM-YSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLN 489
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G K + +++ + E + Y +H L + K +EA L EM+ KG P
Sbjct: 490 GLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFP 549
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
V + I C++ EAKK+ N G + N + T+++ C+ GD E AL
Sbjct: 550 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 609
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G P+ T +L L ++ EA ELI
Sbjct: 610 DDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELI 644
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 16/333 (4%)
Query: 56 EKILEI-CRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
+KI E+ C + S+L D++ ++ I+ LS+ + + +L+E Q++ F
Sbjct: 354 KKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA------QDKGF 407
Query: 113 H----AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
H +S I++ Q + A +M V + A++ E K+
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKK 467
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ + K +G KP+ +Y ++ C S S A ++ + PNA ++GA++ G
Sbjct: 468 ILQQMYK-HGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGL 526
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+E K + + + M G N+ I SLC+ +K EAK L+E L+KG N
Sbjct: 527 RREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINV 586
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
V ++ I+GFC+ G+ E A M SG P++ Y + + K G + A +
Sbjct: 587 VNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVK 646
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++KG P T +S++ + +V + L+
Sbjct: 647 MLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLL 679
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 130/316 (41%), Gaps = 13/316 (4%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM--T 126
H+D++ +S ++ + + + ++ +R PD+ ++ I+ G +
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVT-----YTAIVDGFCRLGRI 462
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + ++M +H + + ++ ALL L + E R I + + P+ TY
Sbjct: 463 DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA-REMINVSEEHWWTPNAITYGA 521
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ S A + EM K P L+ + +K + K L+ G
Sbjct: 522 VMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 581
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V + IH C++ A ++LD+M G P++VTY+ K G +EA
Sbjct: 582 CAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAA 641
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + GL P Y ++++ + G + L ++ + + P T ++ L
Sbjct: 642 ELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKL 699
Query: 367 AGASKVSEAKELIGLV 382
+ EA++L+G V
Sbjct: 700 CDFGNLEEAEKLLGKV 715
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 107/281 (38%), Gaps = 45/281 (16%)
Query: 83 NKLSEANYFNGISQYLEELKTRP--DLQNERFHAHSIILYG--------QANMTEHAVRT 132
N +S NG+ + L+ R ++ E + + I YG + ++E A
Sbjct: 480 NTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSE-ACDL 538
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM E + N L+ +L + E K+ ++E G ++ + VI FC
Sbjct: 539 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK-YLEECLNKGCAINVVNFTTVIHGFC 597
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL------------- 239
+ D +A S+L +M P+A ++ AL K+ + ++ +++
Sbjct: 598 QIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV 657
Query: 240 ---QMMERYGMKSGV-----------------SMYNVRIHSLCKLRKCAEAKALLDEMLS 279
++ RY V ++YN I LC EA+ LL ++L
Sbjct: 658 TYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLR 717
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
K ++ T + + K G A K M L+P+
Sbjct: 718 TASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPD 758
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 117/232 (50%), Gaps = 7/232 (3%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ A +F E + G++PD+ TY+ VI A C A +M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEM-REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 208 DRKSIKPNASSFGALVAGFYKEE---KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+ + P+ S++ L+ GF K +D+ VLQMM + GM+ + +N I++LCKL
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDL--VLQMMNK-GMRPDIGCFNFIINNLCKL 509
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A+ + D +S G+ PN + Y+ + G+C G E A + + +M ++G+ PN VY
Sbjct: 510 GRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVY 569
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
T+V CK G + L +E + KG P+ T ++ GL A + AK
Sbjct: 570 GTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 37/365 (10%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ +N L +A + L ++ + L + + I Y + AVR
Sbjct: 250 DLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVS 309
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF------------------------- 168
K+M + V N+L+ +L K+ + VF
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369
Query: 169 ---IEFPKTY------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
++ + + GI PD +N +IKA+ + A I EM + ++P+ ++
Sbjct: 370 GCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTY 429
Query: 220 GALVAGFYKEEKYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
++A + K +D V K QM+++ G+ +S Y+ I C +AK L+ +M+
Sbjct: 430 STVIAALCRIGKMDDAVEKFNQMIDQ-GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMM 488
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+KGM+P+ ++ I CK G +A+ + + GL PN VY T++ C G E
Sbjct: 489 NKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME 548
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT-WNEIE 397
AL ++ G PN +LV G ++ E L + K K T +N I
Sbjct: 549 NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIIL 608
Query: 398 AGLPQ 402
GL Q
Sbjct: 609 HGLFQ 613
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 8/237 (3%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
LL L AK E + + G PD+ +Y V+K+ C S A +L M
Sbjct: 149 LLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG 208
Query: 211 S--IKPNASSFGALVAGFYKEEKYEDVNKVLQM---MERYGMKSGVSMYNVRIHSLCKLR 265
PNA ++ ++ GF+KE DVNK + M + G+ +S YN +++LCK R
Sbjct: 209 GAVCLPNAVAYNTVIDGFFKEG---DVNKACDLFNEMVQRGISPDLSTYNCVVNALCKAR 265
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+A+A+L +M+ KG+ P++ TY+ IYG+ G ++EA + + M++ G+ P+
Sbjct: 266 AMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLN 325
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+++ +CK G + A KG + + K ++ G A + + EL L+
Sbjct: 326 SLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM 382
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 153/344 (44%), Gaps = 17/344 (4%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQ 122
+ P+SH+ F++ I ++ + + E++ PD+ ++ I +
Sbjct: 386 GIAPDSHI----FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVT---YSTVIAALCR 438
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ AV F +M + + S+ ++ L+ D + K + ++ G++PD+
Sbjct: 439 IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM-MNKGMRPDIG 497
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+N +I C+ A +I + PN + L+ G+ K E+ +V +M
Sbjct: 498 CFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVM 557
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G++ V +Y ++ CK+ + E +L E+L KG+KP++ Y+ ++G + G
Sbjct: 558 VSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRT 617
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
AK + M+ SG++ + Y ++ + K + A+ KE A + TT+ +
Sbjct: 618 VPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIM 677
Query: 363 VTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGL 400
+ G+ +V EAK+L GLV T ++ N I+ GL
Sbjct: 678 IAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGL 721
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 7/216 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PDL TYN V+ A C++ A +IL +M K + P+ ++ +L+ G+ ++++
Sbjct: 246 GISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEA 305
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + M G+ V N + SLCK K +A+ + D M KG K + +Y + G
Sbjct: 306 VRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNG 365
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G + + + +M + G++P+S ++ ++ K G + A E +G P+
Sbjct: 366 YATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPD 425
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
T +++ L K+ +A EKF + +D
Sbjct: 426 VVTYSTVIAALCRIGKMDDA-------VEKFNQMID 454
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM + + + +N ++ AL A+ + + + + G+ PD TYN +I
Sbjct: 235 ACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK-GVLPDNWTYNSLI 293
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + A + +M + I P+ + +L+A K K +D V M G K
Sbjct: 294 YGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQK 353
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + Y + ++ + L + MLS G+ P+S ++ I + K G + A
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATII 413
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G+ P+ Y T++ +C+ G + A+ + I +G P+ +T L+ G
Sbjct: 414 FNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCT 473
Query: 369 ASKVSEAKELI 379
+ +AK+L+
Sbjct: 474 HGDLLKAKDLV 484
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y E+A+R F M ++ +V + L+ E +F E GIKP
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK-GIKP 599
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
YN ++ ++ + A EM I + ++ ++ G +K ++ +
Sbjct: 600 STTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLF 659
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ + +K ++ N+ I + ++R+ EAK L + G+ P+ VTYS + K+
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719
Query: 300 GNFEEAKKFYRIMSNSGL-SPNSSV 323
G EEA + M N+G PNS +
Sbjct: 720 GLVEEADDMFSSMENAGCEQPNSQL 744
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L Q +TE A EM V F+ ++ + +E R ++ T G
Sbjct: 220 LCDQGGVTE-AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCM 277
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY +++ C + A ++L + N F ++ G E K + ++
Sbjct: 278 PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATEL 333
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G + Y++ +H LCKL + A LL EM KG PN VTY+ ++ FCK
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +++ + MS GL+ NS Y M+Y +CK G + A+G +E ++G P+ +
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+++ L ++ EA+ + L++E N T+N I
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD TY+ ++ C+ SA +L EM++K PN ++ ++ F K ++D
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G+ YN I++LCK + EA L+ EM S+G P+ +Y+ IY
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C + EEA+ + + G+ N Y T+++ + + G ++ A+ KE I G +
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ L+ + V + L+ + EK K
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 553
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P++ TY V+ +FC++ ++L EM K + N+ + ++ K+ + ++
Sbjct: 376 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 435
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M G + YN I+ LC + EA+ + + +L +G+ N +TY+ I+
Sbjct: 436 MGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHA 495
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+DG +++A + + M G S + Y ++ MCK G+ + +L +E KG PN
Sbjct: 496 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 555
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ L++ L +V +A EL ++ + ++ T+N + GL
Sbjct: 556 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +SI+++G + AVR +EM++ +V + +L + + + R +E
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT-RALLE 405
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G+ + YN +I A C+ A ++ EM + P+ S+ ++ E
Sbjct: 406 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ E+ + + + G+ + YN IH+L + + +A L EM+ G + V+Y+
Sbjct: 466 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 525
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I CKDGN + + M+ G+ PN+ Y ++ +CK AL K+ + +
Sbjct: 526 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
G P+ T +L+ GL + A L+ L E ++ T+N
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 630
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 69 PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM 125
P++H +SI ++ L + + L E++ + P++ HS + + M
Sbjct: 344 PDAH----TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS---FCKNGM 396
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ +EM L + +N ++ AL E + E ++ G PD+ +YN
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYN 455
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A + + + + N ++ ++ ++ +++D ++ + M +
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 515
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I ++CK + LL+EM KG+KPN+V+Y+ I CK+ +A
Sbjct: 516 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 575
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ + M N GL+P+ Y T++ +CK G AL ++ + P+ T L++
Sbjct: 576 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M V + LL L + E + + P+ ++ +N VI
Sbjct: 264 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-----NVVLFNTVI 318
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ A + M K +P+A ++ L+ G K + ++L+ ME+ G
Sbjct: 319 GGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 378
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y + +HS CK + +ALL+EM +KG+ NS Y+ IY CKDG +EA
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + G +P+ Y T++Y +C E A + + +G V N T +++ L
Sbjct: 439 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 498
Query: 369 ASK----VSEAKELI 379
+ V AKE+I
Sbjct: 499 DGRWQDAVRLAKEMI 513
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNA 150
G+ Q + PD+ +++ I+Y N E A F+ + E + + +N
Sbjct: 437 GLIQEMRSQGCNPDIC-----SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ AL +++ R+ E +G D+ +YN +IKA C+ + + +L EM K
Sbjct: 492 IIHALLRDGRWQDAVRLAKEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
IKPN S+ L++ KE + D ++ + M G+ + YN I+ LCK+ A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSVYFTM-- 327
LL+++ ++ + P+ +TY+ I CK ++A R M+ + + +
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 670
Query: 328 ----VYFMCKGGDYETALGFCKESIAKG 351
+Y KG D++ +LG K S G
Sbjct: 671 KNFKLYLHTKGDDFQHSLGCVKPSCPAG 698
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYK 228
+ P+ +G++P +YN V+ + + A ++ M R + P +FG +
Sbjct: 128 QLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCR 187
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ ++ +L+ M R+G +Y IH+LC EA LL+EML G + T
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
+ + G C G EA + M G P Y ++ +C+ + A
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML---- 303
Query: 349 AKGWVP--NFTTMKSLVTGLAGASKVSEAKEL 378
G VP N +++ G K++EA EL
Sbjct: 304 --GRVPELNVVLFNTVIGGCLAEGKLAEATEL 333
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 36/258 (13%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ TY +I+A C S A +L EM + KP+ ++ LV G KE + ++ K
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP-------------- 284
L M YG + V +N+ + S+C + +A+ LL EM+ KG P
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 285 ---------------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
NS++Y+ ++GFCK+ + A ++ IM + G P+
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y TM+ +CK G + A+ + +KG P T +++ GL+ K +A EL+ ++
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 384 EKFTK-NVDTWNEIEAGL 400
K K +V T++ + AGL
Sbjct: 254 GKGLKPDVITYSSLIAGL 271
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 157/368 (42%), Gaps = 48/368 (13%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQA 123
L E + D + ++I I + + L+E+ +R PD+ + + G+
Sbjct: 8 LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGR- 66
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A++ M + + +V N +L ++ + + +++ E + G P + T
Sbjct: 67 --LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK-GCSPSVVT 123
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C A IL +M PN+ S+ L+ GF KE+K + + L++M
Sbjct: 124 FNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMV 183
Query: 244 RYGMKSGVSMYNVRIHSLCK-----------------------------------LRKCA 268
G + YN + +LCK + K
Sbjct: 184 SRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTD 243
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A LL EM KG+KP+ +TYS I G ++G EEA KF+ + G+ PN+ Y +++
Sbjct: 244 QAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIM 303
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLV 382
+ +CK + A+ F I+KG P + L+ G+A EA EL+ G+V
Sbjct: 304 FGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363
Query: 383 KEKFTKNV 390
K+ + V
Sbjct: 364 KKSSAEQV 371
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+R + M + +V +N ++ L + E +F E GI P++ TYN +I
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAK-GISPNVSTYNSII 256
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S+ +++ EM I PN F LV KE + V+ +M + G++
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y + C + EA + D M+ KG PN ++YS I G+CK ++A
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYL 376
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M L PN Y T+++ +C G A+ E +A G +P+ T + L+ L
Sbjct: 377 FEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCK 436
Query: 369 ASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ +A ++ ++ ++ ++N + G+
Sbjct: 437 TRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 15/269 (5%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLAL------TIAKDYKEVKRVFI 169
I++G +E H EM + K+ +V F L+ AL TIA D V V I
Sbjct: 255 IIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHD---VVDVMI 311
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+ G++PD+ TY ++ C S+ A + M RK PN S+ L+ G+ K
Sbjct: 312 Q----RGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKI 367
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
++ + + + M + + + YN IH LC + + +A AL EM++ G P+ VTY
Sbjct: 368 QRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTY 427
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ CK + ++A + + S L+P+ Y ++ MC+ G+ E A +
Sbjct: 428 RILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSS 487
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
KG P+ T ++ GL ++EA +L
Sbjct: 488 KGLHPDVWTYTIMINGLCLQGLLAEATKL 516
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 123/265 (46%), Gaps = 2/265 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F EM + +V +N+++ L ++K V + E + I P++ + ++
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS-KIMPNVVIFTTLV 291
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C+ + A+ ++ M ++ ++P+ ++ AL+ G + ++ +KV M R G
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I+ CK+++ +A L +EM + + PN VTY+ I+G C G +A
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M SG P+ Y ++ ++CK + A+ K P+ + ++ G+
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471
Query: 369 ASKVSEAKELIGLVKEKFTKNVDTW 393
++ A +L + K + D W
Sbjct: 472 VGELEAAGDLFSSLSSK-GLHPDVW 495
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 4/264 (1%)
Query: 140 KLRHS--VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
KL H F L+ L + E +F + G +P+ TY +I C+ +S
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE-GFQPNGVTYGTLIHGLCKVGNS 195
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+A +L M +K+ +PN ++ ++ +K+ + + + M G+ VS YN
Sbjct: 196 RAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSI 255
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
IH LCK + L++EM+ + PN V ++ + CK+G A +M G+
Sbjct: 256 IHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ C + + A + KG PN + +L+ G ++ +A
Sbjct: 316 EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375
Query: 378 LI-GLVKEKFTKNVDTWNEIEAGL 400
L + + + N+ T+N + GL
Sbjct: 376 LFEEMCQRELVPNIVTYNTLIHGL 399
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 2/277 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ +F M + SV F +L ++ K Y V + + + GI D+ T
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQM-DSLGIPSDVYT 111
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
VI +FC + +S+LA++ + +P+ ++F L+ G E K + + M
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + Y IH LCK+ A LL M+ K +PN +TY+ I KD
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA + M G+SPN S Y ++++ +CK +++ E + +PN +LV
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
L V+ A +++ +++ +V T+ + G
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDG 328
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN +I C A ++ EM P+ ++ L+ K + +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ +E + + YN+ I +C++ + A L + SKG+ P+ TY+ I G C
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCL 506
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA K +R M+ G SP+ Y + + + +A+ +E + +G+ + +T
Sbjct: 507 QGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAST 566
Query: 359 MKSLVTGLAGASKVSEAKELI 379
+ +V L+ K+++
Sbjct: 567 ITLIVEMLSDDGLDQSVKQIL 587
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 55/132 (41%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN VI C + +A + + + K + P+ ++ ++ G + +
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M G YN+ + + A LL EML +G ++ T + +
Sbjct: 515 KLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574
Query: 297 CKDGNFEEAKKF 308
DG + K+
Sbjct: 575 SDDGLDQSVKQI 586
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 11/172 (6%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANM--TEH 128
D + + I ++ L + + + L+ ++ PD+Q +++I++ G + E
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQ-----SYNIVIDGMCRVGELEA 477
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + L V + ++ L + E ++F E T G PD TYN +
Sbjct: 478 AGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM-NTDGCSPDDCTYNLIT 536
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ F ++++ SA +L EM + +AS+ +V + + V ++L
Sbjct: 537 RGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 144/295 (48%), Gaps = 13/295 (4%)
Query: 85 LSEAN-YFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKL 141
+SEA YF+ + T+ D+ E ++I++ G A + AVR++K++ E +
Sbjct: 496 ISEAQMYFDSV--------TKSDVAEEII-LYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 546
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
++ FN+L+ E ++ ++ K +G+ P TY ++ +CE D S +
Sbjct: 547 SPTIVTFNSLIYGFCKKGKLAEAVKL-LDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L EM+ K+IKP ++ +V G KE + + ++L+ M G+ YN I S
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK +A L ++ML ++P+ VTY+ I G C GN ++A + + + +
Sbjct: 666 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 725
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
Y T++ C GD + AL F + + +G+ + +++ L + +++AK
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAK 780
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 14/293 (4%)
Query: 105 PDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PDL ++I++ G M E + + ++M L+ S+ + LL +L +
Sbjct: 373 PDLV-----TYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + E + G+KPDL TY+ +I C+ A + EM K I PN+ A+
Sbjct: 428 EAVILLHEM-EVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAI 486
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
++G +++ + + + + + +YN+ I KL EA +++ KG+
Sbjct: 487 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 546
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
P VT++ IYGFCK G EA K + GL P S Y T++ C+ GD +
Sbjct: 547 SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD 606
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
E AK P T +V GL ++ E+ +L+ GL ++ T N
Sbjct: 607 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYN 659
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 18/286 (6%)
Query: 105 PDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNAL-----LLALTI 157
PD+ ++++I+L+G A E A+ +M+ H + + +N L +L L I
Sbjct: 303 PDV-----YSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL-I 356
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ +K V+R+ + G+ PDL TY +I C+ + ++ + +M + +K +
Sbjct: 357 SGAWKVVQRMLLN-----GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L++ K + ++ +L ME G+K + Y+V IH LCK EA L +EM
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM 471
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
SK + PNS S I G + G EA+ ++ ++ S ++ +Y M+ K G+
Sbjct: 472 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
A+ K+ I KG P T SL+ G K++EA +L+ +K
Sbjct: 532 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKD-YKEVKRVFIEFPKTY 175
Y +A M A+ +M L+ S+ +N+LL L I D Y E+K
Sbjct: 178 YSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIK--------AS 229
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ + T +I C S A + L E + P+ SF AL++GF K +
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
MM +YG+ V YN+ +H LC EA ++M + G++P+ VTY+ G
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F G A K + M +GL+P+ Y ++ C+ G+ E + ++ +++G +
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409
Query: 356 FTTMKSLVTGLAGASKVSEA------KELIGLVKEKFTKNV 390
T L++ L + ++ EA E+IGL + T +V
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 8/290 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+E + +PDL +S++++G + E A+ ++EM ++ + +A++ L
Sbjct: 436 MEVIGLKPDLL-----TYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
E + F K+ + ++ YN +I + + + A ++ K I P
Sbjct: 491 FEKGAISEAQMYFDSVTKS-DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 549
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+F +L+ GF K+ K + K+L ++ +G+ Y ++ C+ +L
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLH 609
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM +K +KP +TY+ + G CK+G E+ + + M GL P+ Y T++ CK
Sbjct: 610 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 669
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
D + A + + P+ T L+ GL + +A L+ ++++
Sbjct: 670 DLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 719
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD TYN VI++FC++ D A+ + +M + S++P+ ++ L+ G +D
Sbjct: 650 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 709
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++L ++ ++ Y I + C A +M+ +G + + YS I
Sbjct: 710 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 769
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
CK +AK F+ +M G+ P+ + M+ + GD + I G +P
Sbjct: 770 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 17/269 (6%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ + L P S + ++ +N E + + L E++ + + ++
Sbjct: 571 KLLDTIKVHGLVPTS----VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI--TYT 624
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
+++ G + +V+ K M L +N ++ + A D ++ ++ + +
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQ- 683
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+ ++P TYN +I C + A +L + +SI+ ++ ++ + D
Sbjct: 684 HSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAK---GD 740
Query: 235 VNKVL----QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
V L QM+ER G + + Y+ I+ LCK +AK ML+ G+ P+
Sbjct: 741 VQNALVFFHQMVER-GFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 799
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
+ F + G+ + + +M GL P
Sbjct: 800 VMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
I +LS A F + L EL+ +E I YG A+ + A++TF + +
Sbjct: 93 IYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGV 152
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
R SV + N LL AL + V +F +G+ P++ T N +IKA C+ +D A
Sbjct: 153 RRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGAR 212
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+ EM I PN ++ ++ G+ +V + +G + Y + +
Sbjct: 213 KVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGY 272
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
K + +A ++DEM G++PN +TY I G+CK+ EA M PNS
Sbjct: 273 VKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNS 332
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++ ++ +C G + A ++ + K P+ +L+ L + EA++L
Sbjct: 333 ALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNE 392
Query: 382 VKEKFTKNVDTWNEIEAGL 400
+ ++ T+N + AG+
Sbjct: 393 FERGTISSLLTYNTLIAGM 411
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 38/349 (10%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHK 140
+N L + N F+ + + K++ + F + +I + N E A + F EM
Sbjct: 163 LNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMG 222
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+ +V + +L D KRVF E +G PD TY ++ + + + A
Sbjct: 223 IVPNVVTYTTILGGYVSRGDMIGAKRVFGEL-FDHGWLPDATTYTILMDGYVKQGRFTDA 281
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQMMERY-------------- 245
++ EM+ ++PN ++G ++ G+ KE K E +N + M+E+
Sbjct: 282 VKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDV 341
Query: 246 -----GMKSGVSMY---------------NVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+K M+ + IH LCK EA+ L +E +G +
Sbjct: 342 LCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNE-FERGTISS 400
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I G C+ G EA + + M G PN Y ++ K G + + +
Sbjct: 401 LLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVE 460
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
E + KG + N +T LV GL K E ++ ++ + WN
Sbjct: 461 EMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVDFKAWN 509
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD Y +I ++ A S+ + M K + ++ L+AGF ++++ +
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++LQ M+ G++ V YN + CK A LL +M+ G +P+ +T+ ++G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G +EA + R M SG+ PN+ +Y T++ F+CK GD + A+ E K N
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
TT +L+ GL + +A EL+ ++E+
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREE 557
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY+ ++ A +++ A + E + P+A + +++G + + ED + M
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G K YN+ I C+ ++ EA LL EM G++P+ TY+ + G CK G+F
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ M + G P+ + T+V+ CK G + AL + G PN +L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ L V A EL +KEK NV T+N + GL
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G K D YN +I FC AY +L EM I+P+ ++ L++G K +
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V+++L M G + V + +H CK+ K EA +L M G+ PN+V Y+
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK G+ + A + + M + N + + ++ + E A + +
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 353 VPNFTTMKSLVTGL 366
P++ T+ L+ L
Sbjct: 560 FPDYVTVDVLMEWL 573
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 24/383 (6%)
Query: 33 KTPLTSKDKTRAALT-LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYF 91
+ P S A L+ LL S+PE A+ D AF+ + L+
Sbjct: 93 RVPPPSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDV 152
Query: 92 NGISQYLEELK----TRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKL--RH 143
G+++ ++ RPD+ + I++ G +A A+R M L R
Sbjct: 153 PGMARIYALMQGCASVRPDVVT-----YGILVNGLCKAGRVGDALRVLDGMSRQDLDIRP 207
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIE--FPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
V N ++ L + +E F+E +G P+ TYN +I AFC + S AY
Sbjct: 208 DVVTLNTVVDGLCKSGRVQEA-LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM----KSGVSMYNVR 257
++ +M+ + + N + +V G + + + + E+ + K Y+
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTL 324
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ +L A L E +S+G P+++ Y I G + G E+A M +G
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
++ Y ++ C+ A +E G P+ T +L++G A + E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444
Query: 378 LIG-LVKEKFTKNVDTWNEIEAG 399
L+G ++ + +V T+ + G
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHG 467
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV +M + ++ F L+ L KE +F E + P+ T+ ++
Sbjct: 140 AVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM-PNTVTFTILV 198
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + M K ++PN ++ AL+ G+ + D +KV ++M G
Sbjct: 199 DVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCA 258
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y++ I+ CK R+ EAKALL +M K + PN+VTY+ + G C + EA++
Sbjct: 259 PSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQEL 318
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M +SG+ PN Y ++ +CK G E AL + P+ L+ G+
Sbjct: 319 FKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFI 378
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
A K+ AKEL L +V T+N + GL
Sbjct: 379 AGKLEVAKELFSKLFANGIRPSVRTYNIMIKGL 411
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 148/354 (41%), Gaps = 19/354 (5%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHA 114
++ +C L +H D +I IN +LS ++ + + +L +PD
Sbjct: 105 VVSLCNQMDLFGVAHND-YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSV-----T 158
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ ++ G N + AV F EM + F L+ L E + VF E
Sbjct: 159 FTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVF-ETM 217
Query: 173 KTYGIKPDLDTYNRVIKAFC---ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
G++P++ TYN ++ +C E +D+S + I M K P+ S+ L+ G+ K
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEI---MVGKGCAPSVHSYSILINGYCKS 274
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ ++ +L M + YN + LC EA+ L +M S GM PN TY
Sbjct: 275 RRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTY 334
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
S + G CK G+ EEA K M L P+ +Y ++ M G E A + A
Sbjct: 335 SILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFA 394
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
G P+ T ++ GL EA +L + + F + ++N I G Q
Sbjct: 395 NGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQ 448
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 2/321 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + F+ IN L + E+ R + N + + + M A F
Sbjct: 155 DSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVF 214
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M E + ++ +NAL+ + + + +VF E G P + +Y+ +I +C+
Sbjct: 215 ETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF-EIMVGKGCAPSVHSYSILINGYCK 273
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A ++L +M K + PN ++ L+ G + ++ + M GM +
Sbjct: 274 SRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRT 333
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y++ + LCK EA LL M + ++P+ V Y+ I G G E AK+ + +
Sbjct: 334 YSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLF 393
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+G+ P+ Y M+ + K G + A ++ G++P+ + ++ G S
Sbjct: 394 ANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPS 453
Query: 374 EAKELIG-LVKEKFTKNVDTW 393
A +LI +V +F+ + T+
Sbjct: 454 TAIQLIDEMVGRRFSADSSTF 474
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F+ M SV +++ L+ ++ E K + + + I P+ TYN ++
Sbjct: 245 ASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELI-PNTVTYNTLM 303
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C +S A + +M + PN ++ L+ G K E+ K+L M+ ++
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ +YN+ I + K AK L ++ + G++P+ TY+ I G K+G +EA K
Sbjct: 364 PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+R M + G P+S Y ++ + D TA+ E + + + + +T K L+
Sbjct: 424 FRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ G + K+++Y V + M+ +G+ N+ I+SLC+L A +
Sbjct: 83 RPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVS 142
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+L +M G++P+SVT++ I G C +G +EA + + M+ PN+ + +V +C
Sbjct: 143 VLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLC 202
Query: 333 KGG-------DYETAL----------------GFC------------KESIAKGWVPNFT 357
K G +ET G+C + + KG P+
Sbjct: 203 KKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVH 262
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ L+ G + ++ EAK L+ + EK N T+N + GL
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 3/253 (1%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N LL L D +V E P GI PD+ TY V+ A+C D A + ++
Sbjct: 197 NILLKGLVGIGDLDAALKVLDEMPG-LGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDII 255
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+P+ + + L+ G+ + +D +++ ME ++ Y+V I + CK K
Sbjct: 256 ASGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPI 315
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA+ + EML G P++ + + C+DG EEA + +R M + P++ V T++
Sbjct: 316 EARDFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLI 375
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFT 387
Y++CK G A E + +G+ P+ T SL++GL ++ EA + +V+ +
Sbjct: 376 YWLCKNGMVREARNLFDE-LERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYE 434
Query: 388 KNVDTWNEIEAGL 400
N T+ + GL
Sbjct: 435 PNAMTYEALIKGL 447
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 122/257 (47%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
SV +FNALL +L A+ + +F P I P+L + N ++K D +A +
Sbjct: 156 SVRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGIGDLDAALKV 215
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L EM I P+ ++ +++ + + E K+ + G + V+MY V I C+
Sbjct: 216 LDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQ 275
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+A ++DEM + ++PN VTYS I CK+ EA+ F R M +G P++++
Sbjct: 276 CGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTAL 335
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+V +C+ G E A + K P+ +L+ L V EA+ L ++
Sbjct: 336 GAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVREARNLFDELE 395
Query: 384 EKFTKNVDTWNEIEAGL 400
F ++ T+N + +GL
Sbjct: 396 RGFKPSLLTYNSLISGL 412
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 39/289 (13%)
Query: 116 SIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I+L G + + A++ EM + V + +L A D + +++F +
Sbjct: 197 NILLKGLVGIGDLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIA 256
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK-- 231
+ G +PD+ Y +I +C+ + A I+ EM+ ++PN ++ ++ KEEK
Sbjct: 257 S-GRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPI 315
Query: 232 ---------------------------------YEDVNKVLQMMERYGMKSGVSMYNVRI 258
E+ ++ + ME+ + + + I
Sbjct: 316 EARDFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLI 375
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ LCK EA+ L DE L +G KP+ +TY+ I G C++ +EA + + M G
Sbjct: 376 YWLCKNGMVREARNLFDE-LERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYE 434
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
PN+ Y ++ +CK G +E +++G P+ + LV L+
Sbjct: 435 PNAMTYEALIKGLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLVDSLS 483
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RPD+ + I Y Q + A R EM+ +++ + ++ ++ A K+ K
Sbjct: 260 RPDVT---MYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEA--CCKEEKP 314
Query: 164 VK-RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
++ R F+ G PD +V+ C+ S AY + M++K++ P+ L
Sbjct: 315 IEARDFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTL 374
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ K + + +ER G K + YN I LC+ + EA + D+M+ +G
Sbjct: 375 IYWLCKNGMVREARNLFDELER-GFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGY 433
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+PN++TY I G CK G E + M + G P+S ++ +V
Sbjct: 434 EPNAMTYEALIKGLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLV 479
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 12/223 (5%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+I++ AA + P + + +S+ I + ++ E+ + + A
Sbjct: 284 RIMDEMEAARVQP----NEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTALGAKV 339
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ + Q +E A + ++ M++ + + L+ L +E + +F E + G
Sbjct: 340 VDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVREARNLFDELER--G 397
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
KP L TYN +I CE+ + A + +M + +PNA ++ AL+ G K K +
Sbjct: 398 FKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEALIKGLCKTGKPNEGA 457
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCK------LRKCAEAKAL 273
V + M G K ++ V + SL + +RK E AL
Sbjct: 458 TVFEEMVSRGCKPSSLLFQVLVDSLSEPRHEDTIRKILETAAL 500
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
M A F E+ E + S+ +N+L+ L ++ +E RV+ + + G +P+ T
Sbjct: 382 GMVREARNLFDEL-ERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVER-GYEPNAMT 439
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMM 242
Y +IK C++ + ++ EM + KP++ F LV E ++ED + K+L+
Sbjct: 440 YEALIKGLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLVDSL-SEPRHEDTIRKILETA 498
Query: 243 ERYG 246
YG
Sbjct: 499 ALYG 502
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L Q +TE A EM V F+ ++ + +E R ++ T G
Sbjct: 204 LCDQGGVTEAAT-LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCM 261
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY +++ C + A ++L + N F ++ G E K + ++
Sbjct: 262 PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATEL 317
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G + Y++ +H LCKL + A LL EM KG PN VTY+ ++ FCK
Sbjct: 318 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 377
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +++ + MS GL+ NS Y M+Y +CK G + A+G +E ++G P+ +
Sbjct: 378 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 437
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+++ L ++ EA+ + L++E N T+N I
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 476
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD TY+ ++ C+ SA +L EM++K PN ++ ++ F K ++D
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 384
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ M G+ YN I++LCK + EA L+ EM S+G P+ +Y+ IY
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 444
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C + EEA+ + + G+ N Y T+++ + + G ++ A+ KE I G +
Sbjct: 445 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 504
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ L+ + V + L+ + EK K
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 537
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P++ TY V+ +FC++ ++L EM K + N+ + ++ K+ + ++
Sbjct: 360 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 419
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M G + YN I+ LC + EA+ + + +L +G+ N +TY+ I+
Sbjct: 420 MGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHA 479
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+DG +++A + + M G S + Y ++ MCK G+ + +L +E KG PN
Sbjct: 480 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 539
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ L++ L +V +A EL ++ + ++ T+N + GL
Sbjct: 540 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +SI+++G + AVR +EM++ +V + +L + + + R +E
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT-RALLE 389
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
G+ + YN +I A C+ A ++ EM + P+ S+ ++ E
Sbjct: 390 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ E+ + + + G+ + YN IH+L + + +A L EM+ G + V+Y+
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I CKDGN + + M+ G+ PN+ Y ++ +CK AL K+ + +
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
G P+ T +L+ GL + A L+ L E ++ T+N
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 614
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 69 PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANM 125
P++H +SI ++ L + + L E++ + P++ HS + + M
Sbjct: 328 PDAH----TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS---FCKNGM 380
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ +EM L + +N ++ AL E + E ++ G PD+ +YN
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYN 439
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C + A + + + + N ++ ++ ++ +++D ++ + M +
Sbjct: 440 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 499
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I ++CK + LL+EM KG+KPN+V+Y+ I CK+ +A
Sbjct: 500 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 559
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ + M N GL+P+ Y T++ +CK G AL ++ + P+ T L++
Sbjct: 560 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M V + LL L + E + + P+ ++ +N VI
Sbjct: 248 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-----NVVLFNTVI 302
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ A + M K +P+A ++ L+ G K + ++L+ ME+ G
Sbjct: 303 GGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 362
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y + +HS CK + +ALL+EM +KG+ NS Y+ IY CKDG +EA
Sbjct: 363 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 422
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + G +P+ Y T++Y +C E A + + +G V N T +++ L
Sbjct: 423 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 482
Query: 369 ASK----VSEAKELI 379
+ V AKE+I
Sbjct: 483 DGRWQDAVRLAKEMI 497
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G PD Y VI A C+ + A ++L EM + ++F +V G + +
Sbjct: 188 HGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE 247
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL-------------------- 274
+++ M G GV Y + LC++R+ EA+A+L
Sbjct: 248 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLA 307
Query: 275 -----------DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ M KG +P++ TYS ++G CK G A + R M G +PN
Sbjct: 308 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVT 367
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +++ CK G ++ +E AKG N ++ L ++ EA +GL++
Sbjct: 368 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA---MGLIQ 424
Query: 384 EKFTKNVD 391
E ++ +
Sbjct: 425 EMRSQGCN 432
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNA 150
G+ Q + PD+ +++ I+Y N E A F+ + E + + +N
Sbjct: 421 GLIQEMRSQGCNPDIC-----SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 475
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ AL +++ R+ E +G D+ +YN +IKA C+ + + +L EM K
Sbjct: 476 IIHALLRDGRWQDAVRLAKEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
IKPN S+ L++ KE + D ++ + M G+ + YN I+ LCK+ A
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 594
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSVYFTM-- 327
LL+++ ++ + P+ +TY+ I CK ++A R M+ + + +
Sbjct: 595 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 654
Query: 328 ----VYFMCKGGDYETALGFCKESIAKG 351
+Y KG D++ +LG K S G
Sbjct: 655 KNFKLYLHTKGDDFQHSLGCVKPSCPAG 682
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 31/213 (14%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P T+ +A C + A ++L M R P+A + ++ + +
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L M G + V+ ++ + +C L + EA L+D M++KG P +TY + G
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 297 CK-------------------------------DGNFEEAKKFYRIMSNSGLSPNSSVYF 325
C+ +G EA + Y M G P++ Y
Sbjct: 275 CRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 334
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+++ +CK G +A+ +E KG+ PN T
Sbjct: 335 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVT 367
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
R + P +FG + + ++ +L+ M R+G +Y IH+LC
Sbjct: 152 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA LL+EML G + T+ + G C G EA + M G P Y ++
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Query: 329 YFMCKGGDYETALGFCKESIAKGWVP--NFTTMKSLVTGLAGASKVSEAKEL 378
+C+ + A G VP N +++ G K++EA EL
Sbjct: 272 QGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATEL 317
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+M+ R + + V +LC+L + EA ALL M G P++V Y I+ C
Sbjct: 148 RMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQ 207
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA M G + + + + +V MC G A + KG +P T
Sbjct: 208 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 267
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
L+ GL + EA+ ++G V E NV +N + G
Sbjct: 268 GFLLQGLCRVRQADEARAMLGRVPE---LNVVLFNTVIGG 304
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ FKEM+ + V +N+L+ L+ A +KEV F+ G PD T+
Sbjct: 1137 KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW-FLNLMVDRGFSPDAFTFTI 1195
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+ A IL M K +P+ ++ L+ G + ED K+ + + G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V YN+ I+ CK +K EA +EM KG+KP++VTY+ I C+ G A+
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + M G S Y ++ +CK G E A+ + PN L+ G+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375
Query: 367 AGASKVSEA 375
A K+ EA
Sbjct: 1376 CRAGKLEEA 1384
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D F+I I+ L + Q LE ++ + PD+ + + L GQ E A
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ---LEDAT 1245
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF-PKTYGIKPDLDTYNRVIK 189
+ F+ + + ++ +V ++N L+ + E R F E PK G+KP TYN +I
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK--GLKPSTVTYNTLIG 1303
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C+S +A + EM S++ L+ G K E+ + Q +++ K
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP 1363
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ ++++ + +C+ K EA DE+ G++P+++ Y+ I G C G EA K
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M G P+S + ++ + K + A+ +E + + P+
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 35/260 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T N +I C + + ++ +P+A + LV G + E D
Sbjct: 976 GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA--------------------------- 268
++ M + G+ Y + I+ LCK RK
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDAL 1095
Query: 269 -------EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
EA + EM+ G+ P+ V YS + G C+ G +EA +F++ M G+S +
Sbjct: 1096 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 1155
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
Y ++++ + + G ++ F + +G+ P+ T L+ GL KV EA++++ L
Sbjct: 1156 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 1215
Query: 382 VKEKFTK-NVDTWNEIEAGL 400
++ K + ++ T+N + GL
Sbjct: 1216 MRHKGKEPDILTYNTLMNGL 1235
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ Y+ ++ C A EM+ + I + ++ +L+ G + +++V
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 1174
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
L +M G + + I LCK K EA+ +L+ M KG +P+ +TY+ + G
Sbjct: 1175 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNG 1234
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G E+A K + +++ G+ N Y ++ CK + A F +E KG P+
Sbjct: 1235 LCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPS 1294
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ L + +V A++L
Sbjct: 1295 TVTYNTLIGALCQSGRVRTAQKL 1317
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D ++ I+ LS A + ++ +L + R PD + G+ + +
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213
Query: 131 RTFKEMDEHKLRH-SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
E+ HK + + +N L+ L + ++ ++F E GIK ++ +YN +I
Sbjct: 1214 ----ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLF-ESLADRGIKLNVFSYNILIN 1268
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+C+ A+ EM K +KP+ ++ L+ + + K+ M+ G
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+S Y V + LCK EA L + KPN +S + G C+ G EEA K +
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 1388
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+S +GL P++ Y ++ +C G A+ + KG +P+ T ++ L
Sbjct: 1389 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 1448
Query: 370 SKVSEAKELI 379
+++ EA +L+
Sbjct: 1449 NEIHEAIQLL 1458
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 9/298 (3%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
++ILE+ R P D L ++ +N L ++ E L R N ++
Sbjct: 1210 QQILELMRHKGKEP----DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN--VFSY 1263
Query: 116 SIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+I++ Y + + A R F+EM L+ S +N L+ AL + + +++F+E +
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-Q 1322
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T G L TY ++ C++ A + + + KPN F L+ G + K E
Sbjct: 1323 TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 1382
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ K + + G++ YN+ I+ LC +EA LL +M KG P+S+T++ I
Sbjct: 1383 EAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 1442
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
K+ EA + M N SP+ +V ++ + AL ++ KG
Sbjct: 1443 QNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 2/252 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N AV+ F EM + L + L+ L A+ K + + K D+ T
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKAR--KTGLAIKLHEKMKGNCKGDVFT 1087
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I A C+ ++ A + +EM I P+ + +L+ G + + ++ + + ME
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + V YN IH L + E L+ M+ +G P++ T++ I G CK+G
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 1207
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA++ +M + G P+ Y T++ +C G E A + +G N + L+
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267
Query: 364 TGLAGASKVSEA 375
G K+ EA
Sbjct: 1268 NGYCKDQKIDEA 1279
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F EM + S+ F LL A + Y+ V F + + YGI DL ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-YFSQKMELYGISHDLYSFTI 111
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A S+L +M + +P+ +FG+L+ GF + D ++ +M + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +YN I LCK + A LL+EM KG+ + VTY+ + G C G + +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ R M ++P+ + ++ K G+ + A KE I PN T S++ GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 367 AGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
++ +AK+ L+ K NV T+N + +G
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D+ TYN ++ C S S A +L +M ++SI P+ +F AL+ F K+ ++
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M + + YN I+ LC + +AK D M SKG PN VTY+ I G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK +E K ++ MS G + + Y T+++ C+ G AL +++ P+
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 356 FTTMKSLVTGLAGASKVSEA 375
T L+ GL ++ A
Sbjct: 386 IITHCILLHGLCVNGEIESA 405
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ F +LL + + + I K+ G +P++ YN +I C++ + + A +
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L EM++K + + ++ L+ G ++ D ++L+ M + + V + I K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
EA+ L EM+ + PN+VTY+ I G C G +AKK + +M++ G PN
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
Y T++ CK + + + +G+ + T +L+ G K+ A ++ +V
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ T ++ T + GL
Sbjct: 379 SRRVTPDIITHCILLHGL 396
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 3/258 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + + V F AL+ + E + ++ E ++ + P+ TYN +I
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSII 288
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A M K PN ++ L++GF K ++ K+ Q M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + YN IH C++ K A + M+S+ + P+ +T+ ++G C +G E A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ M S Y M++ +CK E A FC+ + +G P+ T ++ GL
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV-EGVKPDARTYTIMILGLC 467
Query: 368 GASKVSEAKELIGLVKEK 385
EA ELI +KE+
Sbjct: 468 KNGPRREADELIRRMKEE 485
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D ++ F S A+++ EM P+ F L+ +YE V Q
Sbjct: 37 DYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQK 96
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME YG+ + + + IH C+ + + A ++L +M+ G +P+ VT+ ++GFC
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+A +M SG PN VY T++ +CK G+ AL E KG + T +
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
L+TGL + + S+A ++ ++K +V T+ +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 1/189 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +TF M +V +N L+ + E ++F + G D+ TYN +I
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF-QRMSCEGFNADIFTYNTLI 358
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ A I M + + P+ + L+ G + E M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
G+ YN+ IH LCK K +A L + +G+KP++ TY+ I G CK+G EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 309 YRIMSNSGL 317
R M G+
Sbjct: 479 IRRMKEEGI 487
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK + +L L K +K V + E + G
Sbjct: 60 ITXYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILEC-G 118
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ SF L+ G+ + ++
Sbjct: 119 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 178
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 179 RLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 238
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T+ Y +CK GD + A E KG P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDK 298
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 299 ITYTTLIDGCCKEGDMETAFE 319
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 142 AQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHAS-GVQPDVYTYSVLI 200
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 201 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 260
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN + LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ E A +
Sbjct: 261 PDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEH 320
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + VY ++ +C+ G A +E ++ G PN T ++
Sbjct: 321 QKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCK 380
Query: 369 ASKVSEAKELI 379
V +L+
Sbjct: 381 KGDVWTGSKLL 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN + C+ D A+ ++ EM K +KP+ ++ L+ G KE E
Sbjct: 259 LSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAF 318
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ +Y I LC+ + +A+ +L EMLS G+KPN TY+ I F
Sbjct: 319 EHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEF 378
Query: 297 CKDGNFEEAKKFYRIMS 313
CK G+ K + M
Sbjct: 379 CKKGDVWTGSKLLKEMQ 395
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ F KE V + ++G++ V +N ++ +L E L + M
Sbjct: 126 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMH 185
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ G++P+ TYS I G CK+ ++A + + M + GL PN + T++ CK G +
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
A+ K+ +++ P+ T +L GL + +A +LI GL +K T
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 300
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFYKE +L+ G + + +N+ +H CK A+++ D + G
Sbjct: 106 LVWGFYKE--------ILEC----GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG 153
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+++ + G+ + G+ +E + M SG+ P+ Y ++ +CK + A
Sbjct: 154 LRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
E + KG VPN T +L+ G +V A E+ ++ + + ++ T+N + GL
Sbjct: 214 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGL 273
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 5/214 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ + P D +S+ IN L + + + ++ +E+ + + N I + +
Sbjct: 186 ASGVQP----DVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 241
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A+ +K+M L + +N L L D K+ + E G+KPD T
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMK-GLKPDKIT 300
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D +A+ M +++I+ + + AL++G +E + D K+L+ M
Sbjct: 301 YTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 360
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
G+K Y + I+ CK LL EM
Sbjct: 361 SVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
++ Y ++ A++ F+ +HK+ +L L + ++ V + E + G
Sbjct: 73 MLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
P L +N ++ FC+ + A + + + S++P+ SF L+ G+ + ++
Sbjct: 132 YPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K EA +L+EML G+ PN VT++ I G
Sbjct: 192 RLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + G P+ Y T++Y +C+ GD A +E I KG P+
Sbjct: 252 CKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ T G++PD+ TY+ +I
Sbjct: 155 AQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAT-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A +L EM + PN +F L+ G K K + ++ + M G
Sbjct: 214 NGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFL 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LC+ +A+ L++EM+ KG+KP+ +TY+ I G CK+G+ E
Sbjct: 274 PDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFEL 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M GL P++ Y ++ CK
Sbjct: 334 RKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD +TA +E G VP T
Sbjct: 394 TGDVKTASKLLREMQRNGPVPGVVT 418
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F EM + S+ F LL A + Y+ V F + + YGI DL ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-YFSQKMELYGISHDLYSFTI 111
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A S+L +M + +P+ +FG+L+ GF + D ++ +M + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +YN I LCK + A LL+EM KG+ + VTY+ + G C G + +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ R M ++P+ + ++ K G+ + A KE I PN T S++ GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 367 AGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
++ +AK+ L+ K NV T+N + +G
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N + AV MD +V +N ++ L +D VF K GI+
Sbjct: 684 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRA 742
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN +I S + A +L +M ++ I PN F AL+ F KE + +
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + V YN I+ C +AK + D M+SKG P+ VTY+ I GFCK
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 862
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K + M+ GL ++ Y T+++ C+ G A + G P+ T
Sbjct: 863 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 922
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ L K+ +A ++ L K + ++ T+N I GL
Sbjct: 923 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 13/367 (3%)
Query: 39 KDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
K R LL+ +NPE L + A + +RL N+L + + S +
Sbjct: 539 KGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR-----NELHCIKFDDAFSLFC 593
Query: 99 EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
E L++RP F + + + N + + + +M+ + H + +F L+
Sbjct: 594 EMLQSRPIPSIVDF-TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 652
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + K G +P + T ++ FC+ + A S++ MD PN
Sbjct: 653 SRLSLALALLGKMMKL-GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 711
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++ G K + +V ME+ G+++ YN I L + +A LL +M+
Sbjct: 712 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 771
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + PN + ++ I F K+GN EA+ Y+ M + PN Y +++ C G
Sbjct: 772 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 831
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDT 392
A ++KG P+ T +L+TG + +V + +L GLV + FT N
Sbjct: 832 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 891
Query: 393 WNEIEAG 399
+AG
Sbjct: 892 HGYCQAG 898
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 1/282 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ LS + + ++ L ++ R N F I + + A +
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM + +V +N+L+ I + K +F + + G PD+ TYN +I FC+
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCK 861
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + EM + + +A ++ L+ G+ + K KV M G+ +
Sbjct: 862 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 921
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LC K +A +++++ M + +TY+ I G C+ +EA +R ++
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
G+ P++ Y TM+ +C+ G A C+ G++P+
Sbjct: 982 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D+ TYN ++ C S S A +L +M ++SI P+ +F AL+ F K+ ++
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M + + YN I+ LC + +AK D M SKG PN VTY+ I G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK +E K ++ MS G + + Y T+++ C+ G AL +++ P+
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 356 FTTMKSLVTGLAGASKVSEA 375
T L+ GL ++ A
Sbjct: 386 IITHCILLHGLCVNGEIESA 405
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A+ F M++ +R +N L+ L+ + + + R+ + K I P++ + +
Sbjct: 727 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTAL 785
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I F + + A ++ EM R+S+ PN ++ +L+ GF D + +M G
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V YN I CK ++ + L EM +G+ ++ TY+ I+G+C+ G A+K
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M + G+SP+ Y ++ +C G E AL ++ + T ++ GL
Sbjct: 906 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965
Query: 368 GASKVSEA 375
K+ EA
Sbjct: 966 RTDKLKEA 973
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ F +LL + + + I K+ G +P++ YN +I C++ + + A +
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L EM++K + + ++ L+ G ++ D ++L+ M + + V + I K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
EA+ L EM+ + PN+VTY+ I G C G +AKK + +M++ G PN
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
Y T++ CK + + + +G+ + T +L+ G K+ A ++ +V
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ T ++ T + GL
Sbjct: 379 SRRVTPDIITHCILLHGL 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 3/258 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + + V F AL+ + E + ++ E ++ + P+ TYN +I
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSII 288
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A M K PN ++ L++GF K ++ K+ Q M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + YN IH C++ K A + M+S+ + P+ +T+ ++G C +G E A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ M S Y M++ +CK E A FC+ + +G P+ T ++ GL
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV-EGVKPDARTYTIMILGLC 467
Query: 368 GASKVSEAKELIGLVKEK 385
EA ELI +KE+
Sbjct: 468 KNGPRREADELIRRMKEE 485
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F S A+++ EM P+ F L+ +YE V Q ME YG+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ + + IH C+ + + A ++L +M+ G +P+ VT+ ++GFC +A
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+M SG PN VY T++ +CK G+ AL E KG + T +L+TGL +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 370 SKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ S+A ++ ++K +V T+ +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTAL 252
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + K+ +V F AL+ + E + ++ E + + P++ TYN +I
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLI 821
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K P+ ++ L+ GF K ++ ED K+ M G+
Sbjct: 822 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN IH C+ K A+ + + M+ G+ P+ VTY+ + C +G E+A
Sbjct: 882 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 941
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ S + + Y ++ +C+ + A + KG P+ ++++GL
Sbjct: 942 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001
Query: 369 ASKVSEAKELIGLVKE 384
EA +L +KE
Sbjct: 1002 KGLQREADKLCRRMKE 1017
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V +N L+ +K ++ ++F E TY G+ D TYN +I +C++ + A +
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEM--TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M + P+ ++ L+ K E +++ +++ M + YN+ I LC+
Sbjct: 907 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K EA L + KG+KP+++ Y I G C+ G EA K R M G P+ +
Sbjct: 967 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026
Query: 324 Y 324
Y
Sbjct: 1027 Y 1027
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 1/189 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +TF M +V +N L+ + E ++F + G D+ TYN +I
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF-QRMSCEGFNADIFTYNTLI 358
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ A I M + + P+ + L+ G + E M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
G+ YN+ IH LCK K +A L + +G+KP++ TY+ I G CK+G EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 309 YRIMSNSGL 317
R M G+
Sbjct: 479 IRRMKEEGI 487
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA A + F M + + + +N LL L E V +E + +
Sbjct: 894 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC-NNGKIEKALVMVEDLQKSEMDV 952
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I+ C + A+ + + RK +KP+A ++ +++G ++ + +K+
Sbjct: 953 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 1012
Query: 240 QMMERYGMKSGVSMYN 255
+ M+ G +Y+
Sbjct: 1013 RRMKEDGFMPSERIYD 1028
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+I Y ++ AV+ F+ +HK+R +L L + +K V + E + G
Sbjct: 73 MIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N +++ FC+ + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G + V Y++ I+ LCK K EA L +EML G+ PN VT++ I+G
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+ + A + Y+ M + GLSP+ Y T++Y +CK G+ + E I G P+
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKEL 378
+ +L+ G + A EL
Sbjct: 312 ISYTTLIDGSCKEGDLEIALEL 333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ + + + VF K +G++P + ++N +I +
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITK-WGLRPSVVSFNTLINGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ D + + + M +P+ ++ L+ G KE K ++ N++ M G+
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ IH CK K A + +MLS+G+ P+ +TY+ IYG CK G ++ M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+GL P+ Y T++ CK GD E AL + I + + +L++ L +
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRA 362
Query: 373 SEAKELI 379
+A++++
Sbjct: 363 GDAEKML 369
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G +PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHAS-GAQPDVYTYSILI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ A + EM + PN +F L+ G K EK + ++ + M G+
Sbjct: 214 NGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK + + L+DEM+ G+KP+ ++Y+ I G CK+G+ E
Sbjct: 274 PDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALEL 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 334 RNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
D +TA +E G VP T
Sbjct: 394 KRDSKTASKLLREMQRDGPVPGVVT 418
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 7/283 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L+E PD+ H + G + AV+ F+ M+ +++ + +N ++ L
Sbjct: 88 LDEFSVAPDVYIFNVLIHGLFKDGNP---DQAVKLFENMESSRVKPEIVTYNTVISGLCK 144
Query: 158 AKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
+ + ++ + + E + G PD+ TYN +I AF +S A + +M I P+
Sbjct: 145 SGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDV 204
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
+ LV+G K+ E+ ++L M+ G V YN IH+LC K EA +L
Sbjct: 205 LTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKT 264
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M P+ VT++ + GFCK G A + M + P+ Y +V +C+ G
Sbjct: 265 M---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ A +E + +G++P+ SLV GL + ++ EA +L+
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 10/308 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ IN A+ + E++K PD+ I G E A+
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGD---VEEAL 224
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
M V +N+++ AL +A E + KT PDL T+N ++
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL----KTMSCSPDLVTFNTLLDG 280
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC++ A +L EM R++I P+ ++ LV G + + + +L+ + R G
Sbjct: 281 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 340
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y + LCK + EA L+ EM +G + V YS + G+C+ GN +A++
Sbjct: 341 VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA 400
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + + P Y ++ + K G A+ + +A+G+VP+ T +L+ GL A+
Sbjct: 401 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 460
Query: 371 KVSEAKEL 378
+V EA +L
Sbjct: 461 RVREACDL 468
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 156/364 (42%), Gaps = 21/364 (5%)
Query: 47 TLLKSESNPEKILEIC------RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE 100
TL+ + +I E C +AA + P D L +I ++ + + + L+
Sbjct: 174 TLINAFYRASRIREACAFREKMKAAGINP----DVLTCNILVSGICKDGDVEEALEILDG 229
Query: 101 LKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+K PD+ H++ + G+ ++T + FN LL
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS------CSPDLVTFNTLLDGFCK 283
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
A V E + I PD+ TY ++ C A+ +L E+ R+ P+
Sbjct: 284 AGMLPRALEVLEEMCRE-NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ +LV G K + E+ +K+++ M G ++GV MY+ + C+ +A+ +L EM
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+S M P TY+ + G KDG+ +A + G P+ Y T++ +CK
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEI 396
A E ++G PN T+ S+V GL +V +A L + + +++ NV + +
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 522
Query: 397 EAGL 400
GL
Sbjct: 523 IDGL 526
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 138/321 (42%), Gaps = 12/321 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+IL+ + A P D + ++ I+ L A ++ L+ + PDL +
Sbjct: 225 EILDGMKLAGPVP----DVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVT-----FN 275
Query: 117 IILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
+L G +A M A+ +EM + V + L+ L +V +E
Sbjct: 276 TLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV-QVAFYLLEEIVR 334
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G PD+ Y ++ C+S + A+ ++ EM + + + +LV+G+ +
Sbjct: 335 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHK 394
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L M M + YN+ + L K ++A +L+ +++++G P+ VTY+ I
Sbjct: 395 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 454
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK EA M++ G PN ++V+ +C+ G + A E K P
Sbjct: 455 GLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAP 514
Query: 355 NFTTMKSLVTGLAGASKVSEA 375
N SL+ GL + ++ +A
Sbjct: 515 NVVVYTSLIDGLCKSDRMDDA 535
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 137/308 (44%), Gaps = 8/308 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E + E+CR L D + ++I +N L LEE+ + + + +
Sbjct: 292 EVLEEMCRENILP-----DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+ ++ E A + KEM R V +++L+ A + + + + E +
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM-VSI 405
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-ED 234
+ P L TYN V+ + S A S+++++ + P+ ++ L+ G K + E
Sbjct: 406 NMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 465
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ +M R + V++ +V + LC++ + +A +L+ EM K PN V Y+ I
Sbjct: 466 CDLADEMASRGCFPNDVTLGSV-VFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 524
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK ++A M G++ + Y ++ M GG A+ E +A+G++P
Sbjct: 525 GLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584
Query: 355 NFTTMKSL 362
+ +T K+L
Sbjct: 585 DGSTSKTL 592
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+ + + PD+ +N +I + + A + M+ +KP ++ +++G
Sbjct: 84 FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143
Query: 228 KEEKYEDVNKVLQMMERYGMKSG--VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K E ++L+ M R G KS + YN I++ + + EA A ++M + G+ P+
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+T + + G CKDG+ EEA + M +G P+ Y ++++ +C G A K
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
P+ T +L+ G A + A E++ + +E +V T+ + GL
Sbjct: 264 TMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 316
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 37/241 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G K D+ +YN ++ +S + ++ PN +F L+ G K +
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L+ ++ + + V ++NV IH L K +A L + M S +KP VTY+ I G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 296 FCKDGNFEEAKK-------------------------FYRI------------MSNSGLS 318
CK GN E+A++ FYR M +G++
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ +V +CK GD E AL G VP+ T S++ L A KV EA E+
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 379 I 379
+
Sbjct: 262 L 262
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E+ G K V YN + L K + ++L G PN VT+ I G CK G
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
A +F R + ++P+ ++ +++ + K G+ + A+ + + P T ++
Sbjct: 79 MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138
Query: 363 VTGLAGASKVSEAKELI 379
++GL + + +A+EL+
Sbjct: 139 ISGLCKSGNLEKARELL 155
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 5/271 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E F+++ + V +++ L+ LT A +E +F K G D
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM-KQQGFALDA 601
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN V+ FC+S AY +L EM K + P +++G+++ G K ++ ++ + +
Sbjct: 602 RAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 661
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ G++ V +Y+ I K+ + EA +L+EM+ KG+ PN T++ + K
Sbjct: 662 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEE 721
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA ++ M SPN+ Y ++ +C+ Y A F +E +G VPN T +
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
++ GLA +++A L E+F N T
Sbjct: 782 MIAGLAKVGNITDACSLF----ERFKANGGT 808
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 138/328 (42%), Gaps = 3/328 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ I L +A + + +++T + + I+ YG A E+A +
Sbjct: 286 DDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLL 345
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++ E SV +FN++L L + E +F K +P+ TYN +I C
Sbjct: 346 DQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD--AEPNSSTYNIIIDMLCM 403
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ AY I EM+ + PN + +V K +K+E ++ + + G
Sbjct: 404 AGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVT 463
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I L K +A L + ML G N V Y+ I F G E+ K ++ M+
Sbjct: 464 YCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMN 523
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G P+ ++ T + + K GD E ++ G++P+ + L+ GL A +
Sbjct: 524 RRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR 583
Query: 374 EAKELIGLVKEK-FTKNVDTWNEIEAGL 400
E + +K++ F + +N + G
Sbjct: 584 ETSSIFHAMKQQGFALDARAYNAVVDGF 611
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 165/409 (40%), Gaps = 22/409 (5%)
Query: 13 LFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTL---LKSESNPEK-----ILEICRA 64
L Q R S + + T L K K ALTL +K ++ P I+++
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCM 403
Query: 65 AALTPESHLDR------------LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
A E+++ R L +I +++L +A F + E R N
Sbjct: 404 AGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVT 463
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ I G+ + A R F+ M + + + +L+ + ++ ++F E
Sbjct: 464 YCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMN 523
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G +PDL N + ++ D +I ++ P+ S+ L+ G K +
Sbjct: 524 RR-GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQA 582
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + + M++ G YN + CK K +A +L+EM K + P TY
Sbjct: 583 RETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G K +EA + + G+ N VY +++ K G + A +E + KG
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
PN T SL+ L A +++EA +KE K + N T++ + GL
Sbjct: 703 TPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 142/322 (44%), Gaps = 3/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++SI I+ L++A S +K + + R + + + ++ + A
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM ++ +V + +++ L E +F E K+ GI+ ++ Y+ +I F +
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLF-EEAKSKGIELNVIVYSSLIDGFGK 683
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
AY IL EM +K + PN ++ +L+ K E+ + Q M+
Sbjct: 684 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 743
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y++ I+ LC+++K +A EM +G+ PN VTY+ I G K GN +A +
Sbjct: 744 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFK 803
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+G +P+++ + ++ M A +E+ KG N SL+ L A +
Sbjct: 804 ANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLE 863
Query: 374 EAKELIGLVKEKFTKNVDTWNE 395
+A ++G E ++ W E
Sbjct: 864 QAA-VVGF-GENTVRHFFQWTE 883
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L+ AL + + +RV I + +P Y +I A E+ A +L +M
Sbjct: 153 LVSALVRTRRLDDAERV-IAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEV 211
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ F LV +E + E ++ ++ ++ + +YNV I K A
Sbjct: 212 GYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 271
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
E+ S+G+KP+ V+Y+ I+ CK G EA++ + M P + Y TM+
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
G +E A + +G +P+ + S++T L KV EA L +K+ N
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNS 391
Query: 391 DTWNEI 396
T+N I
Sbjct: 392 STYNII 397
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 38/376 (10%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+AA P+S + L+ S+ ++ ++ Q L+E+ N + + Y +
Sbjct: 132 QAATSCPDS-VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTR 190
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ K M+ + +VG + L+ L+ A+D +V+ VF E K+ + D+
Sbjct: 191 EKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM-KSKNLSGDVY 249
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-------- 234
Y+ VI A+C + + A + E I+PN ++GAL+ GF K + E
Sbjct: 250 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 309
Query: 235 ------------------------VNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKC 267
V+K L++ ME+ G++ V YN L + +
Sbjct: 310 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EAK LL M+ KG++PN V+Y+ I C +G+ EA++ +R M+ +G P+ Y M
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ K G A F KE KG VP+ + +LV G KV A L +K++ +
Sbjct: 430 MDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489
Query: 388 K-NVDTWNEIEAGLPQ 402
K N+ + + +GL +
Sbjct: 490 KPNLVAYTALISGLAK 505
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 116/275 (42%), Gaps = 11/275 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++ + C + P H + IN + + +++ R N+
Sbjct: 269 EVFDECVGNGIEPNEH----TYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK---RVFIEFPK 173
I Y + NM + A+ M++ + V +N L L A E K R+ IE
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE--- 381
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G++P+ +Y +I C D A + EM +P+ ++ ++ G+ K+
Sbjct: 382 -KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + ME+ G+ + Y +H C K A L +EM +G KPN V Y+ I
Sbjct: 441 EAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 500
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G K+G EEA + Y M GL+P+ ++Y +V
Sbjct: 501 SGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+ D+ TYN + ++ A ++L M K ++PN S+ L++
Sbjct: 348 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS----------- 396
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
IH C EA+ L EM G +P+ VTY+ + G
Sbjct: 397 ----------------------IH--CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDG 432
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K G+ EA++F + M GL P+ Y +V+ C G + AL +E +G PN
Sbjct: 433 YIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPN 492
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
+L++GLA + EA +L
Sbjct: 493 LVAYTALISGLAKEGRSEEAFQL 515
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 92/156 (58%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++ G++ D+ TY +I+ C++++ A ++ EM I+PN + +L+ G+ K ++
Sbjct: 21 RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRW 80
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
EDV KV M G++ V MY I SLCK+ K +A ++D M+ +G++PN VTY+
Sbjct: 81 EDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL 140
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
I CK+G+ +EA + MS G++P+ Y T++
Sbjct: 141 INCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 176
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L+ M G+++ V Y I LC + +A L+ EM G++PN V YS + G+C
Sbjct: 16 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 75
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G +E+ K + MS G+ P+ +Y ++ +CK G + A G + +G PN
Sbjct: 76 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 135
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK----NVDTWNEIEAGL 400
T L+ + K KE IG++K+ K +V T+N + GL
Sbjct: 136 TYNVLINCMC---KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 179
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ +LC R +A LL M S G++ + VTY I G C ++A + M SG+
Sbjct: 1 MRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGI 60
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
PN VY +++ CK G +E E KG P+ L+ L K +A
Sbjct: 61 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 120
Query: 378 LIG-LVKEKFTKNVDTWN 394
++ +V+ NV T+N
Sbjct: 121 VMDMMVRRGLEPNVVTYN 138
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A + F EM E + ++ +N L+ L E +V ++ K+ GI P+L TYN
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV-VDQMKSDGINPNLITYN 342
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A S+ ++ + + P+ ++ LV+GF ++ K+++ ME
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K Y + I + + +A L M G+ P+ TYS I+GFC G EA
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ ++ M PN +Y TM+ CK G AL KE K PN + + ++
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 366 LAGASKVSEAKELI 379
L K EA+ L+
Sbjct: 523 LCKERKSKEAERLV 536
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 1/201 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K+ G+ P L TYN ++ FC D+S A ++ EM+ + IKP+ ++ L+ F + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E ++ ME G+ V Y+V IH C + EA L M+ K +PN V Y+
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+CK+G+ A K + M L+PN + Y M+ +CK + A ++ I G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 353 VPNFTTMKSLVTGLAGASKVS 373
P+ T++ SL++ S VS
Sbjct: 545 DPS-TSILSLISRAKNDSHVS 564
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+L TYN V+ C+ + A+ + EM + + N ++ L+ G +E K +
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
NKV+ M+ G+ + YN I C + K +A +L ++ S+G+ P+ VTY+ + G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G+ A K + M G+ P+ Y ++ + + E A+ G VP+
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T L+ G +++EA L + EK
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+F ++ K+ V +F L+ A + ++ + IE + +G P++ Y +I
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE-FGFSPNVVIYTTLIDGC 208
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A + EM + + N ++ L+ G +K + ++ + M+ G+ +
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN ++ LCK + +A + DEM +G+ N VTY+ I G C++ EA K
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G++PN Y T++ C G AL C++ ++G P+ T LV+G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 372 VSEAKELIGLVKEKFTK 388
S A +++ ++E+ K
Sbjct: 389 TSGAAKMVKEMEERGIK 405
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 12/308 (3%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
FN + E K++ L ++ I++ G +A E + E+ E +V +
Sbjct: 145 FNQWWSFFNENKSKVVLD---VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIY 201
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
L+ + ++ K +F E K G+ + TY +I ++ + + +M
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ PN ++ ++ K+ + +D +V M G+ + YN I LC+ K
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA ++D+M S G+ PN +TY+ I GFC G +A R + + GLSP+ Y +V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLV 382
C+ GD A KE +G P+ T L+ A + + +A +L +GLV
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 383 KEKFTKNV 390
+ T +V
Sbjct: 441 PDVHTYSV 448
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 57 KILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
K L +CR + L+P + ++I ++ +G ++ ++E++ R ++ +
Sbjct: 356 KALSLCRDLKSRGLSP----SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + +++ E A++ M+E L V ++ L+ I E R+F +
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+P+ YN +I +C+ S A +L EM+ K + PN +S+ ++ KE K +
Sbjct: 472 K-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 234 DVNKVLQMMERYGMKSGVSMYNV 256
+ ++++ M G+ S+ ++
Sbjct: 531 EAERLVEKMIDSGIDPSTSILSL 553
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 167/397 (42%), Gaps = 23/397 (5%)
Query: 22 LATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIA 81
L++ + S + + L K K + LL + +N E +L + T D F
Sbjct: 58 LSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSM 117
Query: 82 INKLSEANYF--------------------NGISQYLEELKTRPDLQNERFHAHSIIL-Y 120
+N+L F + Q L E+ T D + ++++
Sbjct: 118 LNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQL 177
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ +M + EM +R ++ FNA++ L +E + + YG PD
Sbjct: 178 GKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFH-YGACPD 236
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY +I C++ + A+ + M + PN+ ++ AL+ G E + E+ +L+
Sbjct: 237 TFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLE 296
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G++ V Y + I SLC + EA LL +M +G PN TY+ I G +DG
Sbjct: 297 EMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDG 356
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
FE A Y M GL P + Y ++ + G +ETAL + ++ +PN T
Sbjct: 357 KFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYN 416
Query: 361 SLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
++ G + +A + ++K + NV T+N I
Sbjct: 417 VIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 38/344 (11%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++I I+ + Y N + LE +K + +A+ I + + EHA F E
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507
Query: 136 MDEHKLRHSVGAFNALLLA-LTIAKD-------YKEVKRVFIEFPKTY------------ 175
M EH + +V +NA++ LT+AK +K V+ + TY
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567
Query: 176 --------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
G+ P++ TY I C++ +S A+ I EM ++ PN ++ +
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G +E + ED ++L G + V Y + LC +C EA L++ M KG
Sbjct: 628 LIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ Y + G CK+ E A K + M +G P S Y ++ +CK + A
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + K W + L+ GL + + EL+ +++ +
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 4/274 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F+ M H + +N ++ ++ +F + K G P++ TYN
Sbjct: 394 ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA-GPSPNVITYNI 452
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + + ++A +L M +K + ++ L++GF + K E + M +G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I+ + K +A AL +M+ G P+S TY+ I GF K EA+
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
F M GL PN Y + + +CK G A E + + PN T SL+ GL
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632
Query: 367 AGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ +A+ L+ + NVDT+ + GL
Sbjct: 633 CQEGQAEDAERLL---DDGCEPNVDTYTTLVRGL 663
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 8/273 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ +EM + + +V A+ +++L A E ++ + K G P++ TY
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKR-GCGPNVQTYTA 347
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I A + +M + P A ++ AL+ Y E ++E + + M +
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHD 407
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
YNV I C + +A A+ D+ML G PN +TY+ I+ + K G A
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +M +GL ++ Y ++ +GG E A E + G PN T +++ G
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527
Query: 367 AGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+KV +A L F K V++ N +G
Sbjct: 528 LTVAKVDDALAL-------FWKMVESGNVPSSG 553
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A + F EM + ++ +++L+ L ++ +R+ + G +P++DTY
Sbjct: 603 TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD-----GCEPNVDTYT 657
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ C A ++ M +K ++P+ + AL+ G K + E K+ M
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +S Y I +LCK +A+ + ML K + V ++ + G K+G + +
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777
Query: 306 KKFYRIMSNSGLSPN 320
+ +M + + N
Sbjct: 778 LELLHVMESRNCTLN 792
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 4/295 (1%)
Query: 102 KTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
K R D +++I++ ++ A+ F EM E ++ + ++ A+
Sbjct: 64 KMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKET 123
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+E +R+ E + G+ P + TYN +I +C+ +A IL M S PN ++
Sbjct: 124 KLEEGRRILDEMVEK-GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTY 182
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ GF +++ +L M + V YN IH CK+ A LL+ M
Sbjct: 183 NELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+ P+ TYS FI CK G EEA + + G+ N +Y ++ CK G +
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDD 302
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTW 393
A + + +PN +T +L+ GL KV EA L+ ++++ V T+
Sbjct: 303 ANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 1/271 (0%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
NER + I + + A+ +M E +L SV +N+L+ Y +
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG-QCKIGYLDSAYRL 236
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ G+ PD TY+ I C+ A + + K IK N + AL+ G+ K
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K +D N +L M S YN I LCK RK EA L++ M+ KG+K T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I K+G+F+ A + M +SG P+ +Y ++ C G+ + A
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+G +P+ T ++ G ++ A +++
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVL 447
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 137/323 (42%), Gaps = 5/323 (1%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R P H +++ IN + + + L+E+ + + + + I Y +
Sbjct: 101 RERGCEPNIH----TYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCK 156
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
M E A M + + +N L+ K+ + + ++ + P +
Sbjct: 157 EGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR-LTPSVV 215
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I C+ SAY +L M+ + P+ ++ + K+ + E+ N + +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G+K+ +Y I CK K +A +LLD ML++ PNS TY+ I G CK+
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA M GL Y ++ M K GD++ A + ++ G+ P+ +
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395
Query: 363 VTGLAGASKVSEAKELIGLVKEK 385
+ + EA++++ ++ E+
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFER 418
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
Query: 118 ILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++GQ + + A R M+E+ + ++ + L +E +F K
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL-KEK 278
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIK + Y +I +C++ A S+L M + PN+S++ AL+ G KE K ++
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M + G+K V Y + I ++ K A +LD+M+S G +P+ Y+ FI+
Sbjct: 339 LLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC GN +EA+ +M G+ P++ Y ++ G A K G P+
Sbjct: 399 FCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPS 458
Query: 356 FTTMKSLVTGL 366
T L+ L
Sbjct: 459 HHTYSCLIKHL 469
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 143/357 (40%), Gaps = 31/357 (8%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+ + ++ I+ +A + + L+ + T L N + I + + A+
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLM 342
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M + L+ +V + L++A+ D+ R+ + + G +PD+ Y I AFC
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS-GYQPDVYIYTAFIHAFCT 401
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +++ M + + P+A ++ ++ + VL+ M G
Sbjct: 402 RGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHT 461
Query: 254 YNVRIH--------------SLC---------------KLRKCAEAKALLDEMLSKGMKP 284
Y+ I +LC K+ K A L ++ML G P
Sbjct: 462 YSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
N TY+ I G CK G A+K + M+ G+SP+ ++Y +++ C+ G Y A+
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV 581
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ G +P ++ L GL +AK + L++ + + W + GL
Sbjct: 582 GAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGL 638
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++D +SA+S+ M +K + N S+ L+ G + + ++ + + M V
Sbjct: 17 NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y V +H+L + + EA L EM +G +PN TY+ I CK+ EE ++ M
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL P+ Y ++ CK G E A + PN T L+ G V
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAG 399
A L+ +++ + T +V T+N + G
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHG 223
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 125/312 (40%), Gaps = 7/312 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D+ +S+ I+ L + + LK + NE + I Y +A + A
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + +NAL+ L + +E + +E G+K + TY +I A +
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCKERKVQEA-LLLMESMIQKGLKCTVPTYTILIVAMLK 366
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D A+ IL +M +P+ + A + F ++ ++ MM G+
Sbjct: 367 EGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALT 426
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + I + L A +L M G P+ TYS I K EE K Y+ ++
Sbjct: 427 YTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK----EELTKKYKNVA 482
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PN V+F V + K +ETAL ++ + G PN T L+ GL ++
Sbjct: 483 LCDSIPN--VFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLG 540
Query: 374 EAKELIGLVKEK 385
A++L + E+
Sbjct: 541 VAQKLFDHMNER 552
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 1/170 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F++M EH ++ + L++ L +++F + G+ P YN
Sbjct: 505 ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLF-DHMNERGVSPSEAIYNS 563
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ CE A ++ M P S L G Y+E E V + + G
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + I L K LL M ++G + + TY I G
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 71/170 (41%)
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+A + +M PN +++ L+ G K + K+ M G+ ++YN +
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+ C+L +A L+ M+ G P + + G ++G+ E+AK + + G +
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + ++ + K G + A+G + T + L+ GL G
Sbjct: 626 DDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGLDG 675
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 9/345 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+I+EI + P D + +++ I ++ + + LE + PD+ S
Sbjct: 162 RIMEILENSGAVP----DVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRS 217
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ G+ + A+ + + V + L+ A + ++ E K G
Sbjct: 218 LCDSGK---LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK-G 273
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
KPD+ TYN +I C+ A L M KPN + ++ ++ D
Sbjct: 274 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAE 333
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L M R G V +N+ I+ LC+ R A +L++M G PNS++Y+ ++GF
Sbjct: 334 RLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGF 393
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C++ + A ++ IM + G P+ Y T++ +CK G + A+ + +KG P
Sbjct: 394 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVL 453
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T +++ GL K A EL+ ++ K K ++ T++ + GL
Sbjct: 454 ITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 158/354 (44%), Gaps = 22/354 (6%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERF 112
+K LE+ ++ P D + ++ + L ++ + L+ R PD+
Sbjct: 193 DKALEVLERMSVAP----DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI---- 244
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
++I++ N + A++ EM + + V +N L+ + E +
Sbjct: 245 -TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 303
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
P +YG KP++ T+N ++++ C + A +L++M RK P+ +F L+ ++
Sbjct: 304 MP-SYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKR 362
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
VL+ M ++G YN +H C+ +K A L+ M+S+G P+ VTY+
Sbjct: 363 LLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 422
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ CKDG + A + +S+ G SP Y T++ + K G E A+ +E K
Sbjct: 423 TLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRK 482
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI----GLVKEKFTKNVDTWNEIEAGL 400
G P+ T +L+ GL KV EA ++ GL + T+N I GL
Sbjct: 483 GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL---SIKPSAVTYNAIMLGL 533
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 15/316 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFH 113
K+L+ R P D + +++ IN + + + ++L + + +P++
Sbjct: 264 KLLDEMRKKGCKP----DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVI----- 314
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
H+IIL + A R +M SV FN L+ L + V +
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 374
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
PK +G P+ +YN ++ FC+ A L M + P+ ++ L+ K+ K
Sbjct: 375 PK-HGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ ++L + G + YN I L K+ K A LL+EM KG+KP+ +TYS
Sbjct: 434 VDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYST 493
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ G ++G +EA K + M + P++ Y ++ +CK A+ F + KG
Sbjct: 494 LLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 553
Query: 352 WVPNFTTMKSLVTGLA 367
P T L+ G+A
Sbjct: 554 CKPTEATYTILIEGIA 569
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E G PD+ +I+ FC S + A I+ ++ P+ ++ L+ G+
Sbjct: 128 FLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYC 187
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K +++K L+++ER + V YN + SLC K EA +LD L + P+ +
Sbjct: 188 KS---GEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI 244
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I C D +A K M G P+ Y ++ +CK G + A+ F
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ G PN T ++ + + +A+ L+ ++++ + +V T+N
Sbjct: 305 PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N+ + L + + E L+ M+ +G P+ + + I GFC+ G ++A + I+ N
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKE-SIAKGWVPNFTTMKSLVTGLAGASKVS 373
SG P+ Y ++ CK G+ + AL + S+A P+ T +++ L + K+
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA----PDVVTYNTILRSLCDSGKLK 225
Query: 374 EAKELI 379
EA E++
Sbjct: 226 EAMEVL 231
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I C+ K +A +++ + + G P+ +TY+ I G+CK G ++A + MS +
Sbjct: 148 IRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---V 204
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P+ Y T++ +C G + A+ + + P+ T L+ S V +A +
Sbjct: 205 APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK 264
Query: 378 LIGLVKEKFTK-NVDTWNEIEAGL 400
L+ +++K K +V T+N + G+
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGI 288
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A + F EM E + ++ +N L+ L E V + K+ GI P+L TYN
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM-KSDGINPNLITYN 342
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A S+ ++ + + P+ ++ LV+GF K+ KV++ ME
Sbjct: 343 TLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K Y + I + + +A L M G+ P+ TYS I+GFC G EA
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEA 462
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ ++ M PN +Y TMV CK G AL +E K PN + + ++
Sbjct: 463 SRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522
Query: 366 LAGASKVSEAKELI 379
L K EA+ L+
Sbjct: 523 LCKERKSKEAEGLV 536
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 142/328 (43%), Gaps = 2/328 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD +F I I EA L EL+ N + I + E A
Sbjct: 161 LDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + L + + L+ L K+ E + +G+ P+L TYN V+ C
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGL-FKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLC 279
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A+ + EM + + N ++ L+ G +E K + N+V+ M+ G+ +
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C +RK +A +L ++ S+G+ P+ VTY+ + GFCK G+ A K + M
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ P+ Y ++ + + E A+ G P+ T L+ G ++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459
Query: 373 SEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+EA L +V++KF N +N + G
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLG 487
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K+ G+ P L TYN ++ FC+ D+S A ++ EM+ + IKP+ ++ L+ F + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E ++ ME G+ V Y+V IH C + EA L M+ K +PN V Y+
Sbjct: 425 EKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM 484
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G+CK+G+ A + +R M L PN + Y M+ +CK + A G ++ I G
Sbjct: 485 VLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544
Query: 353 VPN 355
P+
Sbjct: 545 GPS 547
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 57 KILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
K L +CR + L+P + ++I ++ + +G + ++E++ R ++ +
Sbjct: 356 KALSLCRDLKSRGLSP----SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY 411
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + +++ E A++ M+E L V ++ L+ I E R+F +
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+P+ YN ++ +C+ S A + EM+ K + PN +S+
Sbjct: 472 K-KFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY-------------- 516
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
RY I LCK RK EA+ L+++M+ G+ P+
Sbjct: 517 ----------RY-----------MIEVLCKERKSKEAEGLVEKMIDSGIGPS 547
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + T AVR F+EM + + SV ++AL+ L +E ++ E K G+ P
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEM-KDLGLVP 326
Query: 180 DLDTYNRVIKAFCESSDSSSA------------------YSILAE--------------- 206
+L T N V+ FC+ + A Y+IL +
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386
Query: 207 --MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M K ++PNA + L+AGF + + V+ +L M G+++ + YNV I +LC
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A LLDEML G++P +TY+ I G+C+ GN + A + M N Y
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTY 506
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +C+ G E E + KG VPN T ++ G+
Sbjct: 507 NVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 103/204 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P+ T+N ++ +C+ S++++A + EM ++ I + ++ ALV G E K E+
Sbjct: 253 GISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEG 312
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K++ M+ G+ ++ N ++ CK +A+ +D M K +KPN VTY+ + G
Sbjct: 313 VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDG 372
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ + ++A MS G+ PN+ +Y ++ + GD+ + G E KG +
Sbjct: 373 YRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRAD 432
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ L +V +A +L+
Sbjct: 433 IVTYNVLIGALCVKGEVRKAVKLL 456
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 4/226 (1%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P + NR++ A + A R+ + P+ +F +++G K +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE---AKALLDEMLSKGMKPNSVTYSHFIY 294
V + + +G+ V YN I CK + ALL EM+ G+ PN VT++ +
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G+CKD N A + + M G++ + Y +V+ +C G E + E G VP
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
N T+ S++ G +++A+ I +++K K NV T+ + G
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDG 372
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 116/275 (42%), Gaps = 2/275 (0%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+A H KEM E + + FN L+ + RVF E K GI
Sbjct: 234 GRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEM-KQQGIAAS 292
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY+ ++ C ++ EM + PN ++ +++ GF K+ D +
Sbjct: 293 VVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWID 352
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME+ +K V Y + + +L K +A A+ + M KG++PN+ Y+ I GF ++G
Sbjct: 353 SMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNG 412
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++ M G+ + Y ++ +C G+ A+ E + G P T
Sbjct: 413 DWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYN 472
Query: 361 SLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWN 394
+++ G + A E+ + K K NV T+N
Sbjct: 473 TIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN 507
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A+ + M +R + +N L+ T D++ V + E + G++
Sbjct: 373 YRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEM-RMKGVRA 431
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I A C + A +L EM ++P ++ ++ G+ ++ + ++
Sbjct: 432 DIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIR 491
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ME+ ++ V YNV I LC++ K E LL+EML KG+ PN VTY G +
Sbjct: 492 TRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEK 551
Query: 300 GNFEEAKKF 308
G + + F
Sbjct: 552 GYTPDVRGF 560
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 12/222 (5%)
Query: 187 VIKAFCESSDSSSAYS--ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
++ A +S ++Y +LA +P+A S L++ E+ + + + R
Sbjct: 119 LVLALASASQPLASYEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALR 178
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ + +N+ I LCK + +A + ++ + G+ P+ VTY+ I G+CK G
Sbjct: 179 RRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRG---R 235
Query: 305 AKKFYRI------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
A + Y + M +G+SPN + +V CK + A+ +E +G + T
Sbjct: 236 AGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVT 295
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
+LV GL KV E +L+ +K+ N+ T N + G
Sbjct: 296 YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNG 337
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 2/281 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E A + M + V +N+L+ L A + + R ++ K G++P
Sbjct: 184 YCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEV-DAARDMVDTMKRDGVEP 242
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY I +C + A+S+ EM RK + P+ + ALV G K+ ++ + +
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME+ G Y + I +L K ++ E+ +LL E++S+G+ + + Y+ + CK+
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EAK +R + +PN Y ++ +CK G+ + A E K PN T
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
S++ GL V +A + + +KE+ NV T+ + G
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDG 463
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +N ++ +C+ D +A+++ M + + + + +LVAG + + + ++
Sbjct: 173 DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV 232
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+R G++ V Y + I C+ +A +L +EM+ KG+ P+ VT S + G CKD
Sbjct: 233 DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA +R M G +PN Y ++ + K +L E +++G V +
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352
Query: 360 KSLVTGLAGASKVSEAKEL 378
+L+ L K+ EAK++
Sbjct: 353 TALMDWLCKEGKIDEAKDM 371
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E+ G+ D+ YN +++ C + + A +L EM + I P+ +F AL+ G +K
Sbjct: 688 EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKS 747
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
++ M +G+ V+ +N + L + E+ +L+EM +G++P+++TY
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTY 807
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ G+ K N EA + Y M G P S Y ++ K G A E
Sbjct: 808 DILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQN 867
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+G +P T LV+G + +E ++ + +KEK
Sbjct: 868 RGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEK 903
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F+EM+E + + L+ L + +V E + + PD YN
Sbjct: 506 EKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK-NLLPDAVVYNV 564
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
I C S A S L EM +KP+ ++ ++A +E K K+L M+R
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + Y+ I L + +AK LL+EM S G P S+T+ + + +
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M N+GL + +VY T+V +C G A+ +E +G P+ T +L+ G
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGH 744
Query: 367 AGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
+ + A ++ + NV T+N + GL
Sbjct: 745 FKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 2/209 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG--ALVAGFYKEEKYE 233
G+ D T N V+ C A ++ M R G +LV G+ K E
Sbjct: 132 GVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDME 191
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
V + M+ G+ V YN + LC+ + A+ ++D M G++PN VTY+ FI
Sbjct: 192 TAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFI 251
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+C+ ++A Y M G+ P+ +V +CK G + A +E G
Sbjct: 252 VEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAA 311
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLV 382
PN T L+ LA A + +E+ L+G V
Sbjct: 312 PNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 9/262 (3%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A + EM+E + +V F++++ L + + + ++ K GI P++
Sbjct: 396 KAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL-VKRGWVGKATDYMREMKERGIDPNV 454
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY VI + +A + EM + ++ N +LV G K K E + +
Sbjct: 455 VTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ Y I L K A + E+ K + P++V Y+ FI C G
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGK 574
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL----GFCKESIAKGWVPNFT 357
+EA+ F M ++GL P+ Y TM+ + G AL G + SI PN
Sbjct: 575 SKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIK----PNLI 630
Query: 358 TMKSLVTGLAGASKVSEAKELI 379
T +L+ GL A V +AK L+
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLL 652
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK--EVKRVFIEFPKT--YGIKP 179
MT A+ +EM + FNAL+L +K + F + + +GI P
Sbjct: 713 GMTRKAMVVLEEMSGRGIAPDTITFNALILG-----HFKSGHLDNAFSTYDQMLYHGISP 767
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE-KYEDVNKV 238
++ T+N ++ + + +L EM ++ I+P+ ++ LV G+ K+ K E V
Sbjct: 768 NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY 827
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+M+ + G VS YN I K+ ++AK L +EM ++G+ P S TY + G+ K
Sbjct: 828 CEMVGK-GFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSK 886
Query: 299 DGNFEEAKKFYRIMSNSGLSPN 320
N E +KF + M G SP+
Sbjct: 887 LRNGTEVRKFLKDMKEKGFSPS 908
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TY +I A C++ + A +L+EM+ KSI PN +F +++ G K
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD---EMLSKGMKPNSVTYSHFIYG 295
++ M+ G+ V Y I KC +A LD EML +G++ N + G
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSF---KCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNG 498
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+G E+A+ +R M+ G+ + Y T++ + K G+ A +E K +P+
Sbjct: 499 LKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
+ L K EA+ + GL ++ T N
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYN 598
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 127 EHAVRTFKEMDEHKL--RHSVGA--FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
E + K+M H L H+ + L+ AL A + ++V E + I P++
Sbjct: 362 EGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK-SISPNVV 420
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T++ +I + A + EM + I PN ++G ++ G +K E V M
Sbjct: 421 TFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G++ + + ++ L K K +A+AL EM +G+ + V Y+ I G K GN
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNL 540
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
A K + ++ L P++ VY + +C G + A F +E + G P+ T ++
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTM 600
Query: 363 VTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ + K ++A +L+ G+ + N+ T++ + GL
Sbjct: 601 IAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGL 639
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 83 NKLSEANYFNGISQ----YLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
N L +NG+++ LEE+ R PD F+A I+ + ++ ++A T+ +
Sbjct: 703 NTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT--FNAL-ILGHFKSGHLDNAFSTYDQ 759
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M H + +V FN LL L A E V E K GI+P TY+ ++ + + S
Sbjct: 760 MLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEM-KKRGIEPSNLTYDILVTGYGKQS 818
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A + EM K P S++ AL++ F K ++ M+ G+ Y+
Sbjct: 819 NKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ + KLR E + L +M KG P+ T S F K G EA++ +
Sbjct: 879 ILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLK 933
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 121/329 (36%), Gaps = 36/329 (10%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+D + ++ + L A + ++ +K N + I+ Y + N + A
Sbjct: 207 VDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSL 266
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++EM + V +AL+ L + E +F E K G P+ TY +I
Sbjct: 267 YEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKI-GAAPNHVTYCMLIDTLA 325
Query: 193 ESSDSSSAYSILAEMDRKSI-----------------------------------KPNAS 217
++ + + S+L E+ + + PN
Sbjct: 326 KAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGV 385
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ K + +VL ME + V ++ I+ L K +A + EM
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+G+ PN VTY I G K E A Y M G+ N + ++V + K G
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKI 505
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGL 366
E A +E +G + + +L+ GL
Sbjct: 506 EKAEALFREMNERGVLLDHVNYTTLIDGL 534
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV--YFTMV 328
+ALL EM +G+ ++VT + + G C+DG + A +M G V + ++V
Sbjct: 122 EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLV 181
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFT 387
CK GD ETA + A+G + SLV GL A +V A++++ +K +
Sbjct: 182 DGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVE 241
Query: 388 KNVDTW 393
NV T+
Sbjct: 242 PNVVTY 247
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 2/229 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L+ V + LL L AK +V + + G++PD +YN V+K CE S S A
Sbjct: 150 LKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRA 209
Query: 201 YSILAEMDRKS--IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+L M +KS PN ++ ++ G ++E + + M + G+ V Y I
Sbjct: 210 LDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSII 269
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+LCK R +A+ +L +M+S G +PN VTY+ I+G+ G ++E +R M++ GL
Sbjct: 270 DALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLM 329
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
PN + + +CK G + A F AKG PN T L+ G A
Sbjct: 330 PNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYA 378
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 3/280 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A ++M + + + +N ++ +I+ +KE +F E + G+ P++
Sbjct: 274 KARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREM-TSQGLMPNI 332
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T N + + C+ S A M K KPN ++ L+ G+ E + D+ +
Sbjct: 333 VTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS 392
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME G+ + ++N+ I + K E + +M +G+ P++ TY I F + G
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMK 360
+A + M GL P VY +++ C G+ A E +++G PN
Sbjct: 453 LADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFN 512
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
S++ L +V EA ++ V + +V T+N + G
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDG 552
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY +I A C++ A +L +M +PN ++ ++ G+ ++++
Sbjct: 257 GVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKET 316
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G+ + N + SLCK K EA D M +KG KPN VTYS ++G
Sbjct: 317 AGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHG 376
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ +G F + + M +G+ + V+ ++ K G + + + +G +P+
Sbjct: 377 YATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPD 436
Query: 356 FTTMKSLVTGLAGASKVSEAKE 377
T ++ + ++++A +
Sbjct: 437 ACTYGIVIAAFSRMGRLADAMD 458
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 6/332 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D+ F+I I+ + + +++ + + + + I + + A+ F
Sbjct: 401 DQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKF 460
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M L+ +++L+ + + + K + E +P++ +N +I + C+
Sbjct: 461 NQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCK 520
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A+ I + +P+ +F +L+ G+ K E VL M G++ V
Sbjct: 521 EGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVS 580
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I C+ + + L EMLSKG+KP ++TY ++G DG AKK M
Sbjct: 581 YNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMI 640
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
SG + + S ++ +C+ + A+ K+ A N + +++ + K
Sbjct: 641 ESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKRE 700
Query: 374 EAKELI------GLVKEKFTKNVDTWNEIEAG 399
EAKEL GLV T V N ++ G
Sbjct: 701 EAKELFDSISATGLVPNASTYGVMIKNLLKEG 732
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PD+ +YN +I +C + + EM K +KP ++G ++ G + + +
Sbjct: 573 GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGA 632
Query: 236 NKVLQMMERYG-----------------------------------MKSGVSMYNVRIHS 260
K+ M G +K +++ N I +
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDA 692
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ K+RK EAK L D + + G+ PN+ TY I K+G+ EEA + +M SG +P+
Sbjct: 693 MYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPS 752
Query: 321 SSVYFTMVYFMCKGGDYETA 340
S + ++ + + G+ A
Sbjct: 753 SRLLNYIIRVLLEKGEIVKA 772
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 1/243 (0%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
R ++ FN+++ +L E +F +F G +PD+ T+N +I + A+
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIF-DFVIHIGERPDVITFNSLIDGYGLVGKIEKAF 563
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L M I+P+ S+ L+ G+ + + +D + M G+K Y + +H L
Sbjct: 564 GVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGL 623
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+ AK + EM+ G + T + G C++ +EA ++ + + N
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI 683
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++ TM+ M K E A A G VPN +T ++ L V EA + L
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSL 743
Query: 382 VKE 384
+++
Sbjct: 744 MEK 746
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 39/183 (21%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK--------------------------- 283
V YN+ + C+ R+ AL L G+K
Sbjct: 119 VCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLL 178
Query: 284 ---------PNSVTYSHFIYGFCKDGNFEEAKKFYRIM--SNSGLSPNSSVYFTMVYFMC 332
P++++Y+ + C+D + A M + G SPN Y T+++ +
Sbjct: 179 HRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLF 238
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVD 391
+ G+ A E + +G VP+ T S++ L A + +A+ ++ ++ F N
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKV 298
Query: 392 TWN 394
T+N
Sbjct: 299 TYN 301
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 64/162 (39%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ T ++ C ++ A ++ ++ ++K N + ++ YK K E+
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + G+ S Y V I +L K EA + M G P+S ++ I
Sbjct: 703 KELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRV 762
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G +A + + +S +S ++ + G Y
Sbjct: 763 LLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKY 804
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 38/195 (19%)
Query: 116 SIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
IIL G + N + A+ FK++ ++ ++ N ++ A+ + +E K +F
Sbjct: 652 GIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELF----- 706
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
DS SA ++ PNAS++G ++ KE E
Sbjct: 707 ----------------------DSISATGLV---------PNASTYGVMIKNLLKEGSVE 735
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + +ME+ G + N I L + + +A + ++ K + + T S +
Sbjct: 736 EADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLM 795
Query: 294 YGFCKDGNFEEAKKF 308
F ++G + E K
Sbjct: 796 ALFSREGKYWEDVKL 810
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK + +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFE 338
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITK-WGLRPSVVSYNTLMNGYI 188
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ++A K I + + +L++GL +
Sbjct: 309 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRS 368
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEH 339
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 340 RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G VP+ T L+ G
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 187 VIKAFCESSDSSSAYSILAEM--DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+I+ SA ++ A + R + + + F L+ + + D + ++
Sbjct: 41 LIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE 100
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ + + L KL+ +E+L G + ++ ++ FCKDG+
Sbjct: 101 HKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRL 160
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A+ + ++ GL P+ Y T++ + GD + +A G P+ T L+
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220
Query: 365 GLAGASKVSEAKEL 378
GL SK+ +A EL
Sbjct: 221 GLCKESKMDDANEL 234
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 2/269 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ +D + V +N +L L + K+ V ++ PD+ TY +I+A C
Sbjct: 204 LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEV-LDRQLQKECYPDVITYTILIEATC 262
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A +L EM K KP+ ++ L+ G KE + ++ K L M YG + V
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N+ + S+C + +A+ LL +ML KG P+ VT++ I C+ G A M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G +PNS Y +++ CK + A+ + +++G P+ T +L+T L KV
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442
Query: 373 SEAKELIGLVKEKFTKNV-DTWNEIEAGL 400
A E++ + K V T+N + GL
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGL 471
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
++EI + P D + +++ I+ ++ + Q L+ + PD+ ++
Sbjct: 171 VMEILEQSGAVP----DVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTL 226
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
G+ + A+ + + V + L+ A + ++ E + G
Sbjct: 227 CDSGKL---KQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM-RNKGS 282
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KPD+ TYN +I C+ A L M +PN + ++ ++ D K
Sbjct: 283 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 342
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M R G V +N+ I+ LC+ A +L++M G PNS++Y+ ++GFC
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 402
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K+ + A ++ IM + G P+ Y T++ +CK G + A+ + +KG P
Sbjct: 403 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 462
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T +++ GL+ K A +L+ ++ K K ++ T++ + +GL
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 156/368 (42%), Gaps = 48/368 (13%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQA 123
L E + D + ++I I + + + L+E++ ++PD+ + I G+
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A++ M + + +V N +L ++ + + +++ + + G P + T
Sbjct: 303 ---DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVT 358
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C A IL +M PN+ S+ L+ GF KE+K + + L +M
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418
Query: 244 RYGMKSGVSMYNVRIHSLCK-----------------------------------LRKCA 268
G + YN + +LCK + K
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A LLDEM KG+KP+ +TYS + G ++G +EA KF+ + G+ PN+ Y +++
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLV 382
+CK + A+ F I+K P T L+ G+A EA +L+ GLV
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
Query: 383 KEKFTKNV 390
K+ + V
Sbjct: 599 KKSSAEQV 606
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E G PD+ +I+ FC + A ++ +++ P+ ++ L++G+
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K +++ LQ+++R + V YN + +LC K +A +LD L K P+ +
Sbjct: 196 KS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I CK+ +A K M N G P+ Y ++ +CK G + A+ F
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ G PN T ++ + + +A++L+ ++++ + +V T+N
Sbjct: 313 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + ED K L+ M G + I C++ K +A +++ + G P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I G+CK G + A +++ ++P+ Y T++ +C G + A+
Sbjct: 184 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ K P+ T L+ S V +A +L+ ++ K +K +V T+N + G+
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 2/269 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ +D + V +N +L L + K+ V ++ PD+ TY +I+A C
Sbjct: 147 LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEV-LDRQLQKECYPDVITYTILIEATC 205
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A +L EM K KP+ ++ L+ G KE + ++ K L M YG + V
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N+ + S+C + +A+ LL +ML KG P+ VT++ I C+ G A M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G +PNS Y +++ CK + A+ + +++G P+ T +L+T L KV
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385
Query: 373 SEAKELIGLVKEKFTKNV-DTWNEIEAGL 400
A E++ + K V T+N + GL
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGL 414
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
++EI + P D + +++ I+ ++ + Q L+ + PD+ ++
Sbjct: 114 VMEILEQSGAVP----DVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTL 169
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
G+ + A+ + + V + L+ A + ++ E + G
Sbjct: 170 CDSGKL---KQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM-RNKGS 225
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KPD+ TYN +I C+ A L M +PN + ++ ++ D K
Sbjct: 226 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 285
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M R G V +N+ I+ LC+ A +L++M G PNS++Y+ ++GFC
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K+ + A ++ IM + G P+ Y T++ +CK G + A+ + +KG P
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T +++ GL+ K A +L+ ++ K K ++ T++ + +GL
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 156/368 (42%), Gaps = 48/368 (13%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQA 123
L E + D + ++I I + + + L+E++ ++PD+ + I G+
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A++ M + + +V N +L ++ + + +++ + + G P + T
Sbjct: 246 ---DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVT 301
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I C A IL +M PN+ S+ L+ GF KE+K + + L +M
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361
Query: 244 RYGMKSGVSMYNVRIHSLCK-----------------------------------LRKCA 268
G + YN + +LCK + K
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A LLDEM KG+KP+ +TYS + G ++G +EA KF+ + G+ PN+ Y +++
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLV 382
+CK + A+ F I+K P T L+ G+A EA +L+ GLV
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
Query: 383 KEKFTKNV 390
K+ + V
Sbjct: 542 KKSSAEQV 549
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E G PD+ +I+ FC + A ++ +++ P+ ++ L++G+
Sbjct: 79 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K +++ LQ+++R + V YN + +LC K +A +LD L K P+ +
Sbjct: 139 KS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I CK+ +A K M N G P+ Y ++ +CK G + A+ F
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ G PN T ++ + + +A++L+ ++++ + +V T+N
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + ED K L+ M G + I C++ K +A +++ + G P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TY+ I G+CK G + A +++ ++P+ Y T++ +C G + A+
Sbjct: 127 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ K P+ T L+ S V +A +L+ ++ K +K +V T+N + G+
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 6/307 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D +A ++ +S NG+ + E PD + ++ I + + A
Sbjct: 68 HDDVIAKGFRLDNVSYGTLINGLCKSGET--KAPD---QFMYSMIINRLCKDKLVVDAYD 122
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ EM ++ V +N L+ I ++ R+F E + I P++ ++N +I
Sbjct: 123 LYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEM-RLKNIVPNVCSFNILIDGL 181
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ D S+LA M ++S+KP+ + +L+ G++ +K + M + G+ +
Sbjct: 182 CKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDL 241
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I+ L K + EA L EM K M P+++TYS I G K G
Sbjct: 242 RSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDE 301
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M +G S N Y +++ +CK G ++TA+ + KG+ PN T LV GL +
Sbjct: 302 MRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGR 361
Query: 372 VSEAKEL 378
+ +A+E+
Sbjct: 362 LKDAQEI 368
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 131/333 (39%), Gaps = 55/333 (16%)
Query: 74 DRLAFSIAINKLSEAN-YFNGISQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAV 130
D+ +S+ IN+L + + Y E + R PD+ + + GQ E A+
Sbjct: 100 DQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQL---EDAI 156
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--------------- 175
R F EM + +V +FN L+ L D K K V K
Sbjct: 157 RLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGY 216
Query: 176 -------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
G+ DL +YN +I ++ A + EM KS+ P+
Sbjct: 217 FLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDT 276
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
++ L+ G K + V ++ M G + V Y+ ++ LCK A + +
Sbjct: 277 ITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTK 336
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+ KG +PN VTY+ + G CK+G ++A++ + + G + +Y M+
Sbjct: 337 IKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMIN------- 389
Query: 337 YETALGFCKESI---AKGWVPNFTTMKSLVTGL 366
G C+E++ A G PN T + ++ L
Sbjct: 390 -----GLCREALFDEAYGCTPNAVTYEIIIRAL 417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD Y+ +I C+ AY + EM K I P+ ++ L+ GF + ED ++
Sbjct: 99 PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M + V +N+ I LCK K++L M+ + +KP+ VT S I G+
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+A+ + M+ +G++ + Y M+ + K + A+ KE K P+ T
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278
Query: 359 MKSLVTGLAGASKVSEAKELI 379
+L+ GL ++S +LI
Sbjct: 279 YSTLIDGLGKLGRISYVWDLI 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T ++K C +++ A ++ K + + S+G L+ G K + +
Sbjct: 40 GYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAP 99
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ MY++ I+ LCK + +A L EM+ K + P+ VTY+ IYG
Sbjct: 100 DQF--------------MYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYG 145
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G E+A + + M + PN + ++ +CK GD + I + P+
Sbjct: 146 FCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPD 205
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
T SL+ G K ++A+ + + + T ++ ++N + GL +
Sbjct: 206 VVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSK 253
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 22/215 (10%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ + I+ + + L+ FY + VL + + G + + LC +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF------------------ 308
+A D++++KG + ++V+Y I G CK G + +F
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120
Query: 309 ---YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
Y M + P+ Y T++Y C G E A+ E K VPN + L+ G
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
L V K ++ ++K+ +V T + + G
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDG 215
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME G++ + ++ I+S L + A ++L ++L G +P++VT + + G C +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF---------CK------- 345
++A F+ + G ++ Y T++ +CK G+ + F CK
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120
Query: 346 -----ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
E + K P+ T +L+ G ++ +A L ++ K NV ++N + G
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180
Query: 400 L 400
L
Sbjct: 181 L 181
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ F++M+E ++ SV ++ ++ +L + + +F E + GIK D+ Y+
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM-EMKGIKADVVAYS 283
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C +L EM ++I PN +F AL+ F KE K + ++ M
Sbjct: 284 SIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVAR 343
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ Y+ I CK + EA +LD M+SKG +PN VTYS I +CK +
Sbjct: 344 GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNG 403
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + +S+ GL ++ Y T+V C+ G A +E +++G P+ T L+ G
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L ++ +A E+ + K + + +N I G+
Sbjct: 464 LCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
AV M E K R +V N L+ L + E V I+ YG + + TY
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA-LVLIDRMVKYGCEANEITYG 213
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ C+S +++ A + +M+ +SIK + + ++ K+ +D + ME
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K+ V Y+ I LC + + +L EM+ + + PN VT+S I F K+G EA
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+ Y M G++P++ Y +++ CK A ++KG PN T L+
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
A +V L + K + T+N + G Q
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
AK R+F E + G+ D TYN +++ FC+S + A + EM + + P+
Sbjct: 397 AKRVDNGMRLFCEIS-SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++G L+ G + + ++ + M++ M G+ +YN+ IH +C K +A +L +
Sbjct: 456 TYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSL 515
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
KG+KP+ +TY+ I G CK G+ EA +R M G +P+ Y ++ G
Sbjct: 516 SVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGV 575
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+++ +E +G+ + +T+K +V L+
Sbjct: 576 ISSVELIEEMKMRGFAADASTIKMVVVMLS 605
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 13/315 (4%)
Query: 76 LAFSIAINKLS-EANYFNGISQYLE-ELK-TRPDLQNERFHAHSIILYGQAN--MTEHAV 130
+ +SI I+ L + N + +S + E E+K + D+ A+S I+ G N +
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVV-----AYSSIIGGLCNDGRWDDGA 299
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +EM + +V F+AL+ E K ++ E GI PD TY+ +I
Sbjct: 300 KMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV-ARGIAPDTITYSSLIDG 358
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC+ + A +L M K +PN ++ L+ + K ++ ++ ++ + G+ +
Sbjct: 359 FCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVAD 418
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN + C+ K AK L EM+S+G+ P+ VTY + G C +G ++A + +
Sbjct: 419 TVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFE 478
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + +Y +++ MC + A FC S+ KG P+ T ++ GL
Sbjct: 479 KMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV-KGVKPDVLTYNVMIGGLCKK 537
Query: 370 SKVSEAKELIGLVKE 384
+SEA L +KE
Sbjct: 538 GSLSEADMLFRKMKE 552
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 11/250 (4%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT-----YGIKPDLDTYNRVI 188
KEMD + + H++ N ++ + +++ F +G +P+ T++ +I
Sbjct: 93 KEMDLNGIEHNMYTMNIMI------NCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLI 146
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC S A +++ M +PN + L+ G + + + ++ M +YG +
Sbjct: 147 NGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCE 206
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y ++ +CK A A L +M + +K + V YS I CKDGN ++A
Sbjct: 207 ANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSL 266
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G+ + Y +++ +C G ++ +E I + +PN T +L+
Sbjct: 267 FNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVK 326
Query: 369 ASKVSEAKEL 378
K+ EAKEL
Sbjct: 327 EGKLLEAKEL 336
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 2/272 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
A+ F+ M + + S+ F+ L A+ K+Y V F + GI+ ++ T N
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLG-FCKEMDLNGIEHNMYTMN 108
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A+S++ + +PN +F L+ GF E + + ++ M
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ V N I+ LC + EA L+D M+ G + N +TY + CK GN A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+R M + + Y ++ +CK G+ + AL E KG + S++ G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288
Query: 366 LAGASKVSE-AKELIGLVKEKFTKNVDTWNEI 396
L + + AK L ++ NV T++ +
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSAL 320
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 1/261 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S I+ + N +Q L+ + ++ N ++ I Y +A ++ +R F
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E+ L +N L+ + K +F E + G+ P + TY ++ C+
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV-SRGVPPSVVTYGILLDGLCD 466
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A I +M + + + ++ G K +D + + G+K V
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV I LCK +EA L +M G P+ TY+ I + + M
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMK 586
Query: 314 NSGLSPNSSVYFTMVYFMCKG 334
G + ++S +V + G
Sbjct: 587 MRGFAADASTIKMVVVMLSDG 607
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K EA L + M+ P+ + +S + ++ F + M +G+ N
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
M+ C+ A ++ G+ PN T +L+ G +VSEA L+ +V+
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 385 KFTKNVDTWNEIEAGL 400
K+ NV T N + GL
Sbjct: 169 KYRPNVVTVNTLINGL 184
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 155/345 (44%), Gaps = 41/345 (11%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFK 134
AF I+ L++ + + ++ +K++ + E F II+ Y +A E AV TF
Sbjct: 58 AFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETF---CIIMRKYARAQKVEEAVYTFN 114
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF-------IEFPKTY------------ 175
MD++ + ++ AFN LL AL +K+ ++ + +F + KTY
Sbjct: 115 IMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPN 174
Query: 176 --------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
G +PD+ TY ++ C++ A I+ EMD KP +
Sbjct: 175 LPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSV 234
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV + E + ED ME G++ V++YN I + CK + +L+EM KG
Sbjct: 235 LVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKG 294
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEA-KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ PNS T++ + G +EA + F R++ P++ Y M+ C+ + + A
Sbjct: 295 VTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVC--EPDADTYTMMIKMFCERDELKKA 352
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
L K K ++P+ T + L+ GL V++A L+ + EK
Sbjct: 353 LKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEK 397
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + + I ++ L +A + GI ++ +P H+ YG N E AV
Sbjct: 193 DIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHT---YGIENRIEDAV 249
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
TF EM+ + + V +NAL+ A A K V RV E G+ P+ T+N ++ +
Sbjct: 250 STFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEM-DCKGVTPNSRTFNIILSS 308
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
++ AY + M K +P+A ++ ++ F + ++ + KV + M+
Sbjct: 309 LIGRGETDEAYRVFLRM-IKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPS 367
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ + V I+ LC+ +A LL+EM+ KG++P+ VT+ K+G E+ KF +
Sbjct: 368 MHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR-EDVLKFLQ 426
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M ++ +V FN LL +E ++ E T GI P++ TYN ++ +C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYC 344
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A ++L M R P+ +F +L+ G+ ++ +D KV + + + G+ +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + C+ K A+ L EM+S G+ P+ +TY + G C +G E+A + + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S + +Y T++ MCKGG E A KG PN T +++GL +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 373 SEAKELI 379
SEA L+
Sbjct: 525 SEANILL 531
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 138/298 (46%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PD+ + I G T A+ ++M+E ++ V ++ ++ +L
Sbjct: 190 QPDVVTYNSIVNGICRSGD---TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GIK + TYN +++ C++ + +L +M + I PN +F L+
Sbjct: 247 AISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K ++ N++ + M G+ + YN + C + +EA +LD M+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VT++ I G+C ++ K +R +S GL N+ Y +V C+ G + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E ++ G +P+ T L+ GL K+ +A E+ L K K + + I G+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ L + E V ++ G +PD+ TYN ++ C S D+S A +L +
Sbjct: 160 TFNTLIKGLFLEGKVSEAV-VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ +++K + ++ ++ ++ + + + ME G+KS V YN + LCK K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+ LL +M+S+ + PN +T++ + F K+G +EA + Y+ M G+SPN Y T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
++ C A + P+ T SL+ G +V + ++ + K
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 386 FTKNVDTWNEIEAGLPQ 402
N T++ + G Q
Sbjct: 399 LVANAVTYSILVQGFCQ 415
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDT 183
+ A+ F+EM + S+ F+ A+ K + V ++F K GI ++ T
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV----LDFCKQLELNGIAHNIYT 125
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I FC + AYS+L ++ + +P+ ++F L+ G + E K + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN ++ +C+ + A LL +M + +K + TYS I C+DG +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A ++ M G+ + Y ++V +CK G + K+ +++ VPN T L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
K+ EA EL ++ + N+ T+N + G
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
KL EAN + +E+ TR N + + Y N A M +K
Sbjct: 313 KLQEAN------ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ F +L+ + K + +VF K G+ + TY+ +++ FC+S A +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM + P+ ++G L+ G K E ++ + +++ M G+ MY I +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A L + KG+KPN +TY+ I G CK G+ EA R M G +PN
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y T++ + GD + +E + G+ + +++K ++ L
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+N +IK S A ++ M +P+ ++ ++V G +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME +K+ V Y+ I SLC+ A +L EM +KG+K + VTY+ + G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + + M + + PN + ++ K G + A KE I +G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T +L+ G +++SEA ++ L V+ K + ++ T+ + G
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
N+LSEAN + + K PD+ I Y + ++ F+ + + L
Sbjct: 347 NRLSEAN---NMLDLMVRNKCSPDIVT---FTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+ ++ L+ + K + +F E ++G+ PD+ TY ++ C++ A
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
I ++ + + + ++ G K K ED + + G+K V Y V I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K +EA LL +M G PN TY+ I +DG+ + K M + G S ++S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 2/279 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
AN +E K E+ + + ++N ++ +L KE R+ ++ PD+
Sbjct: 236 ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS-TPDVV 294
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+Y+ VI +C + A ++ +M K +KPN ++ +++ K K + KVL+ M
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ +Y IH KL A DEMLSK + P+ +TY+ I GF + G
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E + + M + GL P+ Y T++ CK G+ A E + G PN T +L
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ GL ++ A EL+ +++K NV +N + G+
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I + E+ +R +E + I +Y +A +A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLH 456
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + ++ + AL+ L + + E K G++ ++ YN ++ C+
Sbjct: 457 NEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQLNVCIYNSMVNGICK 515
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A ++ EM+ I P+A ++ ++ + + + +K+LQ M G++ V
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NV ++ C L + LL ML KG+ P+++TY+ + C + K Y+ M
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
N G++P+S+ Y ++ CK + + A KE I KG+VP T+ +L+ K+
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKIL 695
Query: 374 EAKEL 378
EA+EL
Sbjct: 696 EAREL 700
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F EM K+ + L+ E + +F E + G+KPD TY +I
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI-SRGLKPDEVTYTTLI 440
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ + +A+S+ EM + + PN ++GAL+ G K + + N++L M + G++
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +YN ++ +CK +A L+ EM G+ P+++TY+ I +C+ G+ ++A K
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ M + GL P + ++ C G E + KG VP+ T +L+
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 138/313 (44%), Gaps = 3/313 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY-GQANMTEHAVRT 132
D +++S I+ + +++++ + L+ R+ +SIIL + + A +
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIK-GLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM K+ + L+ + + F E + I PD TY +I+ F
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFG 409
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ ++ EM + +KP+ ++ L+ + K + + + M + GM +
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LCK + A LLDEM KG++ N Y+ + G CK GN E+A K + M
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G+ P++ Y T++ C+ GD + A +E + +G P T L+ G +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGML 589
Query: 373 SEAKELIGLVKEK 385
+ L+G + EK
Sbjct: 590 EDGDRLLGWMLEK 602
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + L+ +V +N+++ + A + ++ ++ E + GI PD TY VI A+C
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRL 551
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM------- 247
D A+ +L EM + ++P +F L+ GF ED +++L M G+
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 248 ------------------------KSGVS----MYNVRIHSLCKLRKCAEAKALLDEMLS 279
GV+ YN+ I CK R EA L EM+
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG P +Y+ I F K EA++ + M GL + +Y V + GD E
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEI 731
Query: 340 ALGFCKESIAK 350
L C E+I K
Sbjct: 732 TLNLCDEAIEK 742
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 33/159 (20%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGM------------------------------- 282
+++ L ++ +EA+ LLD++LS G+
Sbjct: 193 FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY 252
Query: 283 --KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
N+ +Y+ IY C+ G +EA + M +P+ Y T++ C G+ + A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
L + KG PN T S++ L K EA++++
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 5/248 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG--IKP 179
+ NM AV F+ M SV N +L +L KD +EV + F + + P
Sbjct: 121 RENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSL--VKD-REVDLFWSFFKEMIANRVSP 177
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ T+N ++ A CE SA +L +MD P A ++ L+ + K+ +Y+ ++++
Sbjct: 178 NVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELI 237
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ + V YNV I LC+ + A+ +L M + PN +TY+ I G K+
Sbjct: 238 DAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKE 297
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G A K + MS L PNS Y T+++ C G+ E AL C ++ G PN T
Sbjct: 298 GKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTY 357
Query: 360 KSLVTGLA 367
+L+ G++
Sbjct: 358 GALLNGIS 365
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 1/234 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++MDE + +N LL YK + I+ + GI D+ TYN +I C
Sbjct: 202 LRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASEL-IDAMASKGIAADVCTYNVLIDDLC 260
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S S+ Y IL M + + PN ++ L+ G KE K KV + M +
Sbjct: 261 RKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSV 320
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C EA L D M+S G++PN VTY + G K F M
Sbjct: 321 TYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERM 380
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G+ Y TM+ +CK G E A+ + + P+ T LV G
Sbjct: 381 RMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGF 434
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TYN +I C + + A + M ++PN ++GAL+ G K ++ V+ V
Sbjct: 317 PNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSV 376
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM-------------------LS 279
L+ M G++ G Y I LCK EA LLD+M L
Sbjct: 377 LERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLK 436
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+ PN V +S IY +CK GN +EA Y +M+ SG + +V C+ G E
Sbjct: 437 TGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEE 496
Query: 340 ALGFCKESIAKGWVPNFTTMKSLV 363
A F G P+ T ++
Sbjct: 497 AEYFVDHMSRMGLAPSSVTFDCII 520
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ Y ++ + S +A + +M + ++P+A +F L+ + ++ K VN
Sbjct: 650 LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVN 709
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L M + ++ YN+ +H K A L +EM+ G P+ +T+ I G+
Sbjct: 710 DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G+ + A KF R ++ G + +V +C+ + + A K+ G PN
Sbjct: 770 CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV 829
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T SL G EA+ ++
Sbjct: 830 DTYNSLFNGFVRTCSFDEARCIL 852
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 110 ERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+R HS+IL Y ++ + AV+ +++ + N L+ L + E+K F
Sbjct: 758 DRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLC---ERNEIKMAF 814
Query: 169 --IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ G+ P++DTYN + F + A IL + P F L+ G
Sbjct: 815 DLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGM 874
Query: 227 YKEEKYEDVNKVLQMMERYGMKS-GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + ++ M+ G+ S GV+M + I L + RK EA +L ML + P
Sbjct: 875 CRMGNVKGAMELQDEMKILGVSSQGVAMSAI-IRGLARSRKTDEATRILGIMLEMQIIPT 933
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
T++ ++ +CK+GN +A + +M + + + Y ++ +C GD + A +
Sbjct: 934 VATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYE 993
Query: 346 ESIAKGWVPNFTTMKSLVTG-LAGASKVSEAKELIGLVKEKFTKNVDTWNEIE 397
E + PN + L+ L + + E+++L+ ++ + ++D IE
Sbjct: 994 EMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIE 1046
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 117/270 (43%), Gaps = 5/270 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA--VR 131
D +AF++ +++ S + ++ L +++R N ++I+L+G + A +
Sbjct: 688 DAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFN--LATYNILLHGYSKRHGMARCSK 745
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ EM H +++L+L + +V F+ G K D T N ++
Sbjct: 746 LYNEMIIHGFAPDRLTWHSLILGYCKSGSL-DVAVKFLRKITVEGFKVDCFTLNVLVSKL 804
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
CE ++ A+ ++ +++ + PN ++ +L GF + +++ +L + G
Sbjct: 805 CERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTC 864
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ I +C++ A L DEM G+ V S I G + +EA + I
Sbjct: 865 KQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGI 924
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
M + P + + T+++ CK G+ AL
Sbjct: 925 MLEMQIIPTVATFTTLMHTYCKEGNVAKAL 954
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F++M ++ AFN LL + +V + ++ + +L TYN ++
Sbjct: 673 ALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTM-RSRSLCFNLATYNILL 731
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + + + EM P+ ++ +L+ G+ K + K L+ + G K
Sbjct: 732 HGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFK 791
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
NV + LC+ + A L+ ++ G+ PN TY+ GF + +F+EA+
Sbjct: 792 VDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCI 851
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +G +P + T++ MC+ G+ + A+ E G M +++ GLA
Sbjct: 852 LHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLAR 911
Query: 369 ASKVSEAKELIGLVKE 384
+ K EA ++G++ E
Sbjct: 912 SRKTDEATRILGIMLE 927
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
PD TY +I C A + +++ + PN + + +LV G KE +
Sbjct: 616 PDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALY 675
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ + M G++ +NV + + K ++ +L M S+ + N TY+ ++G+
Sbjct: 676 MFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYS 735
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K K Y M G +P+ + +++ CK G + A+ F ++ +G+ +
Sbjct: 736 KRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCF 795
Query: 358 TMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T+ LV+ L +++ A +L+ L T NVDT+N + G
Sbjct: 796 TLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGF 839
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 28/340 (8%)
Query: 51 SESNPEKILEICRAA---ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
S N E+ L +C L P + + + +N +S+ F +S LE + R D
Sbjct: 331 SNGNIEEALRLCDVMVSHGLRP----NEVTYGALLNGISKHAQFGLVSSVLERM--RMDG 384
Query: 108 QNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+++ ++ G + + E AV+ +M L ++++ D
Sbjct: 385 VRVGHISYTTMIDGLCKNGLLEEAVQLLDDM----------------LKVSVSPDIVTFS 428
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+ F KT G+ P+ ++ +I +C+ + A + A M++ + + LVA
Sbjct: 429 VLVNGFLKT-GLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVAS 487
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
F + + E+ + M R G+ ++ I + +A ++ D+M S G P+
Sbjct: 488 FCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPS 547
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
TY + G G+ EAK F S+ + S+ Y TM+ + G+ A+
Sbjct: 548 QFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLD 607
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E + +VP+ T SL+ GL K+ A L G EK
Sbjct: 608 EMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEK 647
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N + F L+ +E D + ++M G V N+ + SL K R+ +
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
EM++ + PN T++ + C+ G F+ A R M +G P + Y T++ + CK
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
G Y+ A +KG + T L+ L S+ ++ L+ + KN+ N
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGY----LILRRMRKNMVYPN 283
Query: 395 EI 396
EI
Sbjct: 284 EI 285
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 8/325 (2%)
Query: 74 DRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D +I IN N + + + +L +PD + + G+ A+
Sbjct: 90 DVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIG---EAL 146
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F +M + +V + L+ L + E +F E GI PD+ TYN +I A
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM-IAKGISPDIFTYNSLIHA 205
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + ++L EM + I PN S +V KE K + + V+ MM + G++
Sbjct: 206 LCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPD 265
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y + C + EA + D M+ G N V+Y+ I G+CK ++A +
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFE 325
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M L PN+ Y T+++ +C G + A+ E +A G +PN T L+ L
Sbjct: 326 EMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNH 385
Query: 371 KVSEAKELIGLVK-EKFTKNVDTWN 394
+++EA L+ ++ +V +N
Sbjct: 386 RLAEAMALLKAIEGSNLDPDVQVYN 410
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 4/288 (1%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+++ N+ E H EM + K+ +V + N ++ AL E V ++
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDV-VDMMIQG 260
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TY ++ C S+ A + M R N S+ L+ G+ K ++ +
Sbjct: 261 GVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R + Y+ IH LC + + +A AL +EM++ G PN VTYS +
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ EA + + S L P+ VY + MC+ GD E A +G P+
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T ++ GL + EA +L + E +N T+N I GL Q
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQ 488
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 2/277 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A+ +F M + F LL ++ K Y V + + ++GI PD+ T
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM-DSFGIPPDVYT 93
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
VI +FC + A S+LA++ + +P+ ++F LV G K + V M
Sbjct: 94 LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V Y ++ LCK R+ EA L EM++KG+ P+ TY+ I+ C ++
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
M S + PN +V +CK G A I G P+ T +L+
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
G S++ EA ++ +V+ NV ++N + G
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLING 310
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 2/249 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V + AL+ + + E +VF + G ++ +YN +I +C+ A +
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMVRN-GCVCNVVSYNTLINGYCKIQRIDKAMYLF 324
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
EM R+ + PN ++ L+ G + +D + M G + Y++ + LCK
Sbjct: 325 EEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKN 384
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ AEA ALL + + P+ Y+ I G C+ G+ E A+ + ++ GL P+ +
Sbjct: 385 HRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTH 444
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVK 383
M+ +CK G + A +E G + N T ++ GL +K S A +L+ ++
Sbjct: 445 NIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLA 504
Query: 384 EKFTKNVDT 392
F+ +V T
Sbjct: 505 RGFSADVST 513
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV+ F M + +V ++N L+ + + +F E + I P+ TY+
Sbjct: 283 DEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI-PNTMTYST 341
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C A ++ EM PN ++ L+ K + + +L+ +E
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +YN+ I +C+ A+ L + +G++P+ T++ I G CK G +EA
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K +R M +G N Y T+ + + A+ +E +A+G+ + +T LV L
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Query: 367 AGASKVSEAKELI 379
+ K+++
Sbjct: 522 SDDGLDQSVKQIL 534
>gi|297810021|ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318731|gb|EFH49153.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1162
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 168/375 (44%), Gaps = 23/375 (6%)
Query: 23 ATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAI 82
A++ + + K+P+ S + + L+ S+S+P EI A+ P + ++ I I
Sbjct: 37 ASALVSNPSPKSPIGSPTRVQK---LIASQSDPLLAKEIFDYASQQPNFRHSQSSYLILI 93
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
KL A YFN I L + ++ + I +Y +A + E +RTF +M E
Sbjct: 94 LKLGRARYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKIPEKVLRTFYKMLEFNFT 153
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
N +L L + Y + + + +G+ P+ +YN +++AFC + D S AY
Sbjct: 154 PQPKHLNRILEVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNILMQAFCLNDDLSIAYQ 213
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM-------ERYGMKSGVSMYN 255
+ +M + + P+ S+ L+ GF ++ + ++L+ M +R + YN
Sbjct: 214 LFGKMLERDVVPDVESYKILIKGFCRKGQVNGAMELLEDMLNKGFVPDRLSCNPDLVHYN 273
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I C+ + +A+ +LD+ML+ I G C G F+E KK+ + M +
Sbjct: 274 TIILGFCREDRAMDARKVLDDMLT------------LIGGLCDQGMFDEGKKYLQEMISK 321
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G SP+ SV +V C G E A + + G + + T + ++ + + +
Sbjct: 322 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGEILHSDTWEMIIPLICKEDESEKI 381
Query: 376 KELI-GLVKEKFTKN 389
K + VKE+ T +
Sbjct: 382 KRFLEDAVKEEITGD 396
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M ++ +V FN LL +E ++ E T GI P++ TYN ++ +C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYC 344
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A ++L M R P+ +F +L+ G+ ++ +D KV + + + G+ +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + C+ K A+ L EM+S G+ P+ +TY + G C +G E+A + + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S + +Y T++ MCKGG E A KG PN T +++GL +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 373 SEAKELI 379
SEA L+
Sbjct: 525 SEANILL 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PD+ + I G T A ++M+E ++ V ++ ++ +L
Sbjct: 190 QPDMVTYNSIVNGICRSGD---TSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GIK + TYN +++ C++ + +L +M + I PN +F L+
Sbjct: 247 AISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K ++ N++ + M G+ + YN + C + +EA +LD M+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VT++ I G+C ++ K +R +S GL N+ Y +V C+ G + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E ++ G +P+ T L+ GL K+ +A E+ L K K + + I G+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 4/258 (1%)
Query: 147 AFNALLLALTI-AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
FN L+ L + K K V V ++ G +PD+ TYN ++ C S D+S A+ +L
Sbjct: 160 TFNTLINGLCLEGKVSKAV--VLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLR 217
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+M+ +++K + ++ ++ ++ + + + ME G+KS V YN + LCK
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K + LL +M+S+ + PN +T++ + F K+G +EA + Y+ M G+SPN Y
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKE 384
T++ C A + P+ T SL+ G +V + ++ + K
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 385 KFTKNVDTWNEIEAGLPQ 402
N T++ + G Q
Sbjct: 398 GLVANAVTYSILVQGFCQ 415
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
KL EAN + +E+ TR N + + Y N A M +K
Sbjct: 313 KLQEAN------ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ F +L+ + K + +VF K G+ + TY+ +++ FC+S A +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM + P+ ++G L+ G K E ++ + +++ M G+ MY I +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A L + KG+KPN +TY+ I G CK G+ EA R M G +PN
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y T++ + GD + +E + G+ + +++K ++ L
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 8/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDT 183
+ A+ F+EM + + F+ A+ K + V ++F K GI ++ T
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLV----LDFCKQLELNGIAHNIYT 125
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I FC + AYS+L ++ + +P+ ++F L+ G E K ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + + YN ++ +C+ + A +L +M + +K + TYS I C+DG +
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A ++ M G+ + Y ++V +CK G + K+ +++ VPN T L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
K+ EA EL ++ + N+ T+N + G
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+N +I C S A ++ M +P+ ++ ++V G +
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME +K+ V Y+ I SLC+ A +L EM +KG+K + VTY+ + G
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + + M + + PN + ++ K G + A KE I +G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T +L+ G +++SEA ++ L V+ K + ++ T+ + G
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
N+LSEAN + + K PD+ I Y + ++ F+ + + L
Sbjct: 347 NRLSEAN---NMLDLMVRNKCSPDIVT---FTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+ ++ L+ + K + +F E ++G+ PD+ TY ++ C++ A
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
I ++ + + + ++ G K K ED + + G+K V Y V I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K +EA LL +M G PN TY+ I +DG+ + K M + G S ++S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 2/279 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
AN +E K E+ + + ++N ++ +L KE R+ ++ PD+
Sbjct: 236 ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS-TPDVV 294
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+Y+ VI +C + A ++ +M K +KPN ++ +++ K K + KVL+ M
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ +Y IH KL A DEMLSK + P+ +TY+ I GF + G
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E + + M + GL P+ Y T++ CK G+ A E + G PN T +L
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ GL ++ A EL+ +++K NV +N + G+
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 1/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I + E+ +R +E + I +Y +A +A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLH 456
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + ++ + AL+ L + + E K G++ ++ YN ++ C+
Sbjct: 457 NEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQLNVCIYNSMVNGICK 515
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A ++ EM+ I P+A ++ ++ + + + +K+LQ M G++ V
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+NV ++ C L + LL ML KG+ P+++TY+ + C + K Y+ M
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
N G++P+S+ Y ++ CK + + A KE I KG+VP T+ +L+ K
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFX 695
Query: 374 EAKEL 378
EA+EL
Sbjct: 696 EAREL 700
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F EM K+ + L+ E + +F E + G+KPD TY +I
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI-SRGLKPDEVTYTTLI 440
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C++ + +A+S+ EM + + PN ++GAL+ G K + + N++L M + G++
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +YN ++ +CK +A L+ EM G+ P+++TY+ I +C+ G+ ++A K
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ M + GL P + ++ C G E + KG VP+ T +L+
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 138/313 (44%), Gaps = 3/313 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY-GQANMTEHAVRT 132
D +++S I+ + +++++ + L+ R+ +SIIL + + A +
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIK-GLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM K+ + L+ + + F E + I PD TY +I+ F
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFG 409
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ ++ EM + +KP+ ++ L+ + K + + + M + GM +
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LCK + A LLDEM KG++ N Y+ + G CK GN E+A K + M
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G+ P++ Y T++ C+ GD + A +E + +G P T L+ G +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGML 589
Query: 373 SEAKELIGLVKEK 385
+ L+G + EK
Sbjct: 590 EDGDRLLGWMLEK 602
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + L+ +V +N+++ + A + ++ ++ E + GI PD TY VI A+C
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRL 551
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM------- 247
D A+ +L EM + ++P +F L+ GF ED +++L M G+
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 248 ------------------------KSGVS----MYNVRIHSLCKLRKCAEAKALLDEMLS 279
GV+ YN+ I CK R EA L EM+
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
KG P +Y+ I F K F EA++ + M GL + +Y V + GD E
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEI 731
Query: 340 ALGFCKESIAK 350
L C E+I K
Sbjct: 732 TLNLCDEAIEK 742
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 33/159 (20%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGM------------------------------- 282
+++ L ++ +EA+ LLD++LS G+
Sbjct: 193 FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY 252
Query: 283 --KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
N+ +Y+ IY C+ G +EA + M +P+ Y T++ C G+ + A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
L + KG PN T S++ L K EA++++
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 115 HSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+SII+ Y + + E A F +M E + FN L+ A ++ ++F E
Sbjct: 246 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 305
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSS-SAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K G K + TYN +I + C+ +A + +++ + P ++ +L+ GF +
Sbjct: 306 KI-GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ + ME V Y++ I LCK+R+ EA L++M + G P VTY
Sbjct: 365 LSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GFCK G + A F+ M +G +PN+ ++ T++ +CK L A+G
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
P+ T L++GL A++V +A+ L G+ NV T+N + GL
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGL 530
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 151/319 (47%), Gaps = 17/319 (5%)
Query: 94 ISQYLEELKTRPDLQNERF----HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGA 147
I Q LK ++Q F +H+I+L G A A+ ++M + + G
Sbjct: 80 IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGT 139
Query: 148 FNALLLALTI----AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+N +L L A ++ F E K G++PDL++Y+ ++ A +S + A+++
Sbjct: 140 YNLVLKGLCWENKSANRLEQAMEFFKEM-KASGVEPDLESYHILLSALSDSGRMAEAHAL 198
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+ M + P+ ++ L+ G+ K + + +++ + + G + V Y++ I+ CK
Sbjct: 199 FSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCK 255
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
L K EA + +M+ PN+VT++ I GFCK G E+A K + M G
Sbjct: 256 LDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVT 315
Query: 324 YFTMVYFMCK--GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
Y T++ +CK GG Y TA+ + G P T SL+ G A ++SEA +
Sbjct: 316 YNTLIDSLCKKRGGVY-TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE 374
Query: 382 VKEKFTKNVDTWNEIEAGL 400
++ K NV T++ + GL
Sbjct: 375 MEGKCAPNVITYSILIDGL 393
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 111/291 (38%), Gaps = 44/291 (15%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
NALL L A+ + + R+F E P+ TYN +I+ FC+ A S+ ++M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGL-FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 209 RKSIKPNASSFGALVA-----------------------------------GFYKEEKYE 233
+ PNAS+ L+ GF+ +
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA----EAKALLDEMLSKGMKPNSVTY 289
D LQ M + YN+ + LC K A +A EM + G++P+ +Y
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ G EA + M+ SP+ Y ++ CK G A KE +
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
G+ PN T ++ KV EA E+ + +++ N T+N + AG
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 287
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N + L RK +A L E+L+ PN+ TY+ I GFCK G +A + M +
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
SGL PN+S T++ +C+ G +AL +E A ++P + L+ G A +V +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 375 A-KELIGLVKEKFTKNVDTWNEIEAGL 400
A L + K + T+N + GL
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGL 147
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL--KTRPDLQNERFHAHSIILYG 121
A LTP + ++ I +A + QY +E+ K P++ +SI++ G
Sbjct: 342 GAGLTPTI----VTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVIT-----YSILIDG 392
Query: 122 QANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + A +T ++M H +V + L+ + K +F E K G P
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSA-LLFFEKMKLAGCAP 451
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +N +I C++ ++ +L M + KP+ ++ L++G + ED ++
Sbjct: 452 NTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 511
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
M V+ +N I LC +K EA+ +LD
Sbjct: 512 DGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 152/352 (43%), Gaps = 35/352 (9%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+ + I+KL A F I + L ++K E + YG+AN+ A R +M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163
Query: 137 -DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+ + ++N +L L A VF E + G+ P + T+ V+KA C +
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEM-LSKGVIPTVYTFGVVMKALCMVN 222
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A S+L +M + PN+ + L+ K ++ + K+L+ M G V +N
Sbjct: 223 EVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFN 282
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS------------------------- 290
I+ LC+L + E L+D ML +G PN +TY
Sbjct: 283 DVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP 342
Query: 291 ---HF---IYGFCKDGNFEEAKKF-YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
HF I G+ K G +EA F Y M +G P+ + T+++ +CK G +A+
Sbjct: 343 NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDM 402
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ A G PN T +L+ G +++ EA ++ + K F N+ +N
Sbjct: 403 VNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 36/261 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T+N +I C+ SA ++ +M PN ++ L+ GF K+ + E+
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VL M G + + YNV + +LCK K +A +L EM KG KP+ T++ I+G
Sbjct: 435 GYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFG 494
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY-FM----------------------- 331
CK E+A YR M G+ N+ Y T+++ F+
Sbjct: 495 LCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLD 554
Query: 332 -----------CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI- 379
CK G E ALG E + K VP+ + L+ GL KV A EL+
Sbjct: 555 EITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLR 614
Query: 380 GLVKEKFTKNVDTWNEIEAGL 400
++ +V T+N + GL
Sbjct: 615 DMIHRGLAPDVVTYNSLINGL 635
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 141/326 (43%), Gaps = 13/326 (3%)
Query: 78 FSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
F+I IN +L EAN F + + + RPD+ H + G + AV
Sbjct: 347 FTILINGYVKSGRLDEANAF--LYDKMIKNGCRPDVFTFNTLIHGLCKKG---LMGSAVD 401
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+M + ++ + LL +E V E G + ++ YN +++A
Sbjct: 402 MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK-GFELNIMGYNVLLRAL 460
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A +L EM K KP+ +F L+ G K ++ ED + + M G+ +
Sbjct: 461 CKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANT 520
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN IH+ + EA L+++ML +G + +TY+ I FCK G E+A +
Sbjct: 521 VTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDE 580
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M L P++ ++ +C+ G AL ++ I +G P+ T SL+ GL
Sbjct: 581 MVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGN 640
Query: 372 VSEAKELIG-LVKEKFTKNVDTWNEI 396
+ EA L L E + T+N +
Sbjct: 641 IREAFNLFNKLQAEGIQPDAITYNTL 666
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 4/276 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + N E A EM ++ +N LL AL + + E G KP
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDK-GCKP 483
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ T+N +I C+ A ++ +M + N ++ L+ F + ++ K++
Sbjct: 484 DIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLV 543
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G YN I + CKL +A L DEM+ K + P++++ + I G C+
Sbjct: 544 NDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRV 603
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G A + R M + GL+P+ Y +++ +CK G+ A + A+G P+ T
Sbjct: 604 GKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITY 663
Query: 360 KSLVTGLAGASKVSEAKELI--GLVKEKFTKNVDTW 393
+L+ A +A L+ G V+ F N TW
Sbjct: 664 NTLICWHCRAGMFDDAYLLLLRG-VENAFIPNDVTW 698
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 1/236 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ EM + + + FN L+ L D KE G+ + TYN +I
Sbjct: 469 ALDMLGEMSDKGCKPDIFTFNTLIFGLC-KVDRKEDALALYRDMLLDGVIANTVTYNTLI 527
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
AF A ++ +M + + ++ L+ F K E + M R +
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
N+ I+ LC++ K A LL +M+ +G+ P+ VTY+ I G CK GN EA
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNL 647
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ + G+ P++ Y T++ + C+ G ++ A + ++PN T LV+
Sbjct: 648 FNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVS 703
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D TYN +IKAFC+ + A + EM RK + P+ S L+ G + K +
Sbjct: 550 GCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNA 609
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP----------- 284
++L+ M G+ V YN I+ LCK+ EA L +++ ++G++P
Sbjct: 610 LELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICW 669
Query: 285 ------------------------NSVTYSHFIYGFCKDGNFEEAKKF 308
N VT+ + F K+ E F
Sbjct: 670 HCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISF 717
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A+ ++M L V +N+L+ L + +E +F + + GI+PD TYN +
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL-QAEGIQPDAITYNTL 666
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
I C + AY +L + PN ++ LV+ F KE
Sbjct: 667 ICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 151/310 (48%), Gaps = 9/310 (2%)
Query: 101 LKTRPDLQNE----RFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
L+ D++N+ ++++I++ G + + A EM L+ + FN L+ A
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
E +F E P+ G KPD+ T+N +I CE + A +L +M + +
Sbjct: 463 FCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N ++ L+ F + + ++ K++ M G YN I LC+ + +A++L
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
++ML G+ P+S++ + I G C+ G EEA +F + M G +P+ + +++ +C+
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTW 393
G E L ++ A+G P+ T +L++ L V +A L+ +++ F N TW
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701
Query: 394 N-EIEAGLPQ 402
+ +++ +PQ
Sbjct: 702 SILLQSLVPQ 711
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 17/261 (6%)
Query: 153 LALTIAKDYK------EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
L ++I +DY + R+ +E Y +P +YN V++ + A ++ +
Sbjct: 142 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 201
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + I P +FG ++ + + VL+ M ++G +Y IHSL K +
Sbjct: 202 MLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNR 261
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA LL+EM G P++ T++ I G CK EA K M G +P+ Y
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------- 379
++ +CK G + A K+ + P +L+ G ++ +AK ++
Sbjct: 322 LMNGLCKIGRVDAA----KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377
Query: 380 GLVKEKFTKNVDTWNEIEAGL 400
G+V + T N + + GL
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGL 398
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ F E L+ + +N+L+ L +V E + G PD+ TYN
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE-GCHPDIWTYNI 425
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C+ + S A ++ + K P+ +F L+ G+ K K + ++++ M YG
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN ++ LCK K E +EM+ KG +PN++TY+ I FCK EEA
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA-LGFCK-------------------- 345
M GL P++ + T+++ C+ GD + A L F K
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605
Query: 346 --------------ESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNV 390
E I+KG+ P+ T + LV GL A+ V A L ++ + F ++
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSM 665
Query: 391 DTWNEI 396
T+ +
Sbjct: 666 ATFGRM 671
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 151/361 (41%), Gaps = 39/361 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFK 134
A+ I +L A + + L ++ PD + + SI Y +A AV F+
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSHLAPD-SLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
MD + A+NA++ AL A + + +V++ G+ PD T+ +K+FC +
Sbjct: 96 RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA-GVAPDARTHTVRLKSFCLT 154
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A +L + + +++ +V G Y + + M + V+ +
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATF 214
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMK------------------------------- 283
N +H+LC+ E+ ALL ++L +GM
Sbjct: 215 NNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA 274
Query: 284 ---PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
P+ VTY+ + G CKD +EA ++ M N G P+ Y T++ CK G + A
Sbjct: 275 YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
K+++ KG+VP+ T SL+ GL + A EL + K K ++ +N + G
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Query: 400 L 400
L
Sbjct: 395 L 395
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E TYGI PD+ TYN V+ C++ + EM K +PNA ++ L+ F
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 536
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + E+ + V+ M + G+ +N IH C+ A L ++ KG +
Sbjct: 537 KINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATAD 596
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I + N + A+K + M + G P+ Y +V +CK + + A E
Sbjct: 597 TFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEM 656
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
I+KG+VP+ T ++ LA +VSEA +I ++
Sbjct: 657 ISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C D A + E K +KP+ + +LV G ++
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V+ M G + YN+ I+ LCK+ ++A ++++ + KG P+ T++ I G
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M G++P+ Y +++ +CK G + +E I KG PN
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
T L+ +++ EA +I GLV + + N
Sbjct: 525 AITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFN 564
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ TYN +++ C+ S A L M + P+ ++ ++ G+ K ++
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++L+ G Y I+ LC A L +E +K +KP+ V Y+ + G
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ G A + M G P+ Y ++ +CK G+ A ++I KG++P+
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +L+ G K+ A +L+ + +V T+N + GL
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGL 500
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TYN +I +C+S A +L + K P+ ++ +L+ G E E
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + +K + +YN + LC+ A +++EM+ +G P+ TY+ I G
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING 429
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK GN +A G P+ + T++ CK ++AL + G P+
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489
Query: 356 FTTMKSLVTGLAGASKVSEAKE 377
T S++ GL A K E E
Sbjct: 490 VITYNSVLNGLCKAGKAKEVNE 511
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 9/287 (3%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSII-LYGQANMTE 127
H D ++I IN L + + + + + + PD+ F +++I Y + +
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV----FTFNTLIDGYCKRLKLD 472
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A++ + M + + V +N++L L A KEV F E G +P+ TYN +
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM-ILKGCRPNAITYNIL 531
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I+ FC+ + A ++ M + + P+A SF L+ GF + + + Q ++ G
Sbjct: 532 IENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 591
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ +N+ I + A+ + EM+SKG KP+ TY + G CK N + A
Sbjct: 592 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYA 651
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
M + G P+ + + M+ + A+ + G VP
Sbjct: 652 HLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PNSVT++ I G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 ITYTTLIDGCCKDGDLDTAFE 338
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK-WGLRPSVVSYNTLMNGYI 188
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD +TA K I + + +L++GL +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQS 368
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN+ +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CKDG+ + A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEH 339
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + VY ++ +C+ G A +E ++ G P+ T ++
Sbjct: 340 RKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
V + +L+ + ++ +V T+N + G
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 18/225 (8%)
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV---AGFYK 228
P + L +Y +I C S A S++ + + K +AS+ A + G +
Sbjct: 10 PANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQR 69
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAEAKAL 273
+ Y + +E ++ + Y + + L KL+
Sbjct: 70 SDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+E+L G + ++ ++ FCKDG+ A+ + ++ GL P+ Y T++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
GD + +A G P+ T L+ GL SK+ +A EL
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANEL 234
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 5/306 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F+ I N + +++ R Q+ +A I + + + AV F
Sbjct: 45 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELF 104
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EMD+ + + AL+ L A +E + + K G +P Y V+ C
Sbjct: 105 GEMDQPDMH----MYAALVKGLCKAGRGEE-GLLMLRRMKELGWRPSTRAYAAVVDFRCW 159
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM K + P + A++ + KE + D +VL++M+ G K V
Sbjct: 160 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 219
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + C K +A ALL++M G+ P++VTY+ I G C DG+ E A + R+M
Sbjct: 220 YNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 279
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL + Y ++ +CK G + A +G PN T SL+ GL + KV
Sbjct: 280 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVD 339
Query: 374 EAKELI 379
A + +
Sbjct: 340 IAWKFL 345
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 4/258 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
++EL RP + R +A + + A +EM E L V A++ A
Sbjct: 138 MKELGWRP---STRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCK 194
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ RV +E K G KP++ TYN +++ FC A ++L +M + P+A
Sbjct: 195 EGRMSDALRV-LELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAV 253
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G + E ++L++ME G+ + YN I++LCK + +A +L D +
Sbjct: 254 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 313
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
++G+KPN+VT++ I G CK G + A KF M ++G +P++ Y + + +CK
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 373
Query: 338 ETALGFCKESIAKGWVPN 355
+ L F E + K P+
Sbjct: 374 QEGLSFIGEMLQKDVKPS 391
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 14/320 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D ++++ I E + + E+ +PD+ H ++ ++ G +A E +
Sbjct: 80 DVVSYAALIEGFCETGRIDEAVELFGEMD-QPDM-----HMYAALVKGLCKAGRGEEGLL 133
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKA 190
+ M E R S A+ A++ + KE + + E F K G+ P + T VI A
Sbjct: 134 MLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEK--GLAPCVVTCTAVINA 191
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C+ S A +L M + KPN ++ ALV GF E K +L M G+
Sbjct: 192 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I C A LL M G+ + TY+ I CKDG ++A +
Sbjct: 252 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 311
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ G+ PN+ + +++ +CK G + A F ++ ++ G P+ T S + L
Sbjct: 312 SLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC--- 368
Query: 371 KVSEAKELIGLVKEKFTKNV 390
K+ ++E + + E K+V
Sbjct: 369 KMKGSQEGLSFIGEMLQKDV 388
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 5/218 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN VI++ C +D +SA L+ M R +P+A +F +L+ G+ + + + + M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G V Y I C+ + EA L EM +P+ Y+ + G CK G
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EE R M G P++ Y +V F C + A +E KG P T ++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
+ ++S+A ++ L+K + K NV T+N + G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 226
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D TYN +I A C+ + A S+ ++ + IKPNA +F +L+ G K K +
Sbjct: 282 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIA 341
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K L+ M G Y+ I LCK++ E + + EML K +KP++V Y+ I+
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 401
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+ N+ + + M +SG +P+ Y T + C G A E G +
Sbjct: 402 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 461
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
+L+ G A + A ++
Sbjct: 462 TMAYNTLMDGHASIGQTDHAVSIL 485
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 109/283 (38%), Gaps = 46/283 (16%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR--------------------- 186
+NA++ +L D R ++ G +PD T+N
Sbjct: 14 YNAVIRSLCRRADLASALR-YLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 187 --------------VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+I+ FCE+ A + EMD +P+ + ALV G K +
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ +L+ M+ G + Y + C RK EA+ +L EM KG+ P VT +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I +CK+G +A + +M G PN Y +V C G A+ + G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
P+ T L+ G + A L+ GL+ +++T N
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 291
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 143/347 (41%), Gaps = 27/347 (7%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQN-ERFHAHSIILYGQANMTEHAVR 131
+ F+ IN L ++ + ++LE++ + PD F H + G ++ +
Sbjct: 323 VTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG----SQEGLS 378
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM + ++ S + ++ L ++Y V R + E + G PD+ TY ++A+
Sbjct: 379 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS-GCNPDVVTYTTSMRAY 437
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A ++L EM + + + ++ L+ G + + +L+ M
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497
Query: 252 SMYNVRIHSLCKLR-----------------KCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
Y + + L ++R + + L D M PNS TYS +
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
GF +DG EEA +M +S N +Y +V CK Y A I G++P
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 617
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ + + L++GL + +AKE+ + K ++ + W I GL
Sbjct: 618 HLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 664
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 21/308 (6%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+++++ GQ E A R + M+ L +NAL+ AL + +F
Sbjct: 255 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL- 313
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+T GIKP+ T+N +I C+S A+ L +M P+ ++ + + K +
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 373
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ + M + +K Y + IH L K R EM+S G P+ VTY+
Sbjct: 374 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTS 433
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ +C +G EA+ MS +G++ ++ Y T++ G + A+ K+ +
Sbjct: 434 MRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 493
Query: 353 VPN----FTTMKSLV----------TGLAGASKVSEAKELIGLV----KEKFTKNVDTWN 394
VPN F ++ LV AG K E ++ GL K +F N T++
Sbjct: 494 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 553
Query: 395 EIEAGLPQ 402
I G +
Sbjct: 554 SILEGFSE 561
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/277 (17%), Positives = 116/277 (41%), Gaps = 22/277 (7%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
++I I+KL + + +++ E+ + PD+ + + G+ N E+
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN---VLM 451
Query: 135 EMDEHKLRHSVGAFNALL----------LALTIAKDYKEVKRV------FIEFPKTYGIK 178
EM ++ + A+N L+ A++I K V V FI ++
Sbjct: 452 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D ++ + + + + M + PN+ ++ +++ GF ++ + E+ +
Sbjct: 512 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 571
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ +M+ + +Y + CK ++ +A L+ M+ G P+ ++Y H + G
Sbjct: 572 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLIC 631
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+G ++AK+ + SP+ V+ ++ + K G
Sbjct: 632 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 668
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHK-----------LRHSVGA-FNALLLALTIAK 159
A++ ++ G A++ T+HAV K+M LRH V +L LT A
Sbjct: 464 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 523
Query: 160 DYK--EVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+K E+ VF + K P+ TY+ +++ F E + A S+++ M SI N
Sbjct: 524 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 583
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ALV F K ++Y D ++ M ++G + Y + L + +AK +
Sbjct: 584 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFM 643
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K P+ + + I G K G+ + +++ ++ P+ Y
Sbjct: 644 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 692
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 8/287 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+PD+ H ++ I+ G + E A FK+M E + V ++ ++ +L +
Sbjct: 7 QPDV-----HTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRV 61
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
E +F + K GI P++ TYN +I+ C S A ++L EM +I PN +F
Sbjct: 62 NEALDIF-SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ F KE + VL+ M G++ V Y+ ++ + EA+ L D M++KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KP+ +Y+ I G+CK EAK+ + M + GL+P+ Y T++ +C+ G A
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
K + G +P+ T L+ G +++A L ++ + K
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 287
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ TY +I C+ ++ +A + +M +P+ ++ ++ K+ + +
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G+ + YN I LC + EA A+L+EM+S + PN VT+S I
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK+GN EA+ + M+ G+ PN Y +++ + A I KG P+
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+ L+ G A ++ EAK+L ++ + T ++ ++N + GL Q
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 232
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 139/330 (42%), Gaps = 46/330 (13%)
Query: 64 AAALTPESHLDRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILY 120
A P+ H ++ IN K+ E G+ + + E +PD+ S+
Sbjct: 3 ARGYQPDVH----TYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKD 58
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+ N A+ F M + ++ +N+L+ L ++E + E + I P+
Sbjct: 59 RRVN---EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM-MSLNIMPN 114
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ T++ +I FC+ + A +L M ++PN ++ +L+ G+ + + + K+
Sbjct: 115 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFD 174
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV------------- 287
+M G K V YN+ I+ CK ++ EAK L +EM+ +G+ P+ V
Sbjct: 175 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 234
Query: 288 ----------------------TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
TYS + GFCK G +A + +R M ++ L PN +Y
Sbjct: 235 RLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 294
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPN 355
++ MCK + + A E +G PN
Sbjct: 295 ILIDAMCKSRNLKEARKLFSELFVQGLQPN 324
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 94/252 (37%), Gaps = 71/252 (28%)
Query: 76 LAFSIAINKLS-EANYF--NGISQYLEELKTRPD------------LQNERFHA------ 114
+ FS+ IN E N F G+ + + E+ P+ LQ E F A
Sbjct: 116 VTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDV 175
Query: 115 ------------HSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
++I++ Y +A A + F EM L + ++N L+ L
Sbjct: 176 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 235
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+E +F T G PDL TY+ ++ FC+ + A+ + M +KPN
Sbjct: 236 LREAHDLFKNM-LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPN----- 289
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+ MYN+ I ++CK R EA+ L E+ +
Sbjct: 290 ------------------------------MVMYNILIDAMCKSRNLKEARKLFSELFVQ 319
Query: 281 GMKPNSVTYSHF 292
G++PN + F
Sbjct: 320 GLQPNMKHWKLF 331
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V + E + G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + + S+ + + ++P+ SF L+ G+ ++ +
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K EA L EML KG+ PN VT++ I G
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 18/278 (6%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ + + + VF K +G++P + ++N ++ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRK-WGLRPSVVSFNTLMNGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGV 251
D + + + M ++P+ ++ L+ G KE K ++ N++ +M+++ + +GV
Sbjct: 183 RQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGV 242
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ + I CK K A + +MLS+ + P+ +TY+ IYG CK G+ ++A+
Sbjct: 243 T-FTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL P+ Y T++ CK GD ETA + K I + + +L++GL +
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGR 361
Query: 372 VSEAKEL------IGL---------VKEKFTKNVDTWN 394
+A+++ +GL + +F K D W
Sbjct: 362 SVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWT 399
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F + + LR SV +FN L+ D + R+ + G++PD+ TY+ +I
Sbjct: 158 VFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHAS-GVQPDVYTYSVLINGL 216
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ S A + EM K + PN +F L+ G K K + ++ + M + +
Sbjct: 217 CKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDL 276
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE-------- 303
YN I+ LCK +A+ L++EM KG+KP+ +TY+ I G CKDG+ E
Sbjct: 277 ITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKR 336
Query: 304 ---------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+A+K R M + GL P+S Y ++ CK GD
Sbjct: 337 MIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGD 396
Query: 337 YETALGFCKESIAKGWVPNFTT 358
T KE G VP+ T
Sbjct: 397 VWTGSKLLKEMQRDGHVPSVVT 418
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 71/183 (38%)
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
DS+SA + + + + F L+ + + D + ++ + +
Sbjct: 46 DSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCR 105
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ L KL+ E+L G + ++ ++ FCK+G ++ + +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKW 165
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ + T++ + GD + A G P+ T L+ GL SK+ EA
Sbjct: 166 GLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225
Query: 376 KEL 378
EL
Sbjct: 226 NEL 228
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ + EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++S V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+ + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++ D+ TY+ +I C++S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDV 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M + GL P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ C+ GD T L KE G++P+ T
Sbjct: 380 EIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 86/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++++ + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G + T L+ GL ASK+ +A EL
Sbjct: 198 QASGVQSDVYTYSVLINGLCKASKMDDANEL 228
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 110 ERFHAHSIIL----YGQA-NM-TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+ F A+SII+ + A N+ T FK ++ L+ SV + N L+ L K YK
Sbjct: 142 DSFCANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGL--VKMYKA 199
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
++ K GI P+ T+N +I FC + S A + AEM+R+ +KPN ++ +L+
Sbjct: 200 --DAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLI 257
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G K + + M ++ + +N ++ CK + +A L ++M + +
Sbjct: 258 NGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRIT 317
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN TY+ I +CKD N E+A YRIM G+ P+ S Y ++ +C+ GD E A
Sbjct: 318 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNR 377
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E K + T L+ L ++ + L+
Sbjct: 378 VSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLL 413
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
KEM + + FN L+ K+ +VF E + G+KP++ TYN +I C
Sbjct: 203 LKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQ-GVKPNVVTYNSLINGLC 261
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A ++ +M ++PN + AL+ GF K + + ++ + M + + V+
Sbjct: 262 NNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVT 321
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ I + CK +A AL ML KG+ P+ TY+ I G C+ G+ E A+ M
Sbjct: 322 TYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEM 381
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
L + Y ++ +C G+ + L E KG P+ T +++ G
Sbjct: 382 DTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDG 434
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 144/344 (41%), Gaps = 54/344 (15%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK-EMDEHKLRHSVGAFNALLLA 154
QY ELKT N H ++ G ++ +R F E KL HS+ +L +
Sbjct: 47 QYWSELKTHLKSTNPIALLHQLLTSGAD--SDLTLRYFTWSQKELKLSHSLELTFRMLHS 104
Query: 155 LTIAKDYKEVKRVFIE--------FPKTY---GIKPDLDTY--NRVI------------- 188
L AK Y ++ R F++ +P ++ I D++ N +I
Sbjct: 105 LAYAKKYSKI-RSFLDNCVQNDKNYPVSFIFHAISVSGDSFCANSIIVDILVWADAKNLK 163
Query: 189 -----KAFCESSDSS-------------------SAYSILAEMDRKSIKPNASSFGALVA 224
+AF +SD A +IL EM I PN +F L+
Sbjct: 164 TRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKMYKADAILKEMKADGICPNEVTFNILID 223
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
GF ++ KV M R G+K V YN I+ LC K EA L D+M++ ++P
Sbjct: 224 GFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEP 283
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
N +T++ + GFCK+ ++A + + M ++PN + Y ++ CK + E A
Sbjct: 284 NIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALY 343
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ + KG P+ +T L+ GL + A+ + + K K
Sbjct: 344 RIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLK 387
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+M L ++ NALL K K+ +F + PK I P++ TYN +I A+C+
Sbjct: 275 QMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQR-ITPNVTTYNILIDAYCKD 333
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A+++ M K + P+ S++ L+ G ++ E + M+ +K+ + Y
Sbjct: 334 ENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITY 393
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
N+ + SLC + + LLDEM KG+KP+ +TY+ I G+ K+GN +
Sbjct: 394 NILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ F EM+ ++ +V +N+L+ L E + + + ++P++ T+N ++
Sbjct: 234 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNS-CLEPNIITHNALL 292
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ A + +M ++ I PN +++ L+ + K+E ED + ++M G+
Sbjct: 293 NGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVY 352
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
VS YN I LC+ A+ + EM +K +K + +TY+ + C G ++ +
Sbjct: 353 PDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRL 412
Query: 309 YRIMSNSGLSPNSSVYFTMV 328
M GL P+ Y TM+
Sbjct: 413 LDEMCKKGLKPSQLTYNTMI 432
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 122 QANMTEHAVRTFKEMDEHK-LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+A + A F EM E + + + ++ A++ AL A + E + G++P
Sbjct: 197 RAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRA-GLQPT 255
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN ++ A C+S A+ + M++ + P+ +FG L+ G + E++ +V VLQ
Sbjct: 256 VVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQ 315
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME+ G+ +YN I C+ C++A L DEM+ K MKP +VTY+ CK+G
Sbjct: 316 EMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEG 375
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYF------------------------------ 330
E A++ M + G++ + ++ T+V +
Sbjct: 376 EMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLM 435
Query: 331 ------MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+CKGG ++ A+G +++ KG N T +L+ GL + EA ++I
Sbjct: 436 TACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVI 490
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 8/278 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A++ +M + + FN LL A +E + + KT G++PD+ +Y
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM-KTEGLQPDIVSYGT 577
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ D A L E+ + +KPN + AL+ G+ + ++ M+ G
Sbjct: 578 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 637
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ Y ++ +C EAK + + + + Y+ I G+CK G EA
Sbjct: 638 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 697
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M + G+SPN Y T++Y K G+ E A E + G +P+ T +L+
Sbjct: 698 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI--- 754
Query: 367 AGASKVSEAKELIGLVKE----KFTKNVDTWNEIEAGL 400
A S+V+ + IG E TK+ +N + G+
Sbjct: 755 ARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGI 792
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E V EM +R + A + L ++E ++ + G+ +L T N
Sbjct: 414 ESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFK-TLNKGLGVNLATSNA 472
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I CE A ++ M K I+ ++ ++ ++ G K+ K E+ K+ M R G
Sbjct: 473 LIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K + +N +H+ C L K E LLD+M ++G++P+ V+Y I G CK + +AK
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK 592
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ + + GL PN +Y ++ + GD A+ + + G P T SL+ +
Sbjct: 593 EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWM 652
Query: 367 AGASKVSEAKELIGLVKEKFTKNVD 391
A V EAK + +E NVD
Sbjct: 653 CHAGLVEEAKTIFSQARE---NNVD 674
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 133/343 (38%), Gaps = 35/343 (10%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F I IN L+ F + L+E++ NE + I + + A+R F E
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE 351
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---------------------- 173
M K++ + +N + AL + + +R+ +
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTR 411
Query: 174 -------------TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
T G++P+ ++ C+ A I + K + N ++
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN 471
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
AL+ G + + ++ KV+Q M G++ YN+ I CK K EA L +M +
Sbjct: 472 ALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 531
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G KP+ T++ ++ +C G EE M GL P+ Y T++ CK D A
Sbjct: 532 GFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKA 591
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+ E + +G PN +L+ G +S A + + +K
Sbjct: 592 KEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMK 634
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 5/260 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
EH F + + R N LL L K E V ++ G PD +YN
Sbjct: 111 EHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNI 170
Query: 187 VIKAFCESSDSSSAYSILAEMDRK---SIKPNASSFGALVAGFYKEEKYED-VNKVLQMM 242
++K C + A +L M S PN S+ ++ GF+ E + + N L+MM
Sbjct: 171 LLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMM 230
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+R G+ V Y I LCK + A+A+ +M+ G+KPN TY+ I+G+ G +
Sbjct: 231 DR-GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKW 289
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+E + MS G PN Y +++ ++CK G A F I KG P+ TT +
Sbjct: 290 KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM 349
Query: 363 VTGLAGASKVSEAKELIGLV 382
+ G A +SE +L+ L+
Sbjct: 350 LHGYATKGALSEMHDLLNLM 369
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ PD +Y +I A C+ A +M + + P+ F +LV G +K+
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E V ++ M G+ + +N + +LCK + E + L+D + G++P+ ++Y+
Sbjct: 465 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 524
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C G +EA K M + GL P+S Y T+++ CK G ++A ++ ++ G
Sbjct: 525 IDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGI 584
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
P T +++ GL + SEAKEL + ++ ++ T+N I GL
Sbjct: 585 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 142/311 (45%), Gaps = 12/311 (3%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRH---SVGAFNA 150
Q + EL PD +++I+L G N E A+ M + ++ +V +++
Sbjct: 154 QRMPELGCMPDTV-----SYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ + +F+E GI PD+ TY VI C++ A ++ +M
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDR-GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+KPN ++ L+ G+ K+++V ++L+ M G K Y ++ LCK +C EA
Sbjct: 268 GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ D M+ KG+KP+ TY ++G+ G E +M +G+SPN ++
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSA 387
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK-ELIGLVKEKFTKN 389
K G + A+ + +G P+ + +L+ L +V +A+ + ++ E T +
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447
Query: 390 VDTWNEIEAGL 400
+ ++ + GL
Sbjct: 448 IVVFSSLVYGL 458
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA-LTIAKDYKEVKRVFIEFPKTYGIKPD 180
+A + + A F++M ++ ++ ++ +N L+ L+I K +KEV R+ E G KP+
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK-WKEVVRMLEEMSAG-GPKPN 307
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TY ++ C++ A M K IKP+ +++G ++ G+ + +++ +L
Sbjct: 308 CCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN 367
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+M G+ ++N+ + K +A + ++M +G+ P++V+Y I CK G
Sbjct: 368 LMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLG 427
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++A+ + M N G++P+ V+ ++VY +C +E E + G PN
Sbjct: 428 RVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFN 487
Query: 361 SLVTGLAGASKVSEAKELI 379
+++ L +V E + L+
Sbjct: 488 TILCNLCKEGRVMEGQRLV 506
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + V + ++ L A+ + + VF + G+KP++DTYN +I +
Sbjct: 226 FLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN-GVKPNIDTYNCLIHGYL 284
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+L EM KPN ++G+L+ K + + M G+K V+
Sbjct: 285 SIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVT 344
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + +H +E LL+ M++ G+ PN ++ F + K G ++A + M
Sbjct: 345 TYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM 404
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
GLSP++ Y ++ +CK G + A + I +G P+ SLV GL K
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464
Query: 373 SEAKEL 378
+ +EL
Sbjct: 465 EKVEEL 470
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 116 SIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
S ++YG + E F EM + ++ FN +L L E +R+ ++ +
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL-VDSIE 510
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G++PD+ +YN +I C + A +L M +KP++ S+ L+ G+ K + +
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ M G+ GV YN +H L + ++ +EAK L M++ G K + TY+ +
Sbjct: 571 SAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIIL 630
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G CK +EA K ++ + + GL N + M+ + KGG E A+ A G V
Sbjct: 631 NGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 690
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
N T + +V L + E L +++ T
Sbjct: 691 QNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGT 724
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A+ F +M + L ++ AL+ AL + + F + G+ P
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE-GVTP 446
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ ++ ++ C + EM I PN F ++ KE + + +++
Sbjct: 447 DIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 506
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+E G++ V YN I C EA LL+ M+S G+KP+S +Y+ ++G+CK
Sbjct: 507 DSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKA 566
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + A +R M ++G++P Y T+++ + + + A I G + T
Sbjct: 567 GRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTY 626
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
++ GL ++ V EA ++ L + N+ T+N
Sbjct: 627 NIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 1/255 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R ++ +R V ++N L+ +A E ++ +E + G+KPD +YN ++
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL-LEGMVSVGLKPDSFSYNTLLHG 562
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ SAYS +M I P ++ ++ G ++ +++ + ++ M G K
Sbjct: 563 YCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWD 622
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN+ ++ LCK EA + + SKG++ N +T++ I K G E+A +
Sbjct: 623 IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ +GL N Y +V + + G E G PN + +LV L
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Query: 371 KVSEAKELIGLVKEK 385
+S A + + E+
Sbjct: 743 DISRAGAYLSKLDER 757
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 37/279 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A++ F E+ H SV AFN LL A++ + +
Sbjct: 33 ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRST------------------------ 68
Query: 189 KAFCESSDSSSAYSILAEMDRKS---IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+S+S + S+ M R + PN ++ L+ F + E ++ +
Sbjct: 69 -----TSESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKT 123
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEA-KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G + + N ++ LC ++ EA LL M G P++V+Y+ + G C + EE
Sbjct: 124 GWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEE 183
Query: 305 AKKFYRIMSNSGL---SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A + +M++ + PN Y T++ G + E + +G P+ T +
Sbjct: 184 ALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTT 243
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
++ GL A A+ + ++ N+DT+N + G
Sbjct: 244 VIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHG 282
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 14/268 (5%)
Query: 79 SIAINKLSEANYFNG--ISQYLEELKTRPDL--QNERFHAHSIILYGQANMTEHAVRTFK 134
+I N E G + +E + RPD+ N H + A + A + +
Sbjct: 488 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL-----AGTIDEASKLLE 542
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK--TYGIKPDLDTYNRVIKAFC 192
M L+ ++N LL A + + F K + GI P + TYN ++
Sbjct: 543 GMVSVGLKPDSFSYNTLLHGYCKAG---RIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ S A + M K + ++ ++ G K ++ K+ Q + G++ +
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N+ I +L K + +A L + + G+ N VTY + ++G+ EE + M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+G +PNS + +V + GD A
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRA 747
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 5/227 (2%)
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
PK Y I + ++ + KA AYS+ EM K + P+ ++ ++ G ++
Sbjct: 785 LPKKYRILNEANSSALIKKA----RRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 840
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++ + ++ M + + YN+ ++ LCK EA + + SKG++ N +T++
Sbjct: 841 RFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFN 900
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I K G E+A + + +GL P+ Y + + + G E G
Sbjct: 901 IMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKS 960
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
G + + +LV L +S A + + EK F+ T +E+
Sbjct: 961 GTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSEL 1007
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 87/203 (42%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN ++ ++ S A + M + N ++ ++ G K ++
Sbjct: 821 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEA 880
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ Q + G++ + +N+ I +L K + +A L + + G+ P+ VTY
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
++G+ EE + M SG +S + +V + + GD A + + K +
Sbjct: 941 LIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLE 1000
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
+T L++ + AK L
Sbjct: 1001 ASTTSELISLFSRGEYQHHAKSL 1023
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 161/342 (47%), Gaps = 14/342 (4%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
+ PE++ ++ IN + F+G+ L+ +K + N+ + + L +
Sbjct: 254 GIKPEAY----TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGK 309
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDT 183
A + F EM E + V + +L+ + K +KR F+ F + G+ P T
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLI-SWNCRKG--NMKRAFLLFDELTEKGLSPSSYT 366
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ + +A ++ EM K + F L+ G+ ++ ++ + + +ME
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G ++ V N +L++ EAK L M+ G+K ++V+Y++ I +CK+GN E
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EAK+ + MS+ G+ PN+ Y M+Y CK G + A A G P+ T SL+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 364 TGLAGASKVSEAKEL---IGLVKEKFTKNVDTWNEIEAGLPQ 402
G A V EA L +GL + +N T+ + +GL +
Sbjct: 547 HGECIADNVDEAMRLFSEMGL--KGLDQNSVTYTVMISGLSK 586
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 6/281 (2%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--G 176
+Y M E +R F M + L S+ + ++ L AK + + F + G
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGL--SIDERSCIVF-LVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+K + + V++ C + + ++ E K IKP A ++ ++ + K+ + V
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
VL++M++ G+ Y + + K K ++A+ L DEM +G++ + Y+ I
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ GN + A + ++ GLSP+S Y ++ +CK G+ A E +KG
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
+L+ G V EA + ++++K F +V T N I
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D+ T N + F A L M +K + S+ L+ + KE E+
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G++ YNV I++ CK K EA+ L M + GM P+S TY+ I+G
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C N +EA + + M GL NS Y M+ + K G + A G E KG+ +
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 356 FTTMKSLV 363
+L+
Sbjct: 609 NKVYTALI 616
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ + I +Y + E A R F EM ++ + +N ++ A KE +++
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ PD TY +I C + + A + +EM K + N+ ++ +++G K K
Sbjct: 532 AN-GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++ + M+R G +Y I S+
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K + ++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K + ++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGCMPS 415
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
Q ++EL RP R +A + L+ + E A + EM ++ L A++ A
Sbjct: 254 QKMKELGWRP---ATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
RVF E K G +P++ TYN +++ FC A ++L +M ++P+
Sbjct: 311 CREGRMSGAVRVF-ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPD 369
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G + E ++L++ME G+ + YNV I +LCK K EA +L D
Sbjct: 370 VVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ +G++PNSVT++ I G CK G F+ A F M ++G +P++ Y + +CK
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTK 489
Query: 336 DYETALGFCKESIAKGWVPN 355
L F E + K P+
Sbjct: 490 GSREGLSFIDEMLQKDVKPS 509
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 12/319 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVR 131
D ++++ I E + + EL+ +PD+ + H+ ++ G A E +
Sbjct: 198 DAVSYAALIEGFCETGRVDEALELFRELE-QPDM-----YTHAALVKGLCDARRGEEGLY 251
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
++M E R + A+ AL+ + +E +++ E G+ P T V+ A+
Sbjct: 252 MLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDN-GLVPCAVTCTAVVNAY 310
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S A + M K +PN ++ A+V GF K +L M G++ V
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I C A LL M G+ + TY+ I CK G +EA +
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ G+ PNS + T++ +CKGG ++ A F ++ ++ G P+ T + L K
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC---K 487
Query: 372 VSEAKELIGLVKEKFTKNV 390
++E + + E K+V
Sbjct: 488 TKGSREGLSFIDEMLQKDV 506
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 7/277 (2%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGA-FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+T +R F M H GA +NAL+ AL D + +R ++ G +PD T
Sbjct: 108 LTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQR-YLSLMVRSGWRPDAFT 166
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N +I +C + A + +M + +A S+ AL+ GF + + ++ ++ + +E
Sbjct: 167 FNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE 226
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ M + ++ + LC R+ E +L +M G +P + Y+ + +C++ E
Sbjct: 227 QPDMYTHAAL----VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAE 282
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA+K M ++GL P + +V C+ G A+ + KG PN T ++V
Sbjct: 283 EAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMV 342
Query: 364 TGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
G KV +A L+ ++E +V T+N + G
Sbjct: 343 QGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
AVR F+ M +V +NA++ + K YK + ++ + G++PD+ TYN +
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM--ALLDQMRECGVEPDVVTYNLL 376
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I+ C SA+ +L M+ + + ++ L+ K K ++ + +E G+
Sbjct: 377 IRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ +N I+ LCK K A L++M+S G P++ TYS FI CK E
Sbjct: 437 RPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLS 496
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
F M + P++ Y ++ + K +Y A + ++ G P+ T + V
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYC 556
Query: 368 GASKVSEAKELI 379
++ EA+ ++
Sbjct: 557 NEGRLHEAENVV 568
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +M E + V +N L+ I + R+ + + G+ D TYN +I
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL-LRLMEGNGLAADQYTYNVLI 412
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C++ A S+ ++ + I+PN+ +F ++ G K K++ L+ M G
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCA 472
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y+ I +LCK + E + +DEML K +KP++V Y+ I K+ N+ A +
Sbjct: 473 PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRI 532
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + G SP+ Y T V C G A E G + + +L+ G
Sbjct: 533 WGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTS 592
Query: 369 ASKVSEAKELI 379
K A ++
Sbjct: 593 IGKTDHAVTIL 603
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 12/265 (4%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ E PD+ +++++ GQ E A R + M+ + L +N L+ AL
Sbjct: 361 MRECGVEPDVVT-----YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415
Query: 156 TIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
E +F +E+ GI+P+ T+N VI C+ A + L +M
Sbjct: 416 CKTGKVDEACSLFDGLEY---RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCA 472
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ ++ + K + + + M + +K Y + I L K R A +
Sbjct: 473 PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRI 532
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+M+S G P+ VTY+ + +C +G EA+ M G+ ++ Y T++
Sbjct: 533 WGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTS 592
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
G + A+ K +PN T
Sbjct: 593 IGKTDHAVTILKHMTGVASMPNHFT 617
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A F ++ +R + FN ++ L + +V F+E + G PD TY+
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF-DVACTFLEKMVSAGCAPDTYTYS 479
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
I+ C++ S S + EM +K +KP+ ++ ++ +KE Y ++ M
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V Y + + C + EA+ ++ EM G+ +++ Y+ I G G + A
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599
Query: 306 KKFYRIMSNSGLSPNSSVYF 325
+ M+ PN +F
Sbjct: 600 VTILKHMTGVASMPNHFTFF 619
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 139/348 (39%), Gaps = 30/348 (8%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ IN L + F+ +LE++ + + ++ I + + + E
Sbjct: 441 VTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDE 500
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ S + ++ L ++Y R++ + + G PD+ TY ++A+C
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM-VSLGCSPDVVTYTTSVRAYCNEG 559
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV-SMY 254
A +++ EM + I +A ++ L+ G K + +L+ M +GV SM
Sbjct: 560 RLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM------TGVASMP 613
Query: 255 N---------------------VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
N ++ S+ K + A+ L + M + ++ Y +
Sbjct: 614 NHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAIL 673
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GF ++ +E M L N +Y ++V CK Y A I G++
Sbjct: 674 EGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFL 733
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
PN + + L++G + AKE+ GL +++ + W I GL
Sbjct: 734 PNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGL 781
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ G + T A F+E+ E+ A+NALL K+ + V E K G
Sbjct: 299 ILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKA-G 357
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD TY+ +I A+ + SA +L EM+ +++PN+ + ++A + + +++
Sbjct: 358 VKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSF 417
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+VL+ M+ G++ YNV I + K A A + MLS+G++P++VT++ I
Sbjct: 418 QVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCH 477
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G A++ + M G SP + Y M+ M + +E F + ++G +PN
Sbjct: 478 CKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNS 537
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
T +LV + + S+A E + ++K K T
Sbjct: 538 ITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTST 573
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E+ +PD E+ ++ I Y A E A KEM+ + + ++ +L +
Sbjct: 353 MEKAGVKPD---EQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRD 409
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
++++ +V + K+ G++PD YN +I F + + A + M + I+P+
Sbjct: 410 KGEWQKSFQVLKDM-KSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTV 468
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ K ++ ++ M++ G ++ YN+ I+S+ + ++ + L +M
Sbjct: 469 TWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKM 528
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
S+G+ PNS+TY+ + + K G F +A + ++ ++G P S++Y ++ + G
Sbjct: 529 QSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLS 588
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
E A+ + +G P+ + SL+ + +EA ++ +KE
Sbjct: 589 ELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 635
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 138/295 (46%), Gaps = 9/295 (3%)
Query: 104 RPDLQNERFHAHSIILY-GQANMTEHAV--RTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+PD N SII Y ++N + + + + E++ K+ N ++L + A D
Sbjct: 217 QPDFVN----YSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGD 272
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
R F+ ++ G+ P T VI A S + A ++ E+ +P ++
Sbjct: 273 PTRAMR-FLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYN 331
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
AL+ G+ K +D V+ ME+ G+K Y++ I + + A+ +L EM +
Sbjct: 332 ALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS 391
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
++PNS YS + + G ++++ + + M ++G+ P+ Y M+ K + A
Sbjct: 392 NVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHA 451
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ + +++G P+ T +L+ + + + A+EL G ++++ ++ + T+N
Sbjct: 452 MATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYN 506
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 117/267 (43%), Gaps = 11/267 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFH 113
++L+ ++ + P+ H +++ I+ + N + E + + RPD
Sbjct: 418 QVLKDMKSNGVQPDRHF----YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTL 473
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+ G+ NM E F EM + + +N ++ ++ + +++V +F+ +
Sbjct: 474 INCHCKSGRHNMAEE---LFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVS-LFLSKMQ 529
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G+ P+ TY ++ + +S S A L + KP ++ + AL+ + + E
Sbjct: 530 SQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSE 589
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
++M G+ + N I++ + R+ AEA A+L M ++P+ VTY+ +
Sbjct: 590 LAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLM 649
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPN 320
+ F++ Y M SG +P+
Sbjct: 650 KALIRVEKFQKVPAVYEEMVTSGCTPD 676
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA--KKFYRI 311
YN I + + +A L+ +M G +P+ V YS I + + +K Y
Sbjct: 188 YNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTE 247
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + + + ++ K GD A+ F + + G P +T+ +++ L + +
Sbjct: 248 IETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGR 307
Query: 372 VSEAKELIGLVKE 384
EA+ L ++E
Sbjct: 308 THEAEALFEEIRE 320
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A + F +M ++ + N LL VKR F + G KP + TY
Sbjct: 78 MLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGA-GSKPTVFTY 136
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I + D +A + EM + + P+ ++ +++ G+ K + +D + M+
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ V YN I+ CK K + EM G+KPN V+YS + FCK+ ++
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A KFY M G PN Y ++V CK G+ A E + G N T +L+
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
GL A ++ EA++L G +V N+ ++N + G
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGF 353
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 11/267 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDL 181
E A F+EM L +N+++ Y +V R+ F E K+ +PD+
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMI------DGYGKVGRLDDTVYFFEEMKSMSCEPDV 203
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC+S EM + +KPN S+ LV F KE+ + K
Sbjct: 204 ITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVD 263
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G Y + + CK+ ++A L +EML G++ N VTY+ I G C
Sbjct: 264 MRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAER 323
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA+K + M +G+ PN + Y +++ K + + AL E +G P+ +
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTK 388
+ GL G K+ AK ++ ++E K
Sbjct: 384 FIWGLCGLEKIEAAKVVMNEMQENGIK 410
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 142/317 (44%), Gaps = 9/317 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSII-LYGQANMTEHA 129
D + ++ I+ + + + EE+K+ PD+ +S+I + ++
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDV----ITYNSLINCFCKSGKLPKG 222
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ ++EM + L+ +V +++ L+ A ++ + +++ + G P+ TY ++
Sbjct: 223 LEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRV-GHVPNEFTYTSLVD 281
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A C+ + S A+ + EM ++ N ++ AL+ G E+ ++ K+ M G+
Sbjct: 282 ANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
++ YN IH K + A LL+E+ +G++P+ + Y FI+G C E AK
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVM 401
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M +G+ N+ +Y T++ K G+ L +E T L+ GL
Sbjct: 402 NEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKN 461
Query: 370 SKVSEAKELIGLVKEKF 386
VS+A + G + F
Sbjct: 462 KLVSKAIDYFGRMSNDF 478
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R EM E + +V + AL+ L A+ KE +++F + T G+ P+L +YN +I
Sbjct: 292 AFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM-VTAGVIPNLASYNALI 350
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ + A +L E+ + I+P+ +G + G EK E V+ M+ G+K
Sbjct: 351 HGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIK 410
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEM------------------------LSK---- 280
+ +Y + + K E LL+EM +SK
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDY 470
Query: 281 --------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
G++PN+ Y+ I G CK+ + A + M+ GL P+ + Y +++
Sbjct: 471 FGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNL 530
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK----ELIG 380
K G+ AL + G + SLV G + +++ +A+ E+IG
Sbjct: 531 KQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIG 582
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 7/246 (2%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGI-KPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N++L + ++K E VF E T + P ++ + + A ++M
Sbjct: 30 NSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKM 89
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
R + P S L+ F K K + V + + M G K V YN+ I + K
Sbjct: 90 KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDI 149
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A+ L +EM +G+ P++VTY+ I G+ K G ++ F+ M + P+ Y ++
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSL 209
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK G L F +E G PN + +LV + +A + +G
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269
Query: 382 VKEKFT 387
V +FT
Sbjct: 270 VPNEFT 275
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 37/269 (13%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A + A + F +M + ++ ++NAL+ AK+ + E K GI+PDL
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIQPDLL 379
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE----------EKY 232
Y I C +A ++ EM IK N + L+ ++K E+
Sbjct: 380 LYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439
Query: 233 EDV------------------NKVL--------QMMERYGMKSGVSMYNVRIHSLCKLRK 266
+++ NK++ +M +G++ ++Y I LCK +
Sbjct: 440 QELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQ 499
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A L ++M +G+ P+ Y+ + G K GN EA M+ G+ + Y +
Sbjct: 500 VKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTS 559
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPN 355
+V+ + + A F +E I + +P+
Sbjct: 560 LVWGFSQCNQLQKARSFLEEMIGEEILPD 588
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ N TE + +EM E +V F L+ L K + F +G++P
Sbjct: 424 FKSGNPTE-GLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQP 482
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ Y +I C+ + +A ++ +M ++ + P+ +++ +L+ G K+ + +
Sbjct: 483 NAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALR 542
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
M GMK + Y + + + +A++ L+EM+ + + P+ V
Sbjct: 543 DKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M+E+ ++ +N LL YK + I++ GI+ D+ TYN I C
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL-IDYMICKGIEADVCTYNVFIDNLC 1065
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S+ AY +L +M ++ I PN ++ L+ GF KE K +V M ++ +
Sbjct: 1066 TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 1125
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C + EA LLD M + G++ N VTY + G CK FE AK+ M
Sbjct: 1126 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 1185
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ + Y ++ +CK G + A+ G P+ T SL+ G +
Sbjct: 1186 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 1245
Query: 373 SEAKELI------GLVKEKFTKNVDTWNEIEAG 399
AKE+I GLV K + +N + G
Sbjct: 1246 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 1278
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I +Y + M ++AV TF+ + + SV N +L ++ K + V +F E G
Sbjct: 921 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-G 979
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P++ T+N +I C + A ++L +M+ P ++ L+ + K+ +Y+
Sbjct: 980 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ M G+++ V YNV I +LC + A+A LL +M + + PN VTY+ I GF
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K+G A + + MS LSPN Y ++ C GD+E AL A G N
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T +L+ GL K AK L+
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLL 1182
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+VF E K + + P+ TYN +I C D A +L M+ ++ N ++G L+ G
Sbjct: 1110 QVFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 1168
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K EK+E ++L+ M M G Y V I LCK EA L+ M G+ P+
Sbjct: 1169 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 1228
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TYS I GFC+ GN + AK+ M SGL N +Y T++Y C+ G+ A+
Sbjct: 1229 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 1288
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
G + T LV+ L K+ EA++ IGLV T
Sbjct: 1289 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 1336
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ F T G+ PD DTYN + + S + +L EM + P + + L+ G
Sbjct: 1637 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 1696
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ + K+ ME G S + + L K +A +LD ML + P
Sbjct: 1697 RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA 1756
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ ++ FC+D EA K +M GL + Y ++ MC GD A +E
Sbjct: 1757 TFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 1816
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ PN TT LV ++ A+ + + ++L+ ++E+
Sbjct: 1817 RHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R M+ LR + + LL L + ++ KR+ +E + + Y
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL-LERMRVNDMVVGHIAYTV 1199
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A ++ M + + P+ ++ +L+ GF + + +++ M R G
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ I++ C+ EA + M G + T + + C+DG EA+
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
KF MS GL PNS Y ++ GD A F + I G P+F T SL+ GL
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379
Query: 367 AGASKVSEAKELI 379
+ EAK+ +
Sbjct: 1380 CKGGNLVEAKKFL 1392
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY+ +I FC + SA I+ M R + N + L+ F + +
Sbjct: 1224 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 1283
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY------ 289
KV +M G + NV + SLC+ K EA+ L M G+ PNS+TY
Sbjct: 1284 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 1343
Query: 290 ------------------------SHFIYG-----FCKDGNFEEAKKFYRIMSNSGLSPN 320
S F YG CK GN EAKKF + + +
Sbjct: 1344 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVD 1403
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
S +Y T++ CK G+ A+ + + +P+ T SL+TGL K A L G
Sbjct: 1404 SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 1463
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S F L+ + KE + + +++ G K V N+ + S+ K ++ +L E
Sbjct: 915 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M KG+ PN T++ I G C +GN ++A + M +G P Y T++ + CK G
Sbjct: 975 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNE 395
Y+ A+ I KG + T + L + ++A L+ + KE + N T+N
Sbjct: 1035 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 1094
Query: 396 IEAG 399
+ G
Sbjct: 1095 LING 1098
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T N ++ + C A L M R + PN+ ++ ++ G+ + M
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 1360
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G Y + LCK EAK L+ + +SV Y+ + CK GN
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKS 361
EA + M + + P+S Y +++ +C+ G TA+ ++ +G + PN
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480
Query: 362 LVTGLAGA 369
LV GL+ A
Sbjct: 1481 LVDGLSKA 1488
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 2/226 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ PD TY+ ++ C + +A + M R ++ PN + LV G K +
Sbjct: 1435 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 1494
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M + G +N I S + + +A M G+ PN TY+ ++G
Sbjct: 1495 FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 1554
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K Y M G+ P+ + +++ + K G + + + I +G + +
Sbjct: 1555 FSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 1614
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
T L+ + + K+ +A +L+ + + DT+N I GL
Sbjct: 1615 QFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 36/286 (12%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+EM + AFNA++ + + + F + +G+ P+L TYN ++ F
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM-RWWGVCPNLATYNILLHGFS 1556
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE----------------------- 229
+ S+ + M R+ I P+ +F +L+ G K
Sbjct: 1557 KKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQF 1616
Query: 230 ------EKYEDVNK------VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
KY + K ++ M G+ YN + L K E+ +L EM
Sbjct: 1617 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 1676
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L G+ P Y I G C+ G+ + A K M G + MV + G
Sbjct: 1677 LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 1736
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
E A+ + +P T +L+ +K++EA +L G+++
Sbjct: 1737 EDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1782
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ + A +L M R + P ++F L+ F ++ K + K+ +ME G
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V YNV I +C A A L +EM + + PN TY+ + N + +
Sbjct: 1786 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1845
Query: 307 KFYRIMSNSGL 317
K + GL
Sbjct: 1846 KLLTDLQERGL 1856
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTY 184
TE A+ M +L ++ F L+ +D K + + ++ + G+K D+ Y
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRF--CRDAKIAEALKLKGVMELCGLKLDVVAY 1793
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C + DS++A+ + EM + + PN +++ LV K+L ++
Sbjct: 1794 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1853
Query: 245 YGMKS 249
G+ S
Sbjct: 1854 RGLIS 1858
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 1/272 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ K M+ ++H++ ++ L+ KD+ +F + K G
Sbjct: 488 INLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKD-G 546
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +I+AFC A ++ EM ++ +P + +F ++ GF + + +
Sbjct: 547 LKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 606
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
V MM R G V +N I L + R+ +A +LDEM G+ PN TY+ ++G+
Sbjct: 607 DVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGY 666
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + + GL + Y ++ CK G ++AL KE A+ N
Sbjct: 667 AALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 726
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
L+ G A V EA +L+ +K+ K
Sbjct: 727 FVYNILIDGWARRGDVWEAADLMQQMKQGGVK 758
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 129/302 (42%), Gaps = 1/302 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI + ++ + ++ +E K R N + + I Y Q + A +E
Sbjct: 377 VTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVRE 436
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+ + + ++ ++ T+ + ++ VF E K G P + +Y +I + +
Sbjct: 437 MEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVF-ERLKECGFAPSVVSYGCLINLYAKVG 495
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A + M+ IK N ++ L+ GF K + + + + + + + G+K V +YN
Sbjct: 496 KISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYN 555
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A ++ EM + +P S T+ I+GF + G + A + +M S
Sbjct: 556 NIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRS 615
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P + ++ + + E A+ E G PN T +++ G A +A
Sbjct: 616 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKA 675
Query: 376 KE 377
E
Sbjct: 676 FE 677
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 7/276 (2%)
Query: 106 DLQNERFHAHS----IILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
++Q ER S I++G A E A+ F M +V FNAL+L L +
Sbjct: 576 EMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKR 635
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
++ + E G+ P+ TY ++ + D+ A+ ++ + ++ + ++
Sbjct: 636 QMEKAIEILDEM-ALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTY 694
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
AL+ K + + V + M + +YN+ I + EA L+ +M
Sbjct: 695 EALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQ 754
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+KP+ TY+ FI CK G+ A K M SG+ PN Y T+++ + E
Sbjct: 755 GGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEK 814
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
AL +E G P+ L+T L + V+EA
Sbjct: 815 ALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEA 850
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY ++KA C+S SA ++ EM ++I N + L+ G+ + +
Sbjct: 686 GLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEA 745
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M++ G+K + Y I++ CK A +++EM + G+KPN TY+ I+G
Sbjct: 746 ADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHG 805
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA------LGFCKESIA 349
+ + E+A + ++ M +GL P+ +VY ++ + A L CKE I
Sbjct: 806 WARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIE 865
Query: 350 KGWVPNFTT 358
G + + T
Sbjct: 866 SGLIVDMGT 874
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 115 HSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+SII+ G A + + A R FKE + + + ++ A + + + + E
Sbjct: 379 YSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREM- 437
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ GI +D Y+ ++ + + ++ + P+ S+G L+ + K K
Sbjct: 438 EGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKI 497
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+V +MME G+K + Y++ I+ KL+ A A A+ ++++ G+KP+ V Y++
Sbjct: 498 SKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNI 557
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I FC G + A + M P S + +++ + G+ + AL G
Sbjct: 558 IRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGC 617
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
+P T +L+ GL ++ +A E++
Sbjct: 618 IPTVHTFNALILGLVEKRQMEKAIEIL 644
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 81/201 (40%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP Y ++ + D A M + I+P + + +L+ + E+
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M+ G++ + Y++ + K+ A E + N++ Y + IY +C
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYC 422
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ N ++A+ R M G+ +Y TM+ G+ E L + G+ P+
Sbjct: 423 QTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVV 482
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
+ L+ A K+S+A E+
Sbjct: 483 SYGCLINLYAKVGKISKALEV 503
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 76 LAFSIAINKLSEANYFN-GISQYLEELKTR---PDLQNERFHAHSIILYG--QANMTEHA 129
+ +S ++ L + + ++ L E+ R PD+ +S ++ G +A A
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT-----YSTVIDGLCKAGRLRDA 274
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V F+EM + +N+L+ A D E R+ + PD+ TY ++
Sbjct: 275 VDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDVITYTTLMS 330
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
AFC+ AY + +M + P+ +F +LV G E + ED ++L+ + R G
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ YN + CK + +A+ L+ + S+G PN+VTY+ + G C+ G ++A ++
Sbjct: 391 TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 450
Query: 310 -RIMSNSGLSPNS-SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
++ S G P S ++Y ++ +C+ G + A+ F +E I +G+VP T ++V L
Sbjct: 451 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 510
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
A + +A EL+ ++K T T + +
Sbjct: 511 KAHQPQQAHELLEEMIKYGHTPGPGTCDAV 540
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 13/323 (4%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEM-DE 138
I+ L +A + L ++K+R N H++++ G +A HA+ +++M D
Sbjct: 87 IHPLCKARLLDEAMGLLLDMKSRG--MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDA 144
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
H + L+ L+ A ++ +V E + PD T V+++ C
Sbjct: 145 HP--PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVD 201
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMMERYGMKSGVSMYNVR 257
A ++ EM + + NA ++ ALV G K E+ ++ V +L + R G + Y+
Sbjct: 202 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I LCK + +A + +EM P ++TY+ I G+C+ G+ +EA + M +
Sbjct: 262 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNC 318
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P+ Y T++ CK G + A ++ +A P+ T SLV GL G ++ +A E
Sbjct: 319 APDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 378
Query: 378 LI-GLVKEKFTKNVDTWNEIEAG 399
L+ + + + T+N + G
Sbjct: 379 LLEEITRRGCPPTIYTYNCVVDG 401
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 8/277 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A T A+ F +M E + +N L+ L A+ E + ++ K+ G+ P
Sbjct: 58 DARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDM-KSRGMNPGT 115
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+N VI C + A + +M+ + P+ ++ LV G K + D +VLQ
Sbjct: 116 LLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQE 174
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + V + SLC + +A+ L++EML +GM N++TYS + G CK
Sbjct: 175 MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 234
Query: 302 FEEAKKFYRI-MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA ++ G +P+ Y T++ +CK G A+ +E P T
Sbjct: 235 LDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE---MSCAPTAITYN 291
Query: 361 SLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
SL+ G A + EA L+G +V + +V T+ +
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F +L L + + + + ++ + G+ PD N ++ C++ D+++A ++ +M
Sbjct: 13 FAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKM 72
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
N +++ L+ K ++ +L M+ GM G ++NV I LC+ +
Sbjct: 73 AELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRL 131
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +M + P+ +TY+ ++G K G +A + + M ++ P+++ +
Sbjct: 132 RHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVV 190
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI--GLVKEK 385
V +C G + A +E + +G N T +LV GL ++ EA L+ + +
Sbjct: 191 VQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRG 250
Query: 386 FTKNVDTWNEIEAGL 400
FT ++ T++ + GL
Sbjct: 251 FTPDIVTYSTVIDGL 265
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVL--QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
++S+F ++ G + K + +L ++ +R G+ N + LC R A A
Sbjct: 9 DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDR-GLSPDPVELNTILAELCDARDTTTAMA 67
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L D+M G N TY + I+ CK +EA M + G++P + ++ ++ +C
Sbjct: 68 LFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC 126
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ G ALG ++ + P+F T LV GL+ A ++ +A +++
Sbjct: 127 RAGRLRHALGVYRQ-MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVL 172
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M + + + +N L+ L + RVF E + P+ TYN +I C
Sbjct: 68 LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEM-LMLNLSPNRVTYNILIDGHC 126
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A +L M+ K ++P+ ++GAL++G K K++ +++ + GM G
Sbjct: 127 DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYR 186
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I LCK E+ LLD M G P+ +T+S I GFCK G + AK+ M
Sbjct: 187 AYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKM 246
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+GL+PN +Y T++Y CK GD A G ++ L++ L A +V
Sbjct: 247 FKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRV 306
Query: 373 SEAKELI 379
+EA++ +
Sbjct: 307 AEAEDFM 313
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I+ ++ GI+ D+ TYN +I C+++ S+ Y +L +M ++ I PN ++ L+ G
Sbjct: 32 LIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLM 91
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KE K +V M + YN+ I C +A LLD M +KG++P+ V
Sbjct: 92 KERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEV 151
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y + G K F+ AK + SG+ Y M+ +CK G + +L
Sbjct: 152 NYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMM 211
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G P+ T L+ G A K+ AKE+I
Sbjct: 212 FKDGASPDIITFSVLINGFCKAGKIKNAKEVI 243
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 8/293 (2%)
Query: 101 LKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
+ TR + ++ HSIIL ++ M + + K+M N L+ T +
Sbjct: 561 IMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLI---TNSC 617
Query: 160 DYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ ++ + F + GI PD++TYN + +S ++ +L +M + I P ++
Sbjct: 618 ETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTST 677
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+ +L+ G + + ++ ME G+ S + + L + K EA +LD M
Sbjct: 678 QYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCM 737
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L K + P T++ ++ CK EA K M+ G+ + Y ++ +C GD
Sbjct: 738 LQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDA 797
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
A +E +G PN TT +L+ + ++ E +E + + E+F K V
Sbjct: 798 LAAFNLYEEMKERGLWPNTTTYCTLIDAI--STNEGEVEERLLVYLEQFEKLV 848
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ T++ +I FC++ +A ++ +M + + PN + L+ K+ +
Sbjct: 215 GASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEA 274
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY------ 289
+ M R G + NV I SLC+ + AEA+ + M + + PNS+T+
Sbjct: 275 FRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIING 334
Query: 290 ------------------------SHFIYG-----FCKDGNFEEAKKFYRIMSNSGLSPN 320
SHF YG CK GN EAKK + + + +
Sbjct: 335 YGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVD 394
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+++Y T++ CK G A+ E + +P+ T ++ GL+ K+ A
Sbjct: 395 TNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPA 449
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ P ++ ++ K+ +Y+ + ++ ME G+++ V YN+ I LCK +
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A+ LL +M + + PN TY+ I G K+ A + + M LSPN Y
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ C G++E AL AKG P+ +L++GL+ +K AK L+
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLM 173
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 160/385 (41%), Gaps = 61/385 (15%)
Query: 65 AALTPESH-LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQ 122
A +T H +D ++ I+ L A ++ + T DL II YG
Sbjct: 279 ATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMST-IDLAPNSITFDCIINGYG- 336
Query: 123 ANMTEHAVRTFKEMDEH-KLRHSVGAF--NALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ A++ F DE KL H F +LL L + +E K++ K + I
Sbjct: 337 --ILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLY---KLHHIPA 391
Query: 180 DLDT--YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK------ 231
+DT YN ++ C+ S A ++ EM + ++ P++ ++ ++AG ++ K
Sbjct: 392 AVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALL 451
Query: 232 -YEDV--------NKVL---------------------QMMERYGMKSGVSMYNVRIHSL 261
+E NKV+ + ME G+ N +
Sbjct: 452 FFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGY 511
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
++ K + + L +M S + P+ TY+ ++G+ K + + KFY IM+ G+SP+
Sbjct: 512 SRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDK 571
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA------ 375
+++ +CK G + K+ I + + + T+ L+T K+ +A
Sbjct: 572 LTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNI 631
Query: 376 KELIGLVKEKFTKNVDTWNEIEAGL 400
K L+G++ + V+T+N I GL
Sbjct: 632 KNLLGIIPD-----VNTYNAIFTGL 651
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 7/316 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+ A+ + + +G ++E+ N + I + Q + AVR KEM
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E + +N+L++ L+ AK E + +E + G KPD TY I + E+ +
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN-GFKPDAFTYGAFISGYIEAGEF 541
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+SA + EM + PN L+ + K+ K + + M G+ Y V
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
++ L K K +A+ + EM KG+ P+ +Y I GF K GN ++A + M +GL
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+ N +Y ++ C+ G+ E A E KG+ PN T +++ G + ++EA +
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721
Query: 378 LI------GLVKEKFT 387
L GLV + F
Sbjct: 722 LFDEMKLKGLVPDSFV 737
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 3/306 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +A+SI I+ L + + + + E+ + + + + I + + E A F
Sbjct: 314 DNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALF 373
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-TYGIKPDLDTYNRVIKAFC 192
M + A+ +L+ K+ ++ + +E K I P TY +K C
Sbjct: 374 DGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY--TYGTAVKGMC 431
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S D AY+I+ EM +PN + L+ F ++ ++ D +VL+ M G+
Sbjct: 432 SSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF 491
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I L K +K EA++ L EM+ G KP++ TY FI G+ + G F A K+ + M
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ PN + ++ CK G A + + +G + + T L+ GL KV
Sbjct: 552 LECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKV 611
Query: 373 SEAKEL 378
++A+E+
Sbjct: 612 NDAEEI 617
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI D TY ++ ++ + A I EM K I P+ S+G L+ GF K +
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M + G+ S V +YN+ + C+ + +AK LLDEM KG PN+VTY I G
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDG 709
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+CK G+ EA + + M GL P+S VY T+V C+ D E A+
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 755
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 140/339 (41%), Gaps = 11/339 (3%)
Query: 57 KILEICRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHA 114
K++E C A E + D +++ +N L + N + E++ + + +
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I + + + A F EM + L +V +N LL + + ++ K + E
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G P+ TY +I +C+S D + A+ + EM K + P++ + LV G + E
Sbjct: 695 -GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA----KALLDEMLSKGMKPNSVTYS 290
+ + E+ G S + +N I+ + K K L+D K KPN VTY+
Sbjct: 754 AITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYN 812
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I CK+GN E AK+ + M + L P Y +++ K G E IA
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
G P+ ++ ++A + L+ + F KN
Sbjct: 873 GIEPDNIMYSVIINAFLKEGMTTKA---LVLLDQMFAKN 908
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P +YN +I C+ A S+L EM+ + + ++ L+ G K +
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N ++ M +G MY+ I + K +AKAL D M++ G+ P + Y+ I G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 296 F-----------------------------------CKDGNFEEAKKFYRIMSNSGLSPN 320
F C G+ + A + M SG PN
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LI 379
+Y T++ + + A+ KE +G P+ SL+ GL+ A K+ EA+ L+
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514
Query: 380 GLVKEKFTKNVDTWNE-----IEAG 399
+V+ F + T+ IEAG
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAG 539
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 108/280 (38%), Gaps = 57/280 (20%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAE---------------------MDRKSIKPNASS 218
D+ +Y +I A C + A +L + M K + P+ S
Sbjct: 223 DVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQS 282
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ L+ G K+++ ED +L M G+ + Y++ I L K R A L+ EM+
Sbjct: 283 YNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMV 342
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV--YF------ 330
S G + + Y +FI K+G E+AK + M G++P + Y +++ +F
Sbjct: 343 SHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVR 402
Query: 331 ---------------------------MCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
MC GD + A KE A G PN +L+
Sbjct: 403 KGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLI 462
Query: 364 TGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
S+ +A ++ ++E+ + +N + GL +
Sbjct: 463 KTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 19/250 (7%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL--- 152
Q +E+K + + + + + + N E A+ F E +E S FNAL+
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWV 779
Query: 153 -----LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
LT + + F +F K P+ TYN +I C+ + +A + M
Sbjct: 780 FKFGKTELTTDMINRLMDGSFDKFGK-----PNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ ++ P ++ +L+ G+ K + ++ V + G++ MY+V I++ K
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894
Query: 268 AEAKALLDEMLSK-----GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+A LLD+M +K G K + T + GF K G E A+K M P+SS
Sbjct: 895 TKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSS 954
Query: 323 VYFTMVYFMC 332
++ C
Sbjct: 955 TVIELINESC 964
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+ +++++ G Q + AV ++E+ + L + F L+ AK + E K +F+E
Sbjct: 257 YTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLE 316
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
P+ +G+ P + YN ++ S ++ A ++ EM R + P+ + +V G
Sbjct: 317 MPR-FGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGG 375
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ LQ ++ G+ + YN I C++ EA A M G++PN V+YS
Sbjct: 376 QMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYS 435
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G K G + A Y M G+ PN Y +++ K G + A KE I
Sbjct: 436 SLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIEN 495
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G PN T+ LV GL ++V EA +
Sbjct: 496 GISPNAITVSVLVDGLCRENRVQEAVRFV 524
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + +M ++ +V + ++ AL + +R+F + K G++P+ TYN ++
Sbjct: 205 AQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF-DAMKEAGMQPNQYTYNVLM 263
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ D +SA + E+ + + PNA F L+ GF K +++ + + M R+G+
Sbjct: 264 SGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVA 323
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +YN + + EA AL EM G+ P+ T S + G C G A +F
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + G++ N++ Y ++ C+ G+ E AL C G PN + SL+ G +
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSK 443
Query: 369 ASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
K+ A + +V + NV T+ + G
Sbjct: 444 RGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 475
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+I Q + + A+ F+ + + ++ A NA+L L A+ +F E + G
Sbjct: 126 VIALSQMGLLDEALYVFRRL---RTLPALPACNAVLDGLVKARRPGCAWELFDEMLRR-G 181
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P + TYN +I A + A + +M + I PN ++ ++ +E D
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE 241
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ GM+ YNV + C+ A L E+L G+ PN+V ++ I GF
Sbjct: 242 RLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGF 301
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK F EAK + M G++P VY +++ + G+ + AL +E G P+
Sbjct: 302 CKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDE 361
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
T +V GL ++ A + V+E
Sbjct: 362 FTCSIVVRGLCDGGQMHVADRFLQGVQE 389
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 143/353 (40%), Gaps = 49/353 (13%)
Query: 24 TSSILSSGDKTPLTSKDKTRAALTL----LKSESNPEKIL------EICRAAALTPES-- 71
T ++L SG +D +A+ L LKS NP ++ C+A +
Sbjct: 258 TYNVLMSGH----CQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGM 313
Query: 72 HLDRLAFSIA-----INKLSEANYFNGISQ---YLEELKTRPDLQNERFHAHSIILYGQA 123
L+ F +A N L + + +G +Q L + TR L + F SI++ G
Sbjct: 314 FLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTC-SIVVRGLC 372
Query: 124 NMTEHAV--RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ + V R + + E + + A+NAL+ + +E + GI+P++
Sbjct: 373 DGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEV-GIEPNV 431
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y+ +I + A +I EM K I+PN ++ AL+ G K + ++ +
Sbjct: 432 VSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKE 491
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK------------------ 283
M G+ +V + LC+ + EA + E G+K
Sbjct: 492 MIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEY--SGLKCSDIHSVFSNFTIEEECL 549
Query: 284 -PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
PNSV Y IYG DG EA K + M SG+ P+S Y ++ C G
Sbjct: 550 IPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLG 602
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 26/267 (9%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVR 131
D SI + L + + ++L+ ++ D N A++ ++ Y + E A+
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQE--DGVNLNAAAYNALIDEYCRIGNLEEALA 417
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
T M E + +V ++++L+ + + ++ E GI+P++ TY +I
Sbjct: 418 TCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEM-VAKGIEPNVVTYTALIHGH 476
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG- 250
++ +A+ + EM I PNA + LV G +E + ++ + + ME G+K
Sbjct: 477 AKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFV--MEYSGLKCSD 534
Query: 251 ------------------VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+Y I+ L + EA L M GM P+S TY+
Sbjct: 535 IHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLL 594
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSP 319
I G C G A Y M G+ P
Sbjct: 595 IRGQCMLGYVLNAMMLYADMMKIGVKP 621
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ + A + FKEM L + AL+ L A + V+ + + G PD
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY-KTMTSQGCVPD 173
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ T + +I C++ +A I M+ + + PN + AL+ G K K + ++L
Sbjct: 174 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 233
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M++ YN+ I LCK A A+A DEML G KP+ TY+ I GFCK G
Sbjct: 234 QMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 293
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
N + A + MS+S SPN Y T++ +CK A + + +G P+
Sbjct: 294 NTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYS 353
Query: 361 SLVTGLAGASKV 372
SLV GL + K+
Sbjct: 354 SLVDGLCKSGKL 365
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ +++ ++ V + +L+ L K E ++F E + G+ D Y
Sbjct: 86 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMA-SRGLALDTVCYTA 144
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ A S+ M + P+ + ++ G K + ++ + ME G
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 204
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ IH LCK RK A +L +M P+++TY+ I G CK G+ A+
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAAR 264
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
F+ M +G P+ Y ++ CK G+ + A G + + PN T +L++GL
Sbjct: 265 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGL 324
Query: 367 AGASKVSEA 375
++++A
Sbjct: 325 CKRRQLTKA 333
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T G D+ TY ++ ++ A +++ ++ P +++ AL+ G K + E
Sbjct: 27 TNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 86
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ +L+ + G V Y I L K ++ EA L EM S+G+ ++V Y+ I
Sbjct: 87 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALI 146
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G + G +A Y+ M++ G P+ TM+ +CK G A+ K A+G
Sbjct: 147 RGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA 206
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF-TKNVDTWNEIEAGL 400
PN +L+ GL A K+ A E++ +K+ F T + T+N + GL
Sbjct: 207 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 254
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + TYN ++ C+ A +L ++ P+ ++ +L+ G K+++ +
Sbjct: 64 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEA 123
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ + M G+ Y I L + K +A ++ M S+G P+ VT S I G
Sbjct: 124 YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G A + ++ M GL+PN VY +++ +CK + AL + P+
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
T L+ GL + V+ A+ + E K +V T+N + +G
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISG 288
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T++ +I ++ A+S+ E + ++ +V K +K ++ +++ +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G ++ YN ++ LCK+ + EA LL +++ G P+ VTY+ I G K
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EA K ++ M++ GL+ ++ Y ++ + + G A K ++G VP+ T+ ++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 363 VTGLAGASKVSEA 375
+ GL A ++ A
Sbjct: 181 IDGLCKAGRIGAA 193
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+F L+ G K + + Q G + Y + L K +K EA AL++++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G P TY+ + G CK G EEA R + ++G +P+ Y +++ + K
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A KE ++G + +L+ GL A K+ +A +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSV 161
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K + ++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K+ I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 139/287 (48%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I +G + + R F+EM E ++ + + ++ + K +F E + G
Sbjct: 8 IDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEK-G 66
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ ++ TY +I C++ + +A ++ EM + + N + L+ G+ K ++
Sbjct: 67 LVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAF 126
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
KV +ME+ G ++ + N L KL + EAK L M+ KG+ PN V+Y+ I +
Sbjct: 127 KVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIY 186
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+GNF EAKK ++ M +G PN+ Y ++ K G + A E AKG P+
Sbjct: 187 CKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDI 246
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T SL+ G K+ +A EL V++K NV T+ I +GL +
Sbjct: 247 YTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSK 293
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 112 FHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
H +++++ + T+ A F E+ E L +V + AL+ + A + E + +
Sbjct: 36 IHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEM-EAAEILV 94
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
+T G+ + YN +I +C+ A+ + M++K + + + + G K
Sbjct: 95 NEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKL 154
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
+ E+ + L M G+ V Y I CK EAK L EM G +PN+VTY
Sbjct: 155 NQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTY 214
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ I G K G +EA + M G+ P+ Y ++++ C G + A+ E
Sbjct: 215 NVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQ 274
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
KG N T ++++GL+ + EA +L
Sbjct: 275 KGLPLNVVTYTAIISGLSKEGRSEEAFKL 303
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+ I+ + +A + E++TR N+ + I Y + + + A + M+
Sbjct: 74 YGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIME 133
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + + N + L +E KR + + G+ P++ +Y +I +C+ +
Sbjct: 134 KKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEK-GVVPNVVSYTTLIDIYCKEGNF 192
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A + EM + +PNA ++ L+ G K+ + ++ ++ M G+ + Y
Sbjct: 193 VEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSL 252
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+H C K +A L +E+ KG+ N VTY+ I G K+G EEA K Y M+ +GL
Sbjct: 253 LHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGL 312
Query: 318 SPNSSVYFTMV 328
+P+ VY ++V
Sbjct: 313 TPDDRVYTSLV 323
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N E A + F+EM + + +N L+ + KE + E + GI PD+
Sbjct: 189 EGNFVE-AKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEM-RAKGIFPDI 246
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY ++ C A + E+ +K + N ++ A+++G KE + E+ K+
Sbjct: 247 YTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDE 306
Query: 242 MERYGMKSGVSMYNVRIHSLCK 263
M G+ +Y + SL K
Sbjct: 307 MTEAGLTPDDRVYTSLVSSLHK 328
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ TYN ++ C+ +A +++AE ++ P+ ++ L+A ++ + ++
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEA 136
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
M G + +N I LC+ R+ A+A + +EM+ + PN VTYS I G
Sbjct: 137 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 196
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK +EA++ M + G P+ Y +V G ++ALG + +++G +P+
Sbjct: 197 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 256
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T ++ L +V +A E+ LV K + NV T++ + G
Sbjct: 257 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGG 301
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+NAL+ L +D + R I + PD+ TYN ++ A + A + +M
Sbjct: 85 YNALVDGLC-KQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P SF A++ G + + D +V M + Y+V I LCK +
Sbjct: 144 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 203
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ LLD M+S+G +P+ V Y+ + GF G + A R M + G P+ Y +
Sbjct: 204 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 263
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ +CK G + A +E +A PN T +L+ G AS+V E +++ +E
Sbjct: 264 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM---REMAC 320
Query: 388 K-NVDTWNEIEAGL 400
+ NV T+N + GL
Sbjct: 321 RPNVVTYNTMIWGL 334
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + A+ TF +M E ++ +FNA++ L A+ + VF E P+L
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR-DFHPNL 187
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ VI C+S A +L M + +P+ ++ LV GF + + +L+
Sbjct: 188 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 247
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V Y V I LCK+ + +A + E+++ PN VTYS I G+C+
Sbjct: 248 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 307
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+E K R M+ PN Y TM++ + E A G +E G+VP+ T +
Sbjct: 308 VDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRG 364
Query: 362 L 362
L
Sbjct: 365 L 365
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSIL-AEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++ + T + +++ C + A A ++ +P+ S+ L+ G K + +
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 235 VNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + M+ G + YN + LCK + A+A++ E + P+ VTY+ +
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+ G +EA + M+ G P + ++ +C+ AL E I + +
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
PN T ++ GL + ++ EA++L+
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLL 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEA-KKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M +GM+ N T S + G C+ G +A + F + + P+ Y T++ +CK G
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 336 DYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTW 393
+ A ++ +A G PN T +LV GL ++ A+ +I +++ F +V T+
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 394 NEIEAGLPQ 402
N + A L Q
Sbjct: 121 NTLMAALFQ 129
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 19/311 (6%)
Query: 85 LSEANYFNGISQYLEEL-KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
LS+ F + +EE+ K P L + + A+M + A+ EM +
Sbjct: 150 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 209
Query: 144 SVGAFNALLLALT----------IAKDYK-------EVKRVFIEFPKTYGIKPDLDTYNR 186
F LL AL + +D + E K V ++ + G +PD+ Y
Sbjct: 210 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRVGKMMEAKYVLVQMNEA-GFEPDIVDYTN 268
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ + + + AY +L +M R+ +PNA+ + L+ K ++ E+ KV MERY
Sbjct: 269 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 328
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V Y + CK K + +LD+M+ KG+ P+ +TY H + K +FEE
Sbjct: 329 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 388
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M P+ +Y ++ CK G+ + A+ E G P T ++ GL
Sbjct: 389 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 448
Query: 367 AGASKVSEAKE 377
A + EA +
Sbjct: 449 ASQGCLLEASD 459
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 30/310 (9%)
Query: 80 IAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEH 139
+ + K+ EA Y + + E PD+ + + + + Y A A ++M
Sbjct: 239 MRVGKMMEAKY---VLVQMNEAGFEPDIVD---YTNLLSGYANAGKMADAYDLLRDMRRR 292
Query: 140 KLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
+ + L+ AL +E +VF+E + Y + D+ TY ++ FC+
Sbjct: 293 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER-YECEADVVTYTALVSGFCKWGKIDK 351
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
Y +L +M +K + P+ ++ ++ K+E +E+ ++++ M + + +YNV I
Sbjct: 352 CYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIR 411
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC---------------------- 297
CKL + EA L +EM G+ P T+ I G
Sbjct: 412 LACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLLLNTVL 471
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTM-VYFMCKGGDYETALGFCKESIAKGWVPNF 356
KD E AK + +++ G + + +T+ ++ + G + A +C E I ++P
Sbjct: 472 KDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQP 531
Query: 357 TTMKSLVTGL 366
T L+ GL
Sbjct: 532 DTFAKLMKGL 541
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 6/271 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--FIEFPKTYGIKPDLDTYNRVIKA 190
F E+ + LR + +FN L+ L +++ E R+ +E + Y PD+ TY+ +I
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY---PDVFTYSVLIHG 302
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A + EM ++ ++PN +F AL+ G + + + M G+K
Sbjct: 303 LCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPD 362
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ MYN ++ LCK+ +A+ L+DEM GMKP+ +TY+ I G+CK+G+ E A + +
Sbjct: 363 LVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M+ G+ ++ + ++ C+ G A +E + G P+ T ++ G
Sbjct: 423 GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
V +L+ ++ K V T+N + GL
Sbjct: 483 NVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 147/326 (45%), Gaps = 14/326 (4%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIIL 119
R L P + ++F+ IN L ++ + + + +EE + PD+ H +
Sbjct: 250 RKRGLRPTT----VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
G+ ++ E + F EM + LR + F AL+ ++ + + T G+KP
Sbjct: 306 EGRLDVAE---QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM-LTMGVKP 361
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL YN ++ C+ D + A ++ EM +KP+ ++ L+ G+ KE E ++
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G+ + I C+ + +A+ L EM+ GMKP+ TY+ I G+CK
Sbjct: 422 KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
GN + K + M +G P Y ++ +CK G + A + + G P+ T
Sbjct: 482 GNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITY 541
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
L L G K +A++L+ L EK
Sbjct: 542 NIL---LEGHCKNGKAEDLLKLRNEK 564
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG P + YN +I FC+ A I E+ ++ ++P SF L+ G K ++
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + ME + V Y+V IH LCK + A+ L DEM +G++PN +T++ I
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C+ + A Y M G+ P+ +Y T++ +CK GD A E G P
Sbjct: 337 GQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396
Query: 355 NFTTMKSLVTGLAGASKVSEAKEL 378
+ T +L+ G + A E+
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEI 420
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%)
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S+ + ++ +E+ P + L+ F KE D + + + G++
Sbjct: 201 SNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVS 260
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N I+ LCK R E L M + P+ TYS I+G CK+G + A++ + M
Sbjct: 261 FNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL PN + ++ C+ ++A+ + + G P+ +L+ GL V+
Sbjct: 321 QRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380
Query: 374 EAKELI 379
+A++L+
Sbjct: 381 KARKLV 386
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
E+L G P Y+ I FCK+G+ +AK + + GL P + + T++ +CK
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + K P+ T L+ GL ++ A++L ++++
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD Y +I ++ A+S+ M + + +A ++ L+ GF + ++ +
Sbjct: 348 GNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEA 407
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L M+ G++ V YN + LCK LL +M+ G +P+ VT+ I+G
Sbjct: 408 YELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHG 467
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G +EA + +R M SG+ PN+ +Y T++ F+CK D A+ E K N
Sbjct: 468 YCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPAN 527
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKE 384
TT +L+ GL + +A EL+ L++E
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDLMRE 556
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 162/390 (41%), Gaps = 34/390 (8%)
Query: 22 LATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIA 81
+ T IL G L + AL++L S PE ++C D + +
Sbjct: 172 VVTYGILVKG----LCKAGRVGDALSVLDGMSGPES--DVCP----------DVVMLNNI 215
Query: 82 INKLSEANYFNGISQYLEELKTR------PDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++ L + +++EE + R P+ AH+ G M A +
Sbjct: 216 VDGLCKTGRLQQAVKFVEE-RMRSVHGCAPNTVTYNCLAHAFCRAGNVGM---ACELVAK 271
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE----FPKTYGIKPDLDTYNRVIKAF 191
M++ ++ + N ++ L F E +P+ G + TY+ ++ AF
Sbjct: 272 MEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARG---NAVTYSTLVGAF 328
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
+++ A + EM + P+A + +++G + + +D + M++ G +
Sbjct: 329 LHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDA 388
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN+ I C+ ++ EA LL EM G++P+ TY+ + G CK G+F +
Sbjct: 389 KAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGK 448
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G P+ + T+++ CK G + AL + G PN +L+ L +
Sbjct: 449 MIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRD 508
Query: 372 VSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
S A EL ++EK NV T+N + GL
Sbjct: 509 TSLAIELFDEMREKHVPANVTTFNALLKGL 538
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 148/370 (40%), Gaps = 53/370 (14%)
Query: 51 SESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDL 107
S ++ + L AA P D AF+ ++ L++A G++Q ++ RP++
Sbjct: 116 SSADAARFLRDSLAAGAPPP---DTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNV 172
Query: 108 QNERFHAHSIILYG--QANMTEHAVRTFKEMD--EHKLRHSVGAFNALLLALT-IAKDYK 162
+ I++ G +A A+ M E + V N ++ L + +
Sbjct: 173 VT-----YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQ 227
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
VK V +G P+ TYN + AFC + + A ++A+M+++ + PNA + +
Sbjct: 228 AVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTI 287
Query: 223 VAG------------FYKEEK-------------------YEDVNKVLQMMERY------ 245
V G F++E++ + N V ME +
Sbjct: 288 VGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDE 347
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G MY I L + + +A ++ M G + ++ Y+ I GFC+ EA
Sbjct: 348 GNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEA 407
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M +GL P+ Y T++ +CK GD+ + I G P+ T +L+ G
Sbjct: 408 YELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHG 467
Query: 366 LAGASKVSEA 375
++ EA
Sbjct: 468 YCKVGQIDEA 477
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 6/264 (2%)
Query: 69 PESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEH 128
PE+ + + +S + N + E+ + + + I QA +
Sbjct: 312 PEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDD 371
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A M + + A+N L+ K E + E K G++PD+ TYN ++
Sbjct: 372 AWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM-KEAGLQPDVYTYNTLL 430
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ D + +L +M +P+ +FG L+ G+ K + ++ ++ + M+ G++
Sbjct: 431 SGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQ 490
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF-EEAKK 307
+YN I LCK R + A L DEM K + N T++ + G +D N E+A +
Sbjct: 491 PNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGL-RDKNMPEKAFE 549
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFM 331
+M +P+ Y T+ M
Sbjct: 550 LMDLMREGRCTPD---YVTIDILM 570
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
SS + +A + + + P+ S+F L+ + + ++ M ++ V
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVT 174
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSK--GMKPNSVTYSHFIYGFCKDGNFEEAKKFY-- 309
Y + + LCK + +A ++LD M + P+ V ++ + G CK G ++A KF
Sbjct: 175 YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE 234
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
R+ S G +PN+ Y + + C+ G+ A + + PN T+ ++V GL
Sbjct: 235 RMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWV 294
Query: 370 SKVSEAKELIGLVKEKFTKNVDTWNE 395
+V A E +EK T W E
Sbjct: 295 GRVGAALEFF---REKRT----VWPE 313
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ + EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +FC+ + A S+ + + ++P+ SF L+ G+ K +
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQ 358
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 ---------VKEKFTKNVDTWN 394
+ +F K D W
Sbjct: 378 KLEIGTYTMIINEFCKKGDVWT 399
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I G CK+G+ E A ++
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+IM + + Y ++ +C+ G A +E ++ G
Sbjct: 334 RKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ ++M + ++ Y I LC+ + +A+ +L EMLS G+K TY+ I F
Sbjct: 332 EYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLMKEMQRDGYVPS 415
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A+ + P+ + +S+ IN L + + + ++ +E+ + N I + +
Sbjct: 198 QASGVQPDVY----TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ A+ +K+M L + +N L+ L D K+ + + E G+KPD
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDKI 312
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I C+ D +A+ M +++I+ + ++ AL++G +E + D K+L+ M
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
G+K + Y + I+ CK L+ EM G P+ VT
Sbjct: 373 LSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 86/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E R + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILET-RGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ FCK+G A+ + ++ GL P+ + T++ K GD
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 7/245 (2%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V + +L+ L + E R+FI K G P++ TY +IK C + + + A +
Sbjct: 161 VVTYTSLIKGLCMEHRISEATRLFIRMQK-LGCWPNVVTYGTLIKGLCRTGNINLALKLH 219
Query: 205 AEMDRKS------IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
EM + KPN S+ ++ K K+++ ++ M G++ V ++ I
Sbjct: 220 QEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALI 279
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+LCK EAK L+ M+ +G+ P+ T++ I GFC G+ + AK+ + M + G
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y ++Y CK + E A+ E + G P+ T L+ GL A KV +AK+L
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399
Query: 379 IGLVK 383
G+VK
Sbjct: 400 FGVVK 404
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 134/303 (44%), Gaps = 21/303 (6%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKL 141
++S AN+ + L L R LQ H + ++ + N+T F ++ +
Sbjct: 40 QISSANH----PKSLHALSERISLQ----HGLPMFIHNCKKGNITSTQALQFFDL----M 87
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
S+ +FN LL AL K Y +V ++ + G+ P+ T N +I C +
Sbjct: 88 MRSIISFNLLLGALAKIKHYSQVFSLYKKM-HLAGLSPNFFTLNILINCLCNVNRVREGL 146
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S +A + R+ P+ ++ +L+ G E + + ++ M++ G V Y I L
Sbjct: 147 SAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGL 206
Query: 262 CKLRKCAEAKALLDEMLSK------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
C+ A L EML+ KPN +Y+ I CK G ++EAK+ + M +
Sbjct: 207 CRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQ 266
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ P+ + ++ +CK G A F + + +G VP+ T SL+ G + A
Sbjct: 267 GVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSA 326
Query: 376 KEL 378
KEL
Sbjct: 327 KEL 329
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
F +L+ + D K +F+ P + G +PD+ +Y +I +C++ + A + E
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMP-SKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 367
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M R P+ +F L+ G + K D K+ +++ + + + + +V + LCK
Sbjct: 368 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 427
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L +E+ S MK + +++ I G CK E A + + +S GL P+ Y
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
M+ CK G + A + G PN T +L+ G +K+ E +L+
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 540
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 7/310 (2%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
NG S Y + +P++ + + G+ + A R F EM + +R V F+A
Sbjct: 223 LNGTSPY--AINCKPNIFSYNIIIDELCKIGKW---KEAKRLFNEMVDQGVRPDVVTFSA 277
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L+ L E K+ F+E GI PDL T+ +I+ FC D SA + M K
Sbjct: 278 LIDTLCKEGMVIEAKK-FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSK 336
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+P+ S+ L+ G+ K E+ K+ M R G + + V + L K +A
Sbjct: 337 GYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDA 396
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
K L + + N S F+ G CK+G EA + + + + + + + ++
Sbjct: 397 KKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDG 456
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKN 389
+CK ETA ++ +G P+ T ++ G +V A L +++E T N
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516
Query: 390 VDTWNEIEAG 399
+ T++ + G
Sbjct: 517 LLTYSALLHG 526
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++++++YG E A++ + EM + F LL L +A + K++F
Sbjct: 344 SYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF-GV 402
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K + + +L + + C++ A + E+ ++K + SF L+ G K K
Sbjct: 403 VKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARK 462
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E ++ + + + G++ V Y + I+ CK + A L M G PN +TYS
Sbjct: 463 LETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSA 522
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
++GF K+ EE K M +S +S+Y
Sbjct: 523 LLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIY 555
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F E+ + ++ + +FN L+ L A+ + +F + + G++PD+ TY +I
Sbjct: 431 AMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQE-GLQPDVVTYCIMI 489
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ +A + M+ PN ++ AL+ GFYK K E+V K+L M + +
Sbjct: 490 NGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVS 549
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLD 275
S+Y + + K KC E +L
Sbjct: 550 LAASIYTIVEDMVSKDEKCREWLDILQ 576
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 63/118 (53%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K+Y +K D++++N +I C++ +A+ + ++ ++ ++P+ ++ ++ GF K +
Sbjct: 439 KSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQV 498
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++ N + QMME G + Y+ +H K K E LL +M+ K + + Y+
Sbjct: 499 DNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 17/334 (5%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG--QANM 125
H D + ++ I ++ + L E+ R PD+ +S ++ G +A
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT-----YSTVIDGLCKAGR 229
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
AV F+EM + +N+L+ A D E R+ + PD+ TY
Sbjct: 230 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK-CAPDVVTYT 285
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ AFC+ AY + +M + P+ +F +LV G E + ED ++L+ + R
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + YN + CK + +A+ L+ + S+G PN+VTY+ + G C+ G ++A
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405
Query: 306 KKFY-RIMSNSGLSPNS-SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
++ ++ S G P S ++Y ++ +C+ G + A+ F +E I +G+VP T ++V
Sbjct: 406 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 465
Query: 364 TGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
L A + +A EL+ ++K T T + +
Sbjct: 466 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 499
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 17/333 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D L ++ ++ LS+A Q L+E+ + PD S+ L + + A
Sbjct: 38 DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCL---GDRVDDAR 94
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+EM + + ++AL+ L + E +E G P + TYN +I
Sbjct: 95 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV-ALVETMAERGCAPTVVTYNSIITG 153
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM---ERYGM 247
FC + A+ + +M + P+ ++ AL+ GF K DV + L+++ R G
Sbjct: 154 FCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSR---DVGRGLELLGEVTRRGF 210
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y+ I LCK + +A + +EM P ++TY+ I G+C+ G+ +EA +
Sbjct: 211 TPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIR 267
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M + +P+ Y T++ CK G + A ++ +A P+ T SLV GL
Sbjct: 268 LLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLC 327
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
G ++ +A EL+ + + + T+N + G
Sbjct: 328 GEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 10/286 (3%)
Query: 115 HSIILYG--QANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
H++++ G +A HA+ +++M D H + L+ L+ A+ ++ +V E
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQMNDAHP--PDFLTYTKLVHGLSKARRLRDAVQVLQEM 65
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ PD T V+++ C A ++ EM + + NA ++ ALV G K E+
Sbjct: 66 VSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ +++ M G V YN I C+ R+ EA +++M+++G P+ +TY+
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GFCK + + ++ G +P+ Y T++ +CK G A+ +E
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE---MS 241
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
P T SL+ G A + EA L+G +V +K +V T+ +
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTL 287
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
M P ++ ++ I G C+ G A YR M N P+ Y +V+ + K A+
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E ++ VP+ TT+ +V L +V +A+EL+ ++ N T++ + GL
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 170/420 (40%), Gaps = 39/420 (9%)
Query: 15 SQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLL---KSESNPEKILEICRAAALTPES 71
SQ++H + S + P S + R + L KS +P+ L +
Sbjct: 60 SQQYHTFRPRRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLFNQYQQMGFK 119
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D ++S + KL+ + F + L+ L+ E I YG++ M E AV
Sbjct: 120 H-DYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAVE 178
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI---------------------- 169
F+ M ++ +FN LL L + + +F
Sbjct: 179 LFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWL 238
Query: 170 ---EFPKTYGI---------KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E+ K + + KP + T+N +I C D A +L +M +K +PNA
Sbjct: 239 GKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAV 298
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G KY++ K++ M+ G K + + V + L + + ++K LL EM
Sbjct: 299 TYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEM 358
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ KP+ VTY+ I CK+G EA K M G PN++ Y MV C+ D+
Sbjct: 359 KRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDF 418
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
E L + G P + LV GL K+ A ++ + K K +++ W +
Sbjct: 419 EGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEAL 478
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + + V +N L+ L E +V +E + G +P+ TY ++ FC+
Sbjct: 357 EMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEM-QVGGCEPNAATYRMMVDGFCQV 415
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D +L+ M P SF LV G K K + VL+ ME+ M+ + +
Sbjct: 416 EDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAW 475
Query: 255 NVRIHSLC 262
+ C
Sbjct: 476 EALVKDAC 483
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P++ YN +I + C+ + A+ + +EM + I P+ ++ AL++GF+ K +D
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M +K V +N+ + CK K E K + M+ +G+KPN VTY + G+
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C +A + M+ G++P++ Y M+ CK + A+ K+ K +PN
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T SL+ GL + K+S A +L+
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLV 376
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
GQA A++ + +D ++ +V +N ++ ++ K E ++ E + GI PD
Sbjct: 157 GQA---RAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV-SEGISPD 212
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY+ +I F A + +M ++IKP+ +F LV GF K+ K ++ V
Sbjct: 213 VVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFA 272
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
MM + G+K V Y + C +++ +A ++ + M G+ P++ +Y+ I GFCK
Sbjct: 273 MMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIK 332
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA ++ M + PN Y +++ +CK G AL E +G P+ T
Sbjct: 333 KVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYS 392
Query: 361 SLVTGLAGASKVSEAKELIGLVKEK 385
S++ L +V +A L+ +K++
Sbjct: 393 SILDALCKNHQVDKAIALLTKLKDQ 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F M + ++ +V + +L+ + K + +F + G+ PD +YN +I F
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG-GVNPDTQSYNIMINGF 328
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A ++ +M K+I PN ++ +L+ G K K K++ M G+ +
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388
Query: 252 SMYNVRIHSLCKLRKCAEAKALL--------DEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
Y+ + +LCK + +A ALL +++ KG + Y+ I GFC G F
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
EA M ++G P++ Y ++ + K + + A +E IA+G +
Sbjct: 449 EALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 14/207 (6%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
+ +K+ P FG ++ K Y + + ME G+ S + N+ I+ +L +
Sbjct: 51 LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110
Query: 267 CAEAKALLDEMLSKGMKPNSVT-------------YSHFIYGFCKDGNFEEAKKFYRIMS 313
+ ++ +L KG PN +T Y I G CK G A + R +
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ PN +Y T++ MCK A E +++G P+ T +L++G K+
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAG 399
+A +L ++ E +V T+N + G
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDG 257
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N + AV MD +V +N ++ L +D VF K GI+
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRA 217
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN +I S + A +L +M ++ I PN F AL+ F KE + +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + V YN I+ C +AK + D M+SKG P+ VTY+ I GFCK
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K + M+ GL ++ Y T+++ C+ G A + G P+ T
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ L K+ +A ++ L K + ++ T+N I GL
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 13/367 (3%)
Query: 39 KDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
K R LL+ +NPE L + A + +RL N+L + + S +
Sbjct: 14 KGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR-----NELHCIKFDDAFSLFC 68
Query: 99 EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
E L++RP F + + + N + + + +M+ + H + +F L+
Sbjct: 69 EMLQSRPIPSIVDF-TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 127
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + K G +P + T ++ FC+ + A S++ MD PN
Sbjct: 128 SRLSLALALLGKMMKL-GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 186
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++ G K + +V ME+ G+++ YN I L + +A LL +M+
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + PN + ++ I F K+GN EA+ Y+ M + PN Y +++ C G
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDT 392
A ++KG P+ T +L+TG + +V + +L GLV + FT N
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 393 WNEIEAG 399
+AG
Sbjct: 367 HGYCQAG 373
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 1/282 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ LS + + ++ L ++ R N F I + + A +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM + +V +N+L+ I + K +F + + G PD+ TYN +I FC+
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCK 336
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + EM + + +A ++ L+ G+ + K KV M G+ +
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LC K +A +++++ M + +TY+ I G C+ +EA +R ++
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
G+ P++ Y TM+ +C+ G A C+ G++P+
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A+ F M++ +R +N L+ L+ + + + R+ + K I P++ + +
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTAL 260
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I F + + A ++ EM R+S+ PN ++ +L+ GF D + +M G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V YN I CK ++ + L EM +G+ ++ TY+ I+G+C+ G A+K
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M + G+SP+ Y ++ +C G E AL ++ + T ++ GL
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 368 GASKVSEA 375
K+ EA
Sbjct: 441 RTDKLKEA 448
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + K+ +V F AL+ + E + ++ E + + P++ TYN +I
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLI 296
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K P+ ++ L+ GF K ++ ED K+ M G+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN IH C+ K A+ + + M+ G+ P+ VTY+ + C +G E+A
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ S + + Y ++ +C+ + A + KG P+ ++++GL
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 369 ASKVSEAKELIGLVKE 384
EA +L +KE
Sbjct: 477 KGLQREADKLCRRMKE 492
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V +N L+ +K ++ ++F E TY G+ D TYN +I +C++ + A +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEM--TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M + P+ ++ L+ K E +++ +++ M + YN+ I LC+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K EA L + KG+KP+++ Y I G C+ G EA K R M G P+ +
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 324 Y 324
Y
Sbjct: 502 Y 502
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA A + F M + + + +N LL L E V +E + +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC-NNGKIEKALVMVEDLQKSEMDV 427
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I+ C + A+ + + RK +KP+A ++ +++G ++ + +K+
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 240 QMMERYGMKSGVSMYN 255
+ M+ G +Y+
Sbjct: 488 RRMKEDGFMPSERIYD 503
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 156 TIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
TI Y +V + IE + G++P+ TYN ++K FCE + A + +M K
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK 456
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ PN ++ L+ G+ + ++ ++L+ ME+ G+K V Y I+ LCK EA
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ +L +M+ +G+ PN+ Y+ I G C G ++A +F+ M + P Y ++
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-N 389
+CK G A E KG + T SL++G + A V +A EL +K+ K
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 390 VDTWNEIEAG 399
++T++ + AG
Sbjct: 637 LNTYHRLIAG 646
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 174/415 (41%), Gaps = 26/415 (6%)
Query: 4 ISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNP---EKILE 60
+ +L+T L + R L S +L K+P +S +L + P + +L
Sbjct: 64 VQKLQTLLQQGRTETARRLIRSMLLP---KSPFSSPSHLYTLFSLSSTPMKPLFSDMLLS 120
Query: 61 ICRAAALTPES-------HLDRLAFSIA-----INKLSEANYFNGISQYLEEL---KTRP 105
IC + + ES D + S+A + L + Q E+ RP
Sbjct: 121 ICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRP 180
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
D + + +I + + A+ M + V +N ++ L K K+ +
Sbjct: 181 D---QFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F E + P+ TYN +I +C+ A++I M ++++P +F +L+ G
Sbjct: 238 KLFDEMLDRR-VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + E+ +VL+ ME YG Y K + L +E + KG++
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
T S + CK+GN E+A++ + +GL+P + T+V C+ GD A +
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIE 416
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+ A G PN T SLV + EA++ I +V++ NV+T+N + G
Sbjct: 417 KMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG 471
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 2/324 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++ I L + + +E+ R N + I Y + E A + M
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ ++ FN+LL L A+ +E +RV E + YG PD TY + + +
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM-EVYGFVPDRFTYTTLFDGHLKCGN 337
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
++ ++ E RK ++ + L+ KE E +VL+ G+ +N
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
++ C++ +A +++M + G++PN VTY+ + FC+ N EEA+K + M G
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+ PN Y T++ + ++ +E KG PN + L+ L + + EA+
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517
Query: 377 ELIG-LVKEKFTKNVDTWNEIEAG 399
++G +V N +N + G
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDG 541
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A + A R F EM ++ ++ +N L+ L E + + E + G+ D+
Sbjct: 545 AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK-GLSFDVI 603
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I + + + A + M + IKP +++ L+AG KE V K+ Q M
Sbjct: 604 TYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKE-GLVLVEKIYQEM 662
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ + +YN IH + +A +L M ++G++P+ +TY+ I G K+G
Sbjct: 663 LQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRM 722
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ K M GL P + Y ++ CK D++ A + +E G+ P+ + +L
Sbjct: 723 HKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNL 782
Query: 363 VTGL 366
+TGL
Sbjct: 783 ITGL 786
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 134/325 (41%), Gaps = 6/325 (1%)
Query: 59 LEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII 118
+E A L P + + ++ + K E + ++++ + L N + I
Sbjct: 415 IEKMEAVGLRP----NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLID 470
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
YG++ + + + +EM++ L+ +V ++ L+ L + E + + + G+
Sbjct: 471 GYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHR-GVV 529
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ YN +I C + A+ EM + I P ++ L+ G K+ K + +
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ R G+ V YN I +A L + M G+KP TY I G K
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK 649
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +K Y+ M L P+ +Y +++ + GD + A A+G P+ T
Sbjct: 650 EG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMT 708
Query: 359 MKSLVTGLAGASKVSEAKELIGLVK 383
L+ G ++ + K L+ +K
Sbjct: 709 YNCLILGHFKEGRMHKVKNLVNDMK 733
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
E+ L V +N+L+ + A + ++ ++ E K GIKP L+TY+R+I A C
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELY-ETMKKSGIKPTLNTYHRLI-AGCGK 649
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
I EM + ++ P+ + AL+ + + + + ME G++ Y
Sbjct: 650 EGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTY 709
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I K + + K L+++M +G+ P + TY I G CK +F+ A +YR M
Sbjct: 710 NCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFE 769
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+G +P+ S+ ++ + + G A C E KG
Sbjct: 770 NGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 16/248 (6%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFK 134
+ ++I IN L + E+ TR L + +S+I Y A + A+ ++
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEI-TRKGLSFDVITYNSLISGYSSAGNVQKALELYE 626
Query: 135 EMDEHKLRHSVGAFNALLLA------LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
M + ++ ++ ++ L+ + + K Y+E+ ++ + PD YN +I
Sbjct: 627 TMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQM--------NLVPDRVIYNALI 678
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ E D A S+ + M+ + I+P+ ++ L+ G +KE + V ++ M+ G+
Sbjct: 679 HCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLI 738
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y++ I CKL+ A EM G P+ + I G ++G +A
Sbjct: 739 PKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVI 798
Query: 309 YRIMSNSG 316
M+ G
Sbjct: 799 CSEMNMKG 806
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 141/297 (47%), Gaps = 5/297 (1%)
Query: 93 GISQYLEELKTRPDLQN---ERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
G + E L TR D +RF +++I LY + M A+ MD+ +R +
Sbjct: 198 GDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTW 257
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N+L+ L KE ++F E PD TY +I +C + + A + EM+
Sbjct: 258 NSLIHGLCKYGRVKEAAQLFTEMAAAQAT-PDNVTYTTLIDGYCRAGNIEEAVKLRGEME 316
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ P +++ A++ ++ K ++VN++L M+ +++ N I++ CK
Sbjct: 317 ATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMT 376
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A + +M+ G++ N TY I+GFCK +EAK+ + M ++G SPN SV+ +V
Sbjct: 377 SACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLV 436
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
CK + + L E + +G P+ +SL+ L V +A+++ ++ K
Sbjct: 437 DGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSK 493
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 39/323 (12%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+ R + +++ Q+ A+R F +M L A ALL AL A+ +RVF
Sbjct: 113 DPRVPSWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVF 172
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E + G+ YN ++ ++ D++ A +++ MD + + S+ ++A + K
Sbjct: 173 DEMARA-GLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCK 231
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ + V M++ G+++ +N IH LCK + EA L EM + P++VT
Sbjct: 232 KGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVT 291
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY------------------------ 324
Y+ I G+C+ GN EEA K M +G+ P + Y
Sbjct: 292 YTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMD 351
Query: 325 -----------FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
T++ CK G +A K+ + G N T K+L+ G A ++
Sbjct: 352 ERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELD 411
Query: 374 EAKE-LIGLVKEKFTKN--VDTW 393
EAKE +V F+ N V +W
Sbjct: 412 EAKEAFFQMVDAGFSPNYSVFSW 434
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 34/239 (14%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT----- 174
Y +A E AV+ EM+ + V +NA+L L KEV ++ E +
Sbjct: 299 YCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQAD 358
Query: 175 -----------------------------YGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
G++ + TY +I FC++ + A
Sbjct: 359 HVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFF 418
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+M PN S F LV GF K+ + V + + + G+ ++Y I LC+
Sbjct: 419 QMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKG 478
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+A+ + D+M SKG+ +S+ Y+ Y + +G A M+ + L +Y
Sbjct: 479 LVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIY 537
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M+E+ ++ +N LL YK + I++ GI+ D+ TYN I C
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL-IDYMICKGIEADVCTYNVFIDNLC 314
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S+ AY +L +M ++ I PN ++ L+ GF KE K +V M ++ +
Sbjct: 315 TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 374
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C + EA LLD M + G++ N VTY + G CK FE AK+ M
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 434
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ + Y ++ +CK G + A+ G P+ T SL+ G +
Sbjct: 435 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 494
Query: 373 SEAKELI------GLVKEKFTKNVDTWNEIEAG 399
AKE+I GLV K + +N + G
Sbjct: 495 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 527
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I +Y + M ++AV TF+ + + SV N +L ++ K + V +F E G
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-G 228
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P++ T+N +I C + A ++L +M+ P ++ L+ + K+ +Y+
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ M G+++ V YNV I +LC + A+A LL +M + + PN VTY+ I GF
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K+G A + + MS LSPN Y ++ C GD+E AL A G N
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T +L+ GL K AK L+
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLL 431
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+VF E K + + P+ TYN +I C D A +L M+ ++ N ++G L+ G
Sbjct: 359 QVFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 417
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K EK+E ++L+ M M G Y V I LCK EA L+ M G+ P+
Sbjct: 418 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 477
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
+TYS I GFC+ GN + AK+ M SGL N +Y T++Y C+ G+ A+
Sbjct: 478 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 537
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
G + T LV+ L K+ EA++ IGLV T
Sbjct: 538 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 585
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+ F T G+ PD DTYN + + S + +L EM + P + + L+ G
Sbjct: 886 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 945
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ + K+ ME G S + + L K +A +LD ML + P
Sbjct: 946 RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA 1005
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ ++ FC+D EA K +M GL + Y ++ MC GD A +E
Sbjct: 1006 TFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 1065
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ PN TT LV ++ A+ + + ++L+ ++E+
Sbjct: 1066 RHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+R M+ LR + + LL L + ++ KR+ +E + + Y
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL-LERMRVNDMVVGHIAYTV 448
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A ++ M + + P+ ++ +L+ GF + + +++ M R G
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ I++ C+ EA + M G + T + + C+DG EA+
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
KF MS GL PNS Y ++ GD A F + I G P+F T SL+ GL
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628
Query: 367 AGASKVSEAKELI 379
+ EAK+ +
Sbjct: 629 CKGGNLVEAKKFL 641
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY+ +I FC + SA I+ M R + N + L+ F + +
Sbjct: 473 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 532
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY------ 289
KV +M G + NV + SLC+ K EA+ L M G+ PNS+TY
Sbjct: 533 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 592
Query: 290 ------------------------SHFIYG-----FCKDGNFEEAKKFYRIMSNSGLSPN 320
S F YG CK GN EAKKF + + +
Sbjct: 593 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVD 652
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
S +Y T++ CK G+ A+ + + +P+ T SL+TGL K A L G
Sbjct: 653 SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 712
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S F L+ + KE + + +++ G K V N+ + S+ K ++ +L E
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M KG+ PN T++ I G C +GN ++A + M +G P Y T++ + CK G
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNE 395
Y+ A+ I KG + T + L + ++A L+ + KE + N T+N
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343
Query: 396 IEAG 399
+ G
Sbjct: 344 LING 347
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 1/189 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T N ++ + C A L M R + PN+ ++ ++ G+ + M
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 609
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G Y + LCK EAK L+ + +SV Y+ + CK GN
Sbjct: 610 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 669
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKS 361
EA + M + + P+S Y +++ +C+ G TA+ ++ +G + PN
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729
Query: 362 LVTGLAGAS 370
LV GL+ A
Sbjct: 730 LVDGLSKAG 738
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 2/226 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ PD TY+ ++ C + +A + M R ++ PN + LV G K +
Sbjct: 684 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 743
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M + G +N I S + + +A M G+ PN TY+ ++G
Sbjct: 744 FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 803
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K Y M G+ P+ + +++ + K G + + + I +G + +
Sbjct: 804 FSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 863
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
T L+ + + K+ +A +L+ + + DT+N I GL
Sbjct: 864 QFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 36/286 (12%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+EM + AFNA++ + + + F + +G+ P+L TYN ++ F
Sbjct: 747 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM-RWWGVCPNLATYNILLHGFS 805
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE----------------------- 229
+ S+ + M R+ I P+ +F +L+ G K
Sbjct: 806 KKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQF 865
Query: 230 ------EKYEDVNK------VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
KY + K ++ M G+ YN + L K E+ +L EM
Sbjct: 866 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 925
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
L G+ P Y I G C+ G+ + A K M G + MV + G
Sbjct: 926 LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 985
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
E A+ + +P T +L+ +K++EA +L G+++
Sbjct: 986 EDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1031
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ + A +L M R + P ++F L+ F ++ K + K+ +ME G
Sbjct: 975 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1034
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V YNV I +C A A L +EM + + PN TY+ + N + +
Sbjct: 1035 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1094
Query: 307 KFYRIMSNSGL 317
K + GL
Sbjct: 1095 KLLTDLQERGL 1105
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTY 184
TE A+ M +L ++ F L+ +D K + + ++ + G+K D+ Y
Sbjct: 985 TEDAMLVLDHMLRMRLLPTIATFTTLMHRF--CRDAKIAEALKLKGVMELCGLKLDVVAY 1042
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C + DS++A+ + EM + + PN +++ LV K+L ++
Sbjct: 1043 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1102
Query: 245 YGMKS 249
G+ S
Sbjct: 1103 RGLIS 1107
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ T+ V+K+FC+ Y + +M I P+ + L+ G+ K+ + ++ N++
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G++ + YN +++ CK K EA L M KG +P+ VTYS I G CK
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 299 DGNFEEA-KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G EA + + M G S N+ Y ++ +CK + E A +E +KG+VP+
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
T ++++GL KVSEAK+
Sbjct: 186 TYNTILSGLCRMGKVSEAKQF 206
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A R ++EM L S+ +N+LL A KE +F + G +P
Sbjct: 53 YAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK-GFEP 111
Query: 180 DLDTYNRVIKAFCESSDSSSAYSIL-AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D+ TY+ +I C++ + A +L +M + N ++ AL+ G K+E E K+
Sbjct: 112 DVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKL 171
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ M G YN + LC++ K +EAK D M S+G P+ V Y+ + K
Sbjct: 172 LEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 231
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G +EA K ++ + G P++ Y +++ + + + + A K+ +A G PN T
Sbjct: 232 EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291
Query: 359 MKSLVTGLAGASKVSEAKEL------IGLVKEKFTKNV 390
+++G A KV +A ++ IG V + T N+
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 5/312 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTF 133
+A++ IN L + + LEE+ ++ + + ++ IL G M A + F
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDN--ITYNTILSGLCRMGKVSEAKQFF 207
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M V A+N LL AL E ++F + G PD TYN ++
Sbjct: 208 DSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLAR 266
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S+ A + +M PN +++ +++G + +K +D +KVL+ M + G V
Sbjct: 267 KSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT 326
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LCK +A L M+ G P+ V+YS + G CK +A+ + M
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
L P+ + ++ +CK G + A + G P++ +L+ GL +
Sbjct: 387 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHI 446
Query: 374 EAKELIGLVKEK 385
+A L +KEK
Sbjct: 447 QADRLTQAMKEK 458
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD YN +I + + A + EM ++P+ ++ +L+ F KE K ++
Sbjct: 38 GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA 97
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA-KALLDEMLSKGMKPNSVTYSHFIY 294
++ + M G + V Y+ I LCK K EA + L +M+ +G N+V Y+ I
Sbjct: 98 MELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN 157
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CKD N E A K M++ G P++ Y T++ +C+ G A F ++G+ P
Sbjct: 158 GLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
+ L+ L K EA +L ++ + + + T+N I GL +
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 266
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 138/302 (45%), Gaps = 11/302 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
K+LE + P D + ++ ++ L + Q+ + + +R PD+ ++
Sbjct: 170 KLLEEMASKGYVP----DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV--AYN 223
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
LY + T+ A++ FK++ +N++LL L + E + +F +
Sbjct: 224 GLLDALYKEGK-TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVA 282
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ G P+ TY+ V+ C + A+ +L EM + P+ ++ L+ G K +
Sbjct: 283 S-GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 341
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+++ M G + Y+V ++ LCK K +A+ L D M+ + + P+ VT++ +
Sbjct: 342 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G CK G +EAK M+ SG +P+ Y T++ + K G + A + KG++
Sbjct: 402 DGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461
Query: 354 PN 355
+
Sbjct: 462 SD 463
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+ V + S CK K + L ++ML G+ P+ + Y+ I G+ K G +EA + Y M
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL P+ Y +++ CK + A+ K KG+ P+ T ++++GL KV+
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 374 EAKELI--GLVKEKFTKNVDTWNEIEAGL 400
EA E++ +++ + N +N + GL
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGL 159
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN T+ + FCK G + K + M ++G+SP+ Y ++ K G + A
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+E ++ G P+ T SL+ +K+ EA EL + EK F +V T++ I +GL
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 3/279 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKE 135
+++ INK +A ++ I + + +K + +E F + + +YG A A+
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + S +FN +L L AK + E+ ++F+ PK G++ D N +IK CES
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL-GVEIDACCLNILIKGLCESG 216
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A +L E ++ +PN +F L+ GF + K+E+ K+L+ ME+ ++ +N
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I L K + E LL+ M KG +PN TY +YG EAK+ M +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G+ P+ Y MV +C+ ++ + G+VP
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A IL M P++ SF ++ + +++++K+ + G++ N+ I
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC+ A LLDE + +PN +T+S I GFC G FEEA K M + P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ + ++ + K G E + + KG PN T + ++ GL + EAKE++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++ ++ + I G C+ GN E A + PN + ++ C G +E A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
+ + P+ T L++GL +V E +L+ +K K + N T+ E+ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 400 L 400
L
Sbjct: 317 L 317
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 154/359 (42%), Gaps = 38/359 (10%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
A +A+ K ++ + + +E+L RP++ I + G+A + A F+ M
Sbjct: 232 ALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT---FTICIRVLGRAGKIDEAYEIFRRM 288
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP------------------------ 172
D+ + + L+ AL A + K +F++
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348
Query: 173 ----------KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+ G PD+ T+ ++ C++ D A++ M ++ I PN ++ L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G + + ED K+L ME G++ YN+ I K + +A ++M +KG+
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN V + +Y + G EAK + + +GL+P+S Y M+ K G + A+
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
E I G P+ + SL+ L A +V EA ++ +K+ K + V T+N + +GL
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL 587
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ + TE A FK+M FN LL + E+ ++ E + KPD
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDA 858
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN VI + +S++ A ++ +P ++G L+ G K + E+ ++ +
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M YG K +++N+ I+ K+ A L M+++G++P+ +Y+ + C G
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA ++ + ++GL P+ Y ++ + K E AL E +G VP+ T S
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038
Query: 362 LVTGLAGASKVSEAK------ELIGLVKEKFTKN 389
L+ L A V +AK +L GL + FT N
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+G++ T AV TF++M + ++ A NA L +L +E K +F + G+ P
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGL-RENGLAP 505
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++K + + A ++L+EM R +P+ +L+ YK + ++ ++
Sbjct: 506 DSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF 565
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ + V YN + L K + +A L + M+ K PN+++++ + FCK+
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E A K + M+ P+ Y T++Y + K A F + + K P+ T+
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTI 684
Query: 360 KSLVTGLAGASKVSEAKELIG--LVKEKFTKNVDTWNEIEAG 399
+L+ GL ++ +A + + + +F N W ++ G
Sbjct: 685 CTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP L TY+ ++ A + DS +L EM+ ++PN +F + + K ++
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M+ G + Y V I +LC + AK L +M + G KP+ V Y +
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F G+ + K+F+ M G P+ + +V +CK D++ A +G +PN
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG 380
T +L+ GL A ++ +A +L+G
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLG 426
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 156/378 (41%), Gaps = 26/378 (6%)
Query: 40 DKTRAALTLLKSESNPEKILEICRAAALTPESHL------------DRL--AFSIAINKL 85
D A L+++ + + +K + CR A PE + D + + +
Sbjct: 44 DFQTATLSMVNWKKHRKKRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPI 103
Query: 86 SEANYFNGISQYLEELKTRP--DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
+YF IS++ L T + E H + E F+ M + +R
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVH--------DKVEDMAAVFEFMQKKIIRR 155
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ + + AL+I +++ V + K G + +YN +I +S A +
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKA-GFVLNAYSYNGLIHLLIQSGFCGEALEV 214
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M + +KP+ ++ AL+ K+ E V +L+ ME G++ V + + I L +
Sbjct: 215 YRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGR 274
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K EA + M +G P+ VTY+ I C G E AK+ + M +G P+ +
Sbjct: 275 AGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVI 334
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV- 382
Y T++ GD +T F + A G++P+ T LV L A EA ++
Sbjct: 335 YITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR 394
Query: 383 KEKFTKNVDTWNEIEAGL 400
K+ N+ T+N + GL
Sbjct: 395 KQGILPNLHTYNTLICGL 412
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
++F +F K GI P L +YN +I E + A+ + +M P+A +F L+A
Sbjct: 773 QIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV 832
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K K ++ ++ + M K YN+ I SL K +A +++S +P
Sbjct: 833 HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
TY I G K G EEA + + MS+ G PN +++ ++ K GD ETA K
Sbjct: 893 PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ +G P+ + LV L A +V EA
Sbjct: 953 RMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 36/303 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I L Q+ A+ ++ M L+ S+ ++AL++AL +D E+ V ++ + G
Sbjct: 199 IHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD-SEMVMVLLKEMEDLG 257
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++P++ T+ I+ + AY I MD + P+ ++ L+ + E+
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G K +Y + K +M + G P+ VT++ +
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF--CKESI------ 348
CK +F+EA + +M G+ PN Y T++ + + G E AL ES+
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTA 437
Query: 349 ---------------------------AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
AKG VPN + + LA ++ EAK +
Sbjct: 438 YTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497
Query: 382 VKE 384
++E
Sbjct: 498 LRE 500
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 1/247 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
++G++ +KEM + + +N ++ +L + + + F + + +
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFR 890
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P TY +I + A + EM KPN + F L+ G+ K E ++
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G++ + Y + + LC + EA +E+ S G+ P+ + Y+ I G K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
EEA Y M N G+ P+ Y +++ + G E A +E G P+ T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 359 MKSLVTG 365
+L+ G
Sbjct: 1071 YNALIRG 1077
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 1/242 (0%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
++N + A+ F ++ R + + L+ L +E R+F E YG KP+
Sbjct: 869 AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD-YGCKPN 927
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+N +I + + D+ +A + M + I+P+ S+ LV + ++
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFN 987
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++ G+ YN I+ L K ++ EA AL +EM ++G+ P+ TY+ + G
Sbjct: 988 ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
E+AK+ Y + +GL P+ Y ++ + E A K + G PN T
Sbjct: 1048 MVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Query: 361 SL 362
L
Sbjct: 1108 QL 1109
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A TF M + + ++ +N L+ L A ++ ++ ++ G++P TYN
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM-ESVGVQPTAYTYNI 442
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
I F +S ++ A +M K I PN + A + + + + + + G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN+ + K+ + EA LL EM+ G +P+ + + I K G +EA
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M + LSP Y T++ + K G + A+ + I K PN + +L+
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+V A ++ + K +V T+N + GL
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L + K +K V + E + G
Sbjct: 62 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILEC-G 120
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ SF L+ G+ + ++
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 241 CKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 301 ITYTTLIDGCCKEGDLETAFE 321
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLI 202
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 203 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLS 262
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ E
Sbjct: 263 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEH 322
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M ++GL P++ Y ++ CK
Sbjct: 323 RKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCK 382
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD T KE G VP+ T L+ G
Sbjct: 383 KGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + ++N ++ +
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITK-WGLRPSVVSFNTLMNGYI 171
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ETA K I + + +L++GL +
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 351
Query: 373 SEAKELI---------------GLVKEKFTKNVDTWN 394
+A++++ ++ +F K D W
Sbjct: 352 LDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWT 388
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-FGALVA--GFYKEEKYEDVNK 237
LD+Y +I C S A S++ + + K +AS+ F A++ G + + Y
Sbjct: 2 LDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 61
Query: 238 VLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAEAKALLDEMLSKGM 282
+ +E ++ + Y + + + KL+ +E+L G
Sbjct: 62 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGY 121
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
+ ++ ++ FCK+G+ A+ + ++ GL P+ + T++ + GD +
Sbjct: 122 PASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 181
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 182 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANEL 217
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 3/289 (1%)
Query: 88 ANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVG 146
Y + + L E+ DL ++F +++ A + AV EM + +
Sbjct: 186 GRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVV-AAE 244
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
AFN +L A+ A D K ++F F + G P TYN ++ + +A ++
Sbjct: 245 AFNPVLRAMLRAGDVKGAAKLF-GFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRR 303
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+R+ + P ++GA+V G + + +D KV + MER G+ +Y+ I CK +
Sbjct: 304 MEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGE 363
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A + + M++ ++PN V YS I G G EA+ +R M +S +PN Y +
Sbjct: 364 IDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGS 423
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ K GD AL +E I G VPN + L+ GL ++ +A
Sbjct: 424 IIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDA 472
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 140 KLRHSVGAFNALLLALT---IAKD---YKEVK-RVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+L ++ +FN LL + + +D Y +V R+ E + + PD TY+ V+ A
Sbjct: 161 RLAPTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALA 220
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A +++ EM + A +F ++ + + K+ M+ G +
Sbjct: 221 DAGRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTA 279
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YNV +H L + A ++ M +G+ P +TY + G + G ++A K M
Sbjct: 280 TYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEM 339
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+GL+ N VY T++ CK G+ + AL + +A PN +++ GLA K+
Sbjct: 340 ERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKM 399
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+EA+ L ++ K N+ T+ I G
Sbjct: 400 TEAELLFREMIHSKCAPNIITYGSIIQG 427
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 8/307 (2%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTF 133
AF+ + + A G ++ ++ + P H +++ G+A A+
Sbjct: 245 AFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAG---AAMGVM 301
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M+ + V + A++ L K+ +V E + G+ + Y+ VI FC+
Sbjct: 302 RRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERN-GLAWNEFVYSTVITGFCK 360
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + A + M ++PN + A++ G K + + + M +
Sbjct: 361 SGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIIT 420
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I K+ + A ++ +EM+ G PN+V+YS I G C G ++A ++ M
Sbjct: 421 YGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHML 480
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKV 372
+ G +P++ Y +M+ +C G + L + +A G P+ + L+ GL A +
Sbjct: 481 DRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDL 540
Query: 373 SEAKELI 379
A +L+
Sbjct: 541 PRAMDLL 547
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 8/298 (2%)
Query: 108 QNERFHAHSIILYGQAN----MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
QN + + +L+G A + H + D L V FN L+ A + +
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV--FNILIRAYAKNETLDK 313
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
FIE + G P++ TY VI C++ A S ++M + + P+ +F +L+
Sbjct: 314 AMTAFIEM-RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G +++ V K+ M G+ N + SLCK + EA D+++ G+K
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ V+Y+ I G+C DG +E+ K M + GL P++ Y ++ CK G + AL
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+E +K PN T ++ GL A +V A+E + +V ++T+N + GL
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 132/285 (46%), Gaps = 7/285 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E AV F +M L + F +L+ L ++K+V+++ E GI P+
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR-GIHPNA 400
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
N ++ + C+ A+ ++ +KP+ S+ L+ G+ + K ++ K+L
Sbjct: 401 IFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGR 460
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G++ Y+ ++ CK + +A AL EM SK +KPN++TY+ ++G G
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A++FY + +SG+ + Y ++ +C+ + AL + +K + T
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNI 580
Query: 362 LVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGL 400
++ GL ++ +AK L GLV + + + IE GL
Sbjct: 581 MIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGL 625
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 4/291 (1%)
Query: 113 HAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +I++ Y + + A+ F EM + +V + ++ L A ++ F +
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G+ PD+ T+ +I C + + EM + I PNA ++ KE
Sbjct: 356 MV-SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEG 414
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ + + + G+K V Y + I C K E+ LL M+S G++P++VTYS
Sbjct: 415 RVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS 474
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ G+CK+G ++A YR M + + PN+ Y +++ + G A F + +
Sbjct: 475 ALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
G T ++ GL S V EA + GL ++F V T+N + GL
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGL 585
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TY+ +I +C+ + A +I M R+ P+A ++ L+ G+ + D+
Sbjct: 220 GLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDM 279
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L +M + G+ ++N+ I + K +A EM KG PN VTY+ I
Sbjct: 280 HDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDI 339
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G E+A + M + GLSP+ + ++++ +C G+++ E I +G PN
Sbjct: 340 LCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPN 399
Query: 356 FTTMKSLVTGLAGASKVSEAKE 377
+ +++ L +V EA +
Sbjct: 400 AIFLNTIMDSLCKEGRVLEAHD 421
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 1/254 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AVR K+M L+ V ++ L+ E + +F + G PD TY
Sbjct: 207 EEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR-GQNPDAYTYRT 265
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ + + +LA M + I F L+ + K E + M + G
Sbjct: 266 LLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG 325
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V Y I LCK + +A + +M+S+G+ P+ +T++ I+G C G +++ +
Sbjct: 326 FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVE 385
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K M N G+ PN+ T++ +CK G A F + I G P+ + L+ G
Sbjct: 386 KLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGY 445
Query: 367 AGASKVSEAKELIG 380
K+ E+ +L+G
Sbjct: 446 CLDGKMDESIKLLG 459
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 51/244 (20%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
Y P++ +YN VI + + AY++ EM + PN ++ +++ G K + +
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192
Query: 235 VNKVLQMM----------------ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
VLQ M G++ V Y++ I CK+ +C EA+ + D M+
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252
Query: 279 SKGMKPNSVTYSHFIYGFCKDG-----------------------------------NFE 303
+G P++ TY ++G+ G +
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + M G SPN Y T++ +CK G E A+ + +++G P+ T SL+
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372
Query: 364 TGLA 367
GL
Sbjct: 373 HGLC 376
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 36/235 (15%)
Query: 184 YNRVIKAFCESSDSSSA----------YSILAEMDRKSIKPNASSFGALVAGFYK----- 228
+NRV+ SSS ++ +A++ + +A +FG L+ F
Sbjct: 52 FNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLD 111
Query: 229 ---EEKYEDVNKVLQMM--ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
EE+ + MM + Y V YN+ I+ L K + +A L EML +G
Sbjct: 112 FALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFP 171
Query: 284 PNSVTYSHFIYGFCK----------------DGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
PN VTY+ I G CK G EEA + + MS GL P+ Y +
Sbjct: 172 PNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLL 231
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ + CK G A + +G P+ T ++L+ G A + + +L+ L+
Sbjct: 232 IDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALM 286
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 113/284 (39%), Gaps = 64/284 (22%)
Query: 180 DLDTYNRVIKAFC-----------ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
D T+ +I+ FC ES S +A ++A+ D + PN S+ ++ G +K
Sbjct: 93 DACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMAD-DGYNCPPNVLSYNMVINGLFK 151
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-------- 280
E + + + M G + YN I LCK + +A+A+L +M K
Sbjct: 152 EGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVR 211
Query: 281 --------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY--- 329
G++P+ VTYS I +CK G EA+ + M G +P++ Y T+++
Sbjct: 212 LLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYA 271
Query: 330 -------------FMCKGG-------------------DYETALGFCKESIAKGWVPNFT 357
M + G + A+ E KG+ PN
Sbjct: 272 TKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVV 331
Query: 358 TMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
T +++ L A +V +A +V E + ++ T+ + GL
Sbjct: 332 TYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 75/164 (45%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KP+ TYN ++ + +A ++ I+ +++ ++ G + ++
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEAL 560
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ Q + + V +N+ I L K+ + +AK+L +L G+ P+++ Y I
Sbjct: 561 RMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSH 620
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
++G EE+ + + M +G + NS +V + + GD A
Sbjct: 621 IEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ IN L + + + + L ++ +PD+ HS+ Q A
Sbjct: 178 DVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT---QAF 234
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F EM + ++ N+L+ AL ++K V + E + I P+ + V+ A
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS-KIMPNAISLTTVVDA 293
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + A+ ++ M + ++P+ ++ AL+ G + ++ KV MM G
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I+ CK+ + +A L +EM + + PN+VTY+ I+G C G ++A +R
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFR 413
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G P+ Y ++ ++CK + A+ K P+ ++ G+ A
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ +A++L + K K NV T+N + GL
Sbjct: 474 ELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 12/289 (4%)
Query: 118 ILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEF 171
++Y N+ E H EM + K+ + + ++ AL +A+ + V +F
Sbjct: 255 LVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF--- 311
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G++PD+ TY +I C S+ A + M K PN S+ L+ G+ K E+
Sbjct: 312 --QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ + + M R + YN IH LC + + +A AL EM++ G P+ VTY
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ CK+ + ++A + + S L P+ +Y ++ MC+ G+ E A +KG
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
PN T + GL + EA +L + E + + T+N I G
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQG 538
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 12/272 (4%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT-----YGIKPDLDTYNRVI 188
++MD + H+V N L+ + + RV F G +PD ++ +I
Sbjct: 98 RKMDSFGIPHNVYTLNVLI------NSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLI 151
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C A + +M + +P+ + L+ G K ++L+ ME+ +
Sbjct: 152 KGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQ 211
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +Y IHSLCK R+ +A L EM++KG+ PN VT + +Y C G ++
Sbjct: 212 PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M +S + PN+ T+V +CK G A G P+ T +L+ G
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
S++ EA ++ ++ K NV ++N + G
Sbjct: 332 RSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ Y +I C++ +S+A +L M++ + +P+ +G L+ K+ +
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA 233
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ + N +++LC L + LL+EM+ + PN+++ + +
Sbjct: 234 FNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA 293
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G +A +M SG+ P+ Y ++ C + + A+ + KG PN
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ +L+ G ++ +A L + ++K N T+N + GL
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N + A+ +F M S+ F +L ++T K Y V + + ++GI
Sbjct: 49 YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM-DSFGIPH 107
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ T N +I +FC + + A+S+LA++ + +P+ +SF L+ G
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKG-------------- 153
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
LC + EA L D+M+ +G +P+ V Y+ I G CK
Sbjct: 154 ---------------------LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKT 192
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ A + R M P+ VY T+++ +CK A E I KG PN T
Sbjct: 193 GHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTC 252
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKN 389
SLV L + L+ +V K N
Sbjct: 253 NSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV+ F M +V ++N L+ + + +F E + I P+ TYN
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI-PNTVTYNT 394
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C A ++ EM P+ ++ L+ K + +L+ +E
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + +Y + I +C+ + +A+ L + SKG+KPN TY+ +G CK G +EA
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + M + S + Y T+ + + A+ +E +A+G+ + +T LV L
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGML 574
Query: 367 A 367
+
Sbjct: 575 S 575
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 1/216 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ F+EM KL + +N L+ L ++ +F E G P
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVAC-GQIP 422
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY ++ C++ A ++L ++ ++ P+ + ++ G + + ED +
Sbjct: 423 DLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K V YN+ H LCK EA L EM + TY+ GF ++
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
A + M G S + S +V + G
Sbjct: 543 NETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 150/310 (48%), Gaps = 9/310 (2%)
Query: 101 LKTRPDLQNE----RFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
L+ D++N+ ++++I++ G + + A EM L+ + FN L+ A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
E +F E P+ G KPD+ T+N +I CE + A +L +M + +
Sbjct: 469 FCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N ++ L+ F + + ++ K++ M G YN I LC+ + +A++L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
++ML G P++++ + I G C+ G EEA +F + M G +P+ + +++ +C+
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTW 393
G E L ++ A+G P+ T +L++ L V +A L+ +++ F N TW
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 394 N-EIEAGLPQ 402
+ +++ +PQ
Sbjct: 708 SILLQSIIPQ 717
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 7/327 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + I+ LS+ N N Q LEE+ + + I+ + + A +
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + L+ L K +F PK P++ +N +I F
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHG 367
Query: 196 DSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A ++L++M I P+ ++ +L+ G++KE +VL M G K V Y
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + CKL K EA +L+EM + G+KPN+V ++ I FCK+ EA + +R M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G P+ + +++ +C+ + + AL ++ I++G V N T +L+ ++ E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 375 AKELIG-LVKEKFTKNVDTWNEIEAGL 400
A++L+ +V + + T+N + GL
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGL 574
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 20/264 (7%)
Query: 153 LALTIAKDYK------EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
L ++I +DY + R+ +E Y +P +YN V++ + A ++ +
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + I P +FG ++ F + + +L+ M ++G +Y IHSL K +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA LL+EM G P++ T++ I G CK EA K M G +P+ Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------- 379
++ +CK G + A K+ + P +L+ G ++ +AK ++
Sbjct: 328 LMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 380 GLVKEKFTKN---VDTWNEIEAGL 400
G+V + T N W E GL
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGL 407
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD Y +I ++ A S+ + M K + ++ L+AGF ++++ +
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++LQ M+ G++ V YN + CK A LL +M+ G +P+ +T+ ++G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G +EA + R M SG+ PN+ +Y T++ F+CK GD + A+ E K N
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
TT +L+ GL + +A EL+ ++E+
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREE 557
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY+ ++ A +++ A + E + P+A + +++G + + ED + M
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G K YN+ I C+ ++ EA LL EM G++P+ TY+ + G CK G+F
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ M + G P+ + T+V+ CK G + AL + G PN +L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ L V A EL +KEK NV T+N + GL
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G K D YN +I FC AY +L EM I+P+ ++ L++G K +
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V+++L M G + V + +H CK+ K EA +L M G+ PN+V Y+
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
I CK G+ + A + + M + N + +
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTF 531
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 24/383 (6%)
Query: 33 KTPLTSKDKTRAALT-LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYF 91
+ P S A L+ LL S+PE A+ D AF+ + L+
Sbjct: 93 RVPPPSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDV 152
Query: 92 NGISQYLEELK----TRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKL--RH 143
G+++ ++ RPD+ + I++ G +A A+R M L R
Sbjct: 153 PGMARIYALMQGCASVRPDVVT-----YGILVNGLCKAGRVGDALRVLDGMSRQDLDIRP 207
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIE--FPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
V N ++ L + +E F+E +G P+ TYN +I AFC + S AY
Sbjct: 208 DVVTLNTVVDGLCKSGRVQEA-LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM----KSGVSMYNVR 257
++ +M+ + + N + +V G + + + + E+ + K Y+
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTL 324
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ +L A L E +S+G P+++ Y I G + G E+A M +G
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
++ Y ++ C+ A +E G P+ T +L++G A + E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444
Query: 378 LIG-LVKEKFTKNVDTWNEIEAG 399
L+G ++ + +V T+ + G
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHG 467
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 12/330 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L + + I KL + + + L ++K ++ + Y + + + A++ F
Sbjct: 74 LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR 133
Query: 136 MDEHKLRHSVGAFNALLLALT--IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ E + +V +N LL AL + + V+ E + G++P++ TYN ++KA C+
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVY-ENMRGEGMEPNVFTYNVLLKALCK 192
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM ++ P+ S+ +VA ++ + E+ +V + R+G + VS+
Sbjct: 193 NGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVAR---RFGAEGVVSV 249
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
N I LC+ + E L+DEM+ G+ PN V+YS I G E A M
Sbjct: 250 CNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMI 309
Query: 314 NSGLSPNSSVYFTMV--YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
G PN + +++ YF+ GG +G + + +G PN +L+ GL +
Sbjct: 310 RRGCRPNVHTFSSLMKGYFL--GGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGN 367
Query: 372 VSEAKELIG-LVKEKFTK-NVDTWNEIEAG 399
++EA ++ G + K+ F + NV T++ + G
Sbjct: 368 LAEAVDVCGRMEKDCFCRPNVTTYSTLVHG 397
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V NAL+ L EV + E G+ P++ +Y+ VI + + A ++L
Sbjct: 247 VSVCNALICGLCREGRVGEVFGLMDEMVGN-GVDPNVVSYSSVISWLSDVGEVELALAVL 305
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+M R+ +PN +F +L+ G++ + + + ++M G++ V +YN ++ LC
Sbjct: 306 GKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCS 365
Query: 265 RKCAEA------------------------------------KALLDEMLSKGMKPNSVT 288
AEA + ++M++ G++PN V
Sbjct: 366 GNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVV 425
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ + CK+ F++A + M+ G P + T + +C GG A+ +
Sbjct: 426 YTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQ 485
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAG 399
G +P+ T L+ GL +++ EA ELI ++E K N+ T+N + G
Sbjct: 486 RYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYG 537
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 2/252 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S ++ +A G S+ ++ N + + + + +M + A R M
Sbjct: 391 YSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMA 450
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+V FN + L RV + + YG PD TYN ++ ++
Sbjct: 451 TDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQR-YGCLPDTRTYNELLDGLFSVNEL 509
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A ++ E++ + ++ N ++ ++ GF K E V +VL M G+K NV
Sbjct: 510 KEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVV 569
Query: 258 IHSLCKLRKCAEAKALLDEMLS-KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I++ KL K A LD + + K + P+ + ++ ++G C EEA + M N G
Sbjct: 570 IYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKG 629
Query: 317 LSPNSSVYFTMV 328
+ PN + + +V
Sbjct: 630 IFPNIATWDVLV 641
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
V ++ M +R +V +N LL L + + E V K +P++ TY+ ++
Sbjct: 336 GVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLV 395
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ D A + +M ++PN + ++V K ++ +++ M G
Sbjct: 396 HGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCP 455
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +N I LC + A ++D+M G P++ TY+ + G +EA +
Sbjct: 456 PTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACEL 515
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R + + N Y T++Y G E L + G P+ T+ ++ +
Sbjct: 516 IRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSK 575
Query: 369 ASKVSEAKELI 379
KV A + +
Sbjct: 576 LGKVRTAIQFL 586
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 1/307 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
HLD++++ IN L + Q L+ + + N + I +A + A
Sbjct: 163 HLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFD 222
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ +M ++ V +NAL+ + +F + K I P++ T+N ++ F
Sbjct: 223 LYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE-NINPNVYTFNILVDGF 281
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A +LA M + IKP+ ++ +L+ G+ K + M G+ + V
Sbjct: 282 CKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANV 341
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+Y ++ CK++ EA L +EM + + PN VTYS I G CK G A K
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G PN Y +++ +CK + A+ +G P+ T L+ GL + +
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461
Query: 372 VSEAKEL 378
+ +A+ +
Sbjct: 462 LEDAQNV 468
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PD+ TYN +I F S + A + +M +++I PN +F LV GF KE K D
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
VL +M + +K V YN + C + K +AK + D M S G+ N Y+ + GF
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK +EA + M + PN Y +++ +CK G AL E +G PN
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
T S++ L V +A L+ +K++ + ++ T+ + GL Q
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ 458
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 177/409 (43%), Gaps = 18/409 (4%)
Query: 3 FISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEIC 62
FI +++ LFSQ HH+ ++++SS + L K+ T K S+ K
Sbjct: 20 FIGLFPSSIRLFSQLHHKQDEENNLISSFNHL-LLHKNPTPPTFQFNKILSSLVKAKHHS 78
Query: 63 RAAALTPESHL-----DRLAFSIAINKLSEANY----FNGISQYLEELKTRPDLQNERFH 113
A +L + L D F+I IN S+ F+ ++ L++ P
Sbjct: 79 TALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKK-GYHPTAITFNTL 137
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAF-NALLLALTIAKDYKEVKRVFIEFP 172
+ L G + H H + S G N L I + +KRV +
Sbjct: 138 IKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL- 196
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++P+ YN +I C++ + A+ + ++M K I P+ ++ AL++GF K
Sbjct: 197 ----VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKL 252
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ M++ + V +N+ + CK K +AK +L M+ +KP+ VTY+
Sbjct: 253 NYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSL 312
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G+C +AK + M++ G+ N +Y TMV CK + A+ +E +
Sbjct: 313 MDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
+PN T SL+ GL ++ A +L+ + ++ N+ T++ I L
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A+ F +M + + +V FN L+ + K V K IKPD+ TYN +
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD-DIKPDVVTYNSL 312
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ +C + + A I M + N + +V GF K + ++ + + M +
Sbjct: 313 MDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V Y+ I LCKL + A L+DEM +G PN VTYS + CK+ + ++A
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ + G+ P+ Y ++ +C+ G E A ++ + KG+ + ++ G
Sbjct: 433 LLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFC 492
Query: 368 GASKVSEAKELI 379
+A L+
Sbjct: 493 DKGFFDKALALL 504
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ V +N+L+ + K +F + + G+ ++ Y ++ FC+
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF-DSMASGGVIANVQIYTTMVNGFCKIK 355
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ EM + I PN ++ +L+ G K + K++ M G + Y+
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYS 415
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LCK +A ALL + +G++P+ TY+ I G C+ G E+A+ + +
Sbjct: 416 SILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK 475
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + + Y M+ C G ++ AL + G +PN T + ++ L + A
Sbjct: 476 GYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTA 535
Query: 376 KELI 379
++L+
Sbjct: 536 EKLL 539
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N A F M + +V + ++ K E +F E + I P
Sbjct: 316 YCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM-RCRKIIP 374
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY+ +I C+ A ++ EM + PN ++ +++ K + +L
Sbjct: 375 NVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALL 434
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++ G++ + Y + I LC+ + +A+ + +++L KG + Y+ I GFC
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G F++A M ++G PN+ Y ++ + + + +TA +E I +G +
Sbjct: 495 GFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 62 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 120
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PNSVT++ I G
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 240
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 300
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 301 ITYTTLIDGCCKDGDLDTAFE 321
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK-WGLRPSVVSYNTLMNGYI 171
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD +TA K I + + +L++GL
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXS 351
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 352 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 387
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 202
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN+ +F L+ G K + + ++ + M +
Sbjct: 203 NGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 262
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CKDG+ +
Sbjct: 263 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEH 322
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 323 RKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 382
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G VP+ T L+ G
Sbjct: 383 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L KL+ +E+L G + ++ ++ FCKDG+ A+ + ++ GL
Sbjct: 97 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGL 156
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ + GD + +A G P+ T L+ GL SK+ +A E
Sbjct: 157 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANE 216
Query: 378 L 378
L
Sbjct: 217 L 217
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE- 206
+N ++ L A+ + V E + PDL TY+ VI FC+ + A IL E
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 71
Query: 207 -------------------------MDR----------KSIKPNASSFGALVAGFYKEEK 231
MDR K ++P+ +F AL+ G+ K
Sbjct: 72 VTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 131
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK---GMKPNSVT 288
++ K+ + + + + I LC+ R+ EA L EM + KP+ VT
Sbjct: 132 VDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVT 191
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ I GFCK GN E+A K +M PN Y ++++ +CK GD + AL +
Sbjct: 192 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 251
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+KG VPN T +L+ GL A KV A+ L+
Sbjct: 252 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 282
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 8/333 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRT 132
D + ++ ++ L + + + E+K + ++ ++F ++I + A + A++
Sbjct: 80 DVVTYTSVVDGLCRDGKMDRACEMVREMKLK-GVEPDKFTFSALITGWCNARKVDEALKL 138
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKA 190
+KE+ R + +AL+ L + E +F +E + KPD+ TY +I
Sbjct: 139 YKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDG 198
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC+S + A +L M+ + PN ++ +L+ G K + + + M G
Sbjct: 199 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 258
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y IH LC K A+ L+DEM + ++V+Y+ + G+C+ G EEAK+ ++
Sbjct: 259 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFK 318
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI--AKGWVPNFTTMKSLVTGLAG 368
M+ P+ Y +V C E A F E++ A G P+ T +V G +
Sbjct: 319 EMAAKSCLPDRITYTCLVRGFCNASRLEEAR-FLLENMKTAAGIDPDVVTYSIVVAGYSR 377
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
A + EA E I ++ N T++ + GL
Sbjct: 378 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 6/230 (2%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ P+ TYN V+ C++ +S AY +L EM D KS+ P+ ++ ++ GF K+ + +
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 236 NKVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L +M+ R GM V Y + LC+ K A ++ EM KG++P+ T+S I
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK---G 351
G+C +EA K Y+ + S ++ ++ +C+ A +E +
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
W P+ T +L+ G + + +A +++G+++ K NV T++ + GL
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 6/249 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++NALL +E K++F E + PD TY +++ FC +S A +L
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCL-PDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 207 MDRKS-IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M + I P+ ++ +VAG+ + +++ + + +Q M + Y+ I LCK
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A E+L KP+ VTY+ I G C EEA M N + P+ +
Sbjct: 415 RVNHAM----EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+++ +C+ GD + A A G P T +L+ G + ++ A EL +++ K
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Query: 386 FTKNVDTWN 394
K+ N
Sbjct: 531 AKKSSSAAN 539
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 40/299 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E A + FKEM + L+ A +E + + GI P
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 363
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE---------- 229
D+ TY+ V+ + + A + EM +++ PNA ++ +L+ G K
Sbjct: 364 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL 423
Query: 230 ---------------------EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
++ E+ +L+ M ++ V +N I +LC+L
Sbjct: 424 KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMD 483
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM--------SNSGLSPN 320
EA LL M + G++P VTY+ + GF + G E A + + +M S + L P
Sbjct: 484 EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE 543
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + ++ +CK + + A+ +E ++ P ++V GL A + EA +LI
Sbjct: 544 QA-FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 601
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA--NMTEHAVRTF 133
+ +S I+ L +A N + L+ + +PD+ ++I++ G + TE A+
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNVD-KPDVVT-----YTIVIEGLCGTDRTEEALTLL 454
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM ++ SVG FN+++ AL D E ++ + +G++P + TY +++ F
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA-AHGLEPGMVTYTTLLEGFSR 513
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ AY + M RK+ K +++ A E+ + +
Sbjct: 514 TGRMEIAYELFEVMRRKAKKSSSA------ANLVPEQAFSAL------------------ 549
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
I LCK R+ +A A+++E+ S+ +P + G + G EEA K +S
Sbjct: 550 ----IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605
Query: 314 NSGL 317
GL
Sbjct: 606 KVGL 609
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+AN A + M E + FN ++ AL E FIE ++ G+ P +
Sbjct: 22 KANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYG-FIETMRSMGVSPTI 80
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC+ A IL EM + +PN ++ + G K K +D + +
Sbjct: 81 VTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRA 140
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M ++ V Y I LC+ K AEA +LLDEM + G P Y+ + CK
Sbjct: 141 MTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSR 200
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA K ++ M+ SG+ P+ + MV+ C+G + AL ++ + G P +
Sbjct: 201 INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNT 260
Query: 362 LVTGLAGASKVSEAKELI 379
L+ L A +VSEA L+
Sbjct: 261 LIDALNRAGRVSEAYRLL 278
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E G P+ +N ++ A C+ S+ AY + M + P ++ L+ GF
Sbjct: 32 LVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFC 91
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KEEK ++LQ M G + YN +H LCK K +A AL M K ++ +
Sbjct: 92 KEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVY 151
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y+ I G C+ G EA M NSG P Y ++ ++CKG A K
Sbjct: 152 GYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRM 211
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
G +P++ T +V G ++ +A L+ +K
Sbjct: 212 TGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + T+ ++ C+++ + A+ ++ M + PNA F ++ KE + +
Sbjct: 5 GCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ + YN+ I CK K A +L EM +G +PN VTY+ F++G
Sbjct: 65 YGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A +R M+ + + Y T++ +C+ G A E G VP
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
++++ L S+++EA +L
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKL 207
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K P +FG LV G K + D +++++M G ++N + +LCK +
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
AEA ++ M S G+ P VTY+ I GFCK+ A + + M+ G PN Y T
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ +CK G + AL + K + +L+ GL A K++EA L+
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLL 173
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 59 LEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAH 115
+E R+ ++P + +++ I+ + + + L+E+ R P+ H
Sbjct: 68 IETMRSMGVSPTI----VTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLH 123
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+ YG+ + A+ F+ M E K+R V + L+ L A E + E +
Sbjct: 124 GLCKYGK---VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS- 179
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P YN ++ C+ S + A+ + M I P+ +FG +V G+ + + +D
Sbjct: 180 GCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+LQ M+ G+ +YN I +L + + +EA LL EM+S+G+ PNS TY+
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYA 294
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ D+ Y +I C++ + AYS+L EM+ P + A+++ K + + +
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M G+ + + + C+ + +A LL +M S G+ P V Y+ I
Sbjct: 206 KLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDAL 265
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+ G EA + + M + GLSPNS Y M
Sbjct: 266 NRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V + + + LCK + +A L++ M +G PN++ ++ + CK+G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA F M + G+SP Y ++ CK AL +E +G PN T +
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
+ GL KV +A L + ++K +V + + GL Q
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQ 162
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + +EE+ R +++I Y N + E
Sbjct: 226 DVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + K + P +YG+KP++ YN ++K C
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP-SYGLKPNVVCYNTLLKGLC 343
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +LAEM K + +F LV F + + V ++L+ M +G V
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVI 403
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M + G KPN+++Y+ + G C + +A+ M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G N + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I + L
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASAL 552
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AVR +++ VG N +L A+ + + + P ++G +PD+ +YN V+
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLP-SFGCEPDVVSYNAVL 234
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C + ++ EM R + PN +F L++ + +E V++VL M +G
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ MY I +CK A +L+ M S G+KPN V Y+ + G C +EE ++
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + + + +V F C+ G + + ++ + G +P+ T +++ G
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 369 ASKVSEAKELI 379
+ EA L+
Sbjct: 415 EGLIDEAVMLL 425
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 146/373 (39%), Gaps = 69/373 (18%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I+ L F + + L ++ + R +A I + + A
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNR 322
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPK--------------------- 173
M + L+ +V +N LL L A+ ++E + + E F K
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 174 ------------TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+G PD+ TY VI FC+ A +L M KPN S+
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK---------------LRK 266
++ G E++ D ++ M + G +N I+ LCK +
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 267 CA--------------------EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
C+ EA LL+ M++KGM PN++ YS ++G +
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + + ++ + ++ +Y ++ +CK G+ E A+ F ++ G VPN +T L+ GL
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Query: 367 AGASKVSEAKELI 379
A V EA+E++
Sbjct: 623 ASEGFVKEAQEML 635
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 42/277 (15%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+NA++ A + +R+ P + P+ TY V++A C + A ++L EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 208 DRKSIKPNASSFGALV------AGFYKEEKY-ED-------------------------V 235
R+ P + ++ GF + ED V
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 236 NKVLQMME---RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+K L ++ +G + V YN + LC ++ + L++EM+ PN VT++
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I C++G FE + M+ G +P+ +Y T++ +CK G + A + G
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
PN +L+ GL A + E +EL+ E F K+
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLA---EMFDKD 362
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 120/282 (42%), Gaps = 1/282 (0%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ + + + I + + + + A
Sbjct: 362 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEA 421
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V K M + + ++ +L L A+ + + + + + + G + T+N +I
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLIN 480
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A +L +M P+ S+ ++ G K K ++ ++L +M GM
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+Y+ +L + + + + D + ++ ++V Y+ I CK G E A +F
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
M +SG PN S Y ++ + G + A E +KG
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 8/300 (2%)
Query: 104 RPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+PD+ A++ ++ G +AN E A M V N ++
Sbjct: 41 KPDV-----FAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKI 95
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+VF E K KP L TY +I+A+ A +L EM + ++P+ ++
Sbjct: 96 DLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNV 155
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+ G KE K + + ++ + G K V YN+ + +L K E + + E+ S+G
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+PN VTYS I C+DG EE+ ++M GL+P++ Y ++ C+ G + A+
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
F I G++P+ +++ L A E+ G + E NV ++N + + L
Sbjct: 276 EFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 11/309 (3%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ L++ +P L + IL G + A++ EM L +N + L
Sbjct: 104 ELLKDNNCKPTLITYTILIEAYILEGG---IDEALKLLDEMLSRGLEPDTFTYNVITRGL 160
Query: 156 TIAKDYKEVKRVFIEFPKTY---GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
K+ K V R F EF +T G KPD+ TYN +++A ++E+ +
Sbjct: 161 --CKEGK-VDRAF-EFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+PN ++ L++ ++ K E+ ++++M+ G+ Y+ I + C+ K A
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIE 276
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
LD M+ G P+ V Y+ + CK+GN + A + + + G PN S Y TM+ +
Sbjct: 277 FLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALW 336
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVD 391
GD ALG + ++KG P+ T SL++ L V EA L+ ++ +F N+
Sbjct: 337 SSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIV 396
Query: 392 TWNEIEAGL 400
++ + GL
Sbjct: 397 SYKTVLLGL 405
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 1/228 (0%)
Query: 152 LLALTIAKDYKEVKRV-FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
+L ++ +D K + V ++ K G+ PD Y+ +I AFC A L M
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
P+ ++ ++A K + ++ ++ G VS YN + +L A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
++ +MLSKG+ P+ +TY+ I C+DG +EA M + PN Y T++
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+CK + A+ I G PN TT L+ G+ + ++A EL
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 7/292 (2%)
Query: 96 QYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
+ L+E+ +R PD + G+ + VRT ++ + V +N LL
Sbjct: 136 KLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRT---LNSRGCKPDVITYNILL 192
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
AL + E ++ E + G +P++ TY+ +I + C + +++ M K +
Sbjct: 193 RALLNQGKWDEGEKWMSEI-FSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGL 251
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
P+A + L+A F +E K + + L M G + YN + +LCK A
Sbjct: 252 TPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVE 311
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ ++ G PN +Y+ + G+ A M + G+ P+ Y +++ +C
Sbjct: 312 IFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLC 371
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+ G + A+G + ++ + PN + K+++ GL A ++ +A E++ + E
Sbjct: 372 RDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIE 423
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K +P+ L+ GF+ + +V+ ++E++G K V YN I CK +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA-KKFYRIMSNSGLSPNSSVYF 325
AK +LD M KG P+ VT++ I FC G + A K F ++ ++ P Y
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
++ G + AL E +++G P+ T + GL KV A E + + +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 386 FTK-NVDTWN 394
K +V T+N
Sbjct: 180 GCKPDVITYN 189
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 163/368 (44%), Gaps = 19/368 (5%)
Query: 46 LTLLKSESNPE------KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLE 99
L L+KSE + ++L R A P+ L L +A S ++ + L
Sbjct: 17 LELIKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLAT---SSPSHLPCLLNLLP 73
Query: 100 ELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALT 156
L+ RP A ++L + +A M + A+ F+ + + + NALL A
Sbjct: 74 RLRHRPRFSES---AALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFV 130
Query: 157 IAKDYKEVKRVFIEFPK-TYG--IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
A+ + + F +G I P+L TYN V+++ C D A ++ + R+ +
Sbjct: 131 RARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVA 190
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ ++ L+ G K+++ + +L M R G++ V YN + K + + +
Sbjct: 191 PDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRV 250
Query: 274 LDEML-SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
D+++ G +PN TY+ + G CK G F+E + + M + L P+ Y +++ +C
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT 392
+ GD + A E I G V + SLV G A +V EA + +N+ T
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRT 370
Query: 393 WNEIEAGL 400
+N + GL
Sbjct: 371 YNIMIKGL 378
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 6/293 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVR 131
D + F I+ L + + N EE R + ++S ++ G N+ AV+
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+++MD+ + + +NAL+ + R++ + G P + TYN +I
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADN-GCSPTVITYNTLIDGL 519
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C++ A S+ EM P+ +++G+L+ G + ++K +D + + + G+K V
Sbjct: 520 CKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDV 579
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
M+N+ IH LC K EA + +M K PN VTY+ + G + G ++A +
Sbjct: 580 MMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT 639
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
++ GL P+ Y T + +C + E +++G +P T LV
Sbjct: 640 SITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 145/329 (44%), Gaps = 3/329 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + I I+ L + +G ++ E+ + + + + + QA + A + +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
LR+ + +N ++ L + E ++ K PD T+ +I C+
Sbjct: 358 DSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQ 416
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ ++ A++I E + + S+ +++ G + D KV + M++ G K +
Sbjct: 417 NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHI 476
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I C++ + ++A + +M G P +TY+ I G CK ++EA R M
Sbjct: 477 YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+G +P+ + Y +++ + + AL K+ + KG + L+ GL A KV
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVD 596
Query: 374 EAKELIGLVKEK--FTKNVDTWNEIEAGL 400
EA + +KEK N+ T+N + GL
Sbjct: 597 EALHVFSDMKEKKNCPPNLVTYNTLMDGL 625
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 142/359 (39%), Gaps = 73/359 (20%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++ G A + +HA+ EM ++ V +NALL A ++++V RV+ +
Sbjct: 196 YSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLV 255
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G +P+L TYN ++ C+ + M +++P+ ++G L+ G +
Sbjct: 256 KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDV 315
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA---------------------- 270
+ +V + + G+ +MYN + C+ + EA
Sbjct: 316 DGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMI 375
Query: 271 KALLD-----------EMLSKGMK--PNSVTYSHFIYGFCKDG-------NFEEAK---- 306
K L D ++L K + P++VT+ I+G C++G FEEA+
Sbjct: 376 KGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435
Query: 307 ------------------------KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
K Y M G PNS +Y ++ C+ A+
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ G P T +L+ GL A K EA + +V+ FT ++ T+ + GL
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 37/268 (13%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
LD ++S IN L + E++ N + I + Q T AVR
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY------- 184
+ +M ++ +V +N L+ L A+ Y+E V E + G PD+ TY
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN-GFTPDITTYGSLIRGL 554
Query: 185 ----------------------------NRVIKAFCESSDSSSAYSILAEM-DRKSIKPN 215
N +I C + A + ++M ++K+ PN
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G Y+ + + + G++ + YN RI LC + E LLD
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
E+LS+G+ P +T++ + K G +
Sbjct: 675 EVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A++ ++M + + +V +N L+ AL + + V E K G P
Sbjct: 229 YCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKN-GFSP 287
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I +C+ + A + EM +K ++ A ++ +L+ F ++ + ++ +++
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLF 347
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ + G++ V MYN I+S C A ++ EM K + P+ +TY+ + GFC
Sbjct: 348 NVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLL 407
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA+ M+ G+ P+ Y T++ GD + AL E + KG+ P T
Sbjct: 408 GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTY 467
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ GL + +A+ L+ +V + T + T+ + GL
Sbjct: 468 NALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 17/255 (6%)
Query: 117 IILYGQANMTEHA--VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
++L A HA +R + ++ + V + + LL +L A F F
Sbjct: 55 LLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAP-------AFALFADI 107
Query: 175 YGIKPDL--DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
Y ++ L T+N +++ C + A +L +M R PNA ++ ++AGF +
Sbjct: 108 YRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRV 163
Query: 233 EDVNKVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-MKPNSVTYS 290
+ +V+ +M ER G+ Y I CK+ + +A + DEML+KG + P++V Y+
Sbjct: 164 QAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYN 223
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+C G + A ++ M G++ + Y +++ + A +E
Sbjct: 224 ALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKN 283
Query: 351 GWVPNFTTMKSLVTG 365
G+ P+ T L+ G
Sbjct: 284 GFSPDVFTYNILING 298
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ +N+ + LC K A LL +M +PN+VTY+ I GFC G + A + R
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 312 M-SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGA 369
M G++P+ Y T++ CK G E A+ E + KG V P+ +L+ G
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232
Query: 370 SKVSEAKELI-GLVKEKFTKNVDTWN 394
K+ A + +V+ V T+N
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYN 258
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK---SIKPNASSFGALV 223
VF P+ G PD+ +YN +IK C S A +L M + PN S+ ++
Sbjct: 152 VFRRMPE-LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF+KE + + + M G V Y+ I LCK + +A+A+L M KG+
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN+ TY+ I G+C G EEA + + MS SGL P+ Y ++ + CK G A
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ KG PN T L+ G A + + ++L+ L+
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 37/253 (14%)
Query: 163 EVKRVFIEFPKTYG--IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
EV + + F + G PD+ TY+ +I C++ + A +IL M K + PN ++
Sbjct: 218 EVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYN 277
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ G+ + E+ ++L+ M G++ V Y + I CK+ +CAEA+++ D M+ K
Sbjct: 278 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRK 337
Query: 281 GMKPNSVTYSHFIYG-----------------------------------FCKDGNFEEA 305
G KPNS Y ++G + K G ++A
Sbjct: 338 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 397
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M +GL P+ Y T+++ +CK G E A+ + +++G PN + SL+ G
Sbjct: 398 MTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHG 457
Query: 366 LAGASKVSEAKEL 378
L + + +EL
Sbjct: 458 LCSIGEWKKVEEL 470
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 141/327 (43%), Gaps = 37/327 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S I+ L +A N L+ + + + N R + I Y E AVR
Sbjct: 237 DVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLL 296
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K+M G++PD+ TY +I+ +C+
Sbjct: 297 KKMSGS------------------------------------GLQPDVVTYILLIQYYCK 320
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A S+ M RK KPN++ + L+ G+ + DV +L +M R G+
Sbjct: 321 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 380
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ I + K +A EM G++P+ V+YS I+ CK G E+A + M
Sbjct: 381 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMV 440
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GLSPN + ++++ +C G+++ E I +G P+ M +++ L +V
Sbjct: 441 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 500
Query: 374 EAKELIGLVKEKFTK-NVDTWNEIEAG 399
EA++ +V K NV ++N + G
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDG 527
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 8/291 (2%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVG----AFNALLLALTIAKDYKEVKRVFIE 170
+ I+L+G A T+ A+ +++ + +R + AFN L+ A + F E
Sbjct: 346 YHILLHGYA--TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE 403
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G++PD+ +Y+ VI C+ A +M + + PN SF +L+ G
Sbjct: 404 MRQN-GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG 462
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+++ V ++ M G+ N + +LCK + EA+ D ++ G+KPN V+Y+
Sbjct: 463 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYN 522
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+C G +E+ K + M + GL P+S Y ++ K G E AL +E K
Sbjct: 523 TLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK 582
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T ++ GL A ++ A+EL + +V ++T+N + GL
Sbjct: 583 DVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 633
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYS-ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T N++IK C+ + A + M P+ S+ AL+ G E+K ++ ++L
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190
Query: 242 MER---YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M Y V Y+ I K + +A L DEM+ +G P+ VTYS I G CK
Sbjct: 191 MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+A+ + M + G+ PN+ Y M+ C G E A+ K+ G P+ T
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 310
Query: 359 MKSLVTGLAGASKVSEAKEL 378
L+ + +EA+ +
Sbjct: 311 YILLIQYYCKIGRCAEARSV 330
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 128/303 (42%), Gaps = 10/303 (3%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RPD+ + H + G+ E AV F +M L ++ +F +L+ L ++K+
Sbjct: 410 RPDVVSYSTVIHILCKIGR---VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKK 466
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
V+ + E GI PD N ++ C+ A + +KPN S+ L+
Sbjct: 467 VEELAFEMINR-GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G+ K ++ K M G++ YN ++ K + +A AL EM K +K
Sbjct: 526 DGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
++T + ++G + G A++ Y M + G Y T++ +C+ + AL
Sbjct: 586 FCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 645
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIE 397
++ +K + + T ++ L ++ EAK L G V T ++ + IE
Sbjct: 646 FEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIE 705
Query: 398 AGL 400
GL
Sbjct: 706 EGL 708
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE---- 229
+ G++PD TYN ++ + ++ A ++ EM RK +K A + ++ G ++
Sbjct: 546 SIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIV 605
Query: 230 ------------------EKYEDV----------NKVLQMMERYGMKS---GVSMYNVRI 258
E Y V ++ L+M E K V +N+ I
Sbjct: 606 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVI 665
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
++L K+ + EAK+L M+ +G P+ +TYS I ++G EE+ + M +G +
Sbjct: 666 NALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCA 725
Query: 319 PNSSVYFTMVYFMCKGGDYETA 340
+S + ++ + + GD A
Sbjct: 726 ADSHMLNVIIRRLLEKGDVRRA 747
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 169/420 (40%), Gaps = 39/420 (9%)
Query: 15 SQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLL---KSESNPEKILEICRAAALTPES 71
SQ++H + S + P S + R + L KS +P+ L +
Sbjct: 351 SQQYHTFRPKRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLFNQYQQMGFK 410
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D ++S + KL+ + F + L+ L+ E I YG++ M E A+
Sbjct: 411 H-DYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAIE 469
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI---------------------- 169
F+ M ++ +FN LL L + + +F
Sbjct: 470 LFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWL 529
Query: 170 ---EFPKTYGI---------KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E+ K + + KP + T+N +I C D A +L +M +K +PNA
Sbjct: 530 GKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRHRPNAV 589
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G KY++ K++ M+ G K + + V + L + + + K LL EM
Sbjct: 590 TYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEM 649
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ KP+ VTY+ I CK+G EA K M G PN++ Y MV C+ D+
Sbjct: 650 KRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDF 709
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
E L + G P + LV GL K+ A ++ + K K +++ W +
Sbjct: 710 EGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEAL 769
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + + V +N L+ L E +V +E + G +P+ TY ++ FC+
Sbjct: 648 EMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEM-QVGGCEPNAATYRMMVDGFCQV 706
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D +L+ M P SF LV G K K + VL+ ME+ M+ + +
Sbjct: 707 EDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAW 766
Query: 255 NVRIHSLC 262
+ C
Sbjct: 767 EALVKDAC 774
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 1/257 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E F+E+ L V +++ L+ L K+ ++F E K G+ D
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM-KEQGLHLDT 621
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN VI FC+S + AY +L EM K ++P ++G+++ G K ++ ++ + +
Sbjct: 622 RAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 681
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ + V +Y+ I K+ + EA +L+E++ KG+ PN+ T++ + K
Sbjct: 682 AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEE 741
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA ++ M N PN Y MV +CK + A F +E +G PN T +
Sbjct: 742 IDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTT 801
Query: 362 LVTGLAGASKVSEAKEL 378
+++GLA V EAK+L
Sbjct: 802 MISGLARVGNVLEAKDL 818
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 11/283 (3%)
Query: 98 LEELKTR---PDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
EE+K + PD++ ++SI+++G + ++ + F EM E L A+N ++
Sbjct: 574 FEEIKAQGLTPDVR-----SYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVI 628
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
+ + ++ E KT G++P + TY VI + AY + E K++
Sbjct: 629 DGFCKSGKVNKAYQLLEEM-KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAV 687
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
N + +L+ GF K + ++ +L+ + + G+ +N + +L K + EA
Sbjct: 688 DLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALV 747
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
M + PN VTYS + G CK F +A F++ M GL PN+ Y TM+ +
Sbjct: 748 CFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLA 807
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ G+ A + + G +P+ +++ GL+ A+K +A
Sbjct: 808 RVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDA 850
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 147/328 (44%), Gaps = 3/328 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +++ I+ + + ++ ELK++ + ++ I + +A + AV F
Sbjct: 271 DLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELF 330
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+E+D +K V A+N +++ + E + +E K G P + YN ++
Sbjct: 331 EELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL-LERQKRKGCIPSVIAYNCILTCLGR 389
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A IL M + PN +S+ L+ K + E KV M+ G+ +
Sbjct: 390 KGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIIT 448
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
N+ I LCK ++ EA ++ + K P+SVT+ I G + G +A Y M
Sbjct: 449 VNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML 508
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+SG +PN+ VY +++ K G E KE + +G P+ + + + + A ++
Sbjct: 509 DSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIE 568
Query: 374 EAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ + L +K + T +V +++ + GL
Sbjct: 569 KGRALFEEIKAQGLTPDVRSYSILIHGL 596
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 9/273 (3%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
+ E +A LTP D ++SI I+ L + + + E+K + + R A++I
Sbjct: 573 LFEEIKAQGLTP----DVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTR--AYNI 626
Query: 118 ILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++ G ++ A + +EM L+ +V + +++ L E +F E K+
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF-EEAKSK 685
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
+ ++ Y+ +I F + AY IL E+ +K + PN ++ L+ K E+ ++
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
Q M+ Y++ ++ LCK+RK +A EM +G+KPN++TY+ I G
Sbjct: 746 LVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISG 805
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ GN EAK + +SG P+S+ Y M+
Sbjct: 806 LARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 1/269 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + +A E A++ M E L ++ N ++ L A+ E +F+
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV- 476
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD T+ +I + AY + +M PNA + +L+ F+K + ED +
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M G + + N + + K + + +AL +E+ ++G+ P+ +YS I+G
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G ++ K + M GL ++ Y ++ CK G A +E KG P
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T S++ GLA ++ EA L K K
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSK 685
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL N + ++ + ++ E+ + + P+ S+ L+ G K +D
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDT 605
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M+ G+ YN+ I CK K +A LL+EM +KG++P VTY I G
Sbjct: 606 YKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG 665
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K +EA + + + N VY +++ K G + A +E + KG PN
Sbjct: 666 LAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 725
Query: 356 FTTMKSLVTGLAGASKVSEA 375
T L+ L A ++ EA
Sbjct: 726 TYTWNCLLDALVKAEEIDEA 745
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
IE + + +P Y +I A + ++ ++L +M + F L+ F +
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E + + +L M+ + + +YNV I K+ K A E+ S+G+ P+ VT
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I CK +EA + + + ++ P Y TM+ G + A +
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQK 369
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
KG +P+ ++T L KV EA ++ +K N+ ++N
Sbjct: 370 RKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYN 415
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK---SIKPNASSFGALV 223
VF P+ G PD+ +YN +IK C S A +L M + PN S+ ++
Sbjct: 149 VFRRMPE-LGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVI 207
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF+KE + + + M G+ V YN I LCK + +A A+L M KG+
Sbjct: 208 DGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVM 267
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P++ TY+ I G+C G EEA + + MS SGL P+ Y ++ + CK G A
Sbjct: 268 PDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+ KG PN T L+ G A + + ++L+ L+
Sbjct: 328 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 137/330 (41%), Gaps = 73/330 (22%)
Query: 122 QANMTEHAV-RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI----------- 169
N T+ A+ F+ M E V ++NAL+ L + K +E + I
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS 197
Query: 170 -----------------EFPKTY---------GIKPDLDTYNRVIKAFCESSDSSSAYSI 203
E K Y G+ PD+ TYN +I C++ A +I
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L M K + P+ ++ ++ G+ + E+ ++L+ M G++ V Y++ I CK
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG---------------------------- 295
+ +CAEA+++ D M+ KG KPNS Y ++G
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377
Query: 296 -------FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
+ K G ++A + M +GL P+ Y T+++ +CK G E A+ + +
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++G PN + SL+ GL + + +EL
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEEL 467
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 2/279 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + AV + M + + +N ++ +E R+ + + G++PD+
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS-GLQPDV 305
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ +I+ +C+ + A S+ M RK KPN++ + L+ G+ + DV +L +
Sbjct: 306 VTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL 365
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G+ +N+ I + K +A EM G++P+ V+YS I+ CK G
Sbjct: 366 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGR 425
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E+A + M + GLSPN + ++++ +C G+++ E I +G P+ M +
Sbjct: 426 VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT 485
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
++ L +V EA++ +V K +V ++N + G
Sbjct: 486 IMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDG 524
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVG----AFNALLLALTIAKDYKEVKRVFIE 170
+ I+L+G A T+ A+ +++ + +R + AFN L+ A + F E
Sbjct: 343 YHILLHGYA--TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE 400
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G++PD+ +Y+ VI C++ A +M + + PN SF +L+ G
Sbjct: 401 MRQN-GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG 459
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+++ V ++ M G+ N + +LCK + EA+ D ++ G+KP+ V+Y+
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYN 519
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G+C G +E+ K M + GL P+S Y +++ K G E AL +E K
Sbjct: 520 TLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T ++ GL A ++ A+EL + +V ++T+N + GL
Sbjct: 580 DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 630
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 4/200 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYS-ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T N++IK C+ + + A + M P+ S+ AL+ G E+K ++ ++L
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 242 MER---YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M Y V YN I K + +A L EM+ +G+ P+ VTY+ I G CK
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
++A + M + G+ P++ Y M+ C G E A+ K+ G P+ T
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 359 MKSLVTGLAGASKVSEAKEL 378
L+ + +EA+ +
Sbjct: 308 YSLLIQYYCKIGRCAEARSV 327
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 10/303 (3%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RPD+ + H + G+ E AV F +M L ++ +F +L+ L ++K+
Sbjct: 407 RPDVVSYSTVIHILCKTGR---VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKK 463
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
V+ + E GI PD N ++ C+ A + +KP+ S+ L+
Sbjct: 464 VEELAFEMINR-GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G+ K ++ K L M G++ YN ++ K + +A AL EM K +K
Sbjct: 523 DGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVK 582
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
++T + ++G + G A++ Y M + G Y T++ +C+ + AL
Sbjct: 583 FCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 642
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIE 397
++ +K + + T ++ L ++ EAK L G V + T ++ + IE
Sbjct: 643 FEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIE 702
Query: 398 AGL 400
GL
Sbjct: 703 EGL 705
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE---- 229
+ G++PD TYN ++ + ++ A ++ EM RK +K A + ++ G ++
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 230 ------------------EKYEDV----------NKVLQMMERYGMKS---GVSMYNVRI 258
E Y V ++ L+M E K V +++ I
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVI 662
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
++L K+ + EAK+L M+ +G P+ +TYS I ++G EE+ + M +G +
Sbjct: 663 NALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCA 722
Query: 319 PNSSVYFTMVYFMCKGGDYETA 340
+S + +V + + GD A
Sbjct: 723 ADSHMLNIIVRRLLEKGDVRRA 744
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ R ++++ H ++ V +N ++ +L K + V+ E GI PD+ TY
Sbjct: 178 TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM-IVKGISPDVVTYT 236
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A+S+L EM K+I PN +F L+ KE K ++ +L +M +
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+K V YN I + + AK + M +G+ P+ Y++ I G CK +EA
Sbjct: 297 CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEA 356
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M + + P+ Y +++ +CK E A+ CK +G P+ + L+ G
Sbjct: 357 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDG 416
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTW 393
L + ++ +AKE+ L+ + + NV +
Sbjct: 417 LCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 7/310 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEH 128
LD++++ IN L + +++ L +L+ +PD+ +S+ + +
Sbjct: 159 QLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLC---KNKLLGD 215
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + EM + V + L+ I KE + E K I P++ T+N +I
Sbjct: 216 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM-KLKNINPNVCTFNILI 274
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A + A +LA M + IKP+ ++ +L+ G++ ++ + V M + G+
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y I+ LCK + EA +L +EM K M P+ VTY+ I G CK+ + E A
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M G+ P+ Y ++ +CK G E A + +AKG+ N L+ L
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454
Query: 369 ASKVSEAKEL 378
A EA +L
Sbjct: 455 AGFFDEALDL 464
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 19/323 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ IN L + E+ + PD+ H + G H
Sbjct: 196 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMG------HLK 249
Query: 131 RTFKEMDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
F ++E KL++ +V FN L+ AL+ KE K + K IKPD+ TYN +
Sbjct: 250 EAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA-CIKPDVFTYNSL 308
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I + + A + M ++ + P+ + ++ G K + ++ + + M+ M
Sbjct: 309 IDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM 368
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ YN I LCK A AL M +G++P+ +Y+ + G CK G E+AK+
Sbjct: 369 IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKE 428
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
++ + G N Y ++ +CK G ++ AL + KG +P+ T ++ L
Sbjct: 429 IFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALF 488
Query: 368 GASKVSEAKELI------GLVKE 384
+ +A++++ GL+KE
Sbjct: 489 EKDENDKAEKILREMIARGLLKE 511
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV +F M + FN +L +L K Y V +F +F + GI PDL T + +I
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQF-EPNGITPDLCTLSILI 99
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC + + A+S+ A + ++ PNA + L+ G + + + G +
Sbjct: 100 NCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQ 159
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y I+ LCK + LL ++ +KP+ V Y+ I CK+ +A
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 219
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
Y M G+SP+ Y T+++ C G + A E K PN T L+ L+
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
K+ EAK L+ ++ + K +V T+N + G
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + AV F EMD+ + + AL+ L A+ +E + + K G +P
Sbjct: 235 EAGRIDEAVELFGEMDQPDMH----MYAALVKGLCNAERGEE-GLLMLRRMKELGWRPST 289
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y V+ C + A +L EM K + P + A++ + KE + D +VL++
Sbjct: 290 RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 349
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ G K V YN + C K +A LL++M + G+ P++VTY+ I G C DG+
Sbjct: 350 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 409
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E A + R+M GL + Y ++ +CK G + A +G PN T S
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469
Query: 362 LVTGLAGASKVSEAKELI 379
L+ GL + K A + +
Sbjct: 470 LINGLCKSGKADIAWKFL 487
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 4/258 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
++EL RP + R +A + + + A +EM E L V A++ A
Sbjct: 280 MKELGWRP---STRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCK 336
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ RV +E K G KP++ TYN +++ FC A ++L +M + P+A
Sbjct: 337 EGRMSDALRV-LELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 395
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G + E ++L++ME G+ + YN I++LCK + +A +L D +
Sbjct: 396 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 455
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
++G+KPN+VT++ I G CK G + A KF M ++G +P++ Y + + +CK
Sbjct: 456 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 515
Query: 338 ETALGFCKESIAKGWVPN 355
+ L F E + K P+
Sbjct: 516 QEGLSFIGEMLQKDVKPS 533
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 14/320 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVR 131
D ++++ I L EA + + E+ +PD+ H ++ ++ G N E +
Sbjct: 222 DVVSYATLIEGLCEAGRIDEAVELFGEMD-QPDM-----HMYAALVKGLCNAERGEEGLL 275
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKA 190
+ M E R S A+ A++ + KE + + E F K G+ P + T VI A
Sbjct: 276 MLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEK--GLAPCVVTCTAVINA 333
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C+ S A +L M + KPN ++ ALV GF E K +L M G+
Sbjct: 334 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 393
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I C A LL M G+ + TY+ I CKDG ++A +
Sbjct: 394 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 453
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ G+ PN+ + +++ +CK G + A F ++ ++ G P+ T S + L
Sbjct: 454 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC--- 510
Query: 371 KVSEAKELIGLVKEKFTKNV 390
K+ ++E + + E K+V
Sbjct: 511 KMKGSQEGLSFIGEMLQKDV 530
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
R+F + P TYN VI++ C +D + A L+ M R +P+A +F +L+ G
Sbjct: 138 RLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVG 197
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + + + + M G V Y I LC+ + EA L EM +P+
Sbjct: 198 YCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPD 253
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
Y+ + G C EE R M G P++ Y +V F C+ + A +
Sbjct: 254 MHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQ 313
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
E KG P T +++ ++S+A ++ L+K + K NV T+N + G
Sbjct: 314 EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 368
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D TYN +I A C+ + A S+ ++ + IKPNA +F +L+ G K K +
Sbjct: 424 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 483
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K L+ M G Y+ I LCK++ E + + EML K +KP++V Y+ I+
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 543
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+ N+ + + M +SG +P+ Y T + C G A E G +
Sbjct: 544 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 603
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
+L+ G A + A ++
Sbjct: 604 TMAYNTLMDGHASIGQTDHAVSIL 627
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 21/305 (6%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+++++ GQ E A R + M+ L +NAL+ AL + +F
Sbjct: 397 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL- 455
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+T GIKP+ T+N +I C+S + A+ L +M P+ ++ + + K +
Sbjct: 456 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 515
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ + M + +K Y + IH L K R EM+S G P+ VTY+
Sbjct: 516 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTS 575
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ +C +G EA+ MS +G++ ++ Y T++ G + A+ K+ +
Sbjct: 576 MRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 635
Query: 353 VPN----FTTMKSLV----------TGLAGASKVSEAKELIGLV----KEKFTKNVDTWN 394
VPN F ++ LV AG K E ++ GL K +F N T++
Sbjct: 636 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 695
Query: 395 EIEAG 399
I G
Sbjct: 696 SILEG 700
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 19/284 (6%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + ++ S + ++ L ++Y V R + E + G PD+ TY ++A+C
Sbjct: 524 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS-GCNPDVVTYTTSMRAYCIE 582
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A ++L EM + + + ++ L+ G + + +L+ M Y
Sbjct: 583 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 642
Query: 255 NVRIHSLCKLR-----------------KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ + L ++R + + L D M PNS TYS + GF
Sbjct: 643 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 702
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+DG EEA +M +S N +Y +V CK Y A I G++P
Sbjct: 703 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 762
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ + L++GL + +AKE+ + K ++ + W I GL
Sbjct: 763 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 806
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/277 (17%), Positives = 115/277 (41%), Gaps = 22/277 (7%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
++I I+KL + + +++ E+ + PD+ + + G+ N E+
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN---VLM 593
Query: 135 EMDEHKLRHSVGAFNALL----------LALTIAKDYKEVKRV------FIEFPKTYGIK 178
EM ++ + A+N L+ A++I K V V FI ++
Sbjct: 594 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D ++ + + + + M + PN+ ++ +++ GF ++ + E+ +
Sbjct: 654 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 713
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ +M+ + +Y + CK ++ +A L+ M+ G P ++Y H + G
Sbjct: 714 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLIC 773
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+G ++AK+ + SP+ V+ ++ + K G
Sbjct: 774 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 810
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHK-----------LRHSVGA-FNALLLALTIAK 159
A++ ++ G A++ T+HAV K+M LRH V +L LT A
Sbjct: 606 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 665
Query: 160 DYK--EVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+K E+ VF + K P+ TY+ +++ F E + A S+++ M SI N
Sbjct: 666 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 725
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ALV F K ++Y D ++ M ++G + Y + L + +AK +
Sbjct: 726 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 785
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K P+ + + I G K G+ + +++ ++ P+ Y
Sbjct: 786 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 834
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 5/280 (1%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
+RF I Y +A + + +++ F+ M + SV FN+L+ L K V+
Sbjct: 148 DRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYD 207
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E TYG+ PD TYN +I+ FC++S + EM+ + + ++ LV G +
Sbjct: 208 EMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRA 267
Query: 230 EKYEDVNKVLQMMERY--GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K ++ M + G+ V Y I C ++ EA +L+EM S+G+KPN +
Sbjct: 268 GKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMI 327
Query: 288 TYSHFIYGFCKDGNFEEAKKFY-RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
TY+ + G C+ ++ K R+ S+ G SP++ + T+++ C G+ + AL E
Sbjct: 328 TYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVF-E 386
Query: 347 SIAKGWVP-NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
S+ K +P + + +L+ L A++L + EK
Sbjct: 387 SMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEK 426
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF---IEFPKTYGIKPDLDTYN 185
A+R FK + H+ ++ +L L ++ V R F IE +K + +N
Sbjct: 94 ALRFFKWTQQKGFSHTPESYFIMLEILGRERNLN-VARNFLFSIEKHSKGTVKLEDRFFN 152
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMER 244
+I+++ E+ + + M ++ P+ +F +L++ K + +V +M+
Sbjct: 153 SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 212
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
YG+ YNV I CK E EM S + VTY+ + G C+ G
Sbjct: 213 YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRI 272
Query: 305 AKKFYRIMSN--SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
A+ M GL+PN Y T++ C + E AL +E ++G PN T +L
Sbjct: 273 ARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTL 332
Query: 363 VTGLAGASKVSEAKELIGLVKEK--FTKNVDTWNEI 396
V GL A K+ + K+++ +K F+ + T+N I
Sbjct: 333 VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTI 368
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y E A+ +EM L+ ++ +N L+ L A ++K V G P
Sbjct: 301 YCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSP 360
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T+N +I C + + A + M + I +++S+ L+ ++ Y+ ++
Sbjct: 361 DTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLF 420
Query: 240 Q-------MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ ++G K + YN SLC+ K +A+ ++ +++ +G + + +Y+
Sbjct: 421 DELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTV 479
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
I G CK+G +E + M P+ +Y
Sbjct: 480 IMGHCKEGAYESGYELLMWMLRRDFLPDIEIY 511
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 146/392 (37%), Gaps = 79/392 (20%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
+LE + L P + + ++ + L EA+ + + LE +K+ + F ++I
Sbjct: 313 VLEEMTSRGLKP----NMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTI 368
Query: 118 I-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPK-- 173
I L+ A + A++ F+ M + ++ +++ L+ +L DY +++F E F K
Sbjct: 369 IHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEI 428
Query: 174 ---TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+G KP +YN + ++ CE + A ++ ++ ++ + + S+ ++ G KE
Sbjct: 429 LLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEG 487
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRI-------------------------------H 259
YE ++L M R + +Y+ I H
Sbjct: 488 AYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWH 547
Query: 260 S-LCKL--RKCA-EAKALLDEMLSKGMKPN---SVTYSHFIYG----------------- 295
S L KL + CA E+ ++ ML K ++ N S ++G
Sbjct: 548 SVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKN 607
Query: 296 ------------FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
K G EA K + + + + + +CK A
Sbjct: 608 GYYVKIEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSL 667
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
C E + G T + L+ L K EA
Sbjct: 668 CYELVENGLHQELTCLDDLIAALEEGGKREEA 699
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+ + L+E RP + + + I LY + A+ KEM+ H ++H+ ++ L+
Sbjct: 415 VFERLKECGFRPSIIS---YGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLIN 471
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
D+ +F + K+ G++PD YN +++AFC+ + A I M ++ ++
Sbjct: 472 GFIHLHDFANAFSIFEDMIKS-GLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQ 530
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ +F ++ GF + L +M R G V YN IH L + + A ++
Sbjct: 531 PSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSV 590
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
LD+M G+ PN TY+ + G+ G+ +A +++ + SGL + +Y T++ CK
Sbjct: 591 LDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCK 650
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G ++AL +E + N L+ G A V EA +L+ +KE
Sbjct: 651 SGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKE 701
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 142/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I + N + +E KT+ D N +++ I + Q+ + A +E
Sbjct: 324 VTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE 383
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + +++++ T+A+D K+ VF E K G +P + +Y +I + +
Sbjct: 384 MEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVF-ERLKECGFRPSIISYGCLINLYVKIG 442
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ EM+ IK N ++ L+ GF + + + + M + G++ ++YN
Sbjct: 443 KVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYN 502
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + + CK+ A + + M + M+P++ T+ I GF G+ + A +M S
Sbjct: 503 LLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRS 562
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G +P Y +++ + + E A+ + G PN T ++ G A + + +A
Sbjct: 563 GCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKA 622
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 623 FEYFTKIKE 631
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 2/248 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
NM + A+R F+ M + +++ S F ++ +A D K ++ + G P +
Sbjct: 512 GNM-DRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDT-LDLMRRSGCAPTVM 569
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I A S+L +M I PN ++ ++ G+ + +
Sbjct: 570 TYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKI 629
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G+K V +Y + + CK + A A+ EM + + N+ Y+ I G+ + G+
Sbjct: 630 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 689
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EA + M G+ PN + + + CK GD + A +E G PN T +L
Sbjct: 690 WEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTL 749
Query: 363 VTGLAGAS 370
+ G A S
Sbjct: 750 IKGWAKVS 757
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 14/355 (3%)
Query: 52 ESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNER 111
ES PE + A P+ R F + + ++ + E ++ R N
Sbjct: 232 ESRPEDWQAVVSAFERIPKP--SRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAF 289
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+ Y A A+ +EM L +V ++ L+ D + ++F E
Sbjct: 290 VFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKE- 348
Query: 172 PKTYGIKPDLDT-----YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
K LD Y+ +I A C+S + A ++ EM+ I + +++ G+
Sbjct: 349 -----AKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGY 403
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + V + ++ G + + Y I+ K+ K +A A+ EM S G+K N+
Sbjct: 404 TVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNN 463
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
TYS I GF +F A + M SGL P+ ++Y +V CK G+ + A+ +
Sbjct: 464 KTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFER 523
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ P+ T + ++ G A A + A + + L++ V T+N + GL
Sbjct: 524 MKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGL 578
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
H ++II+ G A + A F ++ E L+ V + LL A + + V
Sbjct: 604 HTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTRE 663
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F + P+ I YN +I + D A ++ +M I PN +F + +
Sbjct: 664 MSFQKIPRNTFI------YNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINA 717
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + V+Q M G+K V + I K+ A +EM S G+KP+
Sbjct: 718 CCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPD 777
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + E + I+S
Sbjct: 778 EAAYHCLVTSLLSRATVMEGSTYTGILS 805
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEM+ G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K + ++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 86/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ ++P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + I I+ + L+++ R N + + L A+
Sbjct: 293 DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVV 352
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M HK+ + +L D +R F E + G+ D TY +I C
Sbjct: 353 EDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK-GLATDGVTYTTLINGLCR 411
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A +L EM + + + ++ LV G+ K K + +V M + G+ V
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y LCK A LL EM +KG++ N+ TY+ I G CK G ++A + M
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMD 531
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+GL P+ Y T++ +CK G+ + A +E + G P T L+ G + +V
Sbjct: 532 AAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVE 591
Query: 374 EAKELIGLVKEK-FTKNVDTWNEI 396
K+L+ + EK N T+N +
Sbjct: 592 GGKKLLEWMLEKNIHPNATTYNSL 615
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 141/322 (43%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN L A + L+E+ R +E + + Y + A +
Sbjct: 398 DGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVH 457
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + + +V + AL L D + + E G++ + TYN +I C+
Sbjct: 458 NTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM-SNKGLELNACTYNSLINGLCK 516
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +A+MD +KP+ ++ L+ K + + + +LQ M G+K +
Sbjct: 517 AGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVT 576
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV ++ C + K LL+ ML K + PN+ TY+ + +C N + + Y+ M
Sbjct: 577 YNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMC 636
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ + PN + Y ++ CK + A F E I KG+ ++ +L+ L K
Sbjct: 637 SRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFV 696
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
EA++L + KE FT D +N
Sbjct: 697 EARKLFHDMRKEGFTAEPDVYN 718
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 5/258 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V ++N LL L A ++ +++F E PD+ TY +I +C + +A +
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS----PPDVVTYGILIHGYCALGELENAVKL 316
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M + ++PNA+ + ++VA + + D V++ M + + ++Y + C
Sbjct: 317 LDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
A+ DEM KG+ + VTY+ I G C+ G +EA+K + M L +
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +V CK G A + +G PN T +L GL V A EL+ +
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496
Query: 384 EK-FTKNVDTWNEIEAGL 400
K N T+N + GL
Sbjct: 497 NKGLELNACTYNSLINGL 514
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A+RT +MD L+ V + L+ AL + + + E GIKP +
Sbjct: 516 KAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN-GIKPTI 574
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ FC S +L M K+I PNA+++ +L+ + + ++ +
Sbjct: 575 VTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKG 634
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M ++ + YN+ I CK R EA+ +EM+ KG + + +YS I K
Sbjct: 635 MCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKK 694
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
F EA+K + M G + VY + F + E L C E + V
Sbjct: 695 FVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIV 746
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 2/279 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + + A F++M + ++ G +N L+ +KEV ++ E T+G++PD
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM-STHGLEPDC 266
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY ++ C++ A M RK IKP+ + + L+ G+ + +++ L +
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ ++N+ + K EA + ++M +G+ P+ V++ I CK G
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A + M N G++PN V+ ++VY +C G +E A E + +G + +
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 362 LVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
L+ L +V EA+ LI L ++ NV ++N + AG
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAG 485
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E V A+N ++ ++ +F+E GI P++ TY VI C++
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ-GIPPNVVTYTTVIDGLCKAQ 210
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + +M + +KP+ ++ L+ G+ K+++V ++L+ M +G++ Y
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + LCK +C EA+ D M KG+KP+ Y+ ++G+ G E F +M +
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+SPN ++ M K E A+ + +G P+ + +L+ L +V +A
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA 390
Query: 376 K-ELIGLVKEKFTKNVDTWNEIEAGL 400
+ ++ E T N+ ++ + GL
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGL 416
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 2/254 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN + A +E +F + + G+ PD+ ++ +I A C+ A +M
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKM-RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQM 397
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + PN F +LV G K+E ++ + G+ +N + +LC +
Sbjct: 398 INEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRV 457
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ L+D M+ G++PN ++Y+ + G C G +EA K +M ++GL PN Y +
Sbjct: 458 MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTIL 517
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKF 386
+ CK + A +E + KG P T +++ GL + SEA EL + ++ +
Sbjct: 518 LRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRT 577
Query: 387 TKNVDTWNEIEAGL 400
++ T+N I GL
Sbjct: 578 KCDIYTYNIILNGL 591
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 13/324 (4%)
Query: 76 LAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++ I+ L +A + G+ Q + + +PD H + G+ + V+
Sbjct: 197 VTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK---WKEVVQM 253
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+EM H L + ALLL R+F + GIKPD+ Y ++ +
Sbjct: 254 LEEMSTHGLEPDCITY-ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYA 312
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S +S L M + PN F + + K+ E+ + M + G+ V
Sbjct: 313 TKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVV 372
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I +LCKL + +A ++M+++G+ PN +S +YG C G +E+A++ + +
Sbjct: 373 SFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV 432
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ ++ + T++ +C G A I G PN + +LV G ++
Sbjct: 433 LDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI 492
Query: 373 SEAKELI------GLVKEKFTKNV 390
EA +L+ GL +FT +
Sbjct: 493 DEAAKLLDVMVSNGLKPNEFTYTI 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 43/298 (14%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-----TYGIKPDL 181
+ A++ F E+ SV AFN LL ++ A +RV F + + + P+
Sbjct: 31 DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90
Query: 182 DTYNRVIKAFCESSDSSSAYS------------------------------------ILA 205
TY+ +I FC ++ +L
Sbjct: 91 CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDV-NKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
M P+ ++ ++ GF++E + E N L+MM++ G+ V Y I LCK
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ-GIPPNVVTYTTVIDGLCKA 209
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ AK + +M+ +G+KP++ TY+ I+G+ G ++E + MS GL P+ Y
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
++ ++CK G A F KG P+ L+ G A +SE + L+
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 3/261 (1%)
Query: 116 SIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
S ++YG + E A F E+ + + FN L+ L E +R+ I+
Sbjct: 410 SSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL-IDLMI 468
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G++P++ +YN ++ C + A +L M +KPN ++ L+ G+ K + +
Sbjct: 469 RVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVD 528
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
D + + M G+ V+ YN +H L + + +EA L M++ K + TY+ +
Sbjct: 529 DAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIIL 588
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G CK+ +EA K +R + + +S + M+ + KGG E A+ A G V
Sbjct: 589 NGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLV 648
Query: 354 PNFTTMKSLVTGLAGASKVSE 374
P+ T + + L + E
Sbjct: 649 PDVVTYRLIAENLIEEGSLGE 669
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M +R +V ++N L+ + E ++ ++ + G+KP+ TY ++
Sbjct: 460 AQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL-LDVMVSNGLKPNEFTYTILL 518
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ +C++ AYS+ EM K + P +++ ++ G ++ ++ + N++ M K
Sbjct: 519 RGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN+ ++ LCK EA + + SK + +SVT++ I K G E+A
Sbjct: 579 CDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDL 638
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +S GL P+ Y + + + G G G PN + +LV L
Sbjct: 639 FATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLH 698
Query: 369 ASKVSEA 375
+S A
Sbjct: 699 RGDISRA 705
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 87/222 (39%), Gaps = 3/222 (1%)
Query: 115 HSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++I+L Y +A + A F+EM + V +N +L L + E +++
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ K D+ TYN ++ C+++ A+ + + K + ++ +F ++ K +
Sbjct: 574 NSR-TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRK 632
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
ED + + YG+ V Y + +L + E L M G PNS +
Sbjct: 633 EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+ G+ A + + S +S ++ +G
Sbjct: 693 VRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRG 734
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 1/233 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V FN L+ L K+ + +F E KT G++P ++N +I +C+S + + +
Sbjct: 231 NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKT-GLQPTAVSFNTLINGYCKSGNLEEGFRL 289
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M+ + P+ ++ AL+ G KE + ED N + + M G+ + I+ CK
Sbjct: 290 KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK 349
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ A + +M +KG+K + V Y+ I G CK G F EA+KF M+ GL P+
Sbjct: 350 NGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT 409
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
Y T++ CK GD E AL KE + +G + ++++GL K+ +A+
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAE 462
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 2/283 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
+Y + A++ F+ +H L+ LL + ++E + G
Sbjct: 171 VYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDS-GYP 229
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ T+N ++ C+ A I E+ + ++P A SF L+ G+ K E+ ++
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRL 289
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ME + + V Y+ I LCK + +A L EM +G+ PN VT++ I G CK
Sbjct: 290 KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK 349
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G + A + Y+ M GL + +Y T++ +CKGG + A F E +G +P+ T
Sbjct: 350 NGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT 409
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ G + A E+ +VKE + + I +GL
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 48/302 (15%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKE---VKRVFIEFPKTYGIKPDLDTYNRVIK 189
F E+ + L+ + +FN L+ + + +E +K V EF + PD+ TY+ +I
Sbjct: 255 FDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR----VFPDVFTYSALID 310
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A + EM + + PN +F L+ G K + + ++ Q M G+K+
Sbjct: 311 GLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKA 370
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF----------------- 292
+ +YN I LCK EA+ + EM +G+ P+ TY+
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMR 430
Query: 293 ------------------IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
I G C+DG +A++ R M +GL P+ Y ++ CK
Sbjct: 431 KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKK 490
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFTK 388
GD + KE + G +P T L+ GL +V A L +G+V + T
Sbjct: 491 GDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITY 550
Query: 389 NV 390
N+
Sbjct: 551 NI 552
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 38/349 (10%)
Query: 54 NPEKILEICRAAALTPESHLDRLAFSIAINKLSEA-NYFNG--ISQYLEELKTRPDLQNE 110
+ + I + R L P + ++F+ IN ++ N G + +EE + PD+
Sbjct: 250 DAQLIFDEIRKTGLQPTA----VSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDV--- 302
Query: 111 RFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALL----------LALTIA 158
+S ++ G E A FKEM + L + F L+ LAL I
Sbjct: 303 --FTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEI- 359
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+++F T G+K DL YN +I C+ A + EM ++ + P+ +
Sbjct: 360 -----YQQMF-----TKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT 409
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ L+ G KE E ++ + M + G++ + I LC+ K +A+ L EML
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+KP+ TY+ + GFCK G+ + K + M + G P Y ++ +CK G +
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE---AKELIGLVKE 384
A + G VP+ T L+ G K+ + K +GLV +
Sbjct: 530 NADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSD 578
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 180/420 (42%), Gaps = 45/420 (10%)
Query: 6 RLRTNL-NLFSQK---HHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEI 61
R RT L N+ +K L +S+ G + L + AALT K + ++
Sbjct: 72 RSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISK 131
Query: 62 CRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG 121
L P D + F+ IN SE+ + ++K R I YG
Sbjct: 132 LEKNGLKP----DSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYG 187
Query: 122 QANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
A M E ++ M E ++ + FN+L+ A K E V + + G++PD
Sbjct: 188 NAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAAS-GLQPD 246
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED------ 234
+ TYN + +A+ ++ ++S A ++ EM + PN + G ++ G+ KE K +D
Sbjct: 247 VVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLY 306
Query: 235 -----------------------------VNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
V++ L +ME +G+K V ++ +++ +
Sbjct: 307 RMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVG 366
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ + + D+M+ G++P+ +S G+ + G E+A+ M SG+ PN ++
Sbjct: 367 LMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFT 426
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T++ C G E A ++ G PN T ++L+ G A + +A+EL+ ++++K
Sbjct: 427 TIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQK 486
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 19/291 (6%)
Query: 39 KDKTRAALTLLKSESNPEKILEICR------AAALTPESHLDRLAFSIAINKLSEANYFN 92
K R +L+++ N ++I E A+ L P+ + N L+ A N
Sbjct: 209 KPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDV--------VTYNTLARAYAQN 260
Query: 93 GISQYLE----ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
G + E E++ + NER I Y + + A+R M + + ++ F
Sbjct: 261 GETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIF 320
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N+L+ D V + + +G+KPD+ T++ ++ A+ I +M
Sbjct: 321 NSLIKGFLDITDTDGVDEA-LTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMV 379
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ I+P+ +F L G+ + + E +L M + G++ V ++ I C K
Sbjct: 380 KAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKME 439
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
A + ++M G+ PN T+ I+G+ + ++A++ +IM G++P
Sbjct: 440 YASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAP 490
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L + +K V + E + G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILEC-G 119
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 120 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 180 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 239
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD A G E KG P+
Sbjct: 240 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDK 299
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 300 FTYTTLIDGCCKEGDLDAAFE 320
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 112 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 170
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ +A M
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEM 290
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD + A K I + + ++++GL +
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRP 350
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 351 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 386
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 201
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 202 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 261
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ +
Sbjct: 262 PDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEH 321
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 322 RKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 381
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G VP+ T L+ G
Sbjct: 382 KGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-FGALVA--GFYKEEKYEDVNK 237
L +Y +I C S A S++ + + K +AS+ F A++ G + + Y
Sbjct: 1 LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60
Query: 238 VLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAEAKALLDEMLSKGM 282
+ +E ++ + Y + + L KLR +E+L G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
+ ++ ++ FCKDG+ A+ + ++ GL P+ Y T++ + GD +
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+A G P+ T L+ GL SK+ +A EL
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANEL 216
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 130/318 (40%), Gaps = 65/318 (20%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM+ SV FN+ + L IAK +V + +E G+ P+ TY +I +C+
Sbjct: 505 EMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAK-GLSPNTVTYGALIAGWCKE 563
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM------- 247
+ A + EM K +KPN LV+ FY+E K ++ N VLQ + M
Sbjct: 564 GNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAS 623
Query: 248 -------------------KSGVSMYNVRIHSLCKLRKCAEAKALL-------------- 274
+S M+N+ I LCKL + A+A+ L
Sbjct: 624 TLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFT 683
Query: 275 ---------------------DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
DEMLS + PN VTY+ IYG CK N A + +
Sbjct: 684 YSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQ 743
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ G+SPN+ Y T++ CK G+ A ++ I +G P T L+ GL +
Sbjct: 744 SKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYME 803
Query: 374 EAKELIGLVKEKFTKNVD 391
EA I L+ + NVD
Sbjct: 804 EA---IKLLDQMIENNVD 818
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 151/339 (44%), Gaps = 37/339 (10%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+N+L +A ++++ L ++ A Y + HA KEM+E L
Sbjct: 136 LNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGL 195
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
++ A++A++ EV R + + G+ P++ TY ++K +C+ A
Sbjct: 196 DVNLVAYHAVMDGYCRIGQ-TEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAE 254
Query: 202 SILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
++ E+ + + I + ++GAL+ G+ + + ED N+V M G++ + +YN I+
Sbjct: 255 KVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMING 314
Query: 261 LCKLRKCAEAKALL-----------------------------------DEMLSKGMKPN 285
CKL + E + LL D M+ G
Sbjct: 315 YCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGT 374
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
++TY+ + GFC G ++A K + +M G+ PN T++ K G E AL K
Sbjct: 375 TLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK 434
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
E++A+G N T+ +++ GL +++EA+EL +KE
Sbjct: 435 ETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKE 473
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P++ TYN +I C+S + S A S+ ++ K I PNA ++ L+ G K+ +
Sbjct: 712 LTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAF 771
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ Q M + G++ V Y + IH LC EA LLD+M+ + PN +TY I G+
Sbjct: 772 KLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGY 831
Query: 297 CKDGNFEEAKKFYRIMSNSGLSP 319
+ GN + K Y M GL P
Sbjct: 832 ARCGNMKAITKLYNEMHICGLLP 854
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N VI C+ + A ++ ++ K P+ ++ +L+ G + + M
Sbjct: 649 WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEML 708
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ + YN I+ LCK + A +L +++ SKG+ PN++TY+ I G CKDGN
Sbjct: 709 SARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTT 768
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA K + M G+ P Y +++ +C G E A+ + I PNF T +L+
Sbjct: 769 EAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLI 828
Query: 364 TGLA------GASKVSEAKELIGLVKEKFTKNV 390
G A +K+ + GL+ +T +V
Sbjct: 829 QGYARCGNMKAITKLYNEMHICGLLPANWTGHV 861
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S +F+ LL A A K+ VF E K G + L + NR++ ++ D +A ++
Sbjct: 93 SAASFDLLLRAHADAGQLKDALYVFDEMGKA-GSRRTLRSCNRLLNQLVQAGDIGTAVAV 151
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+M P+ + + + ++ + L+ ME G+ + Y+ + C+
Sbjct: 152 FQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCR 211
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR-IMSNSGLSPNSS 322
+ + A+ LL + KG+ PN VTY+ + G+CK+G EEA+K + I N + +
Sbjct: 212 IGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEV 271
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y ++ C+ G E A E I G N +++ G ++ E ++L+
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL 328
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 28/306 (9%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A TE A+ +KE L +V N ++ L + E + +F K + D
Sbjct: 422 KAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRM-KEWSCPCDS 480
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I +C+ D A I EM+ P+ F + + G + ++ VN +
Sbjct: 481 LTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVE 540
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ Y I CK +A L EM+ KG+KPN S + F ++G
Sbjct: 541 MSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGK 600
Query: 302 FEEAKKFYRIMSNSGLSPNSSVY------FTMVYFMCKGGDYETA--------LGFCK-- 345
+EA + ++++ + + S + GG++++A LG CK
Sbjct: 601 VDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLG 660
Query: 346 ----------ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ KG++P+ T SL+ G + + + A L ++ + T N+ T+N
Sbjct: 661 RVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYN 720
Query: 395 EIEAGL 400
+ GL
Sbjct: 721 SLIYGL 726
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N ++L L + + +F E K G PD TY+ +I S A+ + EM
Sbjct: 649 WNIVILGLCKLGRVADARNLF-EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEM 707
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ PN ++ +L+ G K + ++ G+ YN I CK
Sbjct: 708 LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNT 767
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA L +M+ +G++P TY+ I+G C G EEA K M + + PN Y+T+
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTL 827
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVP-NFT 357
+ + G+ + E G +P N+T
Sbjct: 828 IQGYARCGNMKAITKLYNEMHICGLLPANWT 858
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 2/281 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y Q E A R EM + ++ ++ +N ++ EV+++ ++ + G+
Sbjct: 280 YCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKL-LQANEYRGVNL 338
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D +YN ++ +C + A+ M R ++ L+ GF +D K+
Sbjct: 339 DEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLW 398
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+M + G+ + + K K +A L E L++G+ N VT + I G CK+
Sbjct: 399 FLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKN 458
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
EA++ + M +S Y T++ CK GD A E G+VP+
Sbjct: 459 RRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMF 518
Query: 360 KSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
S +TGL A + + ++ + + + + N T+ + AG
Sbjct: 519 NSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAG 559
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+A+SF L+ + +D V M + G + + N ++ L + A A+
Sbjct: 93 SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+M G P+ T + +C+DG A F + M GL N Y ++ C+
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G E A KG PN T LV G ++ EA++++ +KE
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKE 262
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 7/287 (2%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI-EFPK 173
H + + G + A+R F M K+ FN L+ AL K+ VK ++ +
Sbjct: 237 HGLCILGHW---KEAIRLFYAMIHRKIMPDQLTFNTLVDAL--CKEGMVVKAHYVVDVMI 291
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+KPD+ TYN ++ C S+ ++ M RK P+ S+ L+ G+ K + +
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + M + G+ YN IH LC + + +A AL EM+ G P+ VTY
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
CK+ EA +++ + L P+ +Y ++ MC+ G+ E A + +KG
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
P+ T ++ GL ++EA +L G + E + N T+N I G
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRG 518
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
FH+ S+ N + A+ F M + S+ F+ LL ++T K Y V ++ +
Sbjct: 25 FHSKSL----NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQM 80
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++GI + T N +I +FC + A+S+L ++ + +P+ ++F L+ G E K
Sbjct: 81 -DSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ ++ M G + V Y I+ LCK+ + A L M + +P V YS
Sbjct: 140 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST 199
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I CKD EA + M G+SPN+ Y ++++ +C G ++ A+ I +
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+P+ T +LV L V +A ++ +++ +V T+N + G
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+R + M++ R +V ++ ++ +L + E +F + GI P+ TY+
Sbjct: 175 TSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK-GISPNNFTYS 233
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C A + M + I P+ +F LV KE + V+ +M +
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+K V YN + C + + + D M+ KG P+ ++Y+ I G+CK ++A
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ MS GL P++ Y T+++ +C G A+ E + G +P+ T + L
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413
Query: 366 LAGASKVSEAKELIGLVK 383
L +++EA L+ +++
Sbjct: 414 LCKNHRLAEAMVLLKVIE 431
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 2/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S F L+ L + E ++F + G +PD+ TY +I C+ ++S+A
Sbjct: 123 STATFTTLIRGLCVEGKIGEALQLFDKMTGE-GFQPDVLTYGTLINGLCKVGNTSTAIRF 181
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L M++++ +P + ++ K+ + + + M G+ Y+ IH LC
Sbjct: 182 LRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI 241
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
L EA L M+ + + P+ +T++ + CK+G +A +M S L P+
Sbjct: 242 LGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVT 301
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
Y +++ C + + + KG VP+ + +L+ G + +A L +
Sbjct: 302 YNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMS 361
Query: 383 KEKFTKNVDTWNEIEAGL 400
++ + T+N + GL
Sbjct: 362 QQGLIPDTVTYNTLIHGL 379
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 135/308 (43%), Gaps = 5/308 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA--VR 131
D+L F+ ++ L + + Y+ ++ + DL+ + +S+ + G +E V
Sbjct: 263 DQLTFNTLVDALCKEGMVVK-AHYVVDVMIQSDLKPDVVTYNSL-MDGHCLRSEMGKTVN 320
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F M SV ++ L+ + + +F E + G+ PD TYN +I
Sbjct: 321 VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ-GLIPDTVTYNTLIHGL 379
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C A ++ EM P+ ++ L K + + +L+++E + +
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+Y++ + +C+ + A+ L ++ SKG+ P+ TY+ I G C+ G EA K +
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M +G SPN+ Y + + + A+ +E +++G+ + +T LV L+
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL 559
Query: 372 VSEAKELI 379
K+++
Sbjct: 560 DQSVKQIL 567
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T AV+ + +++ R V ++ ++ L K + F E GI P++ TY+
Sbjct: 186 TRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM-NARGIFPNVITYS 244
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC + A+S+L EM K+I PN ++ L+ KE K ++ K+L M
Sbjct: 245 TLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + V YN + LCK + +A AL +M G++PN TY+ I G CK G + A
Sbjct: 305 GQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNA 364
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+K ++ + G + Y M+ +CK G ++ AL + G +PN T ++
Sbjct: 365 QKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRS 424
Query: 366 LAGASKVSEAKELI 379
L + +A++L+
Sbjct: 425 LFEKDENDKAEKLL 438
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P+L T N +I FC + ++S+L ++ + +P+ + L+ G + +V
Sbjct: 95 GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLK---GEV 151
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ L ++ G + Y ++ LCK+ + A LL + + +P+ V YS
Sbjct: 152 KRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTI 211
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G CKD +A F+ M+ G+ PN Y T+++ C G A E I K
Sbjct: 212 IDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNI 271
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
PN T L+ L KV EAK+L+ + K +V T+N + GL
Sbjct: 272 NPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGL 320
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T N ++K C + + ++ + + N S+G L+ G K +
Sbjct: 130 GYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 189
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+L+M+E + V MY+ I LCK + +A EM ++G+ PN +TYS I+G
Sbjct: 190 VKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWG 249
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G A M ++PN Y ++ +CK G + A E KG +
Sbjct: 250 FCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPAD 309
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T S++ GL + + +A L
Sbjct: 310 VVTYNSVLDGLCKSQNLDKATAL 332
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 127/296 (42%), Gaps = 20/296 (6%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQY------------LEELKTRPDLQNERFHAHSIIL 119
H +A +N++S NG+ + +E+ TRPD+ +S I+
Sbjct: 158 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVV-----MYSTII 212
Query: 120 YG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
G + + A F EM+ + +V ++ L+ +A + E I
Sbjct: 213 DGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI-LKNI 271
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P++ TYN +I A C+ A +LAEM K + ++ +++ G K + +
Sbjct: 272 NPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATA 331
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M+++G++ Y I LCK + A+ L +L KG + TY+ I G C
Sbjct: 332 LFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLC 391
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
K+G F++A M ++G PN+ + ++ + + + + A IAKG +
Sbjct: 392 KEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 36/217 (16%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P FG ++ K + Y + + ME G++ + N+ I+ C L + A + ++
Sbjct: 63 PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L ++L G +P+++T + + G C G + + F+ + G N Y T++ +CK
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182
Query: 334 GGDYETAL-----------------------GFCKESI------------AKGWVPNFTT 358
G+ A+ G CK+ I A+G PN T
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242
Query: 359 MKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+L+ G A ++ A L+ ++ + NV T+N
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYN 279
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF-----PKTYGIKPDLDTYNRV 187
EM++ K+R SV F L+ L A+ E +VF G++PD+ +N +
Sbjct: 304 LAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTL 363
Query: 188 IKAFCESSDSSSAYSILAEMDRKSI-KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
I C+ S+L EM +I +PN ++ L+ GF+K ++ +++ + M G
Sbjct: 364 IDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG 423
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V N + LCK + A +EM KG+K N+ TY+ I FC N A
Sbjct: 424 VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAM 483
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M +SG SP++ VY++++ +C G A + G+ + + L++G
Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGF 543
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
K+ EL+ ++E K + T+N +
Sbjct: 544 CKKKKLERVYELLTEMEETGVKPDTITYNTL 574
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 2/258 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F EM L+ + + AL+ A + + F E + G PD Y +I
Sbjct: 447 AVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS-GCSPDAVVYYSLI 505
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + + A +++++ + S + L++GF K++K E V ++L ME G+K
Sbjct: 506 SGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVK 565
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK- 307
YN I L K A A ++++M+ +G++P+ VTY I+ +C N +E K
Sbjct: 566 PDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKI 625
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
F + S S + PN+ +Y ++ +C+ D + A+ ++ K PN TT +++ G+
Sbjct: 626 FGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVR 685
Query: 368 GASKVSEAKELIGLVKEK 385
+ +A EL+ + E+
Sbjct: 686 DKKMLHKAFELMDRMVEE 703
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 143/333 (42%), Gaps = 10/333 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK----TRPDLQNERFHAHSIILYGQANMTEHA 129
D + F+ I+ L + LEE+K RP N + I + +A + A
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRP---NTVTYNCLIDGFFKAGNFDRA 412
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
F++M+E ++ +V N L+ L F E K G+K + TY +I
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM-KGKGLKGNAATYTALIS 471
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
AFC ++ + A EM P+A + +L++G + D + V+ ++ G
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
S YNV I CK +K LL EM G+KP+++TY+ I K G+F A K
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS-LVTGLAG 368
M GL P+ Y +++ C + + + E + VP T + + L+ L
Sbjct: 592 EKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCR 651
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ V A L+ +K K + N T+N I G+
Sbjct: 652 NNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV 684
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD +++ C + A+ +L + R +A+S AL+ + + +
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG-------------- 281
N++L ME+ ++ V + + ++ LCK R+ EA + D + KG
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360
Query: 282 ----------------------------MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+PN+VTY+ I GF K GNF+ A + +R M+
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G+ PN T+V +CK G A+ F E KG N T +L++ G + ++
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480
Query: 374 EAKE 377
A +
Sbjct: 481 RAMQ 484
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 43/240 (17%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYL---EELKTRPDLQNERFHAHSIILY-GQANMTEH 128
LDR +++ I+ + + + L EE +PD +++I Y G+
Sbjct: 531 LDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD----TITYNTLISYLGKTGDFAT 586
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + ++M + LR SV + A++ A K+ E ++F E T + P+ YN +I
Sbjct: 587 ASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILI 646
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C ++D A S++ +M K ++PN +++ A++ G + +M+ +
Sbjct: 647 DALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDK----------KMLHK---- 692
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
A L+D M+ + +P+ +T G E+ K F
Sbjct: 693 ---------------------AFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHF 731
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
++A++ + + P+ LV ++K +VL + R G + N + L
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLG 292
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS------G 316
+ R LL EM + ++P+ VT+ + CK +EA + + + G
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVG 352
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV--PNFTTMKSLVTGLAGASKVSE 374
+ P+ ++ T++ +CK G E L +E + G + PN T L+ G A
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEE-MKMGNINRPNTVTYNCLIDGFFKAGNFDR 411
Query: 375 AKELIGLVKEKFTK-NVDTWNEIEAGL 400
A EL + E+ + NV T N + GL
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGL 438
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 312 ITYTTLIDGCCKEGDLDSAFE 332
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 124 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ++A K I + + +L +GL +
Sbjct: 303 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRS 362
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 363 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 398
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ +
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEH 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 334 RKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD KE G VP+ T
Sbjct: 394 KGDVWKGSKLLKEMQRDGHVPSVVT 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L KL+ +E+L G + ++ ++ FCKDG+ A+ + ++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 167
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ + GD + +A G P+ T L+ GL SK+ +A E
Sbjct: 168 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 378 L 378
L
Sbjct: 228 L 228
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++G+ P+ T+N +I + A + M+ K + P+ S+G L+ G K +++
Sbjct: 326 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 385
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
M+R G+ G Y I LCK EA LL+EM G+ P+ VTYS I
Sbjct: 386 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFCK G F+ AK+ + GLSPN +Y T++Y C+ G + A+ + I +G
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 505
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
+ T LVT L A KV+EA+E +
Sbjct: 506 RDHFTFNVLVTSLCKAGKVAEAEEFM 531
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ K+ G+ D+ TYN +I C S+ + Y +L +M ++ I PN ++ L+ GF
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
E K +++L M +G+ +N I EA + M +KG+ P+ V
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y + G CK+ F+ A+ FY M +G+ Y M+ +CK G + A+ E
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G P+ T +L+ G + AKE++
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 164/379 (43%), Gaps = 53/379 (13%)
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL-EELKTRPDLQNERFHAHSIIL 119
+ RA P H+ L E + +G S ++ L T L N + I++
Sbjct: 82 LVRARMYDPARHI-----------LKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILI 130
Query: 120 --YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
Y + M + ++ F+ M + SV NA+L ++ + + V E K I
Sbjct: 131 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KI 189
Query: 178 KPDLDTYNRVIKAFC-ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD+ T+N +I C E S S+Y ++ +M++ P ++ ++ + K+ +++
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSY-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE--------------------------- 269
++L M+ G+ + V YN+ IH LC+ + A+
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 270 --------AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
A LL+EMLS G+ PN VT++ I G +GNF+EA K + +M GL+P+
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG- 380
Y ++ +CK +++ A GF G T ++ GL + EA L+
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 381 LVKEKFTKNVDTWNEIEAG 399
+ K+ ++ T++ + G
Sbjct: 429 MSKDGIDPDIVTYSALING 447
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 139/343 (40%), Gaps = 29/343 (8%)
Query: 74 DRLAFSIAINKLSEANYFNGIS---QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D F+I IN L F S Q +E+ P + H Y + + A+
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH---WYCKKGRFKAAI 248
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
M + V +N L+ L IAK Y + + + I P+ TYN
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY-----LLLRDMRKRMIHPNEVTYNT 303
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F A +L EM + PN +F AL+ G E +++ K+ MME G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y V + LCK + A+ M G+ +TY+ I G CK+G +EA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK----GWVPNFTTMKSL 362
MS G+ P+ Y ++ CK G ++TA KE + + G PN +L
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA----KEIVCRIYRVGLSPNGIIYSTL 479
Query: 363 VTG------LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ L A ++ EA L G ++ FT NV + +AG
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ F M+ L S ++ LL L ++ ++ R F K G+ TY
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF-DLARGFYMRMKRNGVCVGRITYTG 408
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A +L EM + I P+ ++ AL+ GF K +++ +++ + R G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ I++ C++ EA + + M+ +G + T++ + CK G EA+
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F R M++ G+ PN+ + ++ G+ A E G P F T SL+ GL
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 367 AGASKVSEAKELI 379
+ EA++ +
Sbjct: 589 CKGGHLREAEKFL 601
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ TY+ +I FC+ +A I+ + R + PN + L+ + ++
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV-------- 287
++ + M G +NV + SLCK K AEA+ + M S G+ PN+V
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Query: 288 ---------------------------TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
TY + G CK G+ EA+KF + + + +
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ +Y T++ MCK G+ A+ E + + +P+ T SL++GL K
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 110 ERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
++ HS++L ++NM E ++ K + FN +L++ A E+ F
Sbjct: 788 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN-MLISKCCANG--EINWAF 844
Query: 169 --IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ + GI D DT + ++ + + +L EM ++ I P + + L+ G
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + V + M + + + + +L K K EA LL ML + P
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+++ ++ CK+GN EA + +MSN GL + Y ++ +C GD A +E
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G++ N TT K+L+ GL ++I
Sbjct: 1025 MKGDGFLANATTYKALIRGLLARETAFSGADII 1057
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D T+N +I C + + + A+ ++ M I + + A+V+ + ++++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VL M + G+ Y I+ LC++ A + +EM++ + P +V S +
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G +EA R M L P + + T+++ CK G+ AL G +
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ L+TGL ++ A EL +K + F N T+ + GL
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE R++ E G D T+N ++ + C++ + A + M I PN SF
Sbjct: 490 KEAIRIY-EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G+ + V M + G Y + LCK EA+ L + +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++V Y+ + CK GN +A + M + P+S Y +++ +C+ G A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 342 GFCKESIAKGWV-PNFTTMKSLVTGLAGASK 371
F KE+ A+G V PN V G+ A +
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 38/351 (10%)
Query: 66 ALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A+ E H D F++ + L +A +++ + + L N I YG +
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
A F EM + + + +LL L +E ++ F++ D Y
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLHAVPAAVDTVMY 616
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG------------FYKE-EK 231
N ++ A C+S + + A S+ EM ++SI P++ ++ +L++G F KE E
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 232 YEDV--NKVL---------------------QMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+V NKV+ + M+ G + N I ++ K
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ LL EM ++ PN TY+ ++G+ K + + YR + +G+ P+ ++V
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+C+ E L K I +G + T L++ +++ A +L+
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 847
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+L TYN ++ + + D S+++ + + I P+ + +LV G + E K+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ G++ +N+ I C + A L+ M S G+ + T + +
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ F+E++ MS G+SP S Y ++ +C+ GD +TA +E IA P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 359 MKSLVTGLAGASKVSEAKELI 379
++V LA K EA L+
Sbjct: 932 ESAMVRALAKCGKADEATLLL 952
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++G+ P+ T+N +I + A + M+ K + P+ S+G L+ G K +++
Sbjct: 326 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 385
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
M+R G+ G Y I LCK EA LL+EM G+ P+ VTYS I
Sbjct: 386 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFCK G F+ AK+ + GLSPN +Y T++Y C+ G + A+ + I +G
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 505
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
+ T LVT L A KV+EA+E +
Sbjct: 506 RDHFTFNVLVTSLCKAGKVAEAEEFM 531
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ K+ G+ D+ TYN +I C S+ + Y +L +M ++ I PN ++ L+ GF
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
E K +++L M +G+ +N I EA + M +KG+ P+ V
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y + G CK+ F+ A+ FY M +G+ Y M+ +CK G + A+ E
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G P+ T +L+ G + AKE++
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 42/355 (11%)
Query: 85 LSEANYFNGISQYL-EELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKL 141
L E + +G S ++ L T L N + I++ Y + M + ++ F+ M +
Sbjct: 95 LKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF 154
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC-ESSDSSSA 200
SV NA+L ++ + + V E K I PD+ T+N +I C E S S+
Sbjct: 155 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KICPDVATFNILINVLCAEGSFEKSS 213
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
Y ++ +M++ P ++ ++ + K+ +++ ++L M+ G+ + V YN+ IH
Sbjct: 214 Y-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 261 LCKLRKCAE-----------------------------------AKALLDEMLSKGMKPN 285
LC+ + A+ A LL+EMLS G+ PN
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VT++ I G +GNF+EA K + +M GL+P+ Y ++ +CK +++ A GF
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
G T ++ GL + EA L+ + K+ ++ T++ + G
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 139/343 (40%), Gaps = 29/343 (8%)
Query: 74 DRLAFSIAINKLSEANYFNGIS---QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D F+I IN L F S Q +E+ P + H Y + + A+
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH---WYCKKGRFKAAI 248
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
M + V +N L+ L IAK Y + + + I P+ TYN
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY-----LLLRDMRKRMIHPNEVTYNT 303
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F A +L EM + PN +F AL+ G E +++ K+ MME G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y V + LCK + A+ M G+ +TY+ I G CK+G +EA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK----GWVPNFTTMKSL 362
MS G+ P+ Y ++ CK G ++TA KE + + G PN +L
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA----KEIVCRIYRVGLSPNGIIYSTL 479
Query: 363 VTG------LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ L A ++ EA L G ++ FT NV + +AG
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ F M+ L S ++ LL L ++ ++ R F K G+ TY
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF-DLARGFYMRMKRNGVCVGRITYTG 408
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A +L EM + I P+ ++ AL+ GF K +++ +++ + R G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ I++ C++ EA + + M+ +G + T++ + CK G EA+
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F R M++ G+ PN+ + ++ G+ A E G P F T SL+ GL
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 367 AGASKVSEAKELI 379
+ EA++ +
Sbjct: 589 CKGGHLREAEKFL 601
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ TY+ +I FC+ +A I+ + R + PN + L+ + ++
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV-------- 287
++ + M G +NV + SLCK K AEA+ + M S G+ PN+V
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Query: 288 ---------------------------TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
TY + G CK G+ EA+KF + + + +
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ +Y T++ MCK G+ A+ E + + +P+ T SL++GL K
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 110 ERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
++ HS++L ++NM E ++ K + FN +L++ A E+ F
Sbjct: 788 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN-MLISKCCANG--EINWAF 844
Query: 169 --IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ + GI D DT + ++ + + +L EM ++ I P + + L+ G
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + V + M + + + + +L K K EA LL ML + P
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+++ ++ CK+GN EA + +MSN GL + Y ++ +C GD A +E
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G++ N TT K+L+ GL ++I
Sbjct: 1025 MKGDGFLANATTYKALIRGLLARETAFSGADII 1057
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D T+N +I C + + + A+ ++ M I + + A+V+ + ++++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VL M + G+ Y I+ LC++ A + +EM++ + P +V S +
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G +EA R M L P + + T+++ CK G+ AL G +
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ L+TGL ++ A EL +K + F N T+ + GL
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE R++ E G D T+N ++ + C++ + A + M I PN SF
Sbjct: 490 KEAIRIY-EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G+ + V M + G Y + LCK EA+ L + +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++V Y+ + CK GN +A + M + P+S Y +++ +C+ G A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 342 GFCKESIAKGWV-PNFTTMKSLVTGLAGASK 371
F KE+ A+G V PN V G+ A +
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 38/351 (10%)
Query: 66 ALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A+ E H D F++ + L +A +++ + + L N I YG +
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
A F EM + + + +LL L +E ++ F++ D Y
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLHAVPAAVDTVMY 616
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG------------FYKE-EK 231
N ++ A C+S + + A S+ EM ++SI P++ ++ +L++G F KE E
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 232 YEDV--NKVL---------------------QMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+V NKV+ + M+ G + N I ++ K
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ LL EM ++ PN TY+ ++G+ K + + YR + +G+ P+ ++V
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+C+ E L K I +G + T L++ +++ A +L+
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 847
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+L TYN ++ + + D S+++ + + I P+ + +LV G + E K+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ G++ +N+ I C + A L+ M S G+ + T + +
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ F+E++ MS G+SP S Y ++ +C+ GD +TA +E IA P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 359 MKSLVTGLAGASKVSEAKELI 379
++V LA K EA L+
Sbjct: 932 ESAMVRALAKCGKADEATLLL 952
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 6/292 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEH---AVRTFK 134
+S+ I++L+ A F+ + + L + +T ++ F I +YG N+ EH A+ T
Sbjct: 74 YSLMIDRLACARRFSDVEELLSKARTEKLRFSDEFFYRLIKMYG--NVAEHPQKAMDTLF 131
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
M + S FN +L L + Y+ V V+ P+ G+ D ++N ++K C+
Sbjct: 132 AMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRL-GVTLDTCSFNILVKGLCQY 190
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A S+L EM ++ +PNA+++ + + + + ++ + M + + + +Y
Sbjct: 191 GKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVY 250
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N+ I LC+ + EA L M S+G PNS TY + G G EAK MS
Sbjct: 251 NILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMST 310
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G+ P+ Y ++ +C A K+ + +G+VP T L+T +
Sbjct: 311 EGVRPSFQSYKLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLLTSM 362
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD-SSSAYSILAE 206
++ ++ L A+ + +V+ + + +T ++ + + R+IK + ++ A L
Sbjct: 74 YSLMIDRLACARRFSDVEELLSK-ARTEKLRFSDEFFYRLIKMYGNVAEHPQKAMDTLFA 132
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + P+ +F ++ + +YE V++V R G+ +N+ + LC+ K
Sbjct: 133 MPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGK 192
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA +LL EM +G +PN+ TYS F++ C+ ++A + + M ++ ++ VY
Sbjct: 193 FDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNI 252
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ +C+ A K ++G PN T + L+ GL K+ EAK L+
Sbjct: 253 LISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLV 305
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 35/326 (10%)
Query: 85 LSEANYFNGISQYLEEL-KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
LS+ F + +EE+ KT P+L + + ANM + AV EM ++ L
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIE----FP--------------------------- 172
F LL AL KE +VF + FP
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 173 --KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++PD+ + ++ + + + AY ++ +M ++ +PN + + L+ + E
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 231 KYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
K D +V MERYG ++ + Y I CK + ++LD+M KG+ P+ VTY
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ K FEE + M G P+ +Y ++ CK G+ + A+ E A
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEA 375
G P T ++ G + EA
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIK 178
Y A A +M + +V + L+ AL K E RVF+E + YG +
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCE 339
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D+ TY +I FC+ YS+L +M +K + P+ ++ ++ K+E++E+ ++
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
++ M+R G + +YNV I CKL + EA L +EM + G+ P T+ I GF
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA ++ M + G+ F+ P + T
Sbjct: 460 QGFLIEACNHFKEMVSRGI-------FS--------------------------APQYGT 486
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK---NVDTW 393
+KSL+ L K+ AK++ + K + NV W
Sbjct: 487 LKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAW 524
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 39/170 (22%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE K G PDL YN VI+ C+ + A + EM+ + P +F ++ GF
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 228 KEE-KYEDVNKVLQMMER-------YG-MKS----------------------------- 249
+ E N +M+ R YG +KS
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 250 -GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
VS + + IH+L EA + +M+ + P TY+ + G K
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK------------------- 173
KEM+ + +VG + L+ L+ A D +V+ V+ E +
Sbjct: 206 LKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCR 265
Query: 174 ---------------TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+G++P+ TY +I FC+ +A +LA+M + + N
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F ++ G+ + E ++ +ME+ G++ + YN LC++ + +AK LL M
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
KG+ PN V+Y+ I K+G+ EA++ +R M G P+ Y M+ K G
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIE 397
A F KE KG VP+ T LV G KV A L +K + TK NV + +
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALV 505
Query: 398 AGL 400
+GL
Sbjct: 506 SGL 508
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 1/301 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++I ++ LS A + + +E+K + + F++ I Y + A F E
Sbjct: 221 YTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECV 280
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
H + + + AL+ + + + + + G+ + +N +I +C
Sbjct: 281 GHGVEPNERTYGALINGFCKIGQIEAAEMLLADM-QLRGVGHNQIVFNTMIDGYCRHGMV 339
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A I A M++ I+ + ++ L G + + ED K+L +M G+ Y
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTL 399
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I K EA+ L +M KG +P+ VTY+ I G+ K+G+ EA++F + M GL
Sbjct: 400 ISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGL 459
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y +V+ C G + AL +E +G PN +LV+GLA + EA +
Sbjct: 460 VPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQ 519
Query: 378 L 378
L
Sbjct: 520 L 520
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E P+ +G+ + YN ++ ++ + + +L EM+ + ++P ++ LV G +
Sbjct: 173 ELPR-HGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRA 231
Query: 230 EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
V V M+R + V Y+ I++ C+ A + DE + G++PN TY
Sbjct: 232 GDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTY 291
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
I GFCK G E A+ M G+ N V+ TM+ C+ G E AL
Sbjct: 292 GALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEK 351
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G + T +L GL +++ +AK+L+ ++ EK
Sbjct: 352 MGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEK 387
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 7/292 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S IN S+ +E NER + I + + E A +M
Sbjct: 256 YSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQ 315
Query: 138 EHKLRHSVGAFNALLLALT---IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+ H+ FN ++ + + E+K V + GI+ D+ TYN + C
Sbjct: 316 LRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVM----EKMGIELDIYTYNTLACGLCRV 371
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A +L M K + PN S+ L++ KE + ++ + ME G + V Y
Sbjct: 372 NRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTY 431
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
NV I K EA+ EM KG+ P+ TY+ ++G C +G + A + + M +
Sbjct: 432 NVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKH 491
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G PN Y +V + K G E A + +A G P+ T LV L
Sbjct: 492 RGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ FC+S A+ +L E+ R + NA + +L+ + ++ + V +L+ ME G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V Y + + L + ++ +A+ DEM K + + YS I +C+ GN A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + G+ PN Y ++ CK G E A + +G N +++ G
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333
Query: 367 AGASKVSEAKELIGLVKEKFTKNVD--TWNEIEAGL 400
V +A E I V EK +D T+N + GL
Sbjct: 334 CRHGMVEKALE-IKAVMEKMGIELDIYTYNTLACGL 368
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 137 DEHKL-----RHSVG----AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
D H L RH VG +N+LL + T ++ V + E + G++P + TY +
Sbjct: 166 DAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM-ENRGVEPTVGTYTIL 224
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ + D S ++ EM RK++ + + A++ + + ++V +G+
Sbjct: 225 VDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGV 284
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y I+ CK+ + A+ LL +M +G+ N + ++ I G+C+ G E+A +
Sbjct: 285 EPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALE 344
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+M G+ + Y T+ +C+ E A KG PN+ + +L++ A
Sbjct: 345 IKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHA 404
Query: 368 GASKVSEAKELIGLVKEKFTK-NVDTWN 394
+ EA+ L ++ K ++ +V T+N
Sbjct: 405 KEGDMVEARRLFRDMEGKGSRPSVVTYN 432
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
S+ P ++S +V GF K +D + +L + R+G+ YN + S + R
Sbjct: 145 SVTPLSASV--VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAV 202
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
LL EM ++G++P TY+ + G + G+ + + Y M ++ + Y ++
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
C+GG+ A E + G PN T +L+ G ++ A+ L+
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLL 311
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 21/357 (5%)
Query: 52 ESNPEKILEICRAA---ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR--PD 106
E PEK E+CR L P ++ F++ I L + +E+ PD
Sbjct: 330 EGMPEKAYELCRQMRDHGLLPSTN----EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPD 385
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
H + Q A+ +++M+E ++ + +++LLL + E +
Sbjct: 386 AFTYNILIHWLC---QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ E P G P++ TY ++K + AY++LAEM + + N ++ L+ G
Sbjct: 443 LYTEMPGK-GFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL 501
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ +V ++L+ E G YN I+ K A A+ +M +KG+ PN
Sbjct: 502 CVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNI 561
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VTY+ FI G+CK + A K + GL P+ + Y +++Y C+ G+ AL
Sbjct: 562 VTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVL 621
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEA--------KELIGLVKEKFTKNVDTWNE 395
+ G +PN + S +TG + EA KE I L +T +D +++
Sbjct: 622 MLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSK 678
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A EM ++ + + +N L+ L + EV + F +T G P TYN
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF-ETEGFVPTAMTYNS 531
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ SA+++ +M K I PN ++ + + G+ K + K+L + G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ ++ YN I+ C+ + A +L ML G+ PN Y+ FI G+ EEA
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+FY M G+ +++ Y T++ K G+ AL E +AKG +P+ T +L GL
Sbjct: 652 RFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711
Query: 367 AGASKVSEAKELI 379
+ +A++L+
Sbjct: 712 CRNGDIDDARKLL 724
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%)
Query: 144 SVGAFNALLLALTIAKDY---KEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSS 198
+ G +++LA T+ Y +EV++ F +T G+ P TY +I+ E
Sbjct: 275 ATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPE 334
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
AY + +M + P+ + F ++ G ++ ++D + + M G+ + YN+ I
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFT-YNILI 393
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
H LC+ RK EA L ++M G+KP VTY + +C +G +EA K Y M G +
Sbjct: 394 HWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFT 453
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
PN Y T++ ++ A E G N T +L+ GL +V E E+
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 379 IGLVK-EKFTKNVDTWNEIEAG 399
+ + E F T+N I G
Sbjct: 514 LKRFETEGFVPTAMTYNSIING 535
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P++ TY I +C++S A +L ++ K ++P+ +++ +L+ GF +E
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHA 615
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL +M + G+ +S+YN I L+ EA ++M+ +G+ ++ TY+ I G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDG 675
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F KDGN A K Y M G P+ + + + +C+ GD + A E PN
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
L+ G K+ EA L + E+ DT +I G+
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGM 780
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A++ ++ LR + A+N+L+ + +V + K G+ P
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKD-GLLP 629
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN I + A +M ++ I + +++ L+ GF K+ K+
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G + H LC+ +A+ LLDEM ++PN + Y+ I G+ ++
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
G +EA + + M + P+ + Y +V G D
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD + ++ S+ ++ A ++LAEM K +A F ++ +KE Y+D
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M ++ + +V I SLCKLR A +L +M G P T++ +
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G EEA + +G + + T+++ C + AL +E++ G VP
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T L+ G +A EL
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYEL 339
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
++ V++A + A + EM I+P+ +A K VL+ M+
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G +N + L K + EA + DE+L+ G K + V + ++G+C
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + GL P Y ++ + G E A C++ G +P+ ++
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 364 TGL 366
GL
Sbjct: 360 KGL 362
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 6/202 (2%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ + + P+A S L+A + D +L M G M++V + + K
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A L DEM + ++P+ S I CK + A R M ++G P + +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------G 380
+V + KGG E AL E +A G + +L+ G +V +A ++ G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 381 LVKEKFTKNVDTWNEIEAGLPQ 402
LV T V E G+P+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPE 334
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 5/302 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F+ I N + +++ R Q+ +A I +A + AV F
Sbjct: 9 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 68
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EMD+ + + AL+ L A+ +E + + K G +P Y V+ C
Sbjct: 69 GEMDQPDMH----MYAALVKGLCNAERGEE-GLLMLRRMKELGWRPSTRAYAAVVDFRCR 123
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L EM K + P + A++ + KE + D +VL++M+ G K V
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + C K +A LL++M + G+ P++VTY+ I G C DG+ E A + R+M
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
GL + Y ++ +CK G + A +G PN T SL+ GL + K
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303
Query: 374 EA 375
A
Sbjct: 304 IA 305
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 4/258 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
++EL RP + R +A + + + A +EM E L V A++ A
Sbjct: 102 MKELGWRP---STRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCK 158
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ RV +E K G KP++ TYN +++ FC A ++L +M + P+A
Sbjct: 159 EGRMSDALRV-LELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 217
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G + E ++L++ME G+ + YN I++LCK + +A +L D +
Sbjct: 218 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 277
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
++G+KPN+VT++ I G CK G + A KF M ++G +P++ Y + + +CK
Sbjct: 278 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 337
Query: 338 ETALGFCKESIAKGWVPN 355
+ L F E + K P+
Sbjct: 338 QEGLSFIGEMLQKDVKPS 355
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 14/320 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVR 131
D ++++ I L EA + + E+ +PD+ H ++ ++ G N E +
Sbjct: 44 DVVSYATLIEGLCEAGRIDEAVELFGEMD-QPDM-----HMYAALVKGLCNAERGEEGLL 97
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKA 190
+ M E R S A+ A++ + KE + + E F K G+ P + T VI A
Sbjct: 98 MLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEK--GLAPCVVTCTAVINA 155
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C+ S A +L M + KPN ++ ALV GF E K +L M G+
Sbjct: 156 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 215
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ I C A LL M G+ + TY+ I CKDG ++A +
Sbjct: 216 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 275
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ G+ PN+ + +++ +CK G + A F ++ ++ G P+ T S + L
Sbjct: 276 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC--- 332
Query: 371 KVSEAKELIGLVKEKFTKNV 390
K+ ++E + + E K+V
Sbjct: 333 KMKGSQEGLSFIGEMLQKDV 352
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D TYN +I A C+ + A S+ ++ + IKPNA +F +L+ G K K +
Sbjct: 246 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 305
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K L+ M G Y+ I LCK++ E + + EML K +KP++V Y+ I+
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+ N+ + + M +SG +P+ Y T + C G A E G +
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
+L+ G A + A ++
Sbjct: 426 TMAYNTLMDGHASIGQTDHAVSIL 449
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 45/255 (17%)
Query: 176 GIKPDLDTYNR-----------------------------------VIKAFCESSDSSSA 200
G +PD T+N +I+ CE+ A
Sbjct: 5 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ EMD +P+ + ALV G E+ E+ +L+ M+ G + Y +
Sbjct: 65 VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
C+ RK EA+ +L EM KG+ P VT + I +CK+G +A + +M G PN
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI- 379
Y +V C G A+ + A G P+ T L+ G + A L+
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240
Query: 380 -----GLVKEKFTKN 389
GL+ +++T N
Sbjct: 241 LMEGDGLIADQYTYN 255
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 21/308 (6%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+++++ GQ E A R + M+ L +NAL+ AL + +F
Sbjct: 219 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL- 277
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+T GIKP+ T+N +I C+S + A+ L +M P+ ++ + + K +
Sbjct: 278 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 337
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ + M + +K Y + IH L K R EM+S G P+ VTY+
Sbjct: 338 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTS 397
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ +C +G EA+ MS +G++ ++ Y T++ G + A+ K+ +
Sbjct: 398 MRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 457
Query: 353 VPN----FTTMKSLV----------TGLAGASKVSEAKELIGLV----KEKFTKNVDTWN 394
VPN F ++ LV AG K E ++ GL K +F N T++
Sbjct: 458 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 517
Query: 395 EIEAGLPQ 402
I G +
Sbjct: 518 SILEGFSE 525
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 27/347 (7%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQN-ERFHAHSIILYGQANMTEHAVR 131
+ F+ IN L ++ + ++LE++ + PD F H + G ++ +
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG----SQEGLS 342
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM + ++ S + ++ L ++Y V R + E + G PD+ TY ++A+
Sbjct: 343 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS-GCNPDVVTYTTSMRAY 401
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C + A ++L EM + + + ++ L+ G + + +L+ M
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 252 SMYNVRIHSLCKLR-----------------KCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
Y + + L ++R + + L D M PNS TYS +
Sbjct: 462 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 521
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
GF +DG EEA +M +S N +Y +V CK Y A I G++P
Sbjct: 522 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 581
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ + L++GL + +AKE+ + K ++ + W I GL
Sbjct: 582 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 628
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/277 (17%), Positives = 115/277 (41%), Gaps = 22/277 (7%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
++I I+KL + + +++ E+ + PD+ + + G+ N E+
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN---VLM 415
Query: 135 EMDEHKLRHSVGAFNALL----------LALTIAKDYKEVKRV------FIEFPKTYGIK 178
EM ++ + A+N L+ A++I K V V FI ++
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D ++ + + + + M + PN+ ++ +++ GF ++ + E+ +
Sbjct: 476 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 535
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ +M+ + +Y + CK ++ +A L+ M+ G P ++Y H + G
Sbjct: 536 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLIC 595
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+G ++AK+ + SP+ V+ ++ + K G
Sbjct: 596 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 632
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 32/190 (16%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G + +N I C+ + A+ L D+M +G + V+Y+ I G C+ G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 302 FEEAKKFY-------------------------------RIMSNSGLSPNSSVYFTMVYF 330
+EA + + R M G P++ Y +V F
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-N 389
C+ + A +E KG P T +++ ++S+A ++ L+K + K N
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 390 VDTWNEIEAG 399
V T+N + G
Sbjct: 181 VWTYNALVQG 190
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHK-----------LRHSVGA-FNALLLALTIAK 159
A++ ++ G A++ T+HAV K+M LRH V +L LT A
Sbjct: 428 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 487
Query: 160 DYK--EVKRVFIEFP--KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+K E+ VF F K P+ TY+ +++ F E + A S+++ M SI N
Sbjct: 488 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 547
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+ ALV F K ++Y D ++ M ++G + Y + L + +AK +
Sbjct: 548 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 607
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K P+ + + I G K G+ + +++ ++ P+ Y
Sbjct: 608 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 656
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRT 132
D+ ++ I+ + ++ +E+ T+ ++ +++I Y + A++
Sbjct: 182 DKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQY 241
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M + + +V +N L+ AL + + V E + G+ PD+ TYN +I +C
Sbjct: 242 REDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRN-GLSPDVFTYNILINGYC 300
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A + EM RK ++ A ++ +L+ F ++ + ++ +++ ++ + G++ V
Sbjct: 301 KEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVV 360
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
MYN I+S C A ++ EM K + P+ VTY+ I GFC G +EA+ M
Sbjct: 361 MYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEM 420
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ G+ P+ +CK G + A KE + KG P+ +T SL+ GL
Sbjct: 421 TKRGIQPDLG--------LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
++ +VF E + P YN +I +C+ A +M ++ + +++
Sbjct: 200 EDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNL 259
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV + + + D VL+ M+R G+ V YN+ I+ CK +A + +EM KG
Sbjct: 260 LVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKG 319
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++ +VTY+ IY F + G +E + +++ G+ P+ +Y ++ C GGD E A
Sbjct: 320 VRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAF 379
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
E K P+ T +L+ G ++ EA+ LI
Sbjct: 380 EIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLI 417
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 155/373 (41%), Gaps = 12/373 (3%)
Query: 38 SKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY 97
S D+ L++L + + + A+ H L F + LS +
Sbjct: 32 SADRALCPLSVLPHLAASPSLPHLLLTASAAARPHATSLRFYAQLKSLSVPIPVASLHPL 91
Query: 98 LEELKTRP------DLQNERFHAHSI---ILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
L L + P D+ R + I+ T VR E+ R + +
Sbjct: 92 LSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRAL-ELLRQMPRPNAVTY 150
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM- 207
N ++ + V E + GI PD TY +I +C+ A + EM
Sbjct: 151 NTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEML 210
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + P+A + AL+ G+ K + + + M + G+ V+ YN+ +H+L +
Sbjct: 211 TQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRA 270
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
++A A+L+EM G+ P+ TY+ I G+CK+GN ++A + + MS G+ + Y ++
Sbjct: 271 SDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSL 330
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKF 386
+Y + G + K ++ KG P+ +L+ + A E++ + K++
Sbjct: 331 IYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRI 390
Query: 387 TKNVDTWNEIEAG 399
+ T+N + G
Sbjct: 391 PPDDVTYNTLIRG 403
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++G+ P+ T+N +I + A + M+ K + P+ S+G L+ G K +++
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
M+R G+ G Y I LCK EA LL+EM G+ P+ VTYS I
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFCK G F+ AK+ + GLSPN +Y T++Y C+ G + A+ + I +G
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
+ T LVT L A KV+EA+E +
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFM 571
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ K+ G+ D+ TYN +I C S+ + Y +L +M ++ I PN ++ L+ GF
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
E K +++L M +G+ +N I EA + M +KG+ P+ V
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y + G CK+ F+ A+ FY M +G+ Y M+ +CK G + A+ E
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G P+ T +L+ G + AKE++
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 164/379 (43%), Gaps = 53/379 (13%)
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL-EELKTRPDLQNERFHAHSIIL 119
+ RA P H+ L E + +G S ++ L T L N + I++
Sbjct: 122 LVRARMYDPARHI-----------LKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILI 170
Query: 120 --YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
Y + M + ++ F+ M + SV NA+L ++ + + V E K I
Sbjct: 171 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KI 229
Query: 178 KPDLDTYNRVIKAFC-ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD+ T+N +I C E S S+Y ++ +M++ P ++ ++ + K+ +++
Sbjct: 230 CPDVATFNILINVLCAEGSFEKSSY-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE--------------------------- 269
++L M+ G+ + V YN+ IH LC+ + A+
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 270 --------AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
A LL+EMLS G+ PN VT++ I G +GNF+EA K + +M GL+P+
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG- 380
Y ++ +CK +++ A GF G T ++ GL + EA L+
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 381 LVKEKFTKNVDTWNEIEAG 399
+ K+ ++ T++ + G
Sbjct: 469 MSKDGIDPDIVTYSALING 487
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 139/343 (40%), Gaps = 29/343 (8%)
Query: 74 DRLAFSIAINKLSEANYFNGIS---QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D F+I IN L F S Q +E+ P + H Y + + A+
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH---WYCKKGRFKAAI 288
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
M + V +N L+ L IAK Y + + + I P+ TYN
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY-----LLLRDMRKRMIHPNEVTYNT 343
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F A +L EM + PN +F AL+ G E +++ K+ MME G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y V + LCK + A+ M G+ +TY+ I G CK+G +EA
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK----GWVPNFTTMKSL 362
MS G+ P+ Y ++ CK G ++TA KE + + G PN +L
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA----KEIVCRIYRVGLSPNGIIYSTL 519
Query: 363 VTG------LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ L A ++ EA L G ++ FT NV + +AG
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ F M+ L S ++ LL L ++ ++ R F K G+ TY
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF-DLARGFYMRMKRNGVCVGRITYTG 448
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A +L EM + I P+ ++ AL+ GF K +++ +++ + R G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ I++ C++ EA + + M+ +G + T++ + CK G EA+
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F R M++ G+ PN+ + ++ G+ A E G P F T SL+ GL
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 367 AGASKVSEAKELI 379
+ EA++ +
Sbjct: 629 CKGGHLREAEKFL 641
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ TY+ +I FC+ +A I+ + R + PN + L+ + ++
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV-------- 287
++ + M G +NV + SLCK K AEA+ + M S G+ PN+V
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Query: 288 ---------------------------TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
TY + G CK G+ EA+KF + + + +
Sbjct: 593 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 652
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ +Y T++ MCK G+ A+ E + + +P+ T SL++GL K
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 110 ERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
++ HS++L ++NM E ++ K + FN +L++ A E+ F
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN-MLISKCCANG--EINWAF 884
Query: 169 --IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ + GI D DT + ++ + + +L EM ++ I P + + L+ G
Sbjct: 885 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 944
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + V + M + + + + +L K K EA LL ML + P
Sbjct: 945 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 1004
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+++ ++ CK+GN EA + +MSN GL + Y ++ +C GD A +E
Sbjct: 1005 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1064
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G++ N TT K+L+ GL ++I
Sbjct: 1065 MKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D T+N +I C + + + A+ ++ M I + + A+V+ + ++++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VL M + G+ Y I+ LC++ A + +EM++ + P +V S +
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G +EA R M L P + + T+++ CK G+ AL G +
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ L+TGL ++ A EL +K + F N T+ + GL
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE R++ E G D T+N ++ + C++ + A + M I PN SF
Sbjct: 530 KEAIRIY-EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G+ + V M + G Y + LCK EA+ L + +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++V Y+ + CK GN +A + M + P+S Y +++ +C+ G A+
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 342 GFCKESIAKGWV-PNFTTMKSLVTGLAGASK 371
F KE+ A+G V PN V G+ A +
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 38/351 (10%)
Query: 66 ALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A+ E H D F++ + L +A +++ + + L N I YG +
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
A F EM + + + +LL L +E ++ F++ D Y
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLHAVPAAVDTVMY 656
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG------------FYKE-EK 231
N ++ A C+S + + A S+ EM ++SI P++ ++ +L++G F KE E
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716
Query: 232 YEDV--NKVL---------------------QMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+V NKV+ + M+ G + N I ++ K
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ LL EM ++ PN TY+ ++G+ K + + YR + +G+ P+ ++V
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+C+ E L K I +G + T L++ +++ A +L+
Sbjct: 837 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 887
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+L TYN ++ + + D S+++ + + I P+ + +LV G + E K+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ G++ +N+ I C + A L+ M S G+ + T + +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ F+E++ MS G+SP S Y ++ +C+ GD +TA +E IA P
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 359 MKSLVTGLAGASKVSEAKELI 379
++V LA K EA L+
Sbjct: 972 ESAMVRALAKCGKADEATLLL 992
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 41/365 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D + ++ ++ L + L ++K+R L N + ++I++YG M + A
Sbjct: 242 DNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNR--NTYNILVYGYCKMGWLKEAAN 299
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ M ++ L V +N L+ L +E ++ E + + PD+ +YN +I
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGC 358
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
E S S A+ +L EM K +KPNA + +V + KE K +D + + ME G
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT----------------------- 288
YN I+ CK EA +DEM K MK +SVT
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 289 ------------YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
Y I G+ KDGN + A K + M + P++ Y ++ +C+ G
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNE 395
E A+ E + G +P+ TT +++ G V +A + +V+ F +V T N
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 396 IEAGL 400
+ GL
Sbjct: 599 LLRGL 603
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 33/269 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y Q+ HA + FK+M +LR ++ N LL +L + +P ++ +
Sbjct: 145 YVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL-------------VRYPSSHSVSF 191
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +N IK I PN ++F ++ G+ E K++D + L
Sbjct: 192 SREAFNDAIKL--------------------GIVPNVNTFNIVIYGYCLENKFKDAVEFL 231
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+M +Y YN + +LCK + +A+ LL +M S+G+ PN TY+ +YG+CK
Sbjct: 232 NVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKM 291
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA +M+ + L P+ Y ++ +C G E A E +P+ +
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+L+ G SK+SEA +L+ + EK K
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 36/327 (11%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I + ++ L+ RP+L +S++ Y ++ + F + + + +V FN ++
Sbjct: 157 IFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIY 216
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
+ +K+ F+ Y PD TYN ++ C+ A +L +M + +
Sbjct: 217 GYCLENKFKDAVE-FLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLL 275
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC---------KL 264
PN +++ LV G+ K ++ V+++M + + V YN+ I+ LC KL
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 265 R--------------------------KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
R K +EA LL+EM KG+KPN+VT++ + +CK
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G ++A M SG SP+ Y T++ CK G+ A E K + T
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +++ L K+ EA +L+ +++
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKR 482
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 1/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ IN E + + + LEE+ + N H + Y + + A T
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M+E +N L+ A + E R E + +K D T N +++ C
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILRTLCR 465
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
AY +L+ ++ + S+G L+ G++K+ + K+ M+ +
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I LC+ K +A + L+E+L G+ P+ TY+ ++G+C++G+ E+A +F+ M
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ P+ ++ +C G E AL ++KG + T +L+T L ++
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645
Query: 374 EAKELIGLVKEK 385
+A L+ ++EK
Sbjct: 646 DAFNLLSEMEEK 657
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A A RT EM ++ N +L L K +E ++ + + G
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL-LSSARKRGYFI 486
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D +Y +I + + + A + EM K I P+ ++ ++ G + K E L
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ + YN +H C+ +A ++M+ KP+ T + + G C +
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G E+A K + + G + ++ Y T++ +CK G + A E K P+ T
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
+++T L + ++ EA+E + + EK
Sbjct: 667 NAIITALTDSGRIREAEEFMSKMLEK 692
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 121/317 (38%), Gaps = 24/317 (7%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+D + + + L + L + R +E + I+ Y + + A++
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL 510
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EM E ++ S +N ++ L ++ E ++ G+ PD TYN ++ +C
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYC 569
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D A+ +M S KP+ + L+ G E E K+ G
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I SLCK + +A LL EM K + P+ TY+ I G EA++F M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 313 SNSGLSPNSSV-----------------------YFTMVYFMCKGGDYETALGFCKESIA 349
G P+ + Y + +C G Y+ A+ ES
Sbjct: 690 LEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749
Query: 350 KGWVPNFTTMKSLVTGL 366
KG + +T +L+ GL
Sbjct: 750 KGITVDKSTYINLMDGL 766
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++ IL+G + E A + +M E+ + V N LL L + ++ ++F +
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTW 619
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G D TYN +I + C+ A+++L+EM+ K + P+ ++ A++ +
Sbjct: 620 V-SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 232 YEDVNKVL-QMMERYGMKSGV----------------------SMYNVRIHSLCKLRKCA 268
+ + + +M+E+ + V Y+ I LC K
Sbjct: 679 IREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+A + E KG+ + TY + + G K
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIK 768
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFE 338
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK-WGLRPSVVSYNTLMNGYI 188
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ++A K I + + +L++GL +
Sbjct: 309 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRS 368
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEH 339
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 340 RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G VP+ T L+ G
Sbjct: 400 KGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L KL+ +E+L G + ++ ++ FCKDG+ A+ + ++ GL
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGL 173
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ + GD + +A G P+ T L+ GL SK+ +A E
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 233
Query: 378 L 378
L
Sbjct: 234 L 234
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 1/224 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP+++ YN +I A C+ S AY + +EM K I + ++ L+ GF K ++
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M + V YN+ + +LCK K EAK +L ML +KP+ +TYS + G+
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
++A+ + MS G++P+ Y ++ CK + AL KE K VP
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T SL+ GL + ++S +LI ++++ NV T+N + GL
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGL 419
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 3/305 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D++++ IN + + G + + ++ R N + I + + A F
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLF 222
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDLDTYNRVIKAFC 192
EM + V + L+ IA KE + E KT I P++ TYN ++ A C
Sbjct: 223 SEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT--INPNVYTYNILVDALC 280
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A ++LA M + +KP+ ++ L+ G++ + + V M G+ V
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + I+ CK + EA L EM K M P VTYS I G CK G M
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ N Y +++ +CK G + A+ + +G P T L+ GL ++
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460
Query: 373 SEAKE 377
+A+E
Sbjct: 461 KDAQE 465
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++ ++YG A+ + A+ EM + +V +N L+ AL KE K V
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K +KPD+ TY+ ++ + + A + M + P+ S+ L+ GF K +
Sbjct: 296 LKA-CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
++ + + M + M G+ Y+ I LCK + + L+DEM +G+ N +TY+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G CK+G+ + A + M + G+ P S + ++ +CKGG + A ++ + KG
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKG 474
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+ + ++ G + EA ++ ++E
Sbjct: 475 YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEE 507
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 1/260 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A++ +++D + +V +N ++ AL + E +F E GI D+ TY
Sbjct: 180 TRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAK-GISADVVTYT 238
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC +S A +L EM K+I PN ++ LV KE K ++ VL +M +
Sbjct: 239 TLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA 298
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+K V Y+ + + + +A+ + + M G+ P+ +Y+ I GFCK+ +EA
Sbjct: 299 CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEA 358
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
++ M + P Y +++ +CK G E +G N T SL+ G
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDG 418
Query: 366 LAGASKVSEAKELIGLVKEK 385
L + A L +K++
Sbjct: 419 LCKNGHLDRAIALFNKMKDQ 438
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ +Y +I FC++ A ++ EM +K++ P ++ +L+ G K + V
Sbjct: 334 GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ + V YN I LCK A AL ++M +G++P S T++ + G
Sbjct: 394 WDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDG 453
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A++ ++ + G + Y M+ CK G E AL + G VPN
Sbjct: 454 LCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPN 513
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T ++ L + +A++L+
Sbjct: 514 AVTFDIIINALFKKDENDKAEKLL 537
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T N +I FC + +S+LA++ ++ +P+ +F L+ G + + V
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQ---V 145
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
NK L ++ G+K Y I+ +CK+ A L+ ++ + KPN Y+
Sbjct: 146 NKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTI 205
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK EA + M+ G+S + Y T++Y C + A+G E + K
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTI 265
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
PN T LV L KV EAK ++ ++ + K +V T++ + G
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
FN +S + PD+ H+++I++ G + M + A+ FKEM + + + +
Sbjct: 327 FNAMSL----MGVTPDV-----HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
++L+ L + V + E + GI ++ TYN +I C++ A ++ +M
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEM-RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ I+P + +F L+ G K + +D + Q + G V YNV I+ CK
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLE 496
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
EA +L +M G PN+VT+ I K ++A+K R M GL
Sbjct: 497 EALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEDSLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A S+ + + ++P A SF L+ G+ + ++
Sbjct: 132 YPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K A L +EML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 VTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + K + VF K +G++P ++N ++ + D + + M
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITK-WGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K + N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR + +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF---------------- 292
+ YN I+ LCK +A+ L+DEM KG+KP+ VTY+
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEY 333
Query: 293 -------------------IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
I G C++G +A+K R M + GL P Y ++ CK
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD T KE G+VP+ T
Sbjct: 394 KGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ + +
Sbjct: 20 IHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILET-KGTQRSDIYVFSGLITAYLE 78
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + + + L KL+ ++ L G +
Sbjct: 79 SGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYF 138
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ FCK+G + A+ + ++ GL P + + T++ + GD +
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQ 198
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ A EL
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDYANEL 228
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E + G
Sbjct: 60 IAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 118
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGF 178
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 179 XLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 298
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 299 ITYTTLINGCCKEGDLDSAFE 319
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 169
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 170 RXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ++A K I + + +L++G +
Sbjct: 290 SVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRS 349
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 350 VDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVW 385
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 42/275 (15%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE---VKRVFIEFPKTYGIKPDLDTYN 185
A F + + LR SV ++N L+ D E +K + G++PD+ TY+
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML----ASGVQPDVYTYS 197
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+ S A + EM K + PN +F L+ G K + + ++ + M
Sbjct: 198 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 257
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE-- 303
+ + YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ +
Sbjct: 258 SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSA 317
Query: 304 ---------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+A+K R M + GL P++ Y ++
Sbjct: 318 FEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 377
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
CK GD KE G VP+ T L+ G
Sbjct: 378 FCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L KL+ +E+L G + ++ ++ FCKDG+ A+ + ++ GL
Sbjct: 95 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 154
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ + GD + +A G P+ T L+ GL SK+ +A E
Sbjct: 155 RPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANE 214
Query: 378 L 378
L
Sbjct: 215 L 215
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 41/365 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVR 131
D + ++ ++ L + L ++K+R L N + ++I++YG M + A
Sbjct: 242 DNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNR--NTYNILVYGYCKMGWLKEAAN 299
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ M ++ L V +N L+ L +E ++ E + + PD+ +YN +I
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGC 358
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
E S S A+ +L EM K +KPNA + +V + KE K +D + + ME G
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT----------------------- 288
YN I+ CK EA +DEM K MK +SVT
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 289 ------------YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
Y I G+ KDGN + A K + M + P++ Y ++ +C+ G
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNE 395
E A+ E + G +P+ TT +++ G V +A + +V+ F +V T N
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 396 IEAGL 400
+ GL
Sbjct: 599 LLRGL 603
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 33/269 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y Q+ HA + FK+M +LR ++ N LL +L + +P ++ +
Sbjct: 145 YVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL-------------VRYPSSHSVSF 191
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ +N IK I PN ++F ++ G+ E K++D + L
Sbjct: 192 SREAFNDAIKL--------------------GIVPNVNTFNIVIYGYCLENKFKDAVEFL 231
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+M +Y YN + +LCK + +A+ LL +M S+G+ PN TY+ +YG+CK
Sbjct: 232 NVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKM 291
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +EA +M+ + L P+ Y ++ +C G E A E +P+ +
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+L+ G SK+SEA +L+ + EK K
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 145/327 (44%), Gaps = 36/327 (11%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I + ++ L+ RP+L +S++ Y ++ + F + + + +V FN ++
Sbjct: 157 IFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIY 216
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
+ +K+ F+ Y PD TYN ++ A C+ A +L +M + +
Sbjct: 217 GYCLENKFKDAVE-FLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLL 275
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC---------KL 264
PN +++ LV G+ K ++ V+++M + + V YN+ I+ LC KL
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 265 R--------------------------KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
R K +EA LL+EM KG+KPN+VT++ + +CK
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G ++A M SG SP+ Y T++ CK G+ A E K + T
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +++ L K+ EA +L+ +++
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKR 482
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 1/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ IN E + + + LEE+ + N H + Y + + A T
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M+E +N L+ A + E R E + +K D T N +++ C
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILRTLCR 465
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
AY +L+ ++ + S+G L+ G++K+ + K+ M+ +
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I LC+ K +A + L+E+L G+ P+ TY+ ++G+C++G+ E+A +F+ M
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ P+ ++ +C G E AL ++KG + T +L+T L ++
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645
Query: 374 EAKELIGLVKEK 385
+A L+ ++EK
Sbjct: 646 DAFNLLSEMEEK 657
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 122/317 (38%), Gaps = 24/317 (7%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+D + + + L + L + R +E + I+ Y + + A++
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL 510
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EM E ++ S +N ++ L ++ E ++ G+ PD TYN ++ +C
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYC 569
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D A+ +M S KP+ + L+ G E E K+ G
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I SLCK + +A LL EM K + P+ TY+ I G EA++F M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 313 SNSGLSP--------NSSV---------------YFTMVYFMCKGGDYETALGFCKESIA 349
G P N +V Y + +C G Y+ A+ ES
Sbjct: 690 LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749
Query: 350 KGWVPNFTTMKSLVTGL 366
KG + +T +L+ GL
Sbjct: 750 KGITVDKSTYINLMDGL 766
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++ IL+G + E A + +M E+ + V N LL L + ++ ++F +
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTW 619
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G D TYN +I + C+ A+++L+EM+ K + P+ ++ A++ +
Sbjct: 620 V-SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 232 YEDVNKVL-QMMERYGMKSGV----------------------SMYNVRIHSLCKLRKCA 268
+ + + +M+E+ + V Y+ I LC K
Sbjct: 679 IREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+A + E KG+ + TY + + G K
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIK 768
>gi|414587959|tpg|DAA38530.1| TPA: hypothetical protein ZEAMMB73_367044 [Zea mays]
Length = 537
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 11/286 (3%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD + H++++ G+ A EM V FN L+L L + +E
Sbjct: 79 PDAVLYQIVIHALVVQGR---VAEATMLLDEMLLMGCAADVNTFNDLVLRLCGLRRVREA 135
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
R ++ T G P TY +++ C + + A ++L + + N ++
Sbjct: 136 AR-LVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTLLGRLP----EVNVVMLNTVIC 190
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G E K V K+ +MM G S V Y++ +H LCKL + +LD+M P
Sbjct: 191 GCLMEGKLARVTKLYEMMGSKGCPSDVHTYSILMHGLCKLGRFGSGVRMLDKMEENSCAP 250
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
N +TYS ++ FC++G +++A+ M G S NS Y ++Y +CK G + A
Sbjct: 251 NIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLV 310
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
+E ++G P+ T L+ L V + + L++E TK +
Sbjct: 311 QEMKSQGCKPDICTYNGLIKALCKEGNVDWS---MALLEEMVTKGI 353
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V N ++ + V +++ E + G D+ TY+ ++ C+ S +
Sbjct: 181 NVVMLNTVICGCLMEGKLARVTKLY-EMMGSKGCPSDVHTYSILMHGLCKLGRFGSGVRM 239
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M+ S PN ++ L+ F + ++D +L M G YN I++LCK
Sbjct: 240 LDKMEENSCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 299
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A L+ EM S+G KP+ TY+ I CK+GN + + M G+ PN+
Sbjct: 300 DGKLDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEMVTKGIKPNNFS 359
Query: 324 YFTMVYFMCKGGD 336
Y ++ +CK G+
Sbjct: 360 YNMLINELCKAGN 372
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 9/233 (3%)
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
P+ + + P +YN V+ + + A + M R + P +FG + +
Sbjct: 1 MPRRFAVAPSFRSYNIVLSTLARADCHADALLLYRRMLRDHVPPTTFTFGVVARALCRLG 60
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ D L+ M R+G +Y + IH+L + AEA LLDEML G + T++
Sbjct: 61 RAGDALARLRGMARHGCVPDAVLYQIVIHALVVQGRVAEATMLLDEMLLMGCAADVNTFN 120
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ C EA + M G P++ Y ++ +C+ + A
Sbjct: 121 DLVLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTL------L 174
Query: 351 GWVP--NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
G +P N + +++ G K++ +L ++ K +V T++ + GL
Sbjct: 175 GRLPEVNVVMLNTVICGCLMEGKLARVTKLYEMMGSKGCPSDVHTYSILMHGL 227
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 78 FSIAINKLSEANYF-NGISQY--LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
+SI ++ L + F +G+ +EE P++ HS + + M + A
Sbjct: 220 YSILMHGLCKLGRFGSGVRMLDKMEENSCAPNIMTYSTLLHS---FCRNGMWDDARAMLD 276
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+M + +N ++ AL + R+ E K+ G KPD+ TYN +IKA C+
Sbjct: 277 QMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM-KSQGCKPDICTYNGLIKALCKE 335
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALV 223
+ + ++L EM K IKPN S+ L+
Sbjct: 336 GNVDWSMALLEEMVTKGIKPNNFSYNMLI 364
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
HLD+ ++ IN L + Q L ++ + N + I + + A
Sbjct: 170 HLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYE 229
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ +M K+ V F+AL+ I +E +F E I PD T+N ++ A
Sbjct: 230 LYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK-NINPDYYTFNILVDAL 288
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A ++L M ++ + PN ++ +L+ G+ + VL + + G
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNA 348
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I+ CK++ EA +L ++M KG+ P+ VTY+ I G CK G A +
Sbjct: 349 HSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE 408
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M ++G N Y ++ +CK + A+ K+ +G P+ T L+ GL +
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR 468
Query: 372 VSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ A+++ L+ + ++ N T+N + GL
Sbjct: 469 LKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 4/278 (1%)
Query: 102 KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
K PD+ + + GQ E A F+EM + FN L+ AL +
Sbjct: 238 KISPDVVTFSALIYGFCIVGQ---LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNL 294
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
K K + + K G+ P++ TY+ ++ +C + + A +L + + PNA S+
Sbjct: 295 KGAKNMLVVMMKE-GVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCT 353
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ GF K + ++ + M+ G+ YN I LCK + + A L+DEM G
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
N TY+ I CK+ + ++A + + + G+ P+ + ++Y +CK G + A
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQ 473
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ ++KG+ N T +V GL EA+ L+
Sbjct: 474 DVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 23/274 (8%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
L Q N +H + T +M HS + ++ K E +F + + GI
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHS---YCTMINGFCKIKMVDEALSLFNDM-QFKGIA 380
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD TYN +I C+S S A+ ++ EM N ++ L+ K + +
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
++ ++ G++ + +N+ I+ LCK+ + A+ + ++LSKG N+ TY+ + G CK
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G F+EA+ M ++G+ P++ Y T++ + + E A +E IA
Sbjct: 501 EGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIA--------- 551
Query: 359 MKSLVTGLAGASKV----SEAKELIGLVKEKFTK 388
+ +V L G V SEAK+ +EKF K
Sbjct: 552 -RDVVYALEGLEMVLHLESEAKD-----QEKFGK 579
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 140/363 (38%), Gaps = 112/363 (30%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI----EFPKTYGIKPDL 181
++ V +F + K S+ FN +L +L + + + + EF +GI PD+
Sbjct: 47 VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEF---HGITPDI 103
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV------------------ 223
T+N +I +C ++ + A+S++A++ + +P+ +F L+
Sbjct: 104 FTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDH 163
Query: 224 ---AGFYKEE-----------KYEDVNKVLQMMERYG---MKSGVSMYNVRIHSLCKLRK 266
GF+ ++ K + LQM+ + +K V MYN I SLCK +
Sbjct: 164 VLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKL 223
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFC----------------------------- 297
+A L +M++K + P+ VT+S IYGFC
Sbjct: 224 VIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNI 283
Query: 298 ------KDGNFEEAKKFYRIM-----------------------------------SNSG 316
K+GN + AK +M S G
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+PN+ Y TM+ CK + AL + KG P+ T SL+ GL + ++S A
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAW 403
Query: 377 ELI 379
EL+
Sbjct: 404 ELV 406
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E +G+ + +N+ I+ C + + A +++ ++L G +P+++T++ I G C +G
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+EA F+ + G + Y T++ +CK G+ TAL ++ K N +
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
++ L V +A EL ++ +K + +V T++ + G
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGF 253
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN VI+ FCE + A + EM + ++G L+ F K K ++
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
L+ M+ G+++ + +Y I C + KAL DE+L +G P ++TY+ I GF
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +EA + + M G+ PN Y ++ +C G + AL I K PN
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
T ++ L V++A E++ L+K++ T+ N+ T+N + GL
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI-TYNILLGGL 397
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N ++K C + + A S+L EM R S+ P+ S+ ++ GF + ++ E ++ M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + + + I + CK K EA L EM G++ + V Y+ I GFC G +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
K + + G SP + Y T++ CK G + A + I +G PN T L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 364 TGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
GL G K EA +L+ L+ EK + N T+N I
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 5/292 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
L E++ R L + F +++I + + E A+ EM S+ + L+ A
Sbjct: 165 LREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
A E F++ K G++ DL Y +I+ FC+ + ++ E+ + P A
Sbjct: 224 KAGKMDEAMG-FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
++ L+ GF K + ++ +++ + M G++ V Y I LC + K EA LL+
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ K +PN+VTY+ I CKDG +A + +M P++ Y ++ +C GD
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 337 YETA--LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ A L + + P+ + +L+ GL +++ +A ++ L+ EK
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ + + + A+ +LA M ++ N + L+ G + + +L+ M R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I C+ ++ +A L +EM G + VT+ I FCK G +EA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
F + M GL + VY +++ C G+ + E + +G P T +L+ G
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ EA E+ + E+ + NV T+ + GL
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%)
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ S + A+S +M N S L+ + + K VL +M +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V +N+ + LC+ +C +A +LL EM + P+ +Y+ I GFC+ E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M SG S + + ++ CK G + A+GF KE G + SL+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 365 GLAGASKVSEAKELIGLVKEK 385
G ++ K L V E+
Sbjct: 256 GFCDCGELDRGKALFDEVLER 276
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
DTY +I FC++ + A +L +M ++P+ + L++ KE + ++ +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+R V +N+ I K A++LL M G+ P+ TYS I F K G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+EA F+ M +SG P++ + +++ + G+ + K+ + K V
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++I INKL + + +E +K TRPD N ++ L + ++ E +
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD--NITYNILLGGLCAKGDLDEASKLL 410
Query: 133 FKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + D V ++NAL+ L + ++ + G D T N ++ +
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-AGDRVTTNILLNST 469
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
++ D + A + ++ I N+ ++ A++ GF K +L M ++ V
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + SLCK +A L +EM P+ V+++ I G K G+ + A+
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS +GLSP+ Y ++ K G + A+ F + + G+ P+ S+ L
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV---LKYCIS 646
Query: 372 VSEAKELIGLVKEKFTKNV 390
E +L LVK+ K++
Sbjct: 647 QGETDKLTELVKKLVDKDI 665
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A + + +++ F M H + SV FN+LL L K+V+ E TYG+ P
Sbjct: 159 FNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTP 218
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T+N +I+ FC + + I ++ R +P+ ++ LV G + K V+
Sbjct: 219 DTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVV 278
Query: 240 QMMER--YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M + + V Y I C R+ +A A+ +EM+++G+K N++TY+ I G C
Sbjct: 279 KGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLC 338
Query: 298 KDGNFEEAKKFYRIMSNSG-LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+ FE+ K + G SP++ + T+++ C G+ + AL + P+
Sbjct: 339 EARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDS 398
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T +LV L +A++L+ + E+
Sbjct: 399 ATYSALVRSLCQGGHYEKAEDLLDKLLER 427
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 144/328 (43%), Gaps = 6/328 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ +++ I A+ + L E+ N+R SIIL G + A+ F
Sbjct: 26 VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR--TTSIILQGLCRCGRVAQALEHF 83
Query: 134 K-EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++ + V ++ L+ L +F + G +P+ TYN ++ C
Sbjct: 84 DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +A +++ E ++ P+ ++ L+A ++ + ++ M G +
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+N I LC+ R+ A+A + +EM+ + PN VTYS I G CK +EA++ M
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 263
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G P+ Y +V G ++ALG + +++G +P+ T ++ L +V
Sbjct: 264 VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRV 323
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+A E+ LV K + NV T++ + G
Sbjct: 324 DDAHEIFRELVANKCSPNVVTYSALIGG 351
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+NAL+ L +D + R I + PD+ TYN ++ A + A + +M
Sbjct: 135 YNALVDGLC-KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 193
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P SF A++ G + + D +V M + Y+V I LCK +
Sbjct: 194 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 253
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA+ LLD M+S+G +P+ V Y+ + GF G + A R M + G P+ Y +
Sbjct: 254 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 313
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ +CK G + A +E +A PN T +L+ G AS+V E +++ +E
Sbjct: 314 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM---REMAC 370
Query: 388 K-NVDTWNEIEAGL 400
+ NV T+N + GL
Sbjct: 371 RPNVVTYNTMIWGL 384
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + A+ TF +M E ++ +FNA++ L A+ + VF E P+L
Sbjct: 179 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR-DFHPNL 237
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY+ VI C+S A +L M + +P+ ++ LV GF + + +L+
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V Y V I LCK+ + +A + E+++ PN VTYS I G+C+
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+E K R M+ PN Y TM++ + E A G +E G+VP+ T +
Sbjct: 358 VDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRG 414
Query: 362 L 362
L
Sbjct: 415 L 415
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A + + +++ F M H + SV FN+LL L K+V+ E TYG+ P
Sbjct: 159 FNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTP 218
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T+N +I+ FC + + I ++ R +P+ ++ LV G + K V+
Sbjct: 219 DTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVV 278
Query: 240 QMMER--YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M + + V Y I C R+ +A A+ +EM+++G+K N++TY+ I G C
Sbjct: 279 KGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLC 338
Query: 298 KDGNFEEAKKFYRIMSNSG-LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+ FE+ K + G SP++ + T+++ C G+ + AL + P+
Sbjct: 339 EARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDS 398
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T +LV L +A++L+ + E+
Sbjct: 399 ATYSALVRSLCQGGHYEKAEDLLDKLLER 427
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + +EE+ R +++I Y N + E
Sbjct: 263 DVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEV 321
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + + + EV + +YG+KP++ YN ++K C
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGIC-KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 380
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +LAEM K + +F LV F + + V ++L+ M +G V
Sbjct: 381 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 440
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M + G KPN+++Y+ + G C + +A+ M
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 500
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G N + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 501 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 560
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I + L
Sbjct: 561 DEALELLNVMVNKGMSPNTIIYSSIASAL 589
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AVR +++ VG N +L A+ E + + P ++G +PD+ +YN V+
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP-SFGCEPDVVSYNAVL 271
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C + ++ EM R + PN +F L++ + +E V++VL M +G
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 331
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ MY I +CK A +L+ M S G+KPN V Y+ + G C +EE ++
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + + + +V F C+ G + + ++ + G +P+ T +++ G
Sbjct: 392 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 451
Query: 369 ASKVSEAKELI 379
+ EA L+
Sbjct: 452 EGLIDEAVMLL 462
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 141/315 (44%), Gaps = 3/315 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I+ L F + + L ++ + R +A I + E A
Sbjct: 300 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 359
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + L+ +V +N LL L A+ ++E + + E F K + D T+N ++ FC++
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL--DDVTFNILVDFFCQN 417
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+L +M P+ ++ ++ GF KE ++ +L+ M G K Y
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + LC + +A+ L+ +M+ +G N +T++ I CK G E+A + + M
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+G SP+ Y T++ + K G + AL + KG PN S+ + L+ ++++
Sbjct: 538 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 597
Query: 375 AKELIGLVKEKFTKN 389
++ +++ ++
Sbjct: 598 VIQMFDNIQDTTIRS 612
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
V E P+ G P Y+ +++A C SA +L ++ + + + ++
Sbjct: 181 VLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 239
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ ++ +L+ + +G + V YN + LC ++ + L++EM+ PN
Sbjct: 240 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 299
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VT++ I C++G FE + M G +P+ +Y T++ +CK G E A
Sbjct: 300 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 359
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+ G PN +L+ GL A + E +EL+ E F K+
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA---EMFDKD 399
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 120/282 (42%), Gaps = 1/282 (0%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ + + + I + + + + A
Sbjct: 399 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 458
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V K M + + ++ +L L A+ + + + + + + G + T+N +I
Sbjct: 459 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLIN 517
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A +L +M P+ S+ ++ G K K ++ ++L +M GM
Sbjct: 518 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 577
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+Y+ +L + + + + D + ++ ++V Y+ I CK G E A +F
Sbjct: 578 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 637
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
M +SG PN S Y ++ + G + A E +KG
Sbjct: 638 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 1/302 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+ + ++ IN+L F+ + ++ L N + + I E A+ F
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M + +V +N L+ + R+ ++ K G +PD TYN ++ F +
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL-LDLMKENGCEPDEWTYNELVSGFSK 490
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
SA EM + PN S+ AL+ G K+ K + +L+ ME G V
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I+ L K + +EA+ + D+M+ +G+ PN +TY+ I G C++G + A K + M
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PN Y +++Y +C+ G + A KE KG P+ T SL+ G ++
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 670
Query: 374 EA 375
A
Sbjct: 671 HA 672
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 47/347 (13%)
Query: 99 EELKTRPDLQNE------RFHAHS----IILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
EE++ D NE F +S +I + M E A +K+M ++ S+ F
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N L+ L+ +E + + + + Y + PD+ TY +I C + + A+ + M
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQ-YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC------ 262
++ PN+ ++ L+ G E + ++ +L+ M G++ V Y + I +LC
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 263 -----------------------------KLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+L K A L +ML +G+ PN+VTY+ I
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
C G F A K + M G N+ Y ++ +C GGD E A+ ++ + G +
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD-TWNEIEAG 399
P T +L+ G V+ A L+ L+KE + + T+NE+ +G
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 4/290 (1%)
Query: 114 AHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S ++ G N + A+ +EM E + +V + + AL + +E +
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K G +P++ TY +I A + +M ++ + PN ++ AL+ +
Sbjct: 330 KKR-GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ K+ ME +G + YN I LC +A L ++ML G P VTY+
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G+ GN A + +M +G P+ Y +V K G E+A + +E + G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
PN + +L+ G + KV A L+ ++E NV+++N + GL
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ TYN +I C S+A I M+ N ++ ++ G E
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M + G V YN I+ A LLD M G +P+ TY+ + G
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K G E A +++ M GL+PN Y ++ K G + AL K G PN
Sbjct: 488 FSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +++ GL+ ++ SEA+++ +V++ NV T+ + GL
Sbjct: 548 VESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ K M+E +V ++NA++ L+ + E +++ + + G+ P++ TY +I
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ-GLLPNVITYTTLI 590
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + + A+ I +M+++ PN ++ +L+ G +E K ++ +L+ MER G+
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 650
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ I L + A LL M+ G KPN TYS + G K+ E K F
Sbjct: 651 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIF 710
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S L+ K E E + + M G++ + +N I+ L K K EA+ +L ++
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ P+ TY+ I G C++ N + A + M G PNS Y T++ +C G
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
+ AL +E I KG P T +T L EA EL+ +K++ + NV T+ +
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 397 EAGL 400
+GL
Sbjct: 345 ISGL 348
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 6/306 (1%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
+Q L L L + RFH+ S+ N + A+ +F M + S FN LL +
Sbjct: 15 TQMLSLLPHFLSLSHNRFHSKSL----HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ K + + + + ++GI P++ T + +I +FC + A+S+LA++ + +P
Sbjct: 71 IAKMKHHSTLLSLSHQM-DSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQP 129
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+ ++F L+ G E K + + M G + V Y I+ LCK+ + A LL
Sbjct: 130 DTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
M+ K +PN Y+ I CKD EA + M G+SP+ Y ++++ +C
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTW 393
+++ E + +P+ + ++V L KV+EA +++ +++ NV T+
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Query: 394 NEIEAG 399
+ G
Sbjct: 310 TALMDG 315
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 20/272 (7%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+R M + + +V A+N ++ +L + E +F E T GI PD+ TYN
Sbjct: 182 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM-VTKGISPDIFTYN 240
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A C + ++L EM I P+ SF +V KE K + + V+ M +
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG----- 300
G++ V Y + C L + EA + D M+ KG PN ++Y+ I G+CK
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Query: 301 --------------NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
N +EA K + M G PN Y T++ CK + A+ E
Sbjct: 361 IHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 420
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ +P+ T +L+ GL ++ +A L
Sbjct: 421 MCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ TY +I C+ ++S+A +L M +K+ +PN ++ ++ K+ + +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ + YN IH+LC L + LL+EM+ + P+ V+++ +
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G EA M G+ PN Y ++ C + + A+ + KG +PN
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 356 FTTMKSLVTGLAGASKVSEA 375
+ +L+ G ++ +A
Sbjct: 341 VISYNTLINGYCKIQRIDKA 360
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
NM E AV+ F M +V ++N L+ + + +F E + I PD T
Sbjct: 375 NMDE-AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI-PDTVT 432
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y+ +I C A ++ EM S PN ++ L+ K + +L+ +E
Sbjct: 433 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ + + N+ I +C+ + A+ L + SKG++P+ TYS I G C+ G +
Sbjct: 493 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 552
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA K +R M +G + N +Y T+ + + A+ +E +A+G+ + +TM V
Sbjct: 553 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 612
Query: 364 TGLAGASKVSEAKELI 379
L+ K+++
Sbjct: 613 KMLSDDGLDQSLKQIL 628
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 140/339 (41%), Gaps = 24/339 (7%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
A+ L E + + + + K PD+ + F+ L + +TE A +M +
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVS--FNTVVDALCKEGKVTE-AHDVVDKMIQRG 301
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC--ESSDSS 198
+ +V + AL+ + + E +VF + G P++ +YN +I +C + D +
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVF-DTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Query: 199 SAYSILAE-------MDR----------KSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y+ L + MD K PN S+ L+ G+ K ++ + +
Sbjct: 361 IHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 420
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R + Y+ IH LC + + +A AL EM++ PN VTY + CK+
Sbjct: 421 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY 480
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + + S L P+ V + MC+ G+ E A +KG P+ T
Sbjct: 481 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 540
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
++ GL + EA +L + E T N +N I G
Sbjct: 541 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 579
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 61/134 (45%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ N I C + + +A + + + K ++P+ ++ ++ G + ++ +
Sbjct: 496 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 555
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M+ G +YN + + + A LL EM+++G ++ T + F+
Sbjct: 556 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615
Query: 297 CKDGNFEEAKKFYR 310
DG + K+ R
Sbjct: 616 SDDGLDQSLKQILR 629
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++ A T+ EM + + V +++++ AL A+ + V K G+ PD TYN
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYN 275
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C S A L +M ++PN ++ +L+ K + + K+ M +
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ ++ Y + E ALLD M+ G++P+ ++ I + K ++A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M GL+PN Y T++ +CK G + A+ + ++ I +G PN SL+ G
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Query: 366 LAGASKVSEAKELI 379
L K +A+ELI
Sbjct: 456 LCTCDKWDKAEELI 469
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
VR + D H FN L+ A + + VF + + +G+ P++ Y VI
Sbjct: 368 VRNGIQPDHH-------VFNILICAYAKQEKVDQAMLVFSKM-RQHGLNPNVVCYGTVID 419
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMMERYGMK 248
C+S A +M + + PN + +L+ G +K++ + +L+M++R G+
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR-GIC 478
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I S CK + E++ L D M+ G+KP+ +TY+ I G C G +EA K
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + G+ P+ Y T++ C+ + AL KE ++ G PN T ++ GL
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598
Query: 369 ASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+ + AKEL + + K + T+N I GL
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 149/366 (40%), Gaps = 43/366 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I L +A + + L + PD H GQ + A+
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP---KEAI 291
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
T K+M + +V +++L+ L E +++F K G++PD+ TY +++
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQG 350
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ +++L M R I+P+ F L+ + K+EK + V M ++G+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC------------- 297
V Y I LCK +A ++M+ +G+ PN + Y+ I+G C
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 298 ----------------------KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
K+G E++K + +M G+ P+ Y T++ C G
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ A ++ G P+ T +L+ G S++ +A L +V + N+ T+N
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 395 EIEAGL 400
I GL
Sbjct: 591 IILQGL 596
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 3/238 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F LL L K + + + G PD+ +YN ++K C+ + S A +L M
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189
Query: 208 --DRKS-IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
DR P+ S+ ++ GF+KE + M G+ V Y+ I +LCK
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A +L+ M+ G+ P+ +TY+ ++G+C G +EA + M + G+ PN Y
Sbjct: 250 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+++ ++CK G A +G P+ T ++L+ G A + E L+ L+
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ +YN V+ F + DS AYS EM + I P+ ++ +++A K + +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL M + G+ YN +H C + EA L +M S G++PN VTYS +
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G EA+K + M+ GL P+ + Y T++ G + G P+
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 356 FTTMKSLVTGLAGASKVSEA 375
L+ A KV +A
Sbjct: 376 HHVFNILICAYAKQEKVDQA 395
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+++ YG ++ + A+ F++M + L ++ + +L+ L + + + +
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+E GI + +N +I + C+ + + M R +KP+ ++ L+ G
Sbjct: 470 LEM-LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K ++ K+L M G+K + Y I+ C++ + +A AL EM+S G+ PN +T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ + G AK+ Y ++ SG S Y +++ +CK + AL +
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
T ++ L ++ EAK+L GLV + T ++ N IE G
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KPD+ TYN +I C + A +LA M +KP+ ++G L+ G+ + + +D
Sbjct: 511 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G+ + YN+ + L R+ A AK L + G + TY+ ++G
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 630
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ +EA + ++ + + L + + M+ + K G + A A G VP+
Sbjct: 631 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD 690
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T + L + E +L
Sbjct: 691 VRTYSLMAENLIEQGSLEELDDL 713
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +++ + +++A + + + + S++ ++ G K ++
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ Q + ++ +N+ I +L K + EAK L + G+ P+ TYS
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ G+ EE + M +G S +S + ++V + + GD A
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 40/189 (21%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY- 309
V Y + I C+ + A L ++ KG + +++T++ + G C D +A
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 310 RIMSNSGLSPNSSVYFTMVYFMC------------------KGG-------DYETAL-GF 343
R M+ G P+ Y ++ +C +GG Y T L GF
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 344 CKES------------IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
KE + +G +P+ T S++ L A + +A E++ +VK +
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271
Query: 391 DTWNEIEAG 399
T+N I G
Sbjct: 272 MTYNSILHG 280
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 7/283 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N AV +M+E + + V +N ++ +F + G++
Sbjct: 149 FCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERD-GVRA 207
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++ C S S A ++ +M + I PN +F AL+ F +E K+ + K
Sbjct: 208 DTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFY 267
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + V YN IH LC + EAK +LD M++KG P+ VTY+ I GFCK
Sbjct: 268 EEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKT 327
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTT 358
+E K R MS GL ++ + T++ + G + A +E ++ G PN T
Sbjct: 328 KRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA----QEIFSRMGSRPNIRT 383
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ GL +V +A L + K + ++ T+N + G+
Sbjct: 384 YSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGM 426
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 7/282 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ + F M+ + H + +N ++ L + V + K +G +PD+ T +
Sbjct: 86 DLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMK-FGYEPDVVTVSS 144
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ + A ++++M+ K + + ++ GF K + + MER G
Sbjct: 145 LINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDG 204
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+++ YN + LC + ++A L+ +M+ + + PN +T++ I F ++G F EAK
Sbjct: 205 VRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAK 264
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
KFY M + P+ Y +M++ +C G + A + KG P+ T +L+ G
Sbjct: 265 KFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGF 324
Query: 367 AGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGLPQ 402
+V E +L+ GLV + T N +AG P
Sbjct: 325 CKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + +V F AL+ A + E K+ + E + I PD+ TYN +I
Sbjct: 228 AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR-CIDPDVFTYNSMI 286
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A IL M K P+ ++ L+ GF K ++ ++ K+++ M + G+
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV 346
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I + + A+ + M G +PN TYS +YG C + E+A
Sbjct: 347 VDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVL 403
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ M S + + + Y +++ MC G+ E A FC S KG P+ T ++++G
Sbjct: 404 FESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSF-KGLEPDVVTYTTMISGFC 462
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + ++EM + V +N+++ L + E K++ ++ T G PD+ TYN +
Sbjct: 262 EAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQI-LDLMVTKGCFPDVVTYNTL 320
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I FC++ ++ EM ++ + + +F ++ G+++ + + ++ R G
Sbjct: 321 INGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFS---RMGS 377
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ + Y++ ++ LC + +A L + M M+ + TY+ I+G C GN E+A
Sbjct: 378 RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWD 437
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ +S GL P+ Y TM+ C+ ++ A
Sbjct: 438 LFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKA 470
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 10/247 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ IN F ++ EE+ R PD+ H + ++GQ + A +
Sbjct: 245 ITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQV---DEAKQI 301
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M V +N L+ K E ++ E + G+ D T+N +I+ +
Sbjct: 302 LDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR-GLVVDTVTFNTIIQGYF 360
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ +A I + M + PN ++ L+ G + E + + M++ M+ ++
Sbjct: 361 QAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDIT 417
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ IH +C + +A L + KG++P+ VTY+ I GFC+ +++A YR M
Sbjct: 418 TYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKM 477
Query: 313 SNSGLSP 319
GL P
Sbjct: 478 QEDGLLP 484
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + A + M + P+ F L++ K + Y+ V + ME G+ +
Sbjct: 47 SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I+ LC+ + A +++ +M+ G +P+ VT S I GFC+ A M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ +Y T++ CK G AL G + T SLVTGL + + S
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226
Query: 374 EAKELI-GLVKEKFTKNVDTWNEI 396
+A L+ +V NV T+ +
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAL 250
>gi|308044277|ref|NP_001183654.1| uncharacterized protein LOC100502248 [Zea mays]
gi|238013682|gb|ACR37876.1| unknown [Zea mays]
gi|414871016|tpg|DAA49573.1| TPA: hypothetical protein ZEAMMB73_384118 [Zea mays]
Length = 438
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 165/351 (47%), Gaps = 28/351 (7%)
Query: 49 LKSESNPEKILEICRAAALT----PESHLDRLAFSIAINKLSEAN--YFNGISQYLEELK 102
+++ES+P +I + A+AL+ P H R FS+A ++L L
Sbjct: 65 VRAESDPARIHSLV-ASALSSHDMPRLHTSRQLFSLATSRLIRLRRADLAASLLDLLLAS 123
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
T P + A ++ LY + A+R F R V + +ALL A A
Sbjct: 124 TPP---SPGLLARALSLYPG---PDDALRAFSS-SPPAARSDV-SLSALLSAFLRAGRLD 175
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK----PNASS 218
++K ++G+ P ++N ++ A ++S+ ++A +L EM K +K P+ S
Sbjct: 176 DIKSTITLAESSHGVAPGRASHNVLLHALVKNSELAAARKLLDEMANKKLKHRPAPDIIS 235
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++AG+ ++ ++ K+L+ + ++ V YN RI K + + + LLD M
Sbjct: 236 YNTVLAGYSVQDDEDEFGKLLKEISLSNLEPNVVTYNCRIQWFSKKGETVKGEELLDVME 295
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM---------SNSGLSPNSSVYFTMVY 329
SK + PN VTY+ + G+CK+GN A + ++ M S+ G+S +S VY +
Sbjct: 296 SKEIAPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSAHSQVYVVLFR 355
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ + AL CK A P F +K LV GL A + +EAK+++
Sbjct: 356 SLVEKEKLNDALWICKSCFAMKAAPPFEAVKGLVEGLVKAGRSTEAKDVVA 406
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 167/376 (44%), Gaps = 38/376 (10%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+AA P+S + L+ S+ ++ ++ Q L+E+ N + + Y +
Sbjct: 56 QAATSCPDS-VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTR 114
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ K M+ + +VG + L+ L+ A+D +V+ VF E K+ + D+
Sbjct: 115 EKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM-KSKNLSGDVY 173
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-------- 234
Y+ VI A+C + + A + E I+PN ++GAL+ GF K + E
Sbjct: 174 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 233
Query: 235 ------------------------VNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKC 267
V+K L++ ME+ G++ V YN L + +
Sbjct: 234 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 293
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EAK LL M+ KG++PN V+Y+ I C +G+ EA++ +R M+ +G P+ Y M
Sbjct: 294 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 353
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ K G A F E KG VP+ + +LV G KV A L +K++ +
Sbjct: 354 MDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 413
Query: 388 K-NVDTWNEIEAGLPQ 402
K N+ + + +GL +
Sbjct: 414 KPNLVAYTALISGLAK 429
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 11/275 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++ + C + P H + IN + + +++ R N+
Sbjct: 193 EVFDECVGNGIEPNEH----TYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 248
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK---RVFIEFPK 173
I Y + NM + A+ M++ + V +N L L A E K R+ IE
Sbjct: 249 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE--- 305
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G++P+ +Y +I C D A + EM +P+ ++ ++ G+ K+
Sbjct: 306 -KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + ME+ G+ + Y +H C K A L +EM +G KPN V Y+ I
Sbjct: 365 EAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 424
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G K+G EEA + Y M GL+P+ ++Y +V
Sbjct: 425 SGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+ D+ TYN + ++ A ++L M K ++PN S+ L++
Sbjct: 272 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS----------- 320
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
IH C EA+ L EM G +P+ VTY+ + G
Sbjct: 321 ----------------------IH--CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDG 356
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K G+ EA++F M GL P+ Y +V+ C G + AL +E +G PN
Sbjct: 357 YIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPN 416
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
+L++GLA + EA +L
Sbjct: 417 LVAYTALISGLAKEGRSEEAFQL 439
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 6/266 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A + EM+ ++ +N L+ L+ A E V T PD
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT----PDT 156
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TYN +I FC+S + AY L EM R P+ ++ L+ G K +++LQ
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 241 -MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ R + V +N + CK + A+ LL ML G P+ VTYS I G C+
Sbjct: 217 EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRC 276
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ ++ M + G P+ Y +V +CK G A K + G PN T
Sbjct: 277 GDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTY 336
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
+ GL K+ A +L+ +++K
Sbjct: 337 SLVFDGLCKIDKLDMANDLLTSIRDK 362
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 6/253 (2%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L+ A +A + + + E + G+ P YN + A C+S A ++ M
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ KP+ +F L+AG K + ++ +VL MER G + + YN I+ L + EA
Sbjct: 84 ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM-SNSGLSPNSSVYFTMVY 329
++ M + P++ TY+ I+GFCK G + A F M +G SP++ Y ++
Sbjct: 144 VLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200
Query: 330 FMCKGGDYETALGFCKESIA-KGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFT 387
+CK + A +E I K + +LV G A + A+EL+ +++
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260
Query: 388 KNVDTWNEIEAGL 400
+V T++ I GL
Sbjct: 261 PDVVTYSTIIDGL 273
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 10/289 (3%)
Query: 48 LLKSESNPE--KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
L KS PE ++++ + A P D + F+ I L +A + Q L+E++
Sbjct: 64 LCKSGKVPEAMEVVKNMKDGACKP----DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG 119
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
N + I A + AV + M + +NA++ + +
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQT---YNAIIHGFCKSGEIDRAY 176
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVA 224
E + G PD TY+ +I C+SS+ A +L EM RK + +F LV
Sbjct: 177 GFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD 236
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G+ K + + ++L M +G V Y+ I LC+ + ALL++M+S+G KP
Sbjct: 237 GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+ VTY+ + G CK G EA + + M G +PN+ Y + +CK
Sbjct: 297 DVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +++A C + + +A +L EM+++ + P S + V K K + +V++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ K V +N I LCK + EA+ +LDEM G N VTY+ I G G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMK 360
EA +M +P++ Y +++ CK G+ + A GF +E + G P+ T
Sbjct: 140 SGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 361 SLVTGLAGASKVSEAKELI 379
L+ GL +S + +A EL+
Sbjct: 197 ILINGLCKSSNLRKADELL 215
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D +SI IN L +++ + L+E+ R D ++++ Y +A + A
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M EH V ++ ++ L D + +E + G KPD+ TY ++ C
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK-GFALLEKMVSRGCKPDVVTYTVLVTGLC 309
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A ++ M PNA ++ + G K +K + N +L + G + V
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVV 369
Query: 253 MYNVRIHSL 261
+ + S+
Sbjct: 370 AFEALLLSV 378
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
NM E A +TF+EM E L + ++ D + + E K +GI P +
Sbjct: 369 DGNMLE-ASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLK-FGITPSV 426
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I A C+S D + A +L M + + P+ +F L+ GF K+ + ++L +
Sbjct: 427 TTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDI 486
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M GM YN IHSL EAK +L E++ +G+ P+ +T++ I GF K GN
Sbjct: 487 MRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGN 546
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
FEEA + MS + P+ ++ C+ + A + + G P+ +
Sbjct: 547 FEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNN 606
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
L+ G A ++ A L+ ++ + F N+ T G
Sbjct: 607 LIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALG 645
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 6/223 (2%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I + ++P++ Y+ + C+ + A EM + P+ + ++ G+ K
Sbjct: 344 INLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCK 403
Query: 229 EEKYEDVNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
D+NK Q M ++G+ V+ Y + I++ CK A A+ LL M+ +G+ P+
Sbjct: 404 ---VGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPD 460
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VT++ I GF K G ++A + IM ++G+SP++ Y +++ + G A
Sbjct: 461 VVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILH 520
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
E I +G P+ T ++ G + EA + + E+ K
Sbjct: 521 ELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVK 563
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K YGIK D+ Y VI A C+ S A S+L +M I ++ S +++ G+ K+ +
Sbjct: 281 KNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRS 340
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ K + ++ + ++ + +Y+ + LCK EA EM G+ P+ Y+
Sbjct: 341 D---KAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTII 397
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+CK G+ +A ++ M G++P+ + Y ++ CK GD A + + +G
Sbjct: 398 IGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGL 457
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGLPQ 402
+P+ T L+ G + +A EL+ G+ + T N + I G P
Sbjct: 458 IPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPN 513
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 33/260 (12%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K I P + N ++KA S A+ IL M + NAS + + E
Sbjct: 211 KLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNI 270
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ K+L M+ YG+K+ V Y + I +LCK+ A +LL +M+ G+ +SV+ S
Sbjct: 271 QSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSV 330
Query: 293 IYGFCKDG--------------------------------NFEEAKKFYRIMSNSGLSPN 320
I G+CK G N EA K ++ MS GL P+
Sbjct: 331 IDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPD 390
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y ++ CK GD A + E + G P+ TT L+ + ++ A+ L+
Sbjct: 391 CFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQ 450
Query: 381 -LVKEKFTKNVDTWNEIEAG 399
++ E +V T+N + G
Sbjct: 451 RMMLEGLIPDVVTFNCLIDG 470
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY-KEVKRVFIEFPKTYGIK 178
+G+ + A M + +NAL+ +L IA+ Y E K + E + G+
Sbjct: 471 FGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSL-IARGYPNEAKDILHELIRR-GLS 528
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ T+ VI F + + A+ + + M + +KP+ + AL+ G+ + + ++ N +
Sbjct: 529 PDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANAL 588
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
M G+K + +YN IH C A L+ M+ G PN T+ F GF
Sbjct: 589 FLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGF 646
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFH 113
++L+I R+A ++P D + ++ I+ L Y N L EL R PD+
Sbjct: 482 ELLDIMRSAGMSP----DTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMT---F 534
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + + E A + M E ++ V +ALL A+ E +F++
Sbjct: 535 TDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLD 594
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
G+KPDL YN +I FC + + ++A +++A M PN ++ A GF K+
Sbjct: 595 A-GLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEKK 649
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 144/339 (42%), Gaps = 13/339 (3%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQ---------YLEELKTRPDLQNERFHAHSIILYGQ 122
H LA +N++S NG+ + L+++ R N ++ I +
Sbjct: 152 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCK 211
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDL 181
+ A F EM + V ++ L+ I KE + E KT I P++
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT--INPNV 269
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ A C+ A S+LA M + +KP+ ++ L+ G++ + + V
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ V Y + I+ CK + EA L EM K M P VTYS I G CK G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
M + G N Y +++ +CK G + A+ + +G PN T
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
L+ GL ++ +A+E+ L+ + + NV T+N + G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG 488
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP++ Y+ +I A C+ S AY + +EM K I + ++ L+ GF E K ++
Sbjct: 196 KPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M + V YN+ + +LCK K EAK++L ML +KP+ +TYS + G+
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
++A+ + MS G++P+ Y ++ CK + AL KE K VP
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
T SL+ GL + ++ +LI + ++ NV T++ + GL
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 114 AHSIILYG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+S ++YG + + E A+ EM + +V +N L+ AL KE K V
Sbjct: 236 TYSTLIYGFCIEGKLKE-AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K +KPD+ TY+ ++ + + A + M + P+ ++ L+ GF K +
Sbjct: 295 MLKAC-VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++ + + M + M G+ Y+ I LCK + L+DEM +G N +TYS
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYS 413
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK+G+ + A + M + G+ PN+ + ++ +CKGG + A ++ + K
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G+ N T ++ G + EA ++
Sbjct: 474 GYHLNVYTYNVMIDGHCKQGLLEEALTML 502
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
++ V ++ L+ + + K+ + VF G+ PD+ TY +I FC++ A
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAM-SLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
++ EM +K++ P ++ +L+ G K + V ++ M G + V Y+ I
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDG 418
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK A AL ++M +G++PN+ T++ + G CK G ++A++ ++ + G N
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y M+ CK G E AL + G +P+ T + ++ L
Sbjct: 479 VYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T N +I FC + +S+LA++ ++ P+ + L+ G + + V
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQ---V 145
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
K L ++ G + Y I+ +CK+ A LL ++ + KPN V YS
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTI 205
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK EA + M+ G+S + Y T++Y C G + A+G E + K
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
PN T LV L KV EAK ++ ++ + K +V T++ + G
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T N +I FC + +SILA++ ++ P+ +F L+ G + + V
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ---V 1012
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
NK L ++ G + Y I+ +CK+ A LL ++ + KP+ V Y+
Sbjct: 1013 NKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK +A + M+ G+S + Y T++Y C G + A+G + + K
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTI 1132
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELI 379
PN T LV L E K+L+
Sbjct: 1133 NPNVRTYNILVDALC-----KEGKDLL 1154
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + +N+++ +F + S+A S+ ++ K I+P+ + L+ F + V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L + + G N I LC + +A D++L++G + N V+Y I G CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ A K + + PN +Y T++ +CK A G E KG + T
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK----NVDTWN 394
+L+ G K+ EA IGL+ E K NV T+N
Sbjct: 237 YSTLIYGFCIEGKLKEA---IGLLNEMVLKTINPNVYTYN 273
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E G++ + N+ I+ C + + ++L ++L +G P+++T++ I G C G
Sbjct: 952 LELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+A F+ + G N Y T++ +CK GD A+ ++ + P+ +
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071
Query: 362 LVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++ L VS+A L + K + +V T+N + G
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGF 1111
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ K+M+E V A++ ++ L E +F + GI+PDL TYN +I
Sbjct: 207 ALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGK-GIQPDLFTYNCLI 265
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A +LA M RK I P+ +F + F+K + M G++
Sbjct: 266 HGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIE 325
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y I + C L + +A + D M+SKG PN VTY+ I+G+C+ N +A F
Sbjct: 326 HDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYF 385
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M N+GL PN + T++ +CK G A G +PN T ++ GL
Sbjct: 386 LGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFK 445
Query: 369 ASKVSEAKEL 378
+ SEA L
Sbjct: 446 CNFHSEAMSL 455
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ FN ++ L + + + R F++ K G + D T + C+ SS+A S
Sbjct: 152 SIVTFNTIVNGLCVEGNVAQAIR-FVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSY 210
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M+ K+ + +++ +V G K+ + + M G++ + YN IH LC
Sbjct: 211 LKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCN 270
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ EA LL M+ KG+ P+ T++ F K G AK + M + G+ +
Sbjct: 271 FDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVT 330
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
Y +++ C + A+ I+KG +PN T SL+ G +++A +G +V
Sbjct: 331 YTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMV 390
Query: 383 KEKFTKNVDTWNEIEAGL 400
NV TW+ + G+
Sbjct: 391 NNGLDPNVVTWSTLIGGV 408
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 143/321 (44%), Gaps = 6/321 (1%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHK 140
N L + + + YL++++ + N A+S ++ G + M A+ F +M
Sbjct: 196 NGLCKVGHSSAALSYLKKMEEKN--CNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKG 253
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
++ + +N L+ L +KE + + GI PD+ T+N + F ++ S A
Sbjct: 254 IQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK-GIMPDVQTFNVIAGRFFKTGMISRA 312
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
SI + M I+ + ++ +++ + +D +V +M G + Y IH
Sbjct: 313 KSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHG 372
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
C+ + +A L EM++ G+ PN VT+S I G CK G AK+ + +M G PN
Sbjct: 373 WCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPN 432
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
++ + K + A+ +E W N ++ G+ + K+++A EL
Sbjct: 433 LQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFS 492
Query: 381 LVKEKFTK-NVDTWNEIEAGL 400
+ K K +V T+N + GL
Sbjct: 493 YLSSKGVKIDVVTYNIMIKGL 513
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 2/276 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A + A+ + +M K V FN L + K Y + I+ G+KP +
Sbjct: 60 NAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISL-IKHMSYIGVKPTV 118
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T N VI C S + +S+L M + ++P+ +F +V G E + +
Sbjct: 119 HTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDH 178
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
++ G +S + LCK+ + A + L +M K + YS + G CKDG
Sbjct: 179 LKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGM 238
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + M+ G+ P+ Y +++ +C ++ A + KG +P+ T
Sbjct: 239 VFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNV 298
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ +S AK + +V +V T+ I
Sbjct: 299 IAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSI 334
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 4/281 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+Q A + + M A F M + H V + +++ A + K+
Sbjct: 291 PDVQTFNVIAGR---FFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDA 347
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
VF + + G P++ TY +I +CE+ + + A L EM + PN ++ L+
Sbjct: 348 MEVF-DLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIG 406
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G K K ++ +M ++G + + + L K +EA +L E+
Sbjct: 407 GVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDL 466
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
N + Y+ + G C G +A + + +S+ G+ + Y M+ +CK G + A
Sbjct: 467 NIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLL 526
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ G PN T V GL ++S++ + + +K+K
Sbjct: 527 MKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDK 567
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ EM + L +V ++ L+ + A K +F+ K +G P+L T ++
Sbjct: 382 AMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHK-HGQLPNLQTCAIIL 440
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + S A S+ E+++ + N + ++ G K D ++ + G+K
Sbjct: 441 DGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVK 500
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN+ I LCK +A+ LL +M G PN TY+ F+ G + ++ K+
Sbjct: 501 IDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKY 560
Query: 309 YRIMSNSGLSPNSSVY-FTMVYF 330
M + G +++ F + YF
Sbjct: 561 LMFMKDKGFQADATTTKFLINYF 583
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + + + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK G ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + A F + + LR SV +FN L+ + E R+ +
Sbjct: 144 HSFVKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A + EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G +P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYAPS 415
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 47/157 (29%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFY+E G + + +N+ +HS K + A+++ D + G
Sbjct: 119 LVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+++ + G+ K GN +E + M SG+ P+ VY
Sbjct: 167 LRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPD-------VY------------ 207
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
T L+ GL SK+ +A EL
Sbjct: 208 ----------------TYSVLINGLCKESKMDDANEL 228
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY++VI C +S A+ + EM R I P+ + L+ F K E
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
MER G V Y IH+ K RK ++A + + MLSKG PN VTY+ I G
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336
Query: 296 FCKDGNFEEAKKFYRIMSNSGL-----------------SPNSSVYFTMVYFMCKGGDYE 338
CK G E+A + Y+IM + PN Y +V +CK +
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVK 396
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEI 396
A K +G PN +L+ G A K+ EA+E+ + E + NV T++ +
Sbjct: 397 EARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSL 455
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 135/329 (41%), Gaps = 16/329 (4%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++ I+ +A + + +E++ N + I Y ++ A +
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315
Query: 134 KEMDEHKLRHSVGAFNALLLALTIA-------KDYKEVKRVFIEFPKT---------YGI 177
+ M ++ + AL+ L A + YK +K+ +E P
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+P++ TY ++ C++ A +L M + +PN + AL+ G K K ++ +
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
V M G V Y+ I L K ++ A +L +ML PN V Y+ I G C
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G +EA K +M G +PN Y M+ K G E L ++ +KG PNF
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFV 555
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKF 386
T + L+ + EA +L+ +K+ +
Sbjct: 556 TYRVLINHCCSTGLLDEAHKLLEEMKQTY 584
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 33/360 (9%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGIS 95
L K R AL+LL+ E P D + ++ I+ L EA+ F
Sbjct: 20 LCKSGKWREALSLLEKEE-------------FVP----DTVLYTKMISGLCEASLFEEAM 62
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLL 153
+L ++ L N + I+L G N + R M S FN+L+
Sbjct: 63 DFLTRMRASSCLPN--VLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD--------SSSAYSILA 205
A + DY ++ + + G +P YN +I C S + + AY +
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQC-GCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEML 179
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
E K N S+F + G K EK +V + +MM + G S Y+ I LC
Sbjct: 180 EAGVVLNKVNISNFSRCLCGIGKFEKAYNV--IREMMSK-GFIPDTSTYSKVIGYLCNAS 236
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K +A L EM G+ P+ Y+ I FCK G E+A+ ++ M G +PN Y
Sbjct: 237 KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYT 296
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+++ K A + ++KG PN T +L+ GL A K+ +A ++ ++K++
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKE 356
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 19/292 (6%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A +EM ++ ++ L A ++ ++F E + GI PD+ Y
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRN-GIAPDVYVYTT 262
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +FC++ A + EM+R PN ++ AL+ + K K N+V +MM G
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM-----------------KPNSVTY 289
+ Y I LCK K +A + M + + +PN TY
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ G CK +EA+ + MS G PN VY ++ CK G + A +
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
G+ PN T SL+ L ++ A K L +++ NV + E+ GL
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 1/234 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F+ +D +V + AL+ L A KE R ++ G +P+ Y+ +I C
Sbjct: 367 FRVVDGASNEPNVFTYGALVDGLCKAYQVKEA-RDLLKSMSVEGCEPNHVVYDALIDGCC 425
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A + M PN ++ +L+ +K+++ + KVL M V
Sbjct: 426 KAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVV 485
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+Y I LCK+ K EA L+ M KG PN VTY+ I GF K G E+ + + M
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
S+ G +PN Y ++ C G + A +E W + + ++ G
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF 599
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ Y +I C+ + AY ++ M+ K PN ++ A++ GF K + E ++
Sbjct: 482 PNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLEL 541
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
LQ M G Y V I+ C EA LL+EM + Y I GF +
Sbjct: 542 LQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR 601
Query: 299 DG------NFEEAKK-------FYRIMSN------------------SGLSP----NSSV 323
+ +FE ++ YR++ + S SP N ++
Sbjct: 602 EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNI 661
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ T++ + + A + I++G +P + + L+ GL ++ EA +L+
Sbjct: 662 HITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 40/163 (24%)
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF---------- 308
HSLCK K EA +LL++ + P++V Y+ I G C+ FEEA F
Sbjct: 18 HSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCL 74
Query: 309 -----YRI--------------------MSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
YRI M G P+ ++ ++V+ C+ GDY A
Sbjct: 75 PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
K+ + G P + L+ G+ + + K+++ L ++ +
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEE--PGKDVLDLAEKAY 175
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 14/354 (3%)
Query: 52 ESNPEKILEICRAA---ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR--PD 106
E PEK E+CR L P ++ F++ I L + +E+ PD
Sbjct: 330 EGMPEKAYELCRQMRDHGLLPSTN----EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPD 385
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
H + Q A+ +++M+E ++ + +++LLL + E +
Sbjct: 386 AFTYNILIHWLC---QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ E P G P++ TY ++K + AY++LAEM + + N ++ L+ G
Sbjct: 443 LYTEMPGK-GFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL 501
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ +V ++L+ E G YN I+ K A A+ +M +KG+ PN
Sbjct: 502 CVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNI 561
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VTY+ FI G+CK + A K + GL P+ + Y ++++ C+ G+ AL
Sbjct: 562 VTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVL 621
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+ G +PN + S +TG + EA L ++KE + T+ + G
Sbjct: 622 MLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDG 675
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A EM ++ + + +N L+ L + EV + F +T G P TYN
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF-ETEGFVPTAMTYNS 531
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ SA+++ +M K I PN ++ + + G+ K + K+L + G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ ++ YN I C+ + A +L ML G+ PN Y+ FI G+ EEA
Sbjct: 592 LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ Y M G+ +++ Y T++ K G+ AL E +AKG +P+ T +L GL
Sbjct: 652 RLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711
Query: 367 AGASKVSEAKELI 379
+ +A++L+
Sbjct: 712 CRNGDIDDARKLL 724
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%)
Query: 144 SVGAFNALLLALTIAKDY---KEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSS 198
+ G +++LA T+ Y +EV++ F +T G+ P TY +I+ E
Sbjct: 275 ATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPE 334
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
AY + +M + P+ + F ++ G ++ ++D + + M G+ + YN+ I
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFT-YNILI 393
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
H LC+ RK EA L ++M G+KP VTY + +C +G +EA K Y M G +
Sbjct: 394 HWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFT 453
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
PN Y T++ ++ A E G N T +L+ GL +V E E+
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 379 IGLVK-EKFTKNVDTWNEIEAG 399
+ + E F T+N I G
Sbjct: 514 LKRFETEGFVPTAMTYNSIING 535
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P++ TY I +C++S A +L ++ K ++P+ +++ +L+ GF +E
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHA 615
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL +M + G+ +S+YN I L+ EA L ++M+ +G+ ++ TY+ I G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDG 675
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F KDGN A K Y M G P+ + + + +C+ GD + A E PN
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
L+ G K+ EA L + E+ DT +I G+
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGM 780
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 1/217 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A++ ++ LR + A+N+L+ + +V + K G+ P
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKD-GLLP 629
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ YN I + A + +M ++ I + +++ L+ GF K+ K+
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G + H LC+ +A+ LLDEM ++PN + Y+ I G+ ++
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
G +EA + + M + P+ + Y +V G D
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD + ++ S+ ++ A ++LAEM K +A F ++ +KE Y+D
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M ++ + +V I SLCKLR A +L +M G P T++ +
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G EEA + +G + + T+++ C + AL +E++ G VP
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T L+ G +A EL
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYEL 339
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
++ V++A + A + EM I+P+ +A K VL+ M+
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G +N + L K + EA + DE+L+ G K + V + ++G+C
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A + GL P Y ++ + G E A C++ G +P+ ++
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 364 TGL 366
GL
Sbjct: 360 KGL 362
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 6/202 (2%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ + + P+A S L+A + D +L M G M++V + + K
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A L DEM + ++P+ S I CK + A R M ++G P + +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------G 380
+V + KGG E AL E +A G + +L+ G +V +A ++ G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 381 LVKEKFTKNVDTWNEIEAGLPQ 402
LV T V E G+P+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPE 334
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
HLD++++ IN L + Q L ++ N + I + + HA
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
EM ++ V + L+ I KE +F + IKPD+ T+N ++
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQM-LLKNIKPDVYTFNILVDGL 284
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A ++LA M ++ + N ++ +L+ G++ ++ V M R G+ V
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDV 344
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y++ I+ LCK + EA L EM SK M PN+VTY+ I G K G +A
Sbjct: 345 QSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNE 404
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M N G + Y +++ +CK + A+ + +G PN T LV GL +
Sbjct: 405 MHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGR 464
Query: 372 VSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ +A+ + L+ + + +V +N + GL
Sbjct: 465 LKDAQAVYQDLLIKGYHLDVKMYNVMVNGL 494
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + ++ +N+L+ + K + VF + G+ PD+ +Y+ +I C++
Sbjct: 300 MIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARR-GVTPDVQSYSIMINGLCKTK 358
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A ++ EM KS+ PN ++ +L+ G K + D ++ M G + V Y+
Sbjct: 359 MVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYS 418
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ +LCK + +A L+ ++ +G++PN TY+ + G CK+G ++A+ Y+ +
Sbjct: 419 SLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIK 478
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G + +Y MV +CK G ++ AL + G +P+ T ++LV L K +A
Sbjct: 479 GYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKA 538
Query: 376 KELI 379
+L+
Sbjct: 539 VKLL 542
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS------------------- 217
I+PDL T+N +I FC + A+S+LA++ + P+
Sbjct: 95 IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154
Query: 218 ----------------SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S+G L+ G K + +VL+ ++ ++ V MYN I SL
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK + A L EM+ K + P+ VTY+ IYG G +EA + M + P+
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +V +CK G+ + A I +G N T SL+ G
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 105 PDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT----IA 158
PD+Q ++SI++ G + M + AV FKEM + + +N+L+ L I+
Sbjct: 342 PDVQ-----SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ V + G D+ TY+ ++ A C++ A +++ ++ + I+PN +
Sbjct: 397 DAWDLVNEM-----HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYT 451
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ LV G K + +D V Q + G V MYNV ++ LCK EA +L+ +M
Sbjct: 452 YTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME 511
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
G P++VTY + ++ ++A K R M G + S++
Sbjct: 512 DNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNI 556
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 7/221 (3%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N+++ + + + +A S +M+ K I+P+ +F L+ F VL +
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G I LC K EA D++++KG + V+Y I G CK G
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A + R + + PN +Y T++ +CK A C E I K P+ T +L+
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNVD----TWNEIEAGL 400
G ++ EA +GL + KN+ T+N + GL
Sbjct: 247 YGCLIVGRLKEA---VGLFNQMLLKNIKPDVYTFNILVDGL 284
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
R+F E + P+ TYN +I C + A +IL M+ KPN S+ AL+ G
Sbjct: 294 RIFQEM-SMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNG 352
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ K+E +L+ M GM G Y I LC+ E+ LLD+ML G+ P+
Sbjct: 353 LCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPD 412
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VT+S I GFC+ G + K+ M +GL+PNS +Y T++Y CK GD A
Sbjct: 413 VVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYV 472
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
G+ N LV+ L KV A+
Sbjct: 473 AMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 7/304 (2%)
Query: 79 SIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
++ + KL + + + +E+ R PD+ + + + G+ + A K+
Sbjct: 137 NMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGK---LKKAGYLLKK 193
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E SV +N +L YK + I+ + GI+ D TYN ++ C+++
Sbjct: 194 MEESGYVPSVVTYNTVLNWYCKKGRYKAALEL-IDQMGSKGIEADACTYNMLVDDLCKNN 252
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S+ Y +L +M ++ I PN ++ +++ GF KE K ++ Q M + YN
Sbjct: 253 RSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYN 312
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I C +A +L+ M + G KPN V+YS + G C+ FE +K M +
Sbjct: 313 ALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMN 372
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+ Y M+ +C+ G ++ + + G VP+ T L+ G K+
Sbjct: 373 GMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNV 432
Query: 376 KELI 379
KE+I
Sbjct: 433 KEII 436
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R F+EM L + +NAL+ ++++ + +E + G KP+ +Y+ ++
Sbjct: 292 ATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI-LEMMEATGPKPNEVSYSALL 350
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + + SIL M + ++ A++ G + + K+L M + G+
Sbjct: 351 NGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVV 410
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V ++V I+ C++ K K ++ +M G+ PNS+ Y+ IY +CK G+ EA K
Sbjct: 411 PDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV 470
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
Y MS G N + +V +CK G A F G VPN T ++ G
Sbjct: 471 YVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIING 527
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
L + R + ++ HS+IL + ++ M + ++ K+M + FN L++
Sbjct: 752 LYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYC 811
Query: 157 IAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ EV + F + + I PD+ T++ +I S ++ +L EM + P
Sbjct: 812 ---ETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIP 868
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+ + ALV + K+ ME G+ SG + + L K K EAK +L
Sbjct: 869 DRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVL 928
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
D ML K + P T++ ++ FC++ + EA K M + + Y ++ +C
Sbjct: 929 DFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCAD 988
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
GD +AL KE +G PN TT L+ +
Sbjct: 989 GDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 129/316 (40%), Gaps = 4/316 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + FS+ IN + + + ++ N + I Y + A + +
Sbjct: 412 DVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVY 471
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M ++ + F +L ++ KD K V F G P+ T++ +I +
Sbjct: 472 VAMS--RIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYG 529
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S + A+S+ EM + P+ ++G L+ + K+++ ++L +
Sbjct: 530 NSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTV 589
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY-RI 311
YN + K +A AL DEM+ + + P+S TY+ G + G A FY +
Sbjct: 590 TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ +SP +Y T V + + G + AL FC++ G + ++ G + K
Sbjct: 650 LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709
Query: 372 VSEAKELIGLVKEKFT 387
+++A ++ ++ T
Sbjct: 710 MAKAGDIFTMMWSGIT 725
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + T N ++ + + + EM + + P+ S+F L+ E K +
Sbjct: 128 GFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKA 187
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK------------ 283
+L+ ME G V YN ++ CK + A L+D+M SKG++
Sbjct: 188 GYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDD 247
Query: 284 -----------------------PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
PN +TY+ I GF K+G A + ++ MS L PN
Sbjct: 248 LCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPN 307
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y ++ C G++E AL + A G PN + +L+ GL +K +K ++
Sbjct: 308 CVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSIL 366
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
K N S F L+ + +E D + ++M G V N+ + L K RK
Sbjct: 95 KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
EML++ + P+ T++ I C +G ++A + M SG P+ Y T++ + C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVD 391
K G Y+ AL + +KG + T LV L ++ ++ L+ ++++ + N
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274
Query: 392 TWNEIEAG 399
T+N I G
Sbjct: 275 TYNSIING 282
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A ++ A+ ++M+++ L + A N +L + + +F I P L
Sbjct: 671 RAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSL 730
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ + + + S ++ M R I P+ + +L+ GF K + K+L+
Sbjct: 731 ATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKK 790
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ +N+ I C+ + +A L++ M + P+ T+ I +
Sbjct: 791 MLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVST 850
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+E+ M G P+ Y +V MC+ G A E A G +
Sbjct: 851 VQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESA 910
Query: 362 LVTGLAGASKVSEAKELIGLVKEK 385
LV GLA KV EAK ++ + K
Sbjct: 911 LVRGLAKCGKVEEAKLVLDFMLRK 934
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 97/235 (41%), Gaps = 1/235 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ +N LL K+ + ++ +T GI PD T + +I FC+S+ +
Sbjct: 729 SLATYNILLHGYAKKKNLSKCSNLYNIMMRT-GIFPDKLTCHSLILGFCKSAMLDVGLKL 787
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M + + +F L+ + + ++ ++ +M + + ++ ++ I L +
Sbjct: 788 LKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR 847
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ E+ LL EML +G P+ Y + C+ G+ A K M G+S
Sbjct: 848 VSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVA 907
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+V + K G E A + K +P T +L+ + EA +L
Sbjct: 908 ESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKL 962
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 1/269 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I +Y + A+ K M+ ++H++ ++ L+ KD+ VF + K G
Sbjct: 455 INMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKD-G 513
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +IKAFC + A ++ EM +K +P + +F ++ GF + +
Sbjct: 514 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRAL 573
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ MM R G V +N + L + R+ +A +LDEM G+ P+ TY+ + G+
Sbjct: 574 EIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGY 633
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + N GL + Y ++ CK G ++AL +E A+ N
Sbjct: 634 AALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNT 693
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
L+ G A V EA +L+ +K++
Sbjct: 694 FVYNILIDGWARRGDVWEAADLMQQMKQE 722
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A A+ F M +V FNAL+L L + ++ + E G+ P
Sbjct: 563 FARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALA-GVSP 621
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TY ++ + D+ A+ ++ + ++ + ++ AL+ K + + V
Sbjct: 622 DEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVT 681
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + +YN+ I + EA L+ +M +G++P+ TY+ FI CK
Sbjct: 682 REMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKA 741
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ A K + M G+ PN Y T+++ E AL +E G P+
Sbjct: 742 GDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVY 801
Query: 360 KSLVTGLAGASKVSEA 375
L+T L + V+EA
Sbjct: 802 HCLMTSLLSRATVAEA 817
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI +D Y+ ++ + + + + P+ S+G L+ + K K
Sbjct: 408 GIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKA 467
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V +MME G+K + Y++ I+ KL+ A + ++++ G+KP+ V Y++ I
Sbjct: 468 LEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKA 527
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC GN + A + M P S + +++ + G+ AL G +P
Sbjct: 528 FCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT 587
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T +LV GL ++ +A E++
Sbjct: 588 VHTFNALVLGLVEKRQMEKAVEIL 611
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 1/256 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ + A +EM+E + + ++ ++ T+ + ++ VF K G P +
Sbjct: 390 QSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRL-KECGFAPSV 448
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y +I + + S A + M+ IK N ++ L+ GF K + + + V +
Sbjct: 449 ISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFED 508
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ + G+K V +YN I + C + A ++ EM K +P S T+ I+GF + G
Sbjct: 509 VIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGE 568
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A + + +M SG P + +V + + E A+ E G P+ T +
Sbjct: 569 MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTT 628
Query: 362 LVTGLAGASKVSEAKE 377
++ G A +A E
Sbjct: 629 IMNGYAALGDTGKAFE 644
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 8/288 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + A +TF+ M + S + +L+ A + +D +E + K G++
Sbjct: 312 YARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKM-KEEGVEM 370
Query: 180 DLDTYNRVIKAFC------ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
L TY+ V+ F +S + A S++ EM+ + I + ++ G+ E
Sbjct: 371 SLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEE 430
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
V + ++ G V Y I+ K+ K ++A + M S G+K N TYS I
Sbjct: 431 KCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLI 490
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GF K ++ A + + GL P+ +Y ++ C G+ + A+ KE K
Sbjct: 491 NGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHR 550
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
P T ++ G A A ++ A E+ +++ V T+N + GL
Sbjct: 551 PTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGL 598
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 98/259 (37%), Gaps = 9/259 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+I ++ R + P H F+ + L E + L+E+ +E H ++
Sbjct: 574 EIFDMMRRSGCIPTVH----TFNALVLGLVEKRQMEKAVEILDEMALAGVSPDE--HTYT 627
Query: 117 IILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I+ G A + T A F ++ L V + ALL A + + V E
Sbjct: 628 TIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREM-SA 686
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
I + YN +I + D A ++ +M ++ ++P+ ++ + + K
Sbjct: 687 QNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLR 746
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
K +Q ME G+K V Y IH +A +EM G+KP+ Y +
Sbjct: 747 ATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMT 806
Query: 295 GFCKDGNFEEAKKFYRIMS 313
EA + I+S
Sbjct: 807 SLLSRATVAEAYIYSGILS 825
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP FG +V + + + + M G+ +Y IH+ R EA +
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDG------NFEEAKKFYRIMSNSGLSPNSSVYFT 326
+ +M +G++ + VTYS + GF K G N + A+ R M G+ +Y T
Sbjct: 359 CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHT 418
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
M+ G+ E L K G+ P+ + L+ KVS+A E+
Sbjct: 419 MMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEV 470
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 167/376 (44%), Gaps = 38/376 (10%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+AA P+S + L+ S+ ++ ++ Q L+E+ N + + Y +
Sbjct: 132 QAATSCPDS-VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTR 190
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ K M+ + +VG + L+ L+ A+D +V+ VF E K+ + D+
Sbjct: 191 EKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM-KSKNLSGDVY 249
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-------- 234
Y+ VI A+C + + A + E I+PN ++GAL+ GF K + E
Sbjct: 250 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 309
Query: 235 ------------------------VNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKC 267
V+K L++ ME+ G++ V YN L + +
Sbjct: 310 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EAK LL M+ KG++PN V+Y+ I C +G+ EA++ +R M+ +G P+ Y M
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ K G A F E KG VP+ + +LV G KV A L +K++ +
Sbjct: 430 MDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489
Query: 388 K-NVDTWNEIEAGLPQ 402
K N+ + + +GL +
Sbjct: 490 KPNLVAYTALISGLAK 505
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 11/275 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++ + C + P H + IN + + +++ R N+
Sbjct: 269 EVFDECVGNGIEPNEH----TYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK---RVFIEFPK 173
I Y + NM + A+ M++ + V +N L L A E K R+ IE
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE--- 381
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G++P+ +Y +I C D A + EM +P+ ++ ++ G+ K+
Sbjct: 382 -KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + ME+ G+ + Y +H C K A L +EM +G KPN V Y+ I
Sbjct: 441 EAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 500
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G K+G EEA + Y M GL+P+ ++Y +V
Sbjct: 501 SGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+ D+ TYN + ++ A ++L M K ++PN S+ L++
Sbjct: 348 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS----------- 396
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
IH C EA+ L EM G +P+ VTY+ + G
Sbjct: 397 ----------------------IH--CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDG 432
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K G+ EA++F M GL P+ Y +V+ C G + AL +E +G PN
Sbjct: 433 YIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPN 492
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
+L++GLA + EA +L
Sbjct: 493 LVAYTALISGLAKEGRSEEAFQL 515
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 6/266 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A + EM+ ++ +N L+ L+ A E V T PD
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT----PDT 156
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
TYN +I FC+S + AY L EM R P+ ++ L+ G K +++LQ
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 241 -MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ R + V +N + CK + A+ LL ML G P+ VTYS I G C+
Sbjct: 217 EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRC 276
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ ++ M + G P+ Y +V +CK G A K + G PN T
Sbjct: 277 GDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTY 336
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
+ GL K+ A +L+ +++K
Sbjct: 337 SLVFDGLCKIDKLDMANDLLTSIRDK 362
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 6/253 (2%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L+ A +A + + + E + G+ P YN + A C+S A ++ M
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ KP+ +F L+AG K + ++ +VL MER G + + YN I+ L + EA
Sbjct: 84 ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM-SNSGLSPNSSVYFTMVY 329
++ M + P++ TY+ I+GFCK G + A F M +G SP++ Y ++
Sbjct: 144 VLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200
Query: 330 FMCKGGDYETALGFCKESIA-KGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFT 387
+CK + A +E I K + +LV G A + A+EL+ +++
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260
Query: 388 KNVDTWNEIEAGL 400
+V T++ I GL
Sbjct: 261 PDVVTYSTIIDGL 273
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 48 LLKSESNPE--KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
L KS PE ++++ + A P D + F+ I L +A + Q L+E++
Sbjct: 64 LCKSGKVPEAMEVVKNMKDGACKP----DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG 119
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
N + I A + AV + M + +NA++ + +
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQT---YNAIIHGFCKSGEIDRAY 176
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVA 224
E + G PD TY+ +I C+SS+ A +L EM RK + +F LV
Sbjct: 177 GFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD 236
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G+ K + + ++L M +G V Y+ I LC+ + ALL++M+S+G KP
Sbjct: 237 GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+ VTY+ + G CK G EA + + M G +PN+ Y + +CK + A
Sbjct: 297 DVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356
Query: 345 KESIAKGWVPNFTTMKSLV 363
KG V + ++L+
Sbjct: 357 TSIRDKGRVTDVVAFETLL 375
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +++A C + + +A +L EM+++ + P S + V K K + +V++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ K V +N I LCK + EA+ +LDEM G N VTY+ I G G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMK 360
EA +M +P++ Y +++ CK G+ + A GF +E + G P+ T
Sbjct: 140 SGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 361 SLVTGLAGASKVSEAKELI 379
L+ GL +S + +A EL+
Sbjct: 197 ILINGLCKSSNLRKADELL 215
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRT 132
D +SI IN L +++ + L+E+ R D ++++ Y +A + A
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M EH V ++ ++ L D + +E + G KPD+ TY ++ C
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK-GFALLEKMVSRGCKPDVVTYTVLVTGLC 309
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ A ++ M PNA ++ + G K +K + N +L + G + V
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVV 369
Query: 253 MYNVRIHSL 261
+ + S+
Sbjct: 370 AFETLLLSV 378
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 6/333 (1%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
++L P+ L + +++ L A + Q+LE++ + + I Y +A
Sbjct: 447 SSLVPDCSL----YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAG 502
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
++A + +K M L S +++LL L+ +E + + + G+ + +
Sbjct: 503 FEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDK-GLPVNKVAF 561
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
++ + + D++ A+S+ EM+ + I P+A +F A + G K E+ + M +
Sbjct: 562 TVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSK 621
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G +YN IH LC K EA L EM KG+ P+ T + I GFCK+G +
Sbjct: 622 KGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKS 681
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M + G++P++ Y T++ CK D +A F + A GW P+ TT +
Sbjct: 682 AFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQ 741
Query: 365 GLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
G + K+S A ++ L+ N T+N +
Sbjct: 742 GFCSSQKISRAVTMLDELIAVGVVPNTVTYNTM 774
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 43/328 (13%)
Query: 113 HAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+A++I++ Y T A+ M ++ + S+ F+ ++ A + E +++F E
Sbjct: 314 YAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIF-E 372
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G+ P++ YN ++ + ++ D A + EM K I P+ ++F LVAG YK
Sbjct: 373 GIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYG 432
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K D ++ + + S+Y+V + LC + EA L++ML KGM P+ V ++
Sbjct: 433 KEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFN 492
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS---------------------------- 322
I + + G + A K Y+IM GL P+SS
Sbjct: 493 SVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDK 552
Query: 323 ------VYFTMV---YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
V FT++ YF K GD A E A+G P+ + + GL+ A V
Sbjct: 553 GLPVNKVAFTVLLDGYF--KVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVE 610
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA E + K+ F N +N + GL
Sbjct: 611 EAYEAFSEMSKKGFVPNNFVYNSLIHGL 638
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 2/269 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
++++AF++ ++ + G E++ R + + I +A + E A
Sbjct: 556 VNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEA 615
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + +N+L+ L E ++ E + G+ PD+ T N +I FC
Sbjct: 616 FSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREM-RQKGLLPDIFTTNIIINGFC 674
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ SA+ AEM + P+ ++ L+ G+ K ++ L M G ++
Sbjct: 675 KEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDIT 734
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+RI C +K + A +LDE+++ G+ PN+VTY+ + C D + A +
Sbjct: 735 TYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKL 793
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
PN ++ CK G E AL
Sbjct: 794 LKMAFVPNVVTTNVLLSHFCKQGMPEKAL 822
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN ++L K Y V + + +PD+ YN +I A+ +S A L M
Sbjct: 281 FNIMILCFC-QKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLM 339
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ KP+ +F ++ F E + K+ + ++ G+ V+MYN + K R
Sbjct: 340 IKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDV 399
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A L +EM KG+ P+ T++ + G K G ++ + +R S S L P+ S+Y
Sbjct: 400 CQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVS 459
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
V +C G + A+ F ++ + KG P+ S++ + A
Sbjct: 460 VAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRA 501
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S L+ GF E + ++L M G++ S ++ L ++ LL
Sbjct: 209 SILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRG 268
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ G +P + ++ I FC+ G A+ +M P+ Y ++ G
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNE 395
ALGF I G P+ T +++T V EA+++ G+ + + NV +N
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388
Query: 396 IEAG 399
+ +G
Sbjct: 389 LMSG 392
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF-------P 172
Y +A + AV TF M+++ + H++ AFN+LL AL +K+ ++ + +F +
Sbjct: 150 YARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDA 209
Query: 173 KTY--------------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
KTY G +PD+ TY ++ A C++ A ++ +
Sbjct: 210 KTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQD 269
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + +P + LV + + + ED ME+ G+ V +YN I + CK++K
Sbjct: 270 MSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKK 329
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
A ++D+M G+ PNS T++ + G +EA + +R M P+S Y
Sbjct: 330 FENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTM 388
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
M+ C+ E AL K K ++P+ T L+ GL +VS+A L+ + EK
Sbjct: 389 MIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEK 447
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG+ +L +N ++ A C+S + A I +M+ + P+A ++ L+ G+ +
Sbjct: 169 YGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPSLPK 227
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ +V M G + + Y + + +LCK + EA ++ +M S+G +P + YS ++
Sbjct: 228 MREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVH 287
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+ D E+A + M G+ P+ VY ++ CK +E A + G P
Sbjct: 288 TYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISP 347
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
N T ++ L K EA + + ++ + DT+
Sbjct: 348 NSRTWNIILNTLISLGKDDEAYRVFRSMIKRCKPDSDTYT 387
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
AA P D + + I ++ L + ++++ +R ++ + YG
Sbjct: 237 AAGCQP----DIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVD 292
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
E AV F +M++ + V +NAL+ A K ++ RV + + +GI P+ T
Sbjct: 293 MRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDM-QGHGISPNSRT 351
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N ++ AY + M ++ KP++ ++ ++ F + +K E KV + M
Sbjct: 352 WNIILNTLISLGKDDEAYRVFRSMIKRC-KPDSDTYTMMIKMFCENDKIEMALKVWKYMR 410
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+ ++V I+ LC + ++A LL++M+ KG++P T+ K+G
Sbjct: 411 LKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 467
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+Y+ V+ + + + ++A M RK N +FG ++ + + +K ++ +M
Sbjct: 108 SYHTVVTSLAKIRQYQLMWDVVAIM-RKEGVANVETFGIIMRKYARAQKLDEAVYTFNVM 166
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E+YG+ ++ +N + +LCK + +A+ + D+M ++ P++ TYS + G+ + +
Sbjct: 167 EKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPSL 225
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ ++ Y M +G P+ Y MV +CK G E A+ ++ ++G P
Sbjct: 226 PKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPT 278
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +J L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK G ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + A F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNXMQA 199
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M + GL P
Sbjct: 320 GSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G+VP+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 103/265 (38%), Gaps = 61/265 (23%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIK-PDLDTYN 185
H ++++ M H + L+ + +++ K VF +T G + D+ ++
Sbjct: 11 HTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFS 70
Query: 186 RVIKAFCESS---DSSSAYSILAEMD--------RKSIKPNAS-SFGALVAGFYKEEKYE 233
+I A+ ES D+ Y + E RK J+ + LV GFY+E
Sbjct: 71 GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESL-- 128
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
G + + +N+ +HS K + A+++ D + G++P+ V+++ +
Sbjct: 129 ----------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+ K G+ +E + M SG+ P+ VY
Sbjct: 179 NGYIKLGDLDEGFRLKNXMQASGVQPD-------VY------------------------ 207
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL 378
T L+ GL SK+ +A EL
Sbjct: 208 ----TYSVLINGLCKESKMDDANEL 228
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A ++M L SV ++ L+ +E R+ E + G P + TYN
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM-LSRGAVPTVVTYNT 312
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ S A +L M K++ P+ S+ L+ G+ + + + +
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I LC+L A L DEM+ G P+ T++ F+ GFCK GN AK
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M N GL P+ Y T + K GD A G +E +A+G+ P+ T + GL
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
+ EA EL+ GLV + T
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVT 519
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 131/324 (40%), Gaps = 41/324 (12%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
+Y + ++ E + F +M L V N +L L + +V R GI
Sbjct: 140 IYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGIC 199
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TYN ++ +FC+ A +L +M PN ++ LV G + E ++
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+Q M R G++ V Y+ I C+ + EA L +EMLS+G P VTY+ +YG CK
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY----------------------------- 329
G +A+K +M N L P+ Y T++Y
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379
Query: 330 ------FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI---- 379
+C+ GD + A+ E I G P+ T + V G + AKEL
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439
Query: 380 --GLVKEKFTKNVDTWNEIEAGLP 401
GL ++F E++ G P
Sbjct: 440 NRGLQPDRFAYITRIVGELKLGDP 463
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 14/276 (5%)
Query: 105 PDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PDL +++ ++YG + A F E+ L SV +N L+ L D
Sbjct: 340 PDLV-----SYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLD 394
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
R+ E K +G PD+ T+ ++ FC+ + A + EM + ++P+ ++
Sbjct: 395 VAMRLKDEMIK-HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453
Query: 223 VAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ G E K D +K M E G + YNV I L KL EA L+ +ML
Sbjct: 454 IVG---ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLY 510
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+ P+ VTY+ I+ G+ +A+ + M + G+ P+ Y +++ G +
Sbjct: 511 NGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKL 570
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
A+ E KG PN T +L+ GL K+ +A
Sbjct: 571 AILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQA 606
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 4/289 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ I+YG + A + M L + ++N L+ T + E +F E
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL- 368
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ + P + TYN +I C D A + EM + P+ +F V GF K
Sbjct: 369 RYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNL 428
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ M G++ Y RI KL ++A + +EML++G P+ +TY+ F
Sbjct: 429 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 488
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G K GN +EA + + M +GL P+ Y ++++ G A E ++KG
Sbjct: 489 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGI 548
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
P+ T L+ A ++ A + EK NV T+N + GL
Sbjct: 549 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL TYN I + + A ++ +M + P+ ++ +++
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 536
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ V Y V IHS + A EM KG+ PN +TY+ I G
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 596
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK ++A F+ M G+SPN Y ++ C G ++ AL K+ + + P+
Sbjct: 597 LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +SL+ L K+ + L
Sbjct: 657 SCTHRSLLKHLNKDYKLHVVRHL 679
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 35/326 (10%)
Query: 85 LSEANYFNGISQYLEEL-KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
LS+ F + +EE+ KT P+L + + ANM + AV EM ++ L
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIE----FP--------------------------- 172
F LL AL KE +VF + FP
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 173 --KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++PD+ + ++ + + + AY ++ +M ++ +PN + + L+ + E
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 231 KYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
K D +V MERYG ++ + Y I CK + ++LD+M KG+ P+ VTY
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ K FEE + M G P+ +Y ++ CK G+ + A+ E A
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEA 375
G P T ++ G + EA
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIK 178
Y A A +M + +V + L+ AL K E RVF+E + YG +
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCE 339
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D+ TY +I FC+ YS+L +M +K + P+ ++ ++ K+E++E+ ++
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
++ M+R G + +YNV I CKL + EA L +EM + G+ P T+ I GF
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA ++ M + G+ F+ P + T
Sbjct: 460 QGFLIEACNHFKEMVSRGI-------FS--------------------------APQYGT 486
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK---NVDTW 393
+KSL+ L K+ AK++ + K + NV W
Sbjct: 487 LKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAW 524
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 39/170 (22%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE K G PDL YN VI+ C+ + A + EM+ + P +F ++ GF
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 228 KEE-KYEDVNKVLQMMER-------YG-MKS----------------------------- 249
+ E N +M+ R YG +KS
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 250 -GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
VS + + IH+L EA + +M+ + P TY+ + G K
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 170/420 (40%), Gaps = 39/420 (9%)
Query: 15 SQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLL---KSESNPEKILEICRAAALTPES 71
SQ++H + S + P S + R + L KS +P+ L +
Sbjct: 422 SQQYHTFRPRRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLFNQYQQMGFK 481
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H D ++S + KL+ + F + L+ L+ E I YG++ M E AV
Sbjct: 482 H-DYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAVE 540
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI---------------------- 169
F+ M ++ +FN LL L + + +F
Sbjct: 541 LFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWL 600
Query: 170 ---EFPKTYGI---------KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E+ K + + KP + T+N +I C D A +L +M +K +PNA
Sbjct: 601 GKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAV 660
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G KY++ K++ M+ G K + + V + L + + ++K LL EM
Sbjct: 661 TYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEM 720
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ KP+ VTY+ I CK+G EA K M G PN++ Y MV C+ D+
Sbjct: 721 KRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDF 780
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
E L + G P + LV GL K+ A ++ + K K +++ W +
Sbjct: 781 EGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEAL 840
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + + V +N L+ L E +V +E + G +P+ TY ++ FC+
Sbjct: 719 EMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEM-QVGGCEPNAATYRMMVDGFCQV 777
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
D +L+ M P SF LV G K K + VL+ ME+ M+ + +
Sbjct: 778 EDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAW 837
Query: 255 NVRIHSLC 262
+ C
Sbjct: 838 EALVKDAC 845
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++ A T+ EM + + V +++++ AL A+ + V K G+ PD TYN
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYN 275
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C S A L +M ++PN ++ +L+ K + + K+ M +
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ ++ Y + E ALLD M+ G++P+ ++ I + K ++A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M GL+PN Y T++ +CK G + A+ + ++ I +G PN SL+ G
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Query: 366 LAGASKVSEAKELI 379
L K +A+ELI
Sbjct: 456 LCTCDKWDKAEELI 469
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
VR + D H FN L+ A + + VF + + +G+ P++ Y VI
Sbjct: 368 VRNGIQPDHH-------VFNILICAYAKQEKVDQAMLVFSKM-RQHGLNPNVVCYGTVID 419
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMMERYGMK 248
C+S A +M + + PN + +L+ G +K++ + +L+M++R G+
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR-GIC 478
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N I S CK + E++ L D M+ G+KP+ +TY+ I G C G +EA K
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + G+ P+ Y T++ C+ + AL KE ++ G PN T ++ GL
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598
Query: 369 ASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
+ + AKEL + + K + T+N I GL
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 149/366 (40%), Gaps = 43/366 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I L +A + + L + PD H Y + + A+
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG---YCSSGQPKEAI 291
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
T K+M + +V +++L+ L E +++F K G++PD+ TY +++
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQG 350
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ +++L M R I+P+ F L+ + K+EK + V M ++G+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC------------- 297
V Y I LCK +A ++M+ +G+ PN + Y+ I+G C
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 298 ----------------------KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
K+G E++K + +M G+ P+ Y T++ C G
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ A ++ G P+ T +L+ G S++ +A L +V + N+ T+N
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 395 EIEAGL 400
I GL
Sbjct: 591 IILQGL 596
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 3/238 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F LL L K + + + G PD+ +YN ++K C+ + S A +L M
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189
Query: 208 --DRKS-IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
DR P+ S+ ++ GF+KE + M G+ V Y+ I +LCK
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A +L+ M+ G+ P+ +TY+ ++G+C G +EA + M + G+ PN Y
Sbjct: 250 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
+++ ++CK G A +G P+ T ++L+ G A + E L+ L+
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD+ +YN V+ F + DS AYS EM + I P+ ++ +++A K + +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL M + G+ YN +H C + EA L +M S G++PN VTYS +
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+G EA+K + M+ GL P+ + Y T++ G + G P+
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 356 FTTMKSLVTGLAGASKVSEA 375
L+ A KV +A
Sbjct: 376 HHVFNILICAYAKQEKVDQA 395
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+++ YG ++ + A+ F++M + L ++ + +L+ L + + + +
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+E GI + +N +I + C+ + + M R +KP+ ++ L+ G
Sbjct: 470 LEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
K ++ K+L M G+K + Y I+ C++ + +A AL EM+S G+ PN +T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ + G AK+ Y ++ SG S Y +++ +CK + AL +
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAG 399
T ++ L ++ EAK+L GLV + T ++ N IE G
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KPD+ TYN +I C + A +LA M +KP+ ++G L+ G+ + + +D
Sbjct: 511 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G+ + YN+ + L R+ A AK L + G + TY+ ++G
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 630
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK+ +EA + ++ + + L + + M+ + K G + A A G VP+
Sbjct: 631 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD 690
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T + L + E +L
Sbjct: 691 VRTYSLMAENLIEQGSLEELDDL 713
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P++ TYN +++ + +++A + + + + S++ ++ G K ++
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ Q + ++ +N+ I +L K + EAK L + G+ P+ TYS
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ G+ EE + M +G S +S + ++V + + GD A
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 40/189 (21%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY- 309
V Y + I C+ + A L ++ KG + +++T++ + G C D +A
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 310 RIMSNSGLSPNSSVYFTMVYFMC------------------KGG-------DYETAL-GF 343
R M+ G P+ Y ++ +C +GG Y T L GF
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 344 CKES------------IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
KE + +G +P+ T S++ L A + +A E++ +VK +
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271
Query: 391 DTWNEIEAG 399
T+N I G
Sbjct: 272 MTYNSILHG 280
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 9/296 (3%)
Query: 113 HAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
H SI+ +G + + A+ F +M + +V +N ++ L +K
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+ K GI PD+ TYN +I C S S A +++ M ++ I P+ +F AL+
Sbjct: 207 DLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
KE + + + + M R + + Y++ I+ LC + EA+ + M+SKG P+
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VTYS I G+CK E K + MS G+ N+ Y ++ C+ G A +
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ G PN T L+ GL K+ +A ++ + K ++ T+N I G+
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ ++ F M + + S+ F+ LL A++ K Y V ++ E + GI +L T N
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW-EQMQMLGIPHNLCTCNI 121
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ FC S S A S L +M + +P+ +FG+L+ GF + ++ D + M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K V +YN I LCK ++ A LL+ M G+ P+ VTY+ I G C G + +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M+ + P+ + ++ K G A F +E I + P+ T L+ GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 367 AGASKVSEAKELIGLVKEK 385
S++ EA+E+ G + K
Sbjct: 302 CMYSRLDEAEEMFGFMVSK 320
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 129/280 (46%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ ++A+ M++ + V +N+L+ L + + + R+ K I PD+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR-EIYPDV 256
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N +I A + S A EM R+S+ P+ ++ L+ G + ++ ++
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V Y++ I+ CK +K L EM +G+ N+VTY+ I G+C+ G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A++ +R M G+ PN Y +++ +C G E AL + G + T
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 362 LVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
++ G+ A +V++A ++ L + ++ T+ + GL
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++EM L + ++ L+ L + E + +F F + G PD+ TY+ +I +C
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSKGCFPDVVTYSILINGYC 337
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM ++ + N ++ L+ G+ + K ++ + M G+ +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YNV +H LC K +A +L +M GM + VTY+ I G CK G +A Y +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ GL P+ Y TM+ + K G A ++ G +PN
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R M + ++ V FNAL+ A E + + E + + PD+ TY+ +I
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLI 298
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A + M K P+ ++ L+ G+ K +K E K+ M + G+
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y + I C+ K A+ + M+ G+ PN +TY+ ++G C +G E+A
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M +G+ + Y ++ MCK G+ A +G +P+ T +++ GL
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 369 ASKVSEAKELIGLVKE 384
EA L +KE
Sbjct: 479 KGLRREADALFRKMKE 494
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ + F L++ K +KY+ V + + M+ G+ + N+ ++ C+ + + A +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L +M+ G +P+ VT+ + GFC+ +A + M G PN +Y T++ +CK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
+ AL G P+ T SL++GL + + S+A ++ + K + +V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 393 WNEI 396
+N +
Sbjct: 259 FNAL 262
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 1/272 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ + M E ++H++ ++ ++ KD+ VF + K G
Sbjct: 492 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE-G 550
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +I AFC + A + EM + +P +F ++ GF K
Sbjct: 551 MKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSL 610
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V MM R G V +N I+ L + R+ +A +LDEM G+ N TY+ + G+
Sbjct: 611 EVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 670
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + N GL + Y ++ CK G ++AL KE A+ N
Sbjct: 671 ASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 730
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
L+ G A V EA +LI +K++ K
Sbjct: 731 FVYNILIDGWARRGDVWEAADLIQQMKKEGVK 762
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 121/302 (40%), Gaps = 1/302 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ + S+A + +E K N + I + Q E A +E
Sbjct: 381 VTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 440
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + ++ ++ T+ D K+ VF K G P + TY +I + +
Sbjct: 441 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRL-KECGFTPTVVTYGCLINLYTKVG 499
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A + M + +K N ++ ++ GF K + + + V + M + GMK V +YN
Sbjct: 500 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 559
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A + EM +P + T+ I GF K G+ + + + +M
Sbjct: 560 NIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRC 619
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P + ++ + + E A+ E G N T ++ G A +A
Sbjct: 620 GCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 679
Query: 376 KE 377
E
Sbjct: 680 FE 681
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 131/319 (41%), Gaps = 36/319 (11%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ E ++ R R + I Y E A+ ++M E + S+ ++ ++
Sbjct: 331 ETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGF 390
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK-- 213
+ A + + F E + + + Y ++I A C++ + A +++ EM+ + I
Sbjct: 391 SKAGNAEAADHWFDEAKRIHKTL-NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAP 449
Query: 214 ---------------------------------PNASSFGALVAGFYKEEKYEDVNKVLQ 240
P ++G L+ + K K +V +
Sbjct: 450 IAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 509
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+M+ G+K + Y++ I+ KL+ A A A+ ++M+ +GMKP+ + Y++ I FC G
Sbjct: 510 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMG 569
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
N + A + + M P + + ++ K GD +L G VP T
Sbjct: 570 NMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 629
Query: 361 SLVTGLAGASKVSEAKELI 379
+L+ GL ++ +A E++
Sbjct: 630 ALINGLVEKRQMEKAVEIL 648
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D+ TY ++KA C+S SA ++ EM ++I N+ + L+ G+ + +
Sbjct: 690 GLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 749
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M++ G+K + Y I + K A ++EM + G+KPN TY+ I G
Sbjct: 750 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 809
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD------YETALGFCKESIA 349
+ + E+A Y M GL P+ +VY ++ + Y + CKE +
Sbjct: 810 WARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVE 869
Query: 350 KGWVPNFTT 358
G + + T
Sbjct: 870 AGLIVDMGT 878
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 133/328 (40%), Gaps = 19/328 (5%)
Query: 48 LLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
++K P+ IL AA ++DR AI + E +++L+ RP
Sbjct: 546 MVKEGMKPDVILYNNIIAAFCGMGNMDR-----AIQTVKE----------MQKLRHRP-- 588
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
R I + ++ ++ F M +V FNAL+ L + ++ +
Sbjct: 589 -TTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEI 647
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
E G+ + TY ++++ + D+ A+ + + ++ + ++ AL+
Sbjct: 648 LDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACC 706
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + + V + M + +YN+ I + EA L+ +M +G+KP+
Sbjct: 707 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 766
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ FI K G+ A + M G+ PN Y T++ + E AL +E
Sbjct: 767 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 826
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEA 375
A G P+ L+T L + ++EA
Sbjct: 827 KAVGLKPDKAVYHCLLTSLLSRASIAEA 854
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 4/268 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ YG+ A TF+ M + + + +L+ A + +D +E + K G
Sbjct: 317 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKM-KEEG 375
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ L TY+ ++ F ++ ++ +A E R NAS +G ++ + E
Sbjct: 376 IEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 435
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ ME G+ + +++Y+ + + + + + G P VTY I +
Sbjct: 436 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLY 495
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G +A + R+M G+ N Y M+ K D+ A ++ + +G P+
Sbjct: 496 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 555
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
+++ G + A I VKE
Sbjct: 556 ILYNNIIAAFCGMGNMDRA---IQTVKE 580
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 1/218 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP + ++K + D A M + I P + + +L+ + E+
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M+ G++ + Y+V + K A DE N+ Y IY C
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ N E A+ R M G+ ++Y TM+ D + L K G+ P
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVV 486
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWN 394
T L+ K+S+A E+ ++KE+ K N+ T++
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 524
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G +PD Y +I ++ A + A M + K +A ++ L+ GF +++K +
Sbjct: 341 HGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHE 400
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L+ M+ G++ V YN + LCK + LL M+ G +P+ VT+ ++
Sbjct: 401 AYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVH 460
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G+CK G +EA + +R M + + PN+ +Y T++ F+CK + + A+ E K
Sbjct: 461 GYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPA 520
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGLPQ 402
N TT +L+ GL +A EL+ ++ E+ T N T + + LP+
Sbjct: 521 NVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPE 569
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY+ + AF ++ A + EM +P+A + +++G + + D M
Sbjct: 314 TYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASM 373
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
++ G K YN+ I C+ +K EA LL+EM G++P+ TY+ + G CK G+F
Sbjct: 374 KKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDF 433
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+ M + G P+ + T+V+ CK G + AL + PN +L
Sbjct: 434 SAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTL 493
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ L + +V A +L ++EK NV T+N + GL
Sbjct: 494 IDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGL 532
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 18/291 (6%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL--RHSVGAFNALLLAL 155
L L+ P L +E LY HA H L RH + +ALLL+
Sbjct: 52 LSLLRLSPGLASE--------LYALIAEPSHAFTPASLASLHSLAARHRIPPPSALLLSK 103
Query: 156 TIAK--DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
+ + E + + PD+ +N ++ A + + + M S+K
Sbjct: 104 LVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVK 163
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYG--MKSGVSMYNVRIHSLCKLRKCAEAK 271
P+ ++G L+ G K D KVL M G + +++ N + LCK+ + +A
Sbjct: 164 PDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI 223
Query: 272 ALLDEMLS--KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
+DE + G PN+VTY+ FC+ G+ A K M G++PN T++
Sbjct: 224 IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIG 283
Query: 330 FMCKGGDYETALGFCKE--SIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+C+ G AL F +E ++ N T +L + + V A EL
Sbjct: 284 GLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMEL 334
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA A T M + + A+N L+ K E + E K G++PD+
Sbjct: 359 QAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEM-KGVGLQPDV 417
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C++ D S+ +L M +P+ +FG LV G+ K K ++ ++ +
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRS 477
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ ++ +YN I LCK R+ A L DEM K + N TY+ + G
Sbjct: 478 MDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKM 537
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
E+A + M +PN ++ ++ + G+ E
Sbjct: 538 AEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG-------- 225
+G P+ TYN + AFC D A I+A M+++ + PN + ++ G
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292
Query: 226 ----FYKEEK-------------------YEDVNKVLQMMERY------GMKSGVSMYNV 256
F++E++ + N V ME + G + MY
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I L + + +A M G K ++ Y+ I GFC+ EA + M G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
L P+ Y T++ +CK GD+ I G P+ T +LV G A K EA
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472
Query: 377 ELIGLVKE-KFTKNVDTWNEI 396
+ + E + N +N +
Sbjct: 473 RIFRSMDEARIQPNTVIYNTL 493
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 6/277 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A + M + +N L L A E ++ E + P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN ++ A + SS A ++L EM K +K + + +V G +E + E+ L
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MM G+ V YN I + CK R A+A L+DEM+ G+K ++ T + +Y CK+
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+EEA++ R G P+ Y T++ K E AL E + P+ T
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTY 529
Query: 360 KSLVTGLAGASKVSEA----KELI--GLVKEKFTKNV 390
+L+ GL K++EA EL+ GLV + T N+
Sbjct: 530 NTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNI 566
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 44/316 (13%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
H+I++ G + E A+ K M E L V +N L+ A A++ + + E
Sbjct: 389 HNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMV 448
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++ G+K D T N ++ C+ A +L ++ P+ S+G ++A ++KE K
Sbjct: 449 RS-GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + M + + + YN I LC + K EA L+E++ KG+ P+ TY+
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV----------------------------- 323
I+ +CK+G+ E+A +F+ M + P+
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK 627
Query: 324 ------YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
Y T++ +CK GD +TAL F + A+G P+ T +++ L+ A + EA+
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687
Query: 378 LI------GLVKEKFT 387
++ G + E+F+
Sbjct: 688 MLHKLDESGKLSERFS 703
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 36/241 (14%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G+ PD+ TYN ++KA C A ++LA M ++ I P +++ LV+ + + +
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLC-------------------------------- 262
V++ M +G + + YNV LC
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358
Query: 263 ----KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
K ++ ++A LL+EM KG+K + VT++ + G C++G EEA ++M+ GL+
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y T++ CK + A E + G + T+ +L+ L + EA+EL
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478
Query: 379 I 379
+
Sbjct: 479 L 479
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 36/269 (13%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E + G+K L T+N V+K C A L M + + P+ ++ L+ +
Sbjct: 373 LLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC 432
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL------------- 274
K ++ M R G+K N +++LCK ++ EA+ LL
Sbjct: 433 KARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEV 492
Query: 275 ----------------------DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
DEM + + P+ TY+ I G C G EA +
Sbjct: 493 SYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNEL 552
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
GL P+ + Y +++ CK GD E A F + + + P+ T +L+ GL K+
Sbjct: 553 MKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKL 612
Query: 373 SEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+A +L EK K +V T+N + L
Sbjct: 613 EKAIKLFESWAEKGKKVDVITYNTLIQAL 641
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYS--ILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
++P L N V+ A S +S S + + + PN +F LV + D
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLAD 228
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
L M+ +G+ V YN + + C+ EA+ LL M +G+ P TY+ +
Sbjct: 229 ALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVS 288
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV- 353
+ + G ++A M+ G P+ Y + +C+ G + A E V
Sbjct: 289 AYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS 348
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
P+ T +LV + S+A L+ +++K K ++ T N + GL
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGL 396
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 37/208 (17%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + +M E+ + V N L+ L + ++ ++F + + G K D+ TYN
Sbjct: 578 EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK-GKKVDVITYNT 636
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+A C+ D +A A+M+ + ++P+A ++ +++ + + E+ +L ++ G
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Query: 247 -----------------MKSG-------------------VSMYNVRIHSLCKLRKCAEA 270
+K+G YN + LC + EA
Sbjct: 697 KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEA 756
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCK 298
KA+LDEM+ KGM +S TY + G K
Sbjct: 757 KAVLDEMMQKGMSVDSSTYITLMEGLIK 784
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 7/313 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F + KL +A F G ++E L +P++ + H Y E A R
Sbjct: 180 IVFDLLEGKLKKAREFIG---FMEGLGFKPNVVSYNTIIHG---YSSRGNIEGARRILDA 233
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +L+ + +E +F + + G+ P+ TYN +I +C
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVPNAVTYNTLIDGYCNKG 292
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
D A+S EM +K I P+ S++ LV + E + + + +++ M + G+ YN
Sbjct: 293 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 352
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I+ + A L +EMLSKG++P VTY+ IY + +EA + + +
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G+SP+ ++ M+ C G+ E A KE K P+ T +L+ G KV EA
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472
Query: 376 KELIGLVKEKFTK 388
+ L+ +K + K
Sbjct: 473 RMLLDEMKXRGIK 485
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A EM + + + +L+ L+ KE +F E G+ P
Sbjct: 358 YSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF-EKILDQGVSP 416
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +N +I C + + A+ +L EMDRKS+ P+ +F L+ G +E K E+ +L
Sbjct: 417 DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G+K YN I + +A + DEMLS G P +TY+ I CK+
Sbjct: 477 DEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKN 536
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
+ A++ + M N G+SP+ S Y +++ M
Sbjct: 537 QEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A EM + + SV +N L+ AL + E + E K GI PD TYN
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK-GIIPDAITYNI 353
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I + ++ A+ + EM K I+P ++ +L+ + + ++ + + + + G
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V M+N I C A LL EM K + P+ VT++ + G C++G EEA+
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M G+ P+ Y T++ + GD + A E ++ G+ P T +L+ L
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCL 533
Query: 367 AGASKVSEAKELIGLVKEKFTKNV 390
+ A+EL+ KE K +
Sbjct: 534 CKNQEGDLAEELL---KEMVNKGI 554
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 5/268 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E F+++ + V +++ L+ LT A +E +F K G D
Sbjct: 36 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM-KQRGFALDA 94
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN V+ FC+S AY L EM K + P +++G+++ G K ++ ++ + +
Sbjct: 95 RAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 154
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+ G++ V +Y+ I K+ + EA +L+EM+ KG+ PN T++ + K
Sbjct: 155 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEE 214
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA ++ M SPN+ Y ++ +C+ Y A F +E +G VPN T +
Sbjct: 215 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 274
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++GLA +++A L E+F N
Sbjct: 275 MISGLAKVGNITDACSLF----ERFKAN 298
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 3/312 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++SI I+ L++A S +K R + R + + + ++ + A
Sbjct: 58 DVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEAL 117
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + +V + +++ L E +F E K+ GI+ ++ Y+ +I F +
Sbjct: 118 EEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLF-EEAKSKGIELNVIVYSSLIDGFGK 176
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
AY IL EM +K + PN ++ +L+ K E+ + Q M+
Sbjct: 177 VGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 236
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA-KKFYRIM 312
Y++ I+ LC+++K +A EM +G+ PN VTY+ I G K GN +A F R
Sbjct: 237 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFK 296
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+N G+ P+++ + ++ M A +E+ +G N SL+ L A +
Sbjct: 297 ANGGI-PDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECI 355
Query: 373 SEAKELIGLVKE 384
+A + +++E
Sbjct: 356 EQAAVVGAVLRE 367
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E + FKEM+ + + N + + A D ++ + +F E K YG PD+ +Y+
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF-EDIKGYGFLPDVRSYSI 64
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I ++ + SI M ++ +A ++ A+V GF K K + + L+ M+
Sbjct: 65 LIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKH 124
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V+ Y I L K+ + EA L +E SKG++ N + YS I GF K G +EA
Sbjct: 125 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA- 183
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y I+ +E + KG PN T SL+ L
Sbjct: 184 --YLIL--------------------------------EEMMKKGLAPNVYTWNSLMDAL 209
Query: 367 AGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
A +++EA +KE K + N T++ + GL
Sbjct: 210 VKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 244
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 7/313 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+ + ++ IN+L F+ + ++ L N + + I E A+ F
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M + +V +N L+ + R+ ++ K G +PD TYN ++ F +
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL-LDLMKENGCEPDEWTYNELVSGFSK 490
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
SA EM + PN S+ AL+ G K+ K + +L+ ME G V
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I+ L K + +EA+ + D+M+ +G+ PN +TY+ I G C++G + A K + M
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK-GWVPNFTTMKSLVTGLAGASKV 372
PN Y +++Y +C+ G + A E +++ G P T +LV+GL +
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEA-----ERMSEIGCEPTLDTYSTLVSGLCRKGRF 665
Query: 373 SEAKELIGLVKEK 385
EA++L+ +KE+
Sbjct: 666 YEAEQLVKDMKER 678
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 47/347 (13%)
Query: 99 EELKTRPDLQNE------RFHAHS----IILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
EE++ D NE F +S +I + M E A +K+M ++ S+ F
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N L+ L+ +E + + + + Y + PD+ TY +I C + + A+ + M
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQ-YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC------ 262
++ PN+ ++ L+ G E + ++ +L+ M G++ V Y + I +LC
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 263 -----------------------------KLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+L K A L +ML +G+ PN+VTY+ I
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
C G F A K + M G N+ Y ++ +C GGD E A+ ++ + G +
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD-TWNEIEAG 399
P T +L+ G V+ A L+ L+KE + + T+NE+ +G
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 125/266 (46%), Gaps = 6/266 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ K M+E +V ++NA++ L+ + E +++ + + G+ P++ TY +I
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ-GLLPNVITYTTLI 590
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + + A+ I +M+++ PN ++ +L+ G +E K ++ + M G +
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCE 646
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ + LC+ + EA+ L+ +M +G P+ Y + CK+ + A K
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 706
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + G + S+Y ++ +CK G E A + K W + LV GL
Sbjct: 707 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTW 393
++ +L+ +++ K FT N+ T+
Sbjct: 767 EGELDLCMKLLHIMESKNFTPNIQTY 792
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 26/285 (9%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALL----------LALTIAKDYKEVKRVFIEFPKTYG 176
E A F+EM E L + ++ AL+ +AL++ K +E+ G
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM-----------G 543
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
P++++YN VI + + S A I +M + + PN ++ L+ G + + +
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ ME+ + Y+ I+ LC+ K EA + M G +P TYS + G
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGL 659
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ G F EA++ + M G P+ +Y++++ CK + + AL AKG+ +
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ ++L+ L A +V EA+ L ++++++ + W + GL
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 4/290 (1%)
Query: 114 AHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S ++ G N + A+ +EM E + +V + + AL + +E +
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K G +P++ TY +I A + +M ++ + PN ++ AL+ +
Sbjct: 330 KKR-GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ K+ ME +G + YN I LC +A L ++ML G P VTY+
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G+ GN A + +M +G P+ Y +V K G E+A + +E + G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
PN + +L+ G + KV A L+ ++E NV+++N + GL
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ TYN +I C S+A I M+ N ++ ++ G E
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M + G V YN I+ A LLD M G +P+ TY+ + G
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K G E A +++ M GL+PN Y ++ K G + AL K G PN
Sbjct: 488 FSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +++ GL+ ++ SEA+++ +V++ NV T+ + GL
Sbjct: 548 VESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 5/251 (1%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++ IN LS+ N F+ + +++ + L N + I + T+ A + F +M
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
++ K ++ +++L+ L E +R+ G +P LDTY+ ++ C
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQEGKADEAERM-----SEIGCEPTLDTYSTLVSGLCRKGR 664
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A ++ +M + P+ + +L+ K + + K+ +E G + +S+Y
Sbjct: 665 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRA 724
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I +LCK + EA+AL D ML K + + ++ + G K+G + K IM +
Sbjct: 725 LICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKN 784
Query: 317 LSPNSSVYFTM 327
+PN Y +
Sbjct: 785 FTPNIQTYVIL 795
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S L+ K E E + + M G++ + +N I+ L K K EA+ +L ++
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ P+ TY+ I G C++ N + A + M G PNS Y T++ +C G
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
+ AL +E I KG P T +T L EA EL+ +K++ + NV T+ +
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 397 EAGL 400
+GL
Sbjct: 345 ISGL 348
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 171/357 (47%), Gaps = 3/357 (0%)
Query: 26 SILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL 85
S +S+ + P T + ++L+K E +P++ L+I A+ + + +S+ ++ L
Sbjct: 41 SSISTMETNPKTKFISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNL 100
Query: 86 SEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHS 144
F + L ++K E + + + + ++ + + F + +++ S
Sbjct: 101 VRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPS 160
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
+ A + L L + + +++ + ++P+ +N ++K C++ D SA+ ++
Sbjct: 161 LNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVV 220
Query: 205 AEMDRKSIK-PNASSFGALVAGFYKEEKYEDVNKVLQ-MMERYGMKSGVSMYNVRIHSLC 262
EM R I PN+ ++ L+ + + + ++ ++ + M+ + G+ ++NV I+ C
Sbjct: 221 EEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFC 280
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ + AK +LD M G PN YS + GFCK+G +EAK+ + + +GL ++
Sbjct: 281 RSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTV 340
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
Y T++ +C+ G+ + A+ E A + T ++ GL+ + EA +++
Sbjct: 341 GYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQML 397
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVG-AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A R +EM + + ++ L+ L KE +F + GI PD +N
Sbjct: 214 DSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFN 273
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC S + A IL M + PN ++ AL+ GF KE K ++ +V +++
Sbjct: 274 VMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKT 333
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K Y ++ LC+ + EA LL EM + + +++TY+ + G +G EEA
Sbjct: 334 GLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEA 393
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ G+ N Y ++ +C G+ E A+ F +G P+ T LV
Sbjct: 394 LQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVR 453
Query: 366 L--AGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
L +G +++ + LIG + +W +
Sbjct: 454 LCESGNTEIG-VRVLIGFLGIGLIPAPKSWGAV 485
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ EM + R +N +L L+ +E ++ ++ G+ + +Y
Sbjct: 356 DEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQW-GCEGVHLNKGSYRI 414
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ A C + + A L+ M ++ I P+ +++ LV + E +VL G
Sbjct: 415 ILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIG 474
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+ + + S+CK RK LLD + S
Sbjct: 475 LIPAPKSWGAVVESICKERKLVHVFELLDSLAS 507
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL YN +I C + A ++L M RK I PN +F LV F KE K
Sbjct: 178 GIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRA 237
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G++ V YN I C L + +A + + M+ KG+ PN VTYS I+G
Sbjct: 238 KTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHG 297
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK N +A M N+GL+ + + T++ CK G E A+ +PN
Sbjct: 298 WCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPN 357
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T ++ GL SEA L + K N+ T+N + G+
Sbjct: 358 LQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGM 403
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
L Y+ ++ + C+ A + + M K I+P+ ++ +L+ G ++ + +L
Sbjct: 148 LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M R G+ V +NV + + CK K + AK ++ M+ G++P+ VTY+ I G C
Sbjct: 208 NMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLS 267
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+A K + +M + GL PN Y ++++ CK + A+ E + G + T
Sbjct: 268 QMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWS 327
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
+L+ G A + A EL + E N+ T I GL
Sbjct: 328 TLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGL 368
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I+ + G+KPD+ T VI C + +S+L M + ++P +F L+ G
Sbjct: 29 LIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLC 88
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN-S 286
E + +E G +S + I+ LCK+ A A + L+++ + +
Sbjct: 89 AEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLL 148
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+ YS + CKDG A F+ M+ G+ P+ Y ++++ +C G + A
Sbjct: 149 IAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGN 208
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ KG +PN T LV K+S AK ++ +V +V T+N + +G
Sbjct: 209 MMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISG 262
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 129/332 (38%), Gaps = 43/332 (12%)
Query: 89 NYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
N+F+G++ +PDL H + +G+ N A M + +V F
Sbjct: 169 NFFSGMTCK----GIQPDLVAYNSLIHGLCSFGRWN---EATTLLGNMMRKGIMPNVQTF 221
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N L+ K + F G++PD+ TYN VI C S + A + M
Sbjct: 222 NVLVDNFCKEGKISRAKTIMC-FMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMI 280
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK----- 263
K + PN ++ +L+ G+ K VL M G+ V ++ I CK
Sbjct: 281 HKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPE 340
Query: 264 -----------------LRKCA-------------EAKALLDEMLSKGMKPNSVTYSHFI 293
L+ CA EA +L +M ++ N VTY+ +
Sbjct: 341 AAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVL 400
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G C G F +A++ + + + G+ + Y TM+ +CK G + A + G
Sbjct: 401 DGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCP 460
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
PN T LV GL +S + + + L+K K
Sbjct: 461 PNEFTYNVLVRGLLQRYDISRSTKYLMLMKGK 492
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 8/273 (2%)
Query: 94 ISQYLEELKTRPDLQ--NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
I ++ + PD+ N H L Q N AV+ F+ M L +V +++L
Sbjct: 240 IMCFMVHVGVEPDVVTYNSVISGHC--LLSQMN---DAVKVFELMIHKGLLPNVVTYSSL 294
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ ++ + V E G+ D+ T++ +I FC++ +A + M
Sbjct: 295 IHGWCKTRNINKAIFVLDEMVNN-GLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
PN + ++ G +K + + + + + ME+ ++ + YN+ + +C K +A+
Sbjct: 354 QLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAR 413
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
L + SKG++ + V Y+ I G CK+G ++A+ M +G PN Y +V +
Sbjct: 414 ELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ D + + KG + TT + L++
Sbjct: 474 LQRYDISRSTKYLMLMKGKGLSADATTTELLIS 506
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P F L K + Y +++ G+K V + I+ LC L+ ++
Sbjct: 5 PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L M G++P VT++ I G C +GN A +F + + G NS + T++ +CK
Sbjct: 65 LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124
Query: 334 GGDYETALGF------------------------CKESI------------AKGWVPNFT 357
GD A+ + CK+ + KG P+
Sbjct: 125 VGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLV 184
Query: 358 TMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
SL+ GL + +EA L+G ++++ NV T+N
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFN 222
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 10/326 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + + L +A+ + +++EE++ NE +++ + + Q + +R F
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251
Query: 134 KEMDEHKLRH-SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+E K A+ L AL A Y + R +E + G+ PD+ TY+ +I F
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKA-GYLDRARKSVEELRQSGVVPDVVTYSMLINTFA 310
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ ++ +L +M R +KP+ ++ L+ KE K++D ++L++ME G V
Sbjct: 311 RAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN + LCK K E + + ML P+ VTYS + G K G + A K + ++
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELI 430
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGF---CKESIAKGWVPNFTTMKSLVTGLAGA 369
+S P+++ Y ++ +C+ G E A G + ++A + + LV L A
Sbjct: 431 KSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICR--ALAGLVAALCDA 488
Query: 370 SKVSEAKELIGLVKE---KFTKNVDT 392
+ A+ ++ + +E + TK+ DT
Sbjct: 489 KRTDSARRIVEVARERGHRVTKSGDT 514
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 150/367 (40%), Gaps = 39/367 (10%)
Query: 71 SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
+ +D AF++ KL + F+ + + L +R + E + + A M A+
Sbjct: 15 AKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQAL 74
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+E+ +V +N ++ L A + +V + + I P++ TY ++
Sbjct: 75 ELVRELS-GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTYTILLNG 132
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C S+ + A + EM R KPN ++G L+ + + ++ +V+ + +
Sbjct: 133 LCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF-------------- 296
V + LCK + +A ++EM G++PN VTYS+ ++GF
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252
Query: 297 ----------------------CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
CK G + A+K + SG+ P+ Y ++ +
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTW 393
G ++ +L ++ G P+ T +L+ L K +A L+ L++ + NV T+
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 394 NEIEAGL 400
N + GL
Sbjct: 373 NSVMDGL 379
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 42/243 (17%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHA 129
L+ A+ ++ L +A Y + + +EEL+ PD ++ Y
Sbjct: 262 LEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD----------VVTYSM------L 305
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ TF G F+A L +E + G+KPD+ TY+ +I
Sbjct: 306 INTFAR---------AGQFDASL--------------ELLEDMRRNGVKPDVVTYSTLIN 342
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A+ +L M+ PN ++ +++ G K K ++V++V +MM +
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V Y++ ++ L K A L + + S P++ YS I C+ G EEA Y
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY 462
Query: 310 RIM 312
M
Sbjct: 463 HGM 465
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 240 QMMERYGMKSGVSM----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ER +++G + + + L + K +E L + S+G+ TY + G
Sbjct: 4 KLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDG 63
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G +A + R +S +P +Y ++ +C+ A ++ + + VPN
Sbjct: 64 LCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T L+ GL ++K A+E+
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREV 145
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 9/340 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
RA A SH + + I+KL F I + L+++K L E + YG+
Sbjct: 88 RAGAQKGYSHTFDACY-LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGK 146
Query: 123 ANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A + A R +M + + ++N +L L + VF + + G+ P +
Sbjct: 147 AGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDM-LSRGVSPTV 205
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+ V+KA C S+ SA S+L +M + PN+ + L+ + + + ++L+
Sbjct: 206 YTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLED 265
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + V +N IH LC+ + EA LLD ML +G +++TY + ++G C+ G
Sbjct: 266 MFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES-IAKGWVPNFTTMK 360
+EA+ + N PN+ +Y T++ G +E A + + G+ P+ T
Sbjct: 326 VDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381
Query: 361 SLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
++ GL + A EL+ +V ++F NV T+ + G
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ + ++E K + G +PD T+N +I + SA +L EM
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
K +PN ++ L+ GF K+ + E+ +++ M G+ YN I +LCK
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA L EM KG KP+ T++ I G CK+ EEA Y M G+ N+ Y T+
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523
Query: 328 VY-----------------------------------FMCKGGDYETALGFCKESIAKGW 352
V+ +CK G E LG +E + KG
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583
Query: 353 VPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
P + L++GL KV++A K L ++ T ++ T+N + GL
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D F+I I+ L + Y + L E+ + N + I + + E A
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M L + +N L+ AL + +E ++F E G KPD+ T+N +I C+
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGK-GCKPDIYTFNSLINGLCK 494
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A S+ +M + + N ++ LV F + + K++ M G
Sbjct: 495 NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNIT 554
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I +LCK + L +EML KG+ P ++ + I G C+ G +A KF + M
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL+P+ Y +++ +CK G + A + ++G P+ T +L++ +
Sbjct: 615 HRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
+A L+ V F N TW+
Sbjct: 675 DACLLLYKGVDSGFIPNEVTWS 696
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I A C+ + A + EM K KP+ +F +L+ G K K E+ + M
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN +H+ +A L+DEML +G +++TY+ I CK G E
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ + M G+ P ++ +C+ G AL F ++ I +G P+ T SL+
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL V EA L L E + T+N +
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTL 663
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 46/323 (14%)
Query: 120 YGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT---- 174
YG+A++ E A+ F M DE + R +V +FN++L + + +EF +
Sbjct: 109 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECGVGG 164
Query: 175 -YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
I P++ ++N VIKA C+ A + EM + +P+ ++ L+ G KE++ +
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ +L M+ G +NV I+ LCK L+D M KG PN VTY+ I
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG------------------ 335
G C G ++A M S PN Y T++ + K G
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344
Query: 336 --DY---------------ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+Y E A+G K+ + KG PN +L+ GL K+ EAKE+
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404
Query: 379 IG-LVKEKFTKNVDTWNEIEAGL 400
+ +V + T N T++ + G
Sbjct: 405 LCEMVNKGCTPNAFTYSSLIKGF 427
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 11/305 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYG--QANMTEHAV 130
L+F++ I + + + + E+ K PD+ + ++ G + + + AV
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV-----FTYCTLMDGLCKEDRIDEAV 227
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
EM S FN L+ L D V ++ ++ G P+ TYN +I
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL-VDNMFLKGCVPNEVTYNTIING 286
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C A S+L M PN ++G L+ G K+ + D +L +E G +
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y+ I L K K EA L +M+ KG +PN V YS I G C++G +EAK+
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G +PN+ Y +++ K G+ + A+ KE VPN L+ GL
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466
Query: 371 KVSEA 375
K+ EA
Sbjct: 467 KLREA 471
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 24/245 (9%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ Y+ +I C A IL EM K PNA ++ +L+ GF+K +
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + M + Y+V IH LC+ K EA + ML +G++P+ V YS I+G
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496
Query: 296 FCKDGNFEEAKKFYRIM--SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
C G+ E K + M S P+ Y ++ +CK A+ + +G
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 556
Query: 354 PNFTT---------------------MKSLVTGLAGASKVSEAKELIGLVKEKF-TKNVD 391
P+ T + LV L ++ A ++I ++ +KF N
Sbjct: 557 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 616
Query: 392 TWNEI 396
TW I
Sbjct: 617 TWERI 621
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 137/348 (39%), Gaps = 73/348 (20%)
Query: 71 SHLDRLAFSIAI-NKLSEANYFNGISQ---------YLEELKTRPDLQNERFHAHSIILY 120
S LDR+ S + N ++ NG+ + L L+ R NE +A+S ++
Sbjct: 298 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE--YAYSTLIS 355
Query: 121 G--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
G + +E A+ +K+M E + ++ ++AL+ L E K + E G
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK-GCT 414
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+ TY+ +IK F ++ +S A + EM + + PN + L+ G ++ K + +
Sbjct: 415 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 474
Query: 239 LQMMERYGMKSGV----SM---------------------------------YNVRIHSL 261
M G++ V SM YN+ + +L
Sbjct: 475 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 534
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF------CKDGN--FEE--------- 304
CK + A LL+ ML +G P+ +T + F+ +DG +E
Sbjct: 535 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQ 594
Query: 305 ----AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
A K +M L PN+S + ++ +CK + + C S+
Sbjct: 595 RIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSL 642
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 6/326 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEM 136
++ IN A ++L L R L + S +L Y + + HA R F M
Sbjct: 77 YTTLINAYCHAGDLPAAKRHLSSL-LRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCESS 195
+ + + ALL L A +E VF +P G PD Y+ ++ C +
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPD--GCAPDSHVYSIMVHGLCGAG 193
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A ++L + K PN + + AL+ G+ E + + M+ G V Y
Sbjct: 194 RAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYT 253
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I CK K A L M+ G+ PN VTY+ I G C +G+ E A + M
Sbjct: 254 QLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEAC 313
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL+PN ++ +CK G E A F + KG N S++ L + K A
Sbjct: 314 GLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGA 373
Query: 376 KELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ ++ E F + ++ + GL
Sbjct: 374 HNLMQKIITEGFVPDAHMYSSLIDGL 399
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 7/306 (2%)
Query: 62 CRAAALTPESHLDRLAFSIA--INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL 119
CR L P+ R F+ A + L A + PD H +SI++
Sbjct: 129 CRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGM--WPDGCAPDSHVYSIMV 186
Query: 120 YG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+G A AV + +V +NAL+ D + +F ++ G
Sbjct: 187 HGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM-QSKGC 245
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P++ TY ++I FC+S A + + M + PN ++ L+ G E E +
Sbjct: 246 LPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFR 305
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L ME G+ V I +LCK + EA+ L ++ KG+K N V Y+ I C
Sbjct: 306 LLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALC 365
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G F+ A + + G P++ +Y +++ +C+ A+ + I G N
Sbjct: 366 KSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAV 425
Query: 358 TMKSLV 363
L+
Sbjct: 426 PFTILI 431
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 1/275 (0%)
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
++++ L N R + I + ++ E A+ + M E L +V + L+ ++
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQG-QCSEG 298
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ E + + G+ P+ T +I A C+ A L + +K IK N +
Sbjct: 299 HLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYT 358
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
+++ K K++ + ++Q + G MY+ I LC+ K EA +LL++M+
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIES 418
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++ N+V ++ I ++ + K M+ +G+ P+ Y + C+ G E A
Sbjct: 419 GVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDA 478
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ I G PN TT +L+ G A VS+A
Sbjct: 479 ESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQA 513
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 3/243 (1%)
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ ++ GQ + EHA R M+ L + L+ AL +E ++ F+
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQ-FLGSL 345
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
GIK + Y +I A C+S A++++ ++ + P+A + +L+ G +E K
Sbjct: 346 VQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKL 405
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ +L M G+++ + + I + + K + D M + G+KP+ VTY+ F
Sbjct: 406 LEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVF 465
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I +C+DG E+A+ M + G+ PN + Y T++ G A K I G
Sbjct: 466 IRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGC 525
Query: 353 VPN 355
PN
Sbjct: 526 KPN 528
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 148/351 (42%), Gaps = 26/351 (7%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
++++ ++ I+ L ++ F+G ++++ T + + ++ I + N A+
Sbjct: 352 VNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISL 411
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK----RVFIEFPKTYGIKPDLDTYNRVI 188
+M E ++ NA+ + I K +E + ++ + G+KPD+ TY I
Sbjct: 412 LNDMIESGVQA-----NAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+++C+ A S++ +M ++PN +++ L+ G+ L+ M G K
Sbjct: 467 RSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCK 526
Query: 249 SGVSMYNVRIHSLCK-------------LRKCAEAKAL---LDEMLSKGMKPNSVTYSHF 292
Y V + L K L K + K L L+E++ S Y F
Sbjct: 527 PNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCF 586
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I K EEAK F M ++ L+P+ VY M+ + + AL F + + +
Sbjct: 587 IRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNY 646
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+P + + ++ L AK + G ++ +++ ++ W + GL Q
Sbjct: 647 LPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQ 697
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 91/239 (38%), Gaps = 22/239 (9%)
Query: 103 TRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
RP+L ++ ++ G AN+ A + K M ++ + + ++ LL L
Sbjct: 490 VRPNLTT-----YNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS 544
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS---------------SSAYSILA 205
Y ++ I K +K + VIK C S+ A S L
Sbjct: 545 YHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLV 604
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M ++ P+ + ++ Y+ + ++ + L M + + Y I +LC+
Sbjct: 605 GMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG 664
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
AK++ ++LSK + + + I G + GN + + M P S++Y
Sbjct: 665 SFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIY 723
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I +Y + A+ K M ++H++ ++ L+ KD+ VF + K G
Sbjct: 476 INMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKD-G 534
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +IKAFC + A ++ EM ++ +P + +F ++ GF + +
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRAL 594
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ MM R G V +N + L + RK +A +LDEM G+ P+ TY+ ++G+
Sbjct: 595 EIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGY 654
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ M N GL + Y ++ CK G ++AL +E A+ N
Sbjct: 655 AALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNT 714
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
L+ G A + EA +L+
Sbjct: 715 FVYNILIDGWARRGDIWEAADLM 737
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 7/291 (2%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHS----IILYGQANMTE--HAVRTFKEMDEHKLRHS 144
F G+ + ++Q ER S I++G A E A+ F M +
Sbjct: 549 FCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT 608
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V FNAL+L L + ++ + E G+ PD TY ++ + D+ A+
Sbjct: 609 VHTFNALVLGLVEKRKMEKAVEILDEMALA-GVSPDEHTYTTIMHGYAALGDTGKAFEYF 667
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+M + ++ + ++ AL+ K + + V + M + +YN+ I +
Sbjct: 668 TKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARR 727
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
EA L+ +M +G++P+ TY+ FI CK G+ A K M +G+ PN Y
Sbjct: 728 GDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTY 787
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
T+++ E AL +E G P+ L+T L + V+EA
Sbjct: 788 TTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEA 838
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 1/302 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI + ++ + ++ K R N + + I Y QA + A +E
Sbjct: 365 VTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVRE 424
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + ++ ++ T+ ++ ++ VF K G P + TY +I + +
Sbjct: 425 MEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL-KECGFAPSVITYGCLINMYTKIG 483
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A + M IK N ++ L+ GF K + + + V + + + G+K V +YN
Sbjct: 484 KVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYN 543
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A ++ EM + +P S T+ I+GF + G A + + +M S
Sbjct: 544 NIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 603
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P + +V + + E A+ E G P+ T +++ G A +A
Sbjct: 604 GCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKA 663
Query: 376 KE 377
E
Sbjct: 664 FE 665
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI LD Y+ ++ + + + + P+ ++G L+ + K K
Sbjct: 429 GIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKA 488
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V +MM+ G+K + Y++ I+ KL+ A A+ ++++ G+KP+ V Y++ I
Sbjct: 489 LEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKA 548
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC GN + A + M P S + +++ + G+ AL G +P
Sbjct: 549 FCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT 608
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T +LV GL K+ +A E++
Sbjct: 609 VHTFNALVLGLVEKRKMEKAVEIL 632
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I A+C++ + A +++ EM+ + I + ++ G+ E V + ++
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G V Y I+ K+ K ++A + M S G+K N TYS I GF K ++
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A + + GL P+ +Y ++ C G+ + A+ KE + P T ++
Sbjct: 522 NAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPII 581
Query: 364 TGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
G A A ++ A E+ +++ V T+N + GL
Sbjct: 582 HGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGL 619
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 9/259 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+I ++ R + P H F+ + L E + L+E+ +E H ++
Sbjct: 595 EIFDMMRRSGCIPTVH----TFNALVLGLVEKRKMEKAVEILDEMALAGVSPDE--HTYT 648
Query: 117 IILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
I++G A + T A F +M L+ V + ALL A + + V E
Sbjct: 649 TIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM-NA 707
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
I + YN +I + D A ++ +M+++ ++P+ ++ + + K
Sbjct: 708 QKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLR 767
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
K ++ ME G+K V Y IH +A + +E+ G+KP+ Y +
Sbjct: 768 ATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMT 827
Query: 295 GFCKDGNFEEAKKFYRIMS 313
EA + I+S
Sbjct: 828 SLLSRATVAEAYIYSGILS 846
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 4/208 (1%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP + ++ + D A M + I P++ + +L+ + E+
Sbjct: 291 KPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALS 350
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M G++ + Y++ + K A + + N+ Y + IY +C
Sbjct: 351 CVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYC 410
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV--YFMCKGGDYETALGFCKESIAKGWVPN 355
+ N + A+ R M G+ +Y TM+ Y M + + E L K G+ P+
Sbjct: 411 QACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIR--NEEKCLIVFKRLKECGFAPS 468
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK 383
T L+ KVS+A E+ ++K
Sbjct: 469 VITYGCLINMYTKIGKVSKALEVSKMMK 496
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT------RPDLQNERFHAHSIILYGQANMTEHA 129
+ + I + L E + + E+L +PD + FH I +Y +A A
Sbjct: 211 VTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPD--QKMFHMM-IYMYKKAGDYAQA 267
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ F +M E K+ S FN+L+ + DYKEV ++ + + G+KPD+ +Y+ +IK
Sbjct: 268 RKLFAQMSERKIPLSTVTFNSLM---SFETDYKEVSSIYDQMQRA-GMKPDVVSYSLLIK 323
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A+ ++ A ++ EM ++P S+ L+ F ++ N V + M R+ ++
Sbjct: 324 AYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEP 383
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ Y + + A+ + G+KPN V Y + G+ K N E+ + Y
Sbjct: 384 DLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVY 443
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M G+ PN ++Y T++ + D+ A+ + KE A+G+ P+ L++
Sbjct: 444 ERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPPDQKAKNILLSLANTP 503
Query: 370 SKVSEAKELIG 380
+ EA EL+G
Sbjct: 504 EEQQEANELVG 514
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ AV+ + +D +R +V ++ ++ ++ K + ++ E + I PD+ TY+
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMV-SKRISPDVVTYS 237
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A + M +I PN +F L+ GF KE K + VL +M +
Sbjct: 238 SLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK 297
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+K V YN + C +++ +AK+L + M +G+ P+ +YS I GFCK +EA
Sbjct: 298 NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M + PN Y ++V +CK G AL E +G N T S++
Sbjct: 358 MKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417
Query: 366 LAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ + V +A L+ +KEK ++ T+ + GL
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 109 NERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
N + SI++ G + A M + ++ V +N+L+ + K + K
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS 324
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+F + G+ PD+ +Y+ +I FC+ A + EM K I PN ++ +LV G
Sbjct: 325 LFNVMAQR-GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGL 383
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + +++ M G S + YN + ++CK +A LL ++ KG++P+
Sbjct: 384 CKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDI 443
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
TY+ I G CK G ++A+K + + G SPN Y +++ C G ++ L +
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSK 503
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G +PN T + L+ L + +A++L+
Sbjct: 504 MKDNGCIPNAITYEILIHSLFEKDENDKAEKLL 536
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
++AV F M + +V F+ L+ +E K V K +K D+ TYN
Sbjct: 250 KYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK-NVKLDVVTYNS 308
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ +C + A S+ M ++ + P+ S+ ++ GF K + ++ K+ + M
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN + LCK + + A L+DEM +G N +TY+ + CK+ + ++A
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ G+ P+ Y ++ +CK G + A ++ + KG+ PN T SL+ G
Sbjct: 429 VLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488
Query: 367 AGASKVSEAKELIGLVKE 384
E ++ +K+
Sbjct: 489 CNKGFFDEGLAMLSKMKD 506
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y A F M + + V +++ ++ K E ++F E I P
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM-HCKQIFP 371
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C+S +S A ++ EM + N ++ +++ K + +L
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++ G++ + Y V I+ LCK+ + +A+ + +++L KG PN TY+ I GFC
Sbjct: 432 TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNK 491
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G F+E M ++G PN+ Y +++ + + + + A +E IA+G +
Sbjct: 492 GFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 36/257 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D +Y +I C ++ +A +L +D K ++PN + ++ K++ D
Sbjct: 158 GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDA 217
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M + V Y+ I C + K A L + M+S + PN T+S I G
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277
Query: 296 FCKDGNFEEAKK-----------------------------------FYRIMSNSGLSPN 320
FCK+G EAK + +M+ G++P+
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y M+ CK + A+ +E K PN T SLV GL + + S A EL+
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397
Query: 381 LVKEKFT-KNVDTWNEI 396
+ ++ N+ T+N I
Sbjct: 398 EMHDRGQPSNIITYNSI 414
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 1/218 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD T+ +IK C + A ++ + + + S+G L+ G + + +
Sbjct: 123 GYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAA 182
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ ++ ++ V MY+ I S+CK + +A L EM+SK + P+ VTYS I G
Sbjct: 183 VQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISG 242
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G + A + M + ++PN + ++ CK G A + K +
Sbjct: 243 FCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLD 302
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTW 393
T SL+ G +V++AK L ++ ++ D W
Sbjct: 303 VVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP-DVW 339
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P A FG ++ K ++Y+ + Q ME G+K N+ ++ +L + ++
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++L KG P++VT++ I G C G +A F+ + G + Y T++ +C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDT 392
G+ + A+ + K PN +++ + V++A +L +V ++ + +V T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 393 WNEIEAGL 400
++ + +G
Sbjct: 236 YSSLISGF 243
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 148/310 (47%), Gaps = 17/310 (5%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE-HAVRT- 132
+SI I+ + +G + L E+K + PD+ +S ++ +++ VRT
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDI-----FTYSTLIDALCKLSQWENVRTL 270
Query: 133 FKEMDEHKLRHSVGAFNALLLALTI---AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
F EM + +V FN+++ L +D +E+ R IE G+ PD+ TYN +I
Sbjct: 271 FLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE----KGVDPDVITYNMIID 326
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ A I M KSI+PN S+ L+ G+ +++K ++ +V + + + G+K
Sbjct: 327 GYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ NV +H L +L + A+ DEMLS G P+ T+ + G+ K+G EEA +
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ N +Y ++ +CK G + A ++ G P+ T ++++G
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 370 SKVSEAKELI 379
+ EAK+++
Sbjct: 507 GLLDEAKDML 516
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN LL L K+ +F + + +P+ Y V+ C+ + A+ +L M
Sbjct: 145 FNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM 204
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++ S KPN + ++ F K+ + +L M++ + + Y+ I +LCKL +
Sbjct: 205 EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQW 264
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+ L EM+ + PN T++ I G CK+G E+A++ R M G+ P+ Y +
Sbjct: 265 ENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMI 324
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
+ G + A I K PN + L+ G A K+ EA ++ + +K
Sbjct: 325 IDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGL 384
Query: 388 K-NVDTWNEIEAGL 400
K ++ T N + GL
Sbjct: 385 KPSIVTCNVLLHGL 398
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP+ Y+ VI AFC+ A S+L EM +KSI P+ ++ L+ K ++E+V
Sbjct: 210 KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ M + V +N I LCK K +A+ ++ M+ KG+ P+ +TY+ I G+
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G + A++ + M N + PN Y ++ + + A+ C+E KG P+
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 358 TMKSLVTGLAGASKVSEAK 376
T L+ GL + A+
Sbjct: 390 TCNVLLHGLFELGRTKSAQ 408
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 8/276 (2%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
I +Y+ E PD+ +++I+ YG + A F M + ++ ++N L
Sbjct: 305 IMRYMIEKGVDPDVI-----TYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ K E +V E + G+KP + T N ++ E + SA + EM
Sbjct: 360 INGYARQKKIDEAMQVCREISQK-GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
P+ + L+ G++K E+ +ER + + +Y I LCK K +A
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
A +++ G+ P+ +TY+ I G+C++G +EAK R M ++G ++ Y +V
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ F +E K + T++ L+ +A
Sbjct: 539 LRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIA 574
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 37/240 (15%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ----------------- 240
A+S+ +M R P+ SF L+ + Y V + +
Sbjct: 54 DDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113
Query: 241 -----MMERYGM---------KSGVS----MYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+M R + K G+ ++N + L K +A L +++ + +
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENI 173
Query: 283 -KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+PN V Y + G CK G+ ++A R+M PN+ +Y ++ CK G + A
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
E K P+ T +L+ L S+ + L + ++ NV T+N + GL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ AV ++ EHK +L L K +K V + EF + G
Sbjct: 79 ITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYEEFLEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N + FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ M G+ V Y+V I+ LCK K A L DEML KG+ PN VT++ I G
Sbjct: 198 KLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFE 338
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 14/310 (4%)
Query: 83 NKLSEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT------ 132
N+ S+ F+G I+ YLE R ++ R H + + EH ++
Sbjct: 67 NQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLV 126
Query: 133 ---FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++E E S+ FN L D + + VF K +G++P + +YN ++
Sbjct: 127 WGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITK-WGLRPSVVSYNTLMN 185
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ D + + + M + P+ ++ L+ G KE K + N++ M G+
Sbjct: 186 GYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVP 245
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ +A
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLI 305
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
MS GL P+ Y T++ CK GD +TA K I + + +L++GL
Sbjct: 306 DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365
Query: 370 SKVSEAKELI 379
+ +A++++
Sbjct: 366 GRSVDAEKMM 375
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E ++ + G+ PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHAS-GVXPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ +
Sbjct: 280 PDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ +CK
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G P+ T L+ G
Sbjct: 400 KGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ + P D +S+ IN L + + + ++ +E+ + + N I + +
Sbjct: 205 ASGVXP----DVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A+ +K+M L + +N L+ L D + + E G+KPD T
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMK-GLKPDKIT 319
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D +A+ M +++I+ + ++ AL++G +E + D K+++ M
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREML 379
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
G+K Y + I+ +CK + LL EM G P+ VTY+ + G
Sbjct: 380 SVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L F KE V + ++G++ V YN ++ +L E L M
Sbjct: 145 FNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMH 204
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ G+ P+ TYS I G CK+ + A + + M GL PN + T++ CK G +
Sbjct: 205 ASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
A+ K+ +++ +P+ T +L+ GL +++A +LI GL +K T
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKIT 319
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFY+E G + + +N+ H CK A+++ D + G
Sbjct: 125 LVWGFYEE------------FLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWG 172
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+Y+ + G+ + G+ +E K M SG+ P+ Y ++ +CK + A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXAN 232
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
E + KG VPN T +L+ G +V A E+ ++ + ++ T+N + GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R ++ L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ +M+ G++ V ++V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + YR M + L P+ Y T++Y +CK GD + E KG P+
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQ 358
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + VF K +G++P + ++N ++ + + D + + + M
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITK-WGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ + L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++ MS GL P+ Y T+
Sbjct: 258 DLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 109/265 (41%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ T++ +I
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL-KSVMQASGVQPDVYTHSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK + L+DEM KG+KP+ +TY+ I G CK+G+ E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P Y ++ CK
Sbjct: 334 RKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD T KE G+ PN T
Sbjct: 394 KGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ + +
Sbjct: 20 IHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYLE 78
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + + I L KL+ +E L G +
Sbjct: 79 SGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYF 138
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ FCK+G A+ + ++ GL P+ + T++ K GD + GF +S+
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDE--GFRLKSV 196
Query: 349 --AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANEL 228
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 9/321 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+LE + P D + ++ +++L + N ++K L ++
Sbjct: 217 KLLEHMKVVGCEP----DVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPT--VVTYT 270
Query: 117 IILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
+++G N+ + A EM + + AF+ L+ + + E RV ++
Sbjct: 271 SLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEA-RVILKTMTE 329
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TYN ++ +C + A + M K P+ SF LV G+ K ++ ++
Sbjct: 330 MGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDE 389
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ M G+ YN I LC+ R+ EA+ L +M S G PN VTYS +
Sbjct: 390 AKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLD 449
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
K G ++A +R M NSGL P+ Y M+ MCK G ++ A E KG P
Sbjct: 450 CLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509
Query: 355 NFTTMKSLVTGLAGASKVSEA 375
N + G+ + EA
Sbjct: 510 NNWVCTPTIDGVCKGGLLDEA 530
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 146/322 (45%), Gaps = 5/322 (1%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++ ++ A P H ++SI I L + + LE +K + +
Sbjct: 182 ELFDVMVARGYKPNVH----SYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ + + AV F +M + +V + +L+ L +KE + E K
Sbjct: 238 VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM-KGGN 296
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PDL ++ +I C+ + S A IL M ++P+ +++ L+ G+ + +
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
KV ++M G V +++ ++ CK ++ EAK L DEM +G+ P++V+Y+ I G
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ EA++ ++ M ++G PN Y ++ + K G + A+G + G P+
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476
Query: 357 TTMKSLVTGLAGASKVSEAKEL 378
T ++ G+ K +A+EL
Sbjct: 477 VTYNIMIDGMCKYGKFKDAREL 498
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F M S+ F L AL K YK V + + + GI D+ + +I
Sbjct: 75 ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQM-EMAGISHDVLSLTILI 133
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC +S+L ++ + ++PN +F L+ GF E K ++ +M G K
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK 193
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y++ I LC++ K E LL+ M G +P+ V Y+ + CKD EA
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M +G+ P Y ++++ + G ++ A G E +P+ L+ +
Sbjct: 254 FCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCK 313
Query: 369 ASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
+VSEA+ ++ + E + +V T+N + G
Sbjct: 314 EGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ T++ +I FC A + M + KPN S+ ++ G + K +V
Sbjct: 156 GLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEV 215
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+L+ M+ G + V +YN + LCK R EA + +M G+ P VTY+ I+G
Sbjct: 216 IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHG 275
Query: 296 F-----------------------------------CKDGNFEEAKKFYRIMSNSGLSPN 320
CK+G EA+ + M+ G+ P+
Sbjct: 276 LRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPD 335
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ Y T++ C + A + I+KG +P+ + LV G A ++ EAK+L
Sbjct: 336 VATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFD 395
Query: 381 -LVKEKFTKNVDTWNEIEAGLPQ 402
+ + ++N + +GL Q
Sbjct: 396 EMTHRGLIPDTVSYNTLISGLCQ 418
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 11/251 (4%)
Query: 74 DRLAFSIAIN---KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--H 128
D +AFS+ I+ K E + I + + E+ PD+ ++ ++ G E
Sbjct: 300 DLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA-----TYNTLMNGYCLRMEVVE 354
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + F+ M V +F+ L+ AK E K++F E G+ PD +YN +I
Sbjct: 355 ARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR-GLIPDTVSYNTLI 413
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A + +M PN ++ L+ K+ + + + ME G+K
Sbjct: 414 SGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLK 473
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN+ I +CK K +A+ L E+ KG++PN+ + I G CK G +EA K
Sbjct: 474 PDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKA 533
Query: 309 YRIMSNSGLSP 319
+R M SP
Sbjct: 534 FRQMEKDDCSP 544
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
H ++ Y + + A + EM E + +N L+ L + +E F +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDM 283
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ YG+ PD TY +I C+S S+ A ++L EM +KPN + L+ GF +E
Sbjct: 284 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 343
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ K+++ M G++ Y+ + LCK+ + A LL +M+ +P+++TY+
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G + + ++A + M N+G+SPN Y M++ +C+ G+ E A +E KG
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
PN L++G VS A E+ + K ++ +N + GL
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 109/204 (53%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P+ TY+ +++ C+ A +L +M R S +P+ ++ ++ G ++ +D
Sbjct: 357 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDA 416
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L ME G+ V Y++ IH LC+ + +A LL+EM +KG+KPN+ Y+ I G
Sbjct: 417 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 476
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++GN A + + M+ + P+ Y ++++ + K G E + + + +G +PN
Sbjct: 477 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 536
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ G + A++L+
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLV 560
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 154/360 (42%), Gaps = 42/360 (11%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+SI I+ L ++ S LEE+ T+ N +A I Y + A F +M
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + + +N+L+ L+ +E + F + + G+ P+ TY+ +I + ++ D
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM-QERGLLPNEFTYSGLIHGYLKNGDL 553
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN--------------------- 236
SA ++ M +KPN + L+ ++K + E V+
Sbjct: 554 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 613
Query: 237 --------------KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+VL +E+ G V +Y+ I LCK +A +LDEM KG+
Sbjct: 614 IHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 673
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN V Y+ I G CK G+ A+ + + GL PN Y +++ CK GD A
Sbjct: 674 DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFY 733
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK---NVDTWNEIEAG 399
E +A G P+ L TG + A + +A + L++E F + ++ ++N + G
Sbjct: 734 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA---MFLIEEMFLRGHASISSFNNLVDG 790
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P++ TY+ +I C+S + A +L EM K +KPNA + L++G+ +E
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + + + YN I L K+ + E+ +M +G+ PN TYS I+G
Sbjct: 487 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 546
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ K+G+ E A++ + M ++GL PN +Y ++ K D E K + +G + +
Sbjct: 547 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 606
Query: 356 FTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
L+ L+ + + A + L G+ K +V ++ + +GL
Sbjct: 607 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +++ E TFK M + + + L+ L+ + + + RV K G P
Sbjct: 582 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN-GSVP 640
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ Y+ +I C+++D A+ IL EM +K + PN + AL+ G K V
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ Y I CK+ + A L +EML+ G+ P++ YS G
Sbjct: 701 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A M G + SS + +V CK G + L + +G VPN T+
Sbjct: 761 GDLEQAMFLIEEMFLRGHASISS-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 819
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+++++GL+ A K+SE + +++K +++
Sbjct: 820 ENIISGLSEAGKLSEVHTIFVELQQKTSES 849
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R EM+ + +V ++ ++ L + + ++ + E T G+KP+ Y +I
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLI 474
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + S A I +M + ++ P+ + +L+ G K + E+ K M+ G+
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y+ IH K A+ L+ ML G+KPN V Y + + K + E+
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
++ M + G+ ++ +Y +++ + G+ E A G VP+ SL++GL
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC- 653
Query: 369 ASKVSEAKELIGLVKEKFTKNVD 391
K ++ ++ G++ E K VD
Sbjct: 654 --KTADREKAFGILDEMSKKGVD 674
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 135/331 (40%), Gaps = 32/331 (9%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMT--E 127
LD + I I+ LS + + L ++ + PD+ H +S ++ G E
Sbjct: 605 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV-----HVYSSLISGLCKTADRE 659
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A EM + + ++ +NAL+ L + D + VF G+ P+ TY +
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI-LAKGLVPNCVTYTSL 718
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I C+ D S+A+ + EM I P+A + L G E +++ M G
Sbjct: 719 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 778
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE--- 304
S +S +N + CK K E LL ++ +G+ PN++T + I G + G E
Sbjct: 779 AS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 837
Query: 305 -------------AKKFYRI---MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
A+ F + M N G P V M+ CK G+ + AL +
Sbjct: 838 IFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIV 896
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
AK ++ ++V L K+SEA L+
Sbjct: 897 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 927
>gi|194689808|gb|ACF78988.1| unknown [Zea mays]
Length = 279
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
D + A L M + I P + L+ YK + + + + M + V+ YN
Sbjct: 4 DDAKAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECEPDVATYN 63
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
V+ K E ++ EM + G+KP++ TY+ + +CK G E+AK Y ++
Sbjct: 64 VKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEK 123
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G S +++ Y M+ +C GD++ LG K+S+ + VP+F TMK LV GLA +V++A
Sbjct: 124 GCSADAATYKHMLAELCAYGDFDAGLGIFKDSLKRRKVPDFRTMKGLVEGLAKGGRVADA 183
Query: 376 KELIGLVKEKFTKN-VDTWNEIEAGL 400
KE++ VK+ F +N + W ++E L
Sbjct: 184 KEVVAEVKKMFPENLLSGWKKVEKEL 209
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 142/322 (44%), Gaps = 2/322 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ IN L A + L+E+ R +E + I Y + A +
Sbjct: 395 DGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMH 454
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + + +V + AL L D + + E G++ + TYN +I C+
Sbjct: 455 NAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM-SNKGLELNACTYNSLINGLCK 513
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +A+MD +KP+ ++ L+ K + + +LQ M G+K +
Sbjct: 514 AGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVT 573
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YNV ++ C + K LLD ML K + PN+ TY+ + +C + N + + Y+ M
Sbjct: 574 YNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMR 633
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ + PN + Y ++ CK + + AL F E I KG+ T+ +L+ L K
Sbjct: 634 SRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFV 693
Query: 374 EAKELI-GLVKEKFTKNVDTWN 394
EA+EL + KE T D ++
Sbjct: 694 EARELFHDMRKEGLTAESDVYD 715
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + I I+ + L+E+ N + + L A+R
Sbjct: 290 DVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVV 349
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M + K+ + +L D +R F E + G+ D TY +I C
Sbjct: 350 EDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK-GLATDGVTYTTMINGLCR 408
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + A +L EM + + + ++ L+ G+ K K + ++ M + G+ V
Sbjct: 409 AVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVT 468
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y LCK A LL EM +KG++ N+ TY+ I G CK G E+A + M
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ L P+ Y T++ +CK GD + A +E + KG P T L+ G + +V
Sbjct: 529 TACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 588
Query: 374 EAKELIGLVKEK-FTKNVDTWNEI 396
K+L+ + EK N T+N +
Sbjct: 589 GGKKLLDWMLEKNIHPNAATYNSL 612
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F+E+ HK +V ++N LL AL A K+ +++F E PD+ TY
Sbjct: 245 DEAIELFQEL-PHK---NVCSYNILLKALCDAGRVKDARQLFDEMASA----PDVVTYGI 296
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C + +A +L EM ++PNA+ + ++VA + D +V++ M +
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ ++Y + C A+ DEM KG+ + VTY+ I G C+ EEA+
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K + M L + Y ++ CK G A + +G PN T +L GL
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGL 476
Query: 367 AGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
V A EL+ + K N T+N + GL
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 511
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 1/232 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A E A+RT +MD L+ V + L+ AL + D + E GIKP +
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK-GIKPTI 571
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ FC S +L M K+I PNA+++ +L+ + E + ++ +
Sbjct: 572 VTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKG 631
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + + YN+ I CK R EA DEM+ KG + + +YS I K
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKK 691
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
F EA++ + M GL+ S VY + + E+ L C E + V
Sbjct: 692 FVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIV 743
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 2/277 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
LY + A+ KEM+ ++H+ ++ L+ D+ +F E ++ G++
Sbjct: 452 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 510
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD YN +I+AFC+ + A IL +M ++ ++P+ +F ++ G+ +
Sbjct: 511 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 570
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L +M R G V YN IH L + K A ++LD+M G+ PN TY+ + G+
Sbjct: 571 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 630
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ +A +++ + SGL + +Y T++ CK G ++AL +E + N
Sbjct: 631 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 690
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
L+ G A V EA++L+ +KE N+ T+
Sbjct: 691 YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 727
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 9/311 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEM 136
+S+ IN + F EE+ R LQ +R + +I + + + A+ ++M
Sbjct: 481 YSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 539
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ +++ S AF ++ +A D K ++ + G P + TYN +I
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPTVMTYNALIHGLVRKHK 598
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+L +M I PN ++ ++ G+ + ++ G+K V +Y
Sbjct: 599 VQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYET 658
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ + CK + A A+ EM + + N+ Y+ I G+ + G+ EA+ + M G
Sbjct: 659 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 718
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS------ 370
+ PN Y + + CK GD + A +E + G PN T +L+ G A S
Sbjct: 719 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 778
Query: 371 KVSEAKELIGL 381
K E +L GL
Sbjct: 779 KCFEEMKLAGL 789
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 146/330 (44%), Gaps = 15/330 (4%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG- 121
RA + P + F+ ++ + A G +EE+K+ + +SI++ G
Sbjct: 324 RARGIEPNA----FVFTSLVHAYAVARDMRGALSCVEEMKS--EGLELTIVTYSILISGF 377
Query: 122 -------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
Q+ E A +EM+E + + +++++ TI ++ + VF E K
Sbjct: 378 AKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF-ERLKE 436
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G KP + +Y ++ + + + A SI EM+ IK N ++ L+ GF + +
Sbjct: 437 CGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFAN 496
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ + M R G++ ++YN+ I + CK+ A +L++M + M+P++ + I
Sbjct: 497 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 556
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G+ G+ + A +M SG P Y +++ + + + A+ + G P
Sbjct: 557 GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITP 616
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
N T ++ G A + + +A E +KE
Sbjct: 617 NEHTYTIIMRGYAASGDIGKAFEYFTKIKE 646
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 28/365 (7%)
Query: 60 EICRAAALTPESHLDRLAFSIA----INKLSE--ANYFNGISQYLEELK-TRPDLQNERF 112
E CR ES D ++ I KLS + YF Q L+ L T P L +
Sbjct: 233 EACREFRRVVESRPDNWQAVVSAFERIPKLSGVVSAYFPLCKQSLDVLDLTYPFLFKKLL 292
Query: 113 HAHS-------IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
H S I+ Y + HA TF+ M + + F +L+ A +A+D +
Sbjct: 293 HEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGAL 352
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS------AYSILAEMDRKSIKPNASSF 219
+E K+ G++ + TY+ +I F + +DS A ++ EM+ I +
Sbjct: 353 SC-VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVY 411
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
+++ G+ ++ NK L + ER G K + Y ++ K+ K A+A ++ E
Sbjct: 412 HSMMHGY---TIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE 468
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M S G+K N+ TYS I GF +F A + M SGL P+ ++Y ++ CK G+
Sbjct: 469 MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGN 528
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNE 395
+ A+ ++ + P+ + ++ G A A + A + + L++ V T+N
Sbjct: 529 MDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNA 588
Query: 396 IEAGL 400
+ GL
Sbjct: 589 LIHGL 593
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 1/309 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
DR +++ I + + LE+++ + R I Y A + A+ T
Sbjct: 512 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL 571
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M +V +NAL+ L + V + GI P+ TY +++ +
Sbjct: 572 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAA 630
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S D A+ ++ +K + + L+ K + + V + M + +
Sbjct: 631 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 690
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I + EA+ L+ +M G+ PN TY+ +I CK G+ + A+K M
Sbjct: 691 YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMV 750
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL PN Y T++ + + AL +E G P+ + LVT L + V
Sbjct: 751 DVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVM 810
Query: 374 EAKELIGLV 382
E G++
Sbjct: 811 EGSTYTGII 819
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 13/208 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
H ++II+ G A + A F ++ E L+ V + LL A + + V
Sbjct: 619 HTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTRE 678
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F + P+ I YN +I + D A ++ +M + PN ++ + +
Sbjct: 679 MSFQKIPRNTFI------YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 732
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + KV++ M G+K V Y I ++ A +EM G+KP+
Sbjct: 733 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 792
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+Y + E + I+S
Sbjct: 793 EASYHCLVTSLLSRATVMEGSTYTGIIS 820
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM + SV +N L+ AL + K +E + + E + G++PD+ TYN I +C
Sbjct: 347 EMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM-REKGVEPDVVTYNIQINGYCRC 405
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
++ A S+ EM K+I+P ++ +L+ F K + + + + + GM + M+
Sbjct: 406 GNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMF 465
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N I C A LL EM + + P+ VT++ + G+C++ EEAKK M
Sbjct: 466 NALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKE 525
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G+ P+ Y T++ K GD + AL E ++ G+ P T +L+ G + +
Sbjct: 526 RGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADH 585
Query: 375 AKELIGLVKEK 385
A+EL+ ++ K
Sbjct: 586 AEELLREMQSK 596
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + FK M + L+ +N+ + L + +E V + ++ G+ P+ TYN
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES-GLVPNAVTYNA 327
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C D A++ EM + I + ++ L+ + E++ E+ +++ M G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ V YN++I+ C+ +A +L DEM+ K ++P TY+ I F K EA+
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ ++ G+ P+ ++ ++ C G+ + A KE VP+ T +L+ G
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507
Query: 367 AGASKVSEAKELIGLVKEKFTK 388
KV EAK+L+ +KE+ K
Sbjct: 508 CRERKVEEAKKLLDEMKERGIK 529
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A+ F EM E +R +V + +L+ E + F + K G+ P
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKE-GMLP 460
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +N +I C + + A+ +L EMD + P+ +F L+ G+ +E K E+ K+L
Sbjct: 461 DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLL 520
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G+K YN I K +A + DEMLS G P +TY+ I G+ K
Sbjct: 521 DEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKI 580
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
G + A++ R M + G++P+ S Y ++ M D
Sbjct: 581 GEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDD 617
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
IK + T+N +I C A + M+ +KPN ++ ++ G+ K+E
Sbjct: 212 NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA 271
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+K+ + M+ +K YN I LCK R+ EA +L ++L G+ PN+VTY+ I G
Sbjct: 272 SKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDG 331
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G+ ++A + M N G+ + Y +++ + E A KE KG P+
Sbjct: 332 CCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD 391
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNV 390
T + G + AK+ + L E KN+
Sbjct: 392 VVTYNIQINGYC---RCGNAKKALSLFDEMVEKNI 423
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A+ + EM + +IK + +F ++ +E K++ + ME YG+K V YN I+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
C K A + M K +KP+ TY+ FI CK+ EEA + SGL P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
N+ Y ++ C GD + A + E + +G V + T L+ L ++ EA+++I
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380
Query: 380 GLVKEK-FTKNVDTWN 394
++EK +V T+N
Sbjct: 381 KEMREKGVEPDVVTYN 396
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 6/214 (2%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
++ ++ A+C+ A L M I P + +L++ K K + V + M
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ +KS + +N+ I+ LC+ K +AK + M G+KPN VTY+ I G+C G F
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A K ++ M + L P+ Y + + +CK E A G + + G VPN T +L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328
Query: 363 VTGLAGASKVSEA----KELI--GLVKEKFTKNV 390
+ G + +A E++ G+V FT N+
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 36/183 (19%)
Query: 253 MYNVRIHSLCKLRKCAEAKALL-----------------------------------DEM 277
++++ + + C+ RK EA L +EM
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ +K + VT++ I C++G +++AK F M G+ PN Y T++ C G +
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEI 396
E A K K P+ T S ++ L ++ EA L L++ N T+N +
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328
Query: 397 EAG 399
G
Sbjct: 329 IDG 331
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
LY + A+ KEM+ ++H+ ++ L+ D+ +F E ++ G++
Sbjct: 426 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 484
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD YN +I+AFC+ + A IL +M ++ ++P+ +F ++ G+ +
Sbjct: 485 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 544
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L +M R G V YN IH L + K A ++LD+M G+ PN TY+ + G+
Sbjct: 545 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 604
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ +A +++ + SGL + +Y T++ CK G ++AL +E + N
Sbjct: 605 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 664
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKE 384
L+ G A V EA++L+ +KE
Sbjct: 665 YNILIDGWARRGDVWEAEDLMKQMKE 690
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I+ ++ N +E KT+ N +++ I + Q+ E A +E
Sbjct: 313 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE 372
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + +++++ TI ++ + VF E K G KP + +Y ++ + +
Sbjct: 373 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF-ERLKECGFKPSIISYGCLLNLYVKIG 431
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A SI EM+ IK N ++ L+ GF + + + + M R G++ ++YN
Sbjct: 432 KVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYN 491
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I + CK+ A +L++M + M+P++ + I G+ G+ + A +M S
Sbjct: 492 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 551
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P Y +++ + + + A+ + G PN T ++ G A + + +A
Sbjct: 552 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 611
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 612 FEYFTKIKE 620
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 9/311 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEM 136
+S+ IN + F EE+ R LQ +R + +I + + + A+ ++M
Sbjct: 455 YSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 513
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ +++ S AF ++ +A D K ++ + G P + TYN +I
Sbjct: 514 QKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPTVMTYNALIHGLVRKHK 572
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+L +M I PN ++ ++ G+ + ++ G+K V +Y
Sbjct: 573 VQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYET 632
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ + CK + A A+ EM + + N+ Y+ I G+ + G+ EA+ + M G
Sbjct: 633 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 692
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS------ 370
+ PN Y + + CK GD + A +E + G PN T +L+ G A S
Sbjct: 693 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 752
Query: 371 KVSEAKELIGL 381
K E +L GL
Sbjct: 753 KCFEEMKLAGL 763
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 1/309 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
DR +++ I + + LE+++ + R I Y A + A+ T
Sbjct: 486 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL 545
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M +V +NAL+ L + V + GI P+ TY +++ +
Sbjct: 546 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAA 604
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S D A+ ++ +K + + L+ K + + V + M + +
Sbjct: 605 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 664
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I + EA+ L+ +M G+ PN TY+ +I CK G+ + A+K M
Sbjct: 665 YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMV 724
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL PN Y T++ + + AL +E G P+ + LVT L + V
Sbjct: 725 DVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVM 784
Query: 374 EAKELIGLV 382
E G++
Sbjct: 785 EGSTYTGII 793
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 131/320 (40%), Gaps = 37/320 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ Y + HA TF+ M + + F +L+ A +A+D + +E K+ G
Sbjct: 249 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC-VEEMKSEG 307
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++ + TY+ +I F + +DS SA ++ E K N + ++ + E
Sbjct: 308 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAE 367
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP------------ 284
++++ ME G+ + + +Y+ +H ++ + + + + G KP
Sbjct: 368 ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 427
Query: 285 -----------------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
N+ TYS I GF +F A + M SGL P+
Sbjct: 428 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 487
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++Y ++ CK G+ + A+ ++ + P+ + ++ G A A + A + + L
Sbjct: 488 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 547
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
++ V T+N + GL
Sbjct: 548 MRRSGCVPTVMTYNALIHGL 567
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+++ V F PK P + +I + + D A + M + I+PNA F
Sbjct: 226 NWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVF 280
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+LV + ++ M+ G++ + Y++ I K+ A L E +
Sbjct: 281 TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKT 340
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
K N + YS+ I+ C+ GN E A++ R M G+ VY +M++
Sbjct: 341 KLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 390
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ FG ++ + K + M G++ ++ +H+ R A +
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 298
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
++EM S+G++ VTYS I GF K + + A ++ S N +Y +++ C
Sbjct: 299 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 358
Query: 333 KGGDYETALGFCKE 346
+ G+ E A +E
Sbjct: 359 QSGNMERAEELVRE 372
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 13/208 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
H ++II+ G A + A F ++ E L+ V + LL A + + V
Sbjct: 593 HTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTRE 652
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F + P+ I YN +I + D A ++ +M + PN ++ + +
Sbjct: 653 MSFQKIPRNTFI------YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 706
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + KV++ M G+K V Y I ++ A +EM G+KP+
Sbjct: 707 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 766
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+Y + E + I+S
Sbjct: 767 EASYHCLVTSLLSRATVMEGSTYTGIIS 794
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+ + I + K G+ A+ + M G+ PN+ V+ ++V+ D AL
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 298
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+E ++G T L++G A K+++++ L KE TK
Sbjct: 299 CVEEMKSEGLELTIVTYSILISGFA---KINDSQSADNLFKEAKTK 341
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 39/344 (11%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFK 134
A+ I L++ + + + ++++ L E F II+ Y ++ + AV TF
Sbjct: 79 AYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETF---CIIMRKYARSQKVKEAVYTFN 135
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKD-------YKEVKRVFIEFPKTY------------ 175
M+++ + ++ AFN+LL AL +K+ + +K FI KTY
Sbjct: 136 IMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPN 195
Query: 176 --------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
G PD+ TY ++ C++ A I+ EMD KP + +
Sbjct: 196 LPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSV 255
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV + E + ED MER +++ V++YN I + CK+ K A +L+EM KG
Sbjct: 256 LVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKG 315
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++PNS T + + G+ +EA + +R M P++ Y M+ C+ E AL
Sbjct: 316 IRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMAL 374
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K K +VP+ T L+ GL S+A L+ + EK
Sbjct: 375 KVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEK 418
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + I ++ L +A + ++E+ + ++ + YG N E AV TF
Sbjct: 214 DIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTF 273
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M+ +++ V +NAL+ A K RV E GI+P+ T N ++ +
Sbjct: 274 LDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEM-DCKGIRPNSRTCNIILNSLIS 332
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D+ A+ + M K P+A ++ ++ F + +K E KV + M +
Sbjct: 333 CGDTDEAFRVFRRM-IKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHT 391
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++V I+ LCK ++A LL+EM+ KG++P+SVT+ K+G
Sbjct: 392 FSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEG 438
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 8/272 (2%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDE--HKLRH----SVGAFNALLLALTIAKDYKE 163
+R + HSI Y + +R ++ M + +K+R +V F ++ ++ KE
Sbjct: 70 QRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQKVKE 129
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
F + Y + P+L +N ++ A C+S + A I M + I P++ ++ L+
Sbjct: 130 AVYTF-NIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFI-PDSKTYSILL 187
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
G+ K ++ + M G + Y + + LCK + EA ++ EM S K
Sbjct: 188 EGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCK 247
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P S YS ++ + + E+A + M + + + +VY ++ CK + A
Sbjct: 248 PTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRV 307
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E KG PN T ++ L EA
Sbjct: 308 LNEMDCKGIRPNSRTCNIILNSLISCGDTDEA 339
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 10/240 (4%)
Query: 116 SIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
I+ YG +A + AV KEMD + + ++ L+ I ++ F
Sbjct: 214 DIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTF 273
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
++ + I+ D+ YN +I AFC+ + +AY +L EMD K I+PN+ + ++
Sbjct: 274 LDMERN-EIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLIS 332
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
++ +V + M + Y + I C+ K A + M K P+ T
Sbjct: 333 CGDTDEAFRVFRRMIKVC-DPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHT 391
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
+S I G CK GN +A M G+ P+S + + + K G E L F +E +
Sbjct: 392 FSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEG-REDVLEFLQEKM 450
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
LY + A+ KEM+ ++H+ ++ L+ D+ +F E ++ G++
Sbjct: 448 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 506
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD YN +I+AFC+ + A IL +M ++ ++P+ +F ++ G+ +
Sbjct: 507 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 566
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L +M R G V YN IH L + K A ++LD+M G+ PN TY+ + G+
Sbjct: 567 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 626
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ +A +++ + SGL + +Y T++ CK G ++AL +E + N
Sbjct: 627 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 686
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKE 384
L+ G A V EA++L+ +KE
Sbjct: 687 YNILIDGWARRGDVWEAEDLMKQMKE 712
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I+ ++ N +E KT+ N +++ I + Q+ E A +E
Sbjct: 335 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE 394
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + +++++ TI ++ + VF E K G KP + +Y ++ + +
Sbjct: 395 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF-ERLKECGFKPSIISYGCLLNLYVKIG 453
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A SI EM+ IK N ++ L+ GF + + + + M R G++ ++YN
Sbjct: 454 KVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYN 513
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I + CK+ A +L++M + M+P++ + I G+ G+ + A +M S
Sbjct: 514 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 573
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P Y +++ + + + A+ + G PN T ++ G A + + +A
Sbjct: 574 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 633
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 634 FEYFTKIKE 642
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 9/311 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEM 136
+S+ IN + F EE+ R LQ +R + +I + + + A+ ++M
Sbjct: 477 YSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 535
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ +++ S AF ++ +A D K ++ + G P + TYN +I
Sbjct: 536 QKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPTVMTYNALIHGLVRKHK 594
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+L +M I PN ++ ++ G+ + ++ G+K V +Y
Sbjct: 595 VQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYET 654
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ + CK + A A+ EM + + N+ Y+ I G+ + G+ EA+ + M G
Sbjct: 655 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 714
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS------ 370
+ PN Y + + CK GD + A +E + G PN T +L+ G A S
Sbjct: 715 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 774
Query: 371 KVSEAKELIGL 381
K E +L GL
Sbjct: 775 KCFEEMKLAGL 785
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 1/309 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
DR +++ I + + LE+++ + R I Y A + A+ T
Sbjct: 508 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL 567
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M +V +NAL+ L + V + GI P+ TY +++ +
Sbjct: 568 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAA 626
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S D A+ ++ +K + + L+ K + + V + M + +
Sbjct: 627 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 686
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I + EA+ L+ +M G+ PN TY+ +I CK G+ + A+K M
Sbjct: 687 YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMV 746
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL PN Y T++ + + AL +E G P+ + LVT L + V
Sbjct: 747 DVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVM 806
Query: 374 EAKELIGLV 382
E G++
Sbjct: 807 EGSTYTGII 815
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 131/320 (40%), Gaps = 37/320 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ Y + HA TF+ M + + F +L+ A +A+D + +E K+ G
Sbjct: 271 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC-VEEMKSEG 329
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++ + TY+ +I F + +DS SA ++ E K N + ++ + E
Sbjct: 330 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAE 389
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP------------ 284
++++ ME G+ + + +Y+ +H ++ + + + + G KP
Sbjct: 390 ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 449
Query: 285 -----------------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
N+ TYS I GF +F A + M SGL P+
Sbjct: 450 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 509
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++Y ++ CK G+ + A+ ++ + P+ + ++ G A A + A + + L
Sbjct: 510 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 569
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
++ V T+N + GL
Sbjct: 570 MRRSGCVPTVMTYNALIHGL 589
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+++ V F PK P + +I + + D A + M + I+PNA F
Sbjct: 248 NWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVF 302
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+LV + ++ M+ G++ + Y++ I K+ A L E +
Sbjct: 303 TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKT 362
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
K N + YS+ I+ C+ GN E A++ R M G+ VY +M++
Sbjct: 363 KLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 412
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ FG ++ + K + M G++ ++ +H+ R A +
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
++EM S+G++ VTYS I GF K + + A ++ S N +Y +++ C
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 380
Query: 333 KGGDYETALGFCKE 346
+ G+ E A +E
Sbjct: 381 QSGNMERAEELVRE 394
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 13/208 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
H ++II+ G A + A F ++ E L+ V + LL A + + V
Sbjct: 615 HTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTRE 674
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F + P+ I YN +I + D A ++ +M + PN ++ + +
Sbjct: 675 MSFQKIPRNTFI------YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 728
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + KV++ M G+K V Y I ++ A +EM G+KP+
Sbjct: 729 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 788
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+Y + E + I+S
Sbjct: 789 EASYHCLVTSLLSRATVMEGSTYTGIIS 816
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+ + I + K G+ A+ + M G+ PN+ V+ ++V+ D AL
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+E ++G T L++G A K+++++ L KE TK
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFA---KINDSQSADNLFKEAKTK 363
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 36/292 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV +F M + FN +L +L K Y V +F +F + GI PDL T + +I
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNGITPDLCTLSILI 103
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNA-------------------------------- 216
FC + + A+S+ A + ++ PNA
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 217 ---SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
S+G L+ G K + + V ++L+ +E + +K + MY IH LCK + +A L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
EM+ KG+ PN TY+ I+GFC GN +EA M ++P+ + ++ + K
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G + A+ +E K PN T SL+ GL + A L +KE+
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 335
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++ L+ L A + K V R+ + + + +KPDL Y +I C++ A + +E
Sbjct: 168 SYGTLINGLCKAGETKAVARLLRKL-EGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSE 226
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K I PN ++ L+ GF ++ +L M+ + V +N+ I +L K K
Sbjct: 227 MIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGK 286
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA +L +EM K M PN VTY+ I G CK+ + E A + M G+ PN Y
Sbjct: 287 IDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTI 346
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++ +CKGG E A F + + KG+ N T ++ GL A + +L
Sbjct: 347 LLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A T+ R ++++ H ++ + + ++ L K + ++ E GI P++
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEM-IVKGISPNV 236
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY +I FC + A+S+L EM K+I P+ +F L+ KE K ++ + +
Sbjct: 237 FTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEE 296
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ M + Y I LCK A AL +M +G++PN +Y+ + CK G
Sbjct: 297 MKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGR 356
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E AK+F++ + G N Y M+ +CK G + + + KG +PN T K+
Sbjct: 357 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKT 416
Query: 362 LVTGL 366
++ L
Sbjct: 417 IICAL 421
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 7/285 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEH 128
LD++++ IN L +A +++ L +L+ +PDL H + + +
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLC---KNKLLGD 219
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + EM + +V + L+ I + KE + E K I PD+ T+N +I
Sbjct: 220 ACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEM-KLKNINPDVYTFNILI 278
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A + A S+ EM K++ PN ++ +L+ G K E + + M+ G++
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y + + +LCK + AK +L KG N TY+ I G CK G F +
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
M G PN+ + T++ + + + + A F +E IA+G +
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D +Y +I C++ ++ + +L +++ S+KP+ + ++ K + D
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDA 220
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M G+ V Y IH C + EA +LL+EM K + P+ T++ I
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 280
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+G +EA + M + + PN Y +++ +CK E A+ CK+ +G PN
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ L+ L ++ AK+ L+ + + NV T+N + GL
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 386
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 36/217 (16%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P F +++ K ++Y V + + E G+ + ++ I+ C L A ++
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 274 LDEMLSKGMKPNSVT-----------------------------------YSHFIYGFCK 298
+L +G PN++T Y I G CK
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G + + R + + P+ +Y T+++ +CK A E I KG PN T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+L+ G + EA L+ +K K +V T+N
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFN 275
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
II Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 IIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L +EML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K ED N++ + M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 XLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M + GL P
Sbjct: 320 GSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G+VP+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFY+E G + + +N+ +HS K + A+++ D + G
Sbjct: 119 LVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+++ + G+ K G+ +E + M SG+ P+ Y ++ +CK E A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDAN 226
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E + G VPN T +L+ G +V A E+ ++ + + ++ T+N + GL
Sbjct: 227 ELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P++ TY +I A C+ A +M + + P+ F +LV G +K+E
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAE 432
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ + G++ +N + +LC+ + EA+ L+D ML G++P+ ++Y+ + G
Sbjct: 433 ELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGH 492
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C G +EA K ++ + GL P+ Y T+++ CK + A +E + KG P+
Sbjct: 493 CLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV 552
Query: 357 TTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T +++ GL + SEAKEL + ++ + N+ T+N I GL
Sbjct: 553 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TY VI C++ A + M K ++PN ++ L+ G+ K+++V ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
LQ M +G++ +Y V + LCK +C EA+ + D ++ KG+KPN Y ++G+
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G+ E F +M +G+SP+ ++ M K + A+ + + PN T
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT 379
Query: 359 MKSLVTGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEIEAGL 400
+L+ L +V +A + ++ E T ++ ++ + GL
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGL 422
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA-LTIAKDYKEVKRVFIEFPKTYGIKPD 180
+A M + A F+ M + +R + + L+ L+I K +KEV ++ E T+G++PD
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGK-WKEVVQMLQEM-STHGLQPD 271
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
Y ++ C++ + A +I + RK IKPN + +G L+ G+ E +++ L
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+M G+ ++N+ + K EA + D+M + + PN VTY I CK G
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLG 391
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
++A + M + G++P+ V+ ++VY +C +E A E + +G +
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451
Query: 361 SLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
+L+ L +V EA+ LI L ++ +V ++N + G
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDG 491
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F +M + + + F++L+ L +++ + +F E GI+ D +N
Sbjct: 393 VDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQ-GIRLDTVFFN 451
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ C A ++ M R ++P+ S+ LV G + ++ K+L ++
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K YN +H CK R+ +A +L EML KG+ P+ VTY+ ++G + G F EA
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+ Y M NS N Y ++ +CK + A +K + T ++
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGA 631
Query: 366 LAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
L + +A +L + +V+T+ I L
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENL 667
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 144/325 (44%), Gaps = 17/325 (5%)
Query: 76 LAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTE--HAV 130
+ ++ I+ L +A + G+ Q++ + RP+ H ++ +++G ++ + V
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPN-----NHTYTCLIHGYLSIGKWKEVV 257
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +EM H L+ + LL L E + +F + GIKP++ Y ++
Sbjct: 258 QMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRK-GIKPNVTIYGILLHG 316
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ S +S L M + P+ F + + K+ ++ + M + +
Sbjct: 317 YATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPN 376
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ Y I +LCKL + +A ++M+ +GM P+ +S +YG C +E+A++ +
Sbjct: 377 IVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFF 436
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ + G+ ++ + T++ +C+ G A + G P+ + +LV G
Sbjct: 437 EVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG 496
Query: 371 KVSEAKEL------IGLVKEKFTKN 389
++ EA +L IGL +K T N
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYN 521
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 9/295 (3%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALL 152
+Q ++E T PD+ S ++YG + E A F E+ + +R FN L+
Sbjct: 401 NQMIDEGMT-PDI-----FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLM 454
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
L E +R+ I+ G++PD+ +YN ++ C + A +L + +
Sbjct: 455 CNLCREGRVMEAQRL-IDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ ++ L+ G+ K + +D + + M G+ V YN +H L + + +EAK
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L M++ + N TY+ I G CK+ +EA K + + + L + M+ +
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
KGG E A+ A G VP+ T + L + E EL ++E T
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGT 688
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 5/239 (2%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N LL A+ + +F E G+ PD+ TYN ++ ++ S A + M
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMK-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 578
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ N ++ ++ G K ++ K+ + ++ + N+ I +L K +
Sbjct: 579 INSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRK 638
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A L + + G+ P+ TY K+G+ EE + + M +G +PNS + +
Sbjct: 639 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
V ++ GD A + ++K NF+ S + L E ++L + EK+
Sbjct: 699 VRWLLHRGDINRAGAY----LSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSLPEKY 753
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK-------PNS 286
D K+ M + + V +N + ++ + R C+ A L+ + ++ ++ P+S
Sbjct: 34 DALKLFDEMLTHARPASVRAFNQLLTAVSRAR-CSSASELVVSLFNRMIRECSIKVAPSS 92
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT-MVYFMCKGGDYETALGFCK 345
TY+ I FC+ G + + ++ +G N +V F+ ++ +C + A
Sbjct: 93 FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILL 152
Query: 346 ESIAK-GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK----FTKNVDTWNEIEAGL 400
+ + G P+ + L+ G + EA EL+ ++ + T NV T+ + GL
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGL 212
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 37/307 (12%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
E A+ F E L+ + +N+L+ L +V E + G PD+ TYN
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED-GCHPDIWTYN 328
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
VI C+ + S A ++ + K P+ +F ++ G+ K K + ++++ M Y
Sbjct: 329 IVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMY 388
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ YN ++ LCK K E +EM+ KG +PN++TY+ I FCK EEA
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA-LGFCK------------------- 345
MS GL P++ + T+++ C+ GD + A L F K
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508
Query: 346 ---------------ESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKN 389
E I+KG+ P+ T + LV G A+ V A L +V + F +
Sbjct: 509 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPS 568
Query: 390 VDTWNEI 396
+ T+ +
Sbjct: 569 MATFGRV 575
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 6/297 (2%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD + S + G+ ++ A+R + + E A+ ++ L +
Sbjct: 43 PDARTHTVRIKSFCITGRPHV---ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDA 99
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ +F E + + PD+ T+N V+ A C+ D + ++LA++ ++ + N + +
Sbjct: 100 RHLFDEMLRR-DVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIR 158
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G + + E+ +++ M+ Y + V YN + LCK K EA L M+++G P
Sbjct: 159 GLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP 217
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+ TY+ I G+CK +EA + + G P+ Y +++ +C GD E AL
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
E+ AK P+ SLV GL + A +++ +V++ ++ T+N + GL
Sbjct: 278 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 36/300 (12%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
MD + A+NA++ AL + + +V++ + G+ PD T+ IK+FC +
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRM-LSAGVAPDARTHTVRIKSFCITG 59
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L + + ++ +V G Y D + M R + V+ +N
Sbjct: 60 RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE------------ 303
+H+LC+ E+ ALL ++L +GM N T + +I G C+ G E
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY 179
Query: 304 ----------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
EA ++ R M N G P+ Y T++ CK + A
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
K++I KG+VP+ T SL+ GL V A EL + K K ++ +N + GL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E YGI PD TYN V+ C++ + EM K +PNA ++ L+ F
Sbjct: 381 LVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 440
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + E+ + V+ M + G+ +N IH C+ A L ++ KG +
Sbjct: 441 KINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATAD 500
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
T++ I + N + A+K + M + G P+ Y +V CK + + A E
Sbjct: 501 TFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEM 560
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++KG+VP+ T ++ LA +VSEA +I
Sbjct: 561 VSKGFVPSMATFGRVLNSLAMNHRVSEAVAII 592
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 6/220 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C D A + E K +KP+ + +LV G ++
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V+ M G + YN+ I+ LCK+ ++A ++++ + KG P+ T++ I G
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK + A + M G++P++ Y +++ +CK G + +E I KG PN
Sbjct: 369 YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 428
Query: 356 FTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN 389
T L+ +++ EA +I GLV + + N
Sbjct: 429 AITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFN 468
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 2/251 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E AV + MD + + V +N L+ L +E + ++ G PD TYN
Sbjct: 167 EEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQ-YLRRMMNQGCIPDDFTYNT 224
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C+ A +L + K P+ ++ +L+ G E E ++ +
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + +YN + LC+ A +++EM+ G P+ TY+ I G CK GN +A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G P+ + TM+ CK ++AL + G P+ T S++ GL
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404
Query: 367 AGASKVSEAKE 377
A K E E
Sbjct: 405 CKAGKAKEVNE 415
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 1/214 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ +N L +A +++ EE+ + N + I + + N E A
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + L +FN L+ D +F + + G DT+N +I A+
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEK-GYSATADTFNILIGAYSS 511
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A I EM K KP+ ++ LV G K + L M G ++
Sbjct: 512 KLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMAT 571
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ ++SL + +EA A++ M+ G+ P V
Sbjct: 572 FGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK 178
LY + A+ KEM+ ++H+ ++ L+ D+ +F E ++ G++
Sbjct: 447 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 505
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD YN +I+AFC+ + A IL +M ++ ++P+ +F ++ G+ +
Sbjct: 506 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 565
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L +M R G V YN IH L + K A ++LD+M G+ PN TY+ + G+
Sbjct: 566 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 625
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ +A +++ + SGL + +Y T++ CK G ++AL +E + N
Sbjct: 626 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 685
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKE 384
L+ G A V EA++L+ +KE
Sbjct: 686 YNILIDGWARRGDVWEAEDLMKQMKE 711
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 140/309 (45%), Gaps = 1/309 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +SI I+ ++ N +E KT+ N +++ I + Q+ E A E
Sbjct: 334 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCE 393
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + +++++ TI ++ + VF E K G KP + +Y ++ + +
Sbjct: 394 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF-ERLKECGFKPSIISYGCLLNLYVKIG 452
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A SI EM+ IK N ++ L+ GF + + + + M R G++ ++YN
Sbjct: 453 KVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYN 512
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I + CK+ A +L++M + M+P++ + I G+ G+ + A +M S
Sbjct: 513 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 572
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P Y +++ + + + A+ + G PN T ++ G A + + +A
Sbjct: 573 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 632
Query: 376 KELIGLVKE 384
E +KE
Sbjct: 633 FEYFTKIKE 641
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 9/311 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEM 136
+S+ IN + F EE+ R LQ +R + +I + + + A+ ++M
Sbjct: 476 YSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 534
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ +++ S AF ++ +A D K ++ + G P + TYN +I
Sbjct: 535 QKERMQPSNRAFRPIIEGYAVAGDMKSALDT-LDLMRRSGCVPTVMTYNALIHGLVRKHK 593
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+L +M I PN ++ ++ G+ + ++ G+K V +Y
Sbjct: 594 VQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYET 653
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ + CK + A A+ EM + + N+ Y+ I G+ + G+ EA+ + M G
Sbjct: 654 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 713
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS------ 370
+ PN Y + + CK GD + A +E + G PN T +L+ G A S
Sbjct: 714 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 773
Query: 371 KVSEAKELIGL 381
K E +L GL
Sbjct: 774 KCFEEMKLAGL 784
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 1/309 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
DR +++ I + + LE+++ + R I Y A + A+ T
Sbjct: 507 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL 566
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M +V +NAL+ L + V + GI P+ TY +++ +
Sbjct: 567 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPNEHTYTIIMRGYAA 625
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S D A+ ++ +K + + L+ K + + V + M + +
Sbjct: 626 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 685
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ I + EA+ L+ +M G+ PN TY+ +I CK G+ + A+K M
Sbjct: 686 YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMV 745
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+ GL PN Y T++ + + AL +E G P+ + LVT L + V
Sbjct: 746 DVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVM 805
Query: 374 EAKELIGLV 382
E G++
Sbjct: 806 EGSTYTGII 814
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 130/320 (40%), Gaps = 37/320 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I+ Y + HA TF+ M + + F +L+ A +A+D + +E K+ G
Sbjct: 270 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC-VEEMKSEG 328
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++ + TY+ +I F + +DS SA ++ E K N + ++ + E
Sbjct: 329 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAE 388
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP------------ 284
+++ ME G+ + + +Y+ +H ++ + + + + G KP
Sbjct: 389 ELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 448
Query: 285 -----------------------NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
N+ TYS I GF +F A + M SGL P+
Sbjct: 449 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 508
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
++Y ++ CK G+ + A+ ++ + P+ + ++ G A A + A + + L
Sbjct: 509 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 568
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
++ V T+N + GL
Sbjct: 569 MRRSGCVPTVMTYNALIHGL 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 5/170 (2%)
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
+++ V F PK P + +I + + D A + M + I+PNA F
Sbjct: 247 NWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVF 301
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+LV + ++ M+ G++ + Y++ I K+ A L E +
Sbjct: 302 TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKT 361
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
K N + YS+ I+ C+ GN E A++ M G+ VY +M++
Sbjct: 362 KLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMH 411
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
KP+ FG ++ + K + M G++ ++ +H+ R A +
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 319
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
++EM S+G++ VTYS I GF K + + A ++ S N +Y +++ C
Sbjct: 320 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 379
Query: 333 KGGDYETA 340
+ G+ E A
Sbjct: 380 QSGNMERA 387
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 13/208 (6%)
Query: 113 HAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV--- 167
H ++II+ G A + A F ++ E L+ V + LL A + + V
Sbjct: 614 HTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTRE 673
Query: 168 --FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
F + P+ I YN +I + D A ++ +M + PN ++ + +
Sbjct: 674 MSFQKIPRNTFI------YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 727
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + KV++ M G+K V Y I ++ A +EM G+KP+
Sbjct: 728 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 787
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+Y + E + I+S
Sbjct: 788 EASYHCLVTSLLSRATVMEGSTYTGIIS 815
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+ + I + K G+ A+ + M G+ PN+ V+ ++V+ D AL
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 319
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+E ++G T L++G A K+++++ L KE TK
Sbjct: 320 CVEEMKSEGLELTIVTYSILISGFA---KINDSQSADNLFKEAKTK 362
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++ A T+ EM + + V +N+++ AL A+ + V K G+ PD TYN
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYN 270
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C S A L +M ++P+ ++ L+ K + + K+ M +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K ++ Y + E LLD M+ G+ P+ +S I + K G ++A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M GL+PN+ Y ++ +CK G E A+ + ++ I +G P SL+ G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 366 LAGASKVSEAKELI 379
L +K A+ELI
Sbjct: 451 LCTCNKWERAEELI 464
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + F M + L+ + + LL E+ + ++ GI PD ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL-LDLMVRNGIHPDHYVFSIL 377
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A+ + A + ++M ++ + PNA ++GA++ K + ED + M G+
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
G +YN IH LC K A+ L+ EML +G+ N++ ++ I CK+G E++K
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +M G+ PN Y T++ C G + A+ ++ G PN T +L+ G
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 368 GASKVSEAKELIGLVKE----KFTKNVDTWNEIEAGLPQ 402
K+S ++ + L KE + ++ T+N I GL Q
Sbjct: 558 ---KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 169/366 (46%), Gaps = 15/366 (4%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL-SEANYFNGI 94
L +++++ AL LL ++ R P D ++++ IN E +
Sbjct: 168 LCDENRSQEALELLHMMADD-------RGGGSPP----DVVSYTTVINGFFKEGDSDKAY 216
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
S Y E+ R L + + I +A + A+ M ++ + +N++L
Sbjct: 217 STY-HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ KE F++ ++ G++PD+ TY+ ++ C++ A I M ++ +KP
Sbjct: 276 YCSSGQPKEAIG-FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+++G L+ G+ + +++ +L +M R G+ ++++ I + K K +A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+M +G+ PN+VTY I CK G E+A ++ M + GLSP + VY ++++ +C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTW 393
+E A E + +G N S++ +V E+++L L V+ NV T+
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 394 NEIEAG 399
N + G
Sbjct: 515 NTLING 520
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
AF LL L K + + + G P++ +YN ++K C+ + S A +L
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 207 M--DR-KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M DR P+ S+ ++ GF+KE + M G+ V YN I +LCK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +A +L+ M+ G+ P+ +TY+ ++G+C G +EA F + M + G+ P+
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y ++ ++CK G A +G P TT +L+ G A + E L+ L+
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 7/219 (3%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-V 235
+ PDL TY +I C + ++ L + +K + +A +F L+ G +++ D +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK---GMKPNSVTYSHF 292
+ VL+ M G V YN+ + LC + EA LL M G P+ V+Y+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GF K+G+ ++A Y M + G+ P+ Y +++ +CK + A+ + G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+P+ T S++ G + + KE IG +K+ + V+
Sbjct: 263 MPDCMTYNSILHGYCSS---GQPKEAIGFLKKMRSDGVE 298
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N E A EM + + + FN+++ + E +++F E G+KP++
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVI 512
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I +C + A +L+ M +KPN ++ L+ G+ K + ED + + M
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E G+ + YN+ + L + R+ A AK L + G + TY+ ++G CK+
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A + ++ + L + + M+ + K G + A + G VPN+ T + +
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 363 VTGLAGASKVSEAKEL 378
+ G + E +L
Sbjct: 693 AENIIGQGLLEELDQL 708
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 156 TIAKDYKEVKR-----VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
T+ Y ++ R V + ++ G+ PD+ TYN +++ ++ +++A + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ S++ ++ G K + +D ++ Q + +K +N+ I +L K+ + EA
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
K L S G+ PN TY G EE + + M ++G + +S + +V
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 730
Query: 331 MCKGGDYETA 340
+ + G+ A
Sbjct: 731 LLQRGEITRA 740
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 7/311 (2%)
Query: 82 INKLSEANYFNGISQYLEELKTRP-DLQNERFHAHSIILYG--QANMTEHAVRTFKEMDE 138
I+ L E G ++ L + + +L N ++ I++ G + + E A++ +M
Sbjct: 484 IHGLCEGKNMKGATEVLRTMVNKGMELDNITYN---IMIQGCCKDSKIEEALKLRDDMIR 540
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+ FN+++ A +E + + K G++PD+ +Y +I +C++ D
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM-KIEGVQPDVVSYGTIIDGYCKAKDIQ 599
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A L E+ +KPNA + AL+ G+ + VL ME G++ Y +
Sbjct: 600 KANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLM 659
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
H +C EAK + ++ ++ V Y+ I G CK G +EA ++ M + +
Sbjct: 660 HWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIP 719
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
PN Y T++Y CK G+ E A E ++ G VP+ + +LVTG + + +A E
Sbjct: 720 PNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEK 779
Query: 379 IGLVKEKFTKN 389
+ T+N
Sbjct: 780 AAEISSIMTQN 790
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 150/327 (45%), Gaps = 5/327 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F I IN L ++ F + L E++ NE I + + A+R F E
Sbjct: 302 VTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDE 361
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M +++ + +N + AL + + +R+ E T G+ +N V+ + +
Sbjct: 362 MVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLST-GMTIHSGLFNSVVAGLLQRT 420
Query: 196 DS-SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMMERYGMKSGVSM 253
S +++EM ++ +KPN + A + ++++ V L+M+E+ G+ ++
Sbjct: 421 GRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEK-GLCINIAT 479
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
N IH LC+ + A +L M++KGM+ +++TY+ I G CKD EEA K M
Sbjct: 480 SNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMI 539
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G P++ ++ ++++ C G E AL + +G P+ + +++ G A +
Sbjct: 540 RKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQ 599
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAG 399
+A E + L+ N +N + G
Sbjct: 600 KANEYLNELMACGLKPNAVIYNALIGG 626
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 2/284 (0%)
Query: 96 QYLEE-LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
+ LEE L T + + F++ L + E VR EM + ++ + A
Sbjct: 392 RILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQ 451
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
L + ++E ++++ + G+ ++ T N +I CE + A +L M K ++
Sbjct: 452 LCQGRRHQEAVGIWLKMLEK-GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+ ++ ++ G K+ K E+ K+ M R G K M+N IH+ C L K EA LL
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLL 570
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+M +G++P+ V+Y I G+CK + ++A ++ + GL PN+ +Y ++ +
Sbjct: 571 GQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRN 630
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
G+ A+G + G P T SL+ + A V EAK +
Sbjct: 631 GNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTM 674
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 39/311 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F + + SV NALL AL + +VF E + P+ +Y +I
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236
Query: 189 KAFCESSDSSSAYSILAE-------------------------------------MDRKS 211
KA C+ + IL++ M+
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
+ P+ +FG L+ G + +++ +V +L+ ME G+ + N I C+ EA
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY-F 330
L DEM+SK MK +VTY+ CK+G E A++ M ++G++ +S ++ ++V
Sbjct: 357 RLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL 416
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKN 389
+ + G E+ + E + +G PN M + L + EA + + ++++ N
Sbjct: 417 LQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCIN 476
Query: 390 VDTWNEIEAGL 400
+ T N + GL
Sbjct: 477 IATSNALIHGL 487
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 40/294 (13%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYNR 186
A+ F+EM+E +N L+ L KD + E+ ++ + G P + TY
Sbjct: 109 EAMEIFREMEEKGSAPDSFTYNILINGL--CKDAQLEMGVSLMDEMQARGFSPTVVTYTT 166
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC + +A IL EM+ + I PN ++ AL+ G + E VL+ M+ G
Sbjct: 167 LIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRG 226
Query: 247 MKS--GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ V Y IH LC+ LDEM+ G PN+ TY+ I+G C+ G+F E
Sbjct: 227 NECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLE 286
Query: 305 -----------------------------------AKKFYRIMSNSGLSPNSSVYFTMVY 329
A++ +M G++P+ Y +++
Sbjct: 287 AAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQ 346
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+C G + ALG +E AKG VPN T +L+ G A + A +L+ +K
Sbjct: 347 GLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMK 400
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 15/289 (5%)
Query: 74 DRLAFSIAINKLS-EANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHA 129
D ++I IN L +A G+S ++E++ R P + H G+ + A
Sbjct: 125 DSFTYNILINGLCKDAQLEMGVS-LMDEMQARGFSPTVVTYTTLIHGFCTAGRV---DAA 180
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP--KTYG--IKPDLDTYN 185
+ EM+ + + + AL+ L D EV+R + K G P++ TY
Sbjct: 181 MDILDEMEHRGITPNTVTYTALIQGLC---DCGEVERAILVLKEMKLRGNECCPNVVTYT 237
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++I C+ L EM PN +++ AL+ G ++ + + +L M
Sbjct: 238 QLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAI 297
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + V +YN I LCK+ + A+ + M+ KG+ P+ TY+ I G C G +EA
Sbjct: 298 GCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEA 357
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+ M G+ PNS Y T++ + + AL E + G +P
Sbjct: 358 LGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406
>gi|297832386|ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329915|gb|EFH60334.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 462
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
PD TYN ++K C+ D Y + EM D +KP+ SF L+ + +
Sbjct: 191 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 250
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ + G K +YN + C L K +EA + +M +G++P+ +TY+ IYG
Sbjct: 251 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLS 310
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G EEA+ + + M ++G P+++ Y +++ MC+ G+ AL +E A+G PN
Sbjct: 311 KSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDC 370
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
T +L+ GL A + + EL L+K K
Sbjct: 371 TYNTLLHGLCKARLMDKGMELYELMKSSGVK 401
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 16/291 (5%)
Query: 51 SESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDL 107
S SN ++L + L P D++ IA+ L E + ++EL + PD
Sbjct: 138 SISNVHRVLNLMVNNGLEP----DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 193
Query: 108 QNERFHAHSIILYGQANMTE-HAVRTF-KEM-DEHKLRHSVGAFNALLLALTIAKDYKEV 164
+ ++ +L + H V F EM D+ ++ + +F L+ + +K+ +E
Sbjct: 194 -----YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 248
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ + G KPD YN ++K FC S S A + +M + ++P+ ++ L+
Sbjct: 249 MYLVSKLGNA-GFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIY 307
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G K + E+ L+ M G + + Y ++ +C+ + A +LL+EM ++G P
Sbjct: 308 GLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAP 367
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
N TY+ ++G CK ++ + Y +M +SG+ ++ Y T+V + K G
Sbjct: 368 NDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKLETNGYATLVRSLVKSG 418
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 41/279 (14%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM--DRKSIKPNASSFG 220
+ K +F T I DL +N V++++ + + + + + +P S+F
Sbjct: 66 DAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFQHILKSQPNFRPGRSTFL 125
Query: 221 ALV--AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
L+ A + +V++VL +M G++ ++ + SLC+ + EAK L+ E+
Sbjct: 126 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 185
Query: 279 SKGMKPNSVTYS------------HFIYGF------------------------CKDGNF 302
K P++ TY+ H +Y F C N
Sbjct: 186 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 245
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EA + N+G P+ +Y T++ C A+G K+ +G P+ T +L
Sbjct: 246 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTL 305
Query: 363 VTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
+ GL+ + +V EA+ L +V + + T+ + G+
Sbjct: 306 IYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 344
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 8/274 (2%)
Query: 104 RPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
+PD+ A++ ++ G +A+ +HA + M + V +N L+
Sbjct: 143 KPDV-----FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRL 197
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
RV + K KP + TY +I+A A +L EM + ++P+ ++
Sbjct: 198 DLALRVMDQLLKD-NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+V G KE + + L + + G +GVS YN+ + L K + L+ +ML KG
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+PN +TYS I C+DG +EAK ++M L+P+ Y ++ +C+ G + A+
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
F + I+ G +P+ + S++ L EA
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEA 410
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 8/252 (3%)
Query: 141 LRHSV--GAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPDLDTYNRVIKAFCE 193
L+H V G ++L + K + +K++ +E + +G KPD+ YN VI FC+
Sbjct: 100 LQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCK 158
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L M ++ +P+ ++ L+ F + + +V+ + + K V
Sbjct: 159 ADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVIT 218
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + I + EA LLDEMLS+G++P+ TY+ + G CK+G + A +F +S
Sbjct: 219 YTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRIS 278
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+G S Y ++ + G +E + + KG PN T +L+T L K+
Sbjct: 279 KNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKID 338
Query: 374 EAKELIGLVKEK 385
EAK ++ ++KEK
Sbjct: 339 EAKNVLKVMKEK 350
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 156/367 (42%), Gaps = 44/367 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D A++ I+ +A+ + S+ L+ +K R PD+ + G+ ++ A+
Sbjct: 145 DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL---AL 201
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R ++ + + +V + L+ A E ++ E + G++PD TYN V+
Sbjct: 202 RVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM-LSRGLRPDRYTYNVVVNG 260
Query: 191 FCESS------------------DSSSAYSIL-----------------AEMDRKSIKPN 215
C+ S Y+IL ++M K +PN
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ ++ K ++ VL++M+ + Y+ I +LC+ K A LD
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLD 380
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+M+S G P+ ++Y+ + CK+GN +EA + + G PN+ Y T+ + G
Sbjct: 381 DMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI--GLVKEKFTKNVDTW 393
D ALG E ++ G P+ T SL++ L V +A EL+ EK V ++
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISY 500
Query: 394 NEIEAGL 400
N + GL
Sbjct: 501 NTVLLGL 507
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+S+ + L M + KP+ L+ GF+ +K E +V++++E++G K V
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I CK + A +LD M +G +P+ VTY+ I FC G + A +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ P Y ++ G + A+ E +++G P+ T +V G+
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266
Query: 372 VSEAKELIGLV-KEKFTKNVDTWN 394
+ A E + + K V T+N
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYN 290
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 20/337 (5%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
+ E LDR AF ++++S+ G+S Y L+ DL NE YG+ M
Sbjct: 260 GMCKEGMLDR-AFEF-LSRISKNGCVAGVSTYNILLR---DLLNEGKWE-----YGEKLM 309
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++ V K + + + +S L+ AL E K V ++ K + PD +Y+
Sbjct: 310 SDMLV---KGCEPNPITYS-----TLITALCRDGKIDEAKNV-LKVMKEKALAPDGYSYD 360
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I A C A L +M P+ S+ +++A K ++ + + +
Sbjct: 361 PLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV 420
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G YN +L A ++ EMLS G+ P+ +TY+ I C+DG ++A
Sbjct: 421 GCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA 480
Query: 306 KKFYRIMSNS-GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+ M S P Y T++ +CK A+ + +G +PN TT L+
Sbjct: 481 IELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ 540
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLP 401
G+ A +A EL L+ + D++ + P
Sbjct: 541 GIGFAGWRYDAMELANLLVNMDAISEDSFKRFQKIFP 577
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 36/304 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + E A M + L+ S+ +NA++ L Y K + IE G+ P
Sbjct: 11 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI-GLSP 69
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++ C + S A I EM R+ + P+ SF +L+A F + +
Sbjct: 70 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYF 129
Query: 240 QMMERYGM---------------KSG--------------------VSMYNVRIHSLCKL 264
+ M+++G+ ++G V YN ++ LCK
Sbjct: 130 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 189
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ +A L DEM+ +G P+ T++ I+G C+DGN +A + M+ + P+ Y
Sbjct: 190 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAY 249
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
T++ CK G+ E A I++ PN T L+ VSEA L ++ E
Sbjct: 250 NTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIE 309
Query: 385 KFTK 388
K K
Sbjct: 310 KGIK 313
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 104/203 (51%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I A+C A+ I+ M K +KP+ ++ A++ G K+ +Y +L M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ + YN + C+ +EAK + EML +G+ P+ V++S + F ++ +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A ++R M GL P++ +Y +++ C+ G+ AL E + +G V + ++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 363 VTGLAGASKVSEAKELIGLVKEK 385
+ GL +++A +L + E+
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVER 205
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 115 HSIILYG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++++++G NM E A++ EM E V A+N +L L K + ++F E
Sbjct: 144 YTVLMHGYCRNGNMLE-ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 202
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
+ G PD T+ +I C+ + + A S+ M +++IKP+
Sbjct: 203 VER-GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD---------------- 245
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ YN I CK+ + +A L D M+S+ + PN +TY
Sbjct: 246 -------------------IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 286
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I +C G+ EA + + +M G+ P T++ C+ GD A F IAKG
Sbjct: 287 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346
Query: 352 WVPNFTTMKSLV 363
P+ + +L+
Sbjct: 347 VAPDHISYNTLI 358
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 42/237 (17%)
Query: 98 LEELKTRPDLQNE----RFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
LE LK R ++ + A++ IL G + M A + F EM E F L
Sbjct: 158 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 217
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ + + +F + IKPD+ YN +I FC+ + A + M +
Sbjct: 218 IHGHCQDGNMTKALSLFGTMTQR-NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 276
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
I PN ++G L I++ C + +EA
Sbjct: 277 IFPNHITYGIL-----------------------------------INAYCSVGHVSEAF 301
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
L D M+ KG+KP VT + I G+C+ G+ +A +F M G++P+ Y T++
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VTY+ I +C++G EEA + M++ GL P+ Y ++ +CK G Y A G E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ G P+ TT +L+ SEAKE+ G
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFG 95
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 91/224 (40%), Gaps = 42/224 (18%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ---ANMTEHA 129
LD +A++ +N L + + +E+ R L + F+ + +++G NMT+ A
Sbjct: 174 LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD--FYTFTTLIHGHCQDGNMTK-A 230
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ F M + ++ + A+N L+ + ++ ++ + + I P+ TY +I
Sbjct: 231 LSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW-DGMISRKIFPNHITYGILIN 289
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A+C S A+ + M K IKP + ++ G+
Sbjct: 290 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY----------------------- 326
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
C+ ++A L M++KG+ P+ ++Y+ I
Sbjct: 327 ------------CRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+AN A + M E + FN ++ AL E +IE ++ G+ P +
Sbjct: 22 KANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYG-YIETMRSMGVSPTI 80
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC+ A IL EM + +PN ++ + G K K +D + +
Sbjct: 81 VTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRA 140
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M ++ V Y I LC+ K AEA +LLDEM + G P Y+ + CK
Sbjct: 141 MTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSR 200
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA K ++ M+ SG+ P+ + MV+ C+G + AL ++ + G P +
Sbjct: 201 INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNT 260
Query: 362 LVTGLAGASKVSEAKELI 379
L+ L A +VSEA L+
Sbjct: 261 LIDALNRAGRVSEAYRLL 278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E G P+ +N ++ A C+ S+ AY + M + P ++ L+ GF
Sbjct: 32 LVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFC 91
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KEEK ++LQ M G + YN +H LCK K +A AL M K ++ +
Sbjct: 92 KEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVY 151
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
Y+ I G C+ G EA M NSG P Y ++ ++CKG A K
Sbjct: 152 GYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRM 211
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
G +P++ T +V G ++ +A L+ +K
Sbjct: 212 TGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + T+ ++ C+++ + A+ ++ M + PNA F ++ KE + +
Sbjct: 5 GCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ + YN+ I CK K A +L EM +G +PN VTY+ F++G
Sbjct: 65 YGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A +R M+ + + Y T++ +C+ G A E G VP
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
++++ L S+++EA +L
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKL 207
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 59 LEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAH 115
+E R+ ++P + ++I I+ + + + L+E+ R P+ H
Sbjct: 68 IETMRSMGVSPTI----VTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLH 123
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+ YG+ + A+ F+ M E K+R V + L+ L A E + E +
Sbjct: 124 GLCKYGK---VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS- 179
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P YN ++ C+ S + A+ + M I P+ +FG +V G+ + + +D
Sbjct: 180 GCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+LQ M+ G+ +YN I +L + + +EA LL EM+S+G+ PNS TY+
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYA 294
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K P +FG LV G K + D +++++M G ++N + +LCK +
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
AEA ++ M S G+ P VTY+ I GFCK+ A + + M+ G PN Y T
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ +CK G + AL + K + +L+ GL A K++EA L+
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLL 173
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ D+ Y +I C++ + AYS+L EM+ P + A+++ K + + +
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K+ + M G+ + + + C+ + +A LL +M S G+ P V Y+ I
Sbjct: 206 KLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDAL 265
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+ G EA + + M + GLSPNS Y M
Sbjct: 266 NRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V + + + LCK + +A L++ M +G PN++ ++ + CK+G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + M + G+SP Y ++ CK AL +E +G PN T +
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
+ GL KV +A L + ++K +V + + GL Q
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQ 162
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 5/300 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
Q ++EL RP R +A + L+ + E A + EM + L V ++ A
Sbjct: 254 QKMKELGWRP---TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
RVF E + G +P++ TYN +++ FC + A ++L +M ++P+
Sbjct: 311 CREGRMSGAVRVF-ESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPD 369
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ G + ++L++ME G+ + YNV I +LCK K EA +L D
Sbjct: 370 VVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ +G++PNSVT++ I G CK G F+ A F M ++G +P++ Y + +CK
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTK 489
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ L F E + K P+ ++ L A + G +V + + +V T+
Sbjct: 490 GSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYT 549
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 7/308 (2%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+Q L R + + F +S+IL Y + E A F +M ++ AL+
Sbjct: 148 AQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIE 207
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
A E +F E +PD+ T+ ++K C++ +L +M +
Sbjct: 208 GFCEAGRIDEALELFREM-----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWR 262
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P ++ ALV + +E+K E+ K+L M G+ V + +++ C+ + + A +
Sbjct: 263 PTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRV 322
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+ M KG +PN TY+ + GFC G +A M G+ P+ Y ++ C
Sbjct: 323 FESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDT 392
G +A + G + T L+ L KV EA L GL N T
Sbjct: 383 DGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVT 442
Query: 393 WNEIEAGL 400
+N + GL
Sbjct: 443 FNTVINGL 450
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 3/257 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIA-KDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
AVR F+ M +V +NA++ A K YK + ++ + G++PD+ TYN +
Sbjct: 319 AVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM--ALLDQMRECGVEPDVVTYNLL 376
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I+ C SA+ +L M+ + + ++ L+ K K ++ + +E G+
Sbjct: 377 IRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ +N I+ LCK K A L+ M+S G P++ TYS FI CK +E
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLF 496
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
F M + P++ Y ++ + +Y A + +++G P+ T + V
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYC 556
Query: 368 GASKVSEAKELIGLVKE 384
++ EA+ ++ +K+
Sbjct: 557 NEGRLDEAENVVTEMKK 573
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 96/241 (39%), Gaps = 15/241 (6%)
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
R+F + P TYN +I+A C +D A L+ M R +P+A +F +L+ G
Sbjct: 114 RLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+ + ++ E + + M G Y I C+ + EA L EM +P+
Sbjct: 174 YCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPD 229
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
T++ + G C G EE + M G P + Y +V C+ E A
Sbjct: 230 MYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILN 289
Query: 346 ESIAKGWVPNFTTMKSLVTG------LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
E G +P T +V ++GA +V E+ G NV T+N I G
Sbjct: 290 EMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC-----EPNVWTYNAIVQG 344
Query: 400 L 400
Sbjct: 345 F 345
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 116/315 (36%), Gaps = 36/315 (11%)
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+I +N +G + E ++ + N + + + A A+ +M E
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+ V +N L+ I R+ + + G+ D TYN +I A C++
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIGSAFRL-LRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A S+ ++ + I+PN+ +F ++ G K K++ L+ M G Y+ I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482
Query: 259 HSLCKLRKCAEAKALLDEML-----------------------------------SKGMK 283
+LCK + E +DEML S+G
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VTY+ + +C +G +EA+ M ++ Y T++ G + A+
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTI 602
Query: 344 CKESIAKGWVPNFTT 358
K +PN T
Sbjct: 603 LKHMTGVASMPNHFT 617
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 61/113 (53%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ + + M + S+ +A ++ +++ GF +E + ++V ++ +M+ + +YN
Sbjct: 648 ADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
++ CKLR ++A ALL M+ G PN + Y + + G +G + AK+ +R
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFR 760
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 128/321 (39%), Gaps = 21/321 (6%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ IN L +A F+ +LE + + + ++ I + ++ + E
Sbjct: 441 VTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDE 500
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ S + ++ L ++Y R++ + + G PD+ TY ++A+C
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQM-VSQGCSPDVVTYTTSVRAYCNEG 559
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +++ EM + +A ++ L+ G + + +L+ M G+ S + +
Sbjct: 560 RLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT--GVASMPNHFT 617
Query: 256 VRI------------HSLCKLRKCAEAKALLD-----EMLSKGMKPNSV-TYSHFIYGFC 297
I H K + L D E++ K P+S TY + GF
Sbjct: 618 FFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFS 677
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
++ +E +M L N +Y +V CK Y A I G++PN
Sbjct: 678 EERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLI 737
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
+ L++GL + AKE+
Sbjct: 738 FYQYLLSGLTAEGQADRAKEI 758
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ F+ EHK +L K +K V + E + G
Sbjct: 73 ITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A S+ E+ + ++P+ SF L+ G+ + ++
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEM+ G+ PN VT++ I G
Sbjct: 192 RLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G+ + A + Y+ M G SP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F E+ + LR SV +FN L+ D E R+ + GI+PD+ TY+ +I
Sbjct: 155 AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGS-GIQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S + A + EM + PN +F L+ G K + + + M R G
Sbjct: 214 NGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I G CK+G+ E A K+
Sbjct: 274 PDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKY 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 334 KKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 369 ASKVSEAKELI 379
V +L+
Sbjct: 394 KGDVKMGSKLL 404
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ + + + VF E K +G++P + ++N ++ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITK-WGLRPSVVSFNTLMNGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M I+P+ ++ L+ G KE K D N++ M G+
Sbjct: 183 RLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGV 242
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK A EML +G P+ +TY+ IYG CK+G+ ++A+ M
Sbjct: 243 TFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEM 302
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ETA + K I + + +L++GL +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 373 SEAKELI 379
A++++
Sbjct: 363 VGAEKML 369
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 271 GFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K + M + ++ Y I LC+ + A+ +L EMLS G+KP++ TY+ I
Sbjct: 331 FKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSP 319
FCK G+ + K + M G P
Sbjct: 391 FCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
DT +V++ F + S + E+ + F L+ F KE + V
Sbjct: 101 FDTCRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFD 160
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+ ++G++ V +N ++ +L E L M G++P+ TYS I G CK+
Sbjct: 161 EITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKES 220
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+A + + M +GL PN + T++ CK G + A+ KE + +G+ P+ T
Sbjct: 221 KMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYN 280
Query: 361 SLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ GL + +A++LI GL +K T
Sbjct: 281 TLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKIT 313
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ + EHKL +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG-FYEDILECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 312 FTYTTLIDGCCKEGDLDTAFE 332
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ D + + VF K +G++P + +YN ++ + D + + + M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD +TA K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 ---------VKEKFTKNVDTW 393
+ +F K D W
Sbjct: 378 KPDIGTYTMIINEFCKKGDVW 398
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 214 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ + A +
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 334 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCK 393
Query: 369 ASKVSEAKELI 379
V + +L+
Sbjct: 394 KGDVWKGSKLL 404
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 131/294 (44%), Gaps = 28/294 (9%)
Query: 123 ANMT-EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGI-KP 179
AN T H + ++ M H + + L+ + +++ K VF +T G +
Sbjct: 5 ANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 180 DLDTYNRVIKAFCESS---DSSSAYSILAEMD--------RKSIKPNAS-SFGALVAGFY 227
D+ ++ +I A+ ES D+ Y++ E RK ++ + LV GFY
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
ED+ + G + + +N+ +H CK A+++ D + G++P+ V
Sbjct: 125 -----EDILEC-------GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 172
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y+ + G+ + G+ +E + M SG+ P+ Y ++ +CK + A E
Sbjct: 173 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+ KG VPN T +L+ G +V A E+ ++ + + ++ T+N + GL
Sbjct: 233 LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 2/274 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A R EM L + FN +L+ +D E +RVF E + G+ PDL +++
Sbjct: 311 ERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQR-GVVPDLISFSS 369
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ F + + A + +M + P+ + L+ G+ + + K+ M G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
V YN ++ LC+ + +A L EM+ +G+ P+ T + I+G+CKDGN +A
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M+ L P+ Y T++ CK G+ E A + I++ P++ + L+ G
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
VSEA L +KEK K + T N I G
Sbjct: 550 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ DL TYN ++ A+C S A+ ++ M K +KP ++ AL+ G KE YE
Sbjct: 254 GVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERA 313
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL M G+ + +N + C+ EA+ + +EML +G+ P+ +++S +
Sbjct: 314 KRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGV 373
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F ++G A ++ M GL P++ +Y ++ C+ D AL E + +G V +
Sbjct: 374 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ GL + +A EL
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADEL 456
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 140/307 (45%), Gaps = 3/307 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++FS + S Y E++K + + + I Y + + A++
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM E V +N LL L K + +F E + G+ PD T +I +C+
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER-GVFPDFYTLTTLIHGYCK 481
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVS 252
+ + A S+ M +S+KP+ ++ L+ GF K + E ++ M+ R S +S
Sbjct: 482 DGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYIS 541
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+++ I+ C L +EA L DEM KG+KP VT + I G+ + GN +A F M
Sbjct: 542 -FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTM 600
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ P+ Y T++ K +++ A +G +PN T +++ G + ++
Sbjct: 601 ISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRM 660
Query: 373 SEAKELI 379
EA+ ++
Sbjct: 661 QEAEMVL 667
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 13/289 (4%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYG---QANMT 126
+D + ++ +N L + + +E+ R PD F+ + +++G NMT
Sbjct: 432 MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD-----FYTLTTLIHGYCKDGNMT 486
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F+ M L+ V +N L+ + ++ K ++ + + I P +++
Sbjct: 487 K-ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDM-ISREIFPSYISFSI 544
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S A+ + EM K IKP + ++ G+ + N L M G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ YN I+S K A L++ M +G+ PN VTY+ + GF + G +EA+
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAE 664
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
M + G++P+ S Y +++ + + A E + +G+VP+
Sbjct: 665 MVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 6/272 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK--PDLDTYN 185
A R F EM + + + +F++++ + E+ R F K G+ PD Y
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIV---GVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I +C + D S A + EM + + ++ L+ G + + +D +++ + M
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ IH CK +A +L + M + +KP+ VTY+ + GFCK G E+A
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K+ + M + + P+ + ++ C G A E KG P T +++ G
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
A +S+A + + ++ E + T+N +
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V F+ L+ A+ +E F + + G ++ N ++ A + A+ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAF-QLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVY 212
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+ + N + +V K+ K ++V L ME G+ + + YN +++ C+
Sbjct: 213 EDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+EA L+D M KG+KP TY+ I G CK+G++E AK+ M GL PN++ +
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
M+ C+ D A E + +G VP+ + S+V
Sbjct: 333 NPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV 371
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 11/316 (3%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG- 121
+ L P D + ++I IN + +G + E+ R + + ++ +L G
Sbjct: 391 KGVGLVP----DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD--VVTYNTLLNGL 444
Query: 122 -QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-FIEFPKTYGIKP 179
+ M + A FKEM E + L+ KD K + E +KP
Sbjct: 445 CRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY--CKDGNMTKALSLFETMTLRSLKP 502
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN ++ FC+ + A + +M + I P+ SF L+ GF + ++
Sbjct: 503 DVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLW 562
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ G+K + N I + ++A L+ M+S+G+ P+ +TY+ I F K+
Sbjct: 563 DEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKE 622
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
NF+ A M GL PN Y ++ + G + A + I KG P+ +T
Sbjct: 623 ENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTY 682
Query: 360 KSLVTGLAGASKVSEA 375
SL+ G + EA
Sbjct: 683 TSLINGYVSKDNMKEA 698
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KP L TYN +I C+ A +L EM + PNA++F ++ ++E +
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V M + G+ + ++ + + + A A ++M G+ P++V Y+ I G
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ + A K M G + Y T++ +C+G + A KE + +G P+
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
F T+ +L+ G +++A L + +V T+N + G
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ TYN ++ C A + EM + + P+ + L+ G+ K+
Sbjct: 429 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA 488
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M +K V YN + CK+ + +AK L +M+S+ + P+ +++S I G
Sbjct: 489 LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILING 548
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G EA + + M G+ P T++ + G+ A F I++G P+
Sbjct: 549 FCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPD 608
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
T +L+ A LI ++E+ N+ T+N I G
Sbjct: 609 CITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 653
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 6/199 (3%)
Query: 183 TYNRVIKAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ +I+ + ++ + S A+ +L ++ + ++ AL+ K + KV
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLR---KRGFCVSINACNALLGAIVKVGWVDLAWKVY 212
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ + G V N+ +++LCK K L EM KG+ + VTY+ + +C+
Sbjct: 213 EDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA M+ GL P Y ++ +CK G YE A E + G PN T
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332
Query: 360 KSLVTGLAGASKVSEAKEL 378
++ V EA+ +
Sbjct: 333 NPMLVESCRKEDVWEAERV 351
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 64/161 (39%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ + + K + ++ Q++ + G ++ N + ++ K+ A + ++ +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G N T + + CKDG + + M G+ + Y T+V C+ G
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
A G KG P T +L+ GL AK ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVL 317
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 2/252 (0%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+MTE+ + + + + L +N +++A R F ++ G++ D T
Sbjct: 158 DMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRES-GMQMDTYT 216
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N ++ +C +SD A +L M + N S+ L+ G Y+ + ++ MM
Sbjct: 217 CNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMV 276
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G + MY + I LCK + +A+ LLDEM +G+ P+ TY+ I G+CK G +
Sbjct: 277 QDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMK 336
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A +M +G +P+ Y +++Y +C GG + A +IA+G+ P T +L+
Sbjct: 337 DALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLI 395
Query: 364 TGLAGASKVSEA 375
G A ++ +A
Sbjct: 396 NGYCKAERIDDA 407
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 6/250 (2%)
Query: 118 ILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++YG Q A+ +M E + V A+ L+ ++ R+F E +
Sbjct: 499 LIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF-EMMEKN 557
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD YN + A C+S + AYS L RK + ++ +LV GF K +
Sbjct: 558 GLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFA 614
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G K+ + Y+V + +LCK +K EA ++LD+M G+K N V Y+ I
Sbjct: 615 AVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISE 674
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+G + AK + M +SG P+++ Y + CK G E A E G P+
Sbjct: 675 MIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPD 734
Query: 356 FTTMKSLVTG 365
T + G
Sbjct: 735 VVTYHIFING 744
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Query: 136 MDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+DE LR SV +NA++ + K+ + + G PD TYN +I C
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN-GCNPDDWTYNSLIYGLC 365
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A +L + P +F L+ G+ K E+ +D +V M K +
Sbjct: 366 -GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQ 424
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y V I+ L K + EAK L+EM + G+ PN V Y+ I G+CK G A + +++M
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLM 484
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG------L 366
+ G PN+ Y +++Y + + A+ + G P +L+ G
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEF 544
Query: 367 AGASKVSEAKELIGLVKEKFTKNVDT 392
A ++ E E GL ++ NV T
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLT 570
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 16/286 (5%)
Query: 114 AHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
A++ ++ GQ E +A R F+ M+++ L A+N L AL + +E +
Sbjct: 530 AYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR- 588
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
G+ TY ++ F ++ ++ A ++ +M + K + ++ L+ K++K
Sbjct: 589 ---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ +L M G+K + Y + I + K K AK+L +EM+S G KP++ TY+
Sbjct: 646 LNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
FI +CK G EEA+ M G++P+ Y + G + A K +
Sbjct: 706 FISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDAS 765
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIE 397
PN T L+ S L+ + WN IE
Sbjct: 766 CEPNCWTYWLLLKHFLKMS----------LINAHYIDTSGMWNWIE 801
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
V IE G K DL TY+ +++A C+ + A SIL +M +K N ++ +++
Sbjct: 616 VLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEM 675
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
KE K++ + M G K + Y V I S CK+ + EA+ L+ EM G+ P+
Sbjct: 676 IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDV 735
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV-----------YFMCKGG 335
VTY FI G G + A + M ++ PN Y+ ++ +++ G
Sbjct: 736 VTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSG 795
Query: 336 -----DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ T + + G P T S++ G A+++ EA L+
Sbjct: 796 MWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
K DL Y +I + A L EM + PN + +++ G+ K +
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALE 479
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
V ++ME G Y I+ L + +K +A AL+ +M G+ P + Y+ I G C
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQC 539
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K F+ A + + +M +GL+P+ Y + +CK G E A F + KG V
Sbjct: 540 KKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKV 596
Query: 358 TMKSLVTGLAGASKVSEAKELI 379
T SLV G + A A LI
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLI 618
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 7/350 (2%)
Query: 48 LLKSESNPEKILEICRAAA--LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
L+ E+I + R + ++ LD A+ + IN L + + L E+
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453
Query: 106 DLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
N + I Y + M A+ FK M+ + + +L+ L K +
Sbjct: 454 LAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+ + + GI P + Y +I+ C+ + +A+ + M++ + P+ ++ L
Sbjct: 514 ALITKMQED-GITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDA 572
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K + E+ L R G+ Y + K A L+++M+++G K +
Sbjct: 573 LCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
TYS + CK EA M+ SG+ N Y ++ M K G ++ A
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFN 689
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
E I+ G P+ TT ++ ++ EA+ LIG + ++ T +V T++
Sbjct: 690 EMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYH 739
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 17/278 (6%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+HA F EM + S + + + +E + + E + G+ PD+ TY+
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERD-GVTPDVVTYHI 740
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE-------------KYE 233
I A+S L M S +PN ++ L+ F K +
Sbjct: 741 FINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWI 800
Query: 234 DVNKVLQMMER---YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++N V Q++ER +G+ V Y+ I CK + EA LLD ML K + PN Y+
Sbjct: 801 ELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYT 860
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I C F + F M G P Y ++ +C GDY+ A + +
Sbjct: 861 MLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ N K L GL A V +L+ + + +
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCR 958
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 5/221 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + T+ +I +C++ A + + M + K + ++G L+ K+ + ++
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L M G+ V +Y I CK+ A + M +G PN+ TY IYG
Sbjct: 443 KETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+D +A M G++P Y T++ CK +++ A + G P+
Sbjct: 503 LIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPD 562
Query: 356 FTTMKSLVTGLAGASKVSEA-----KELIGLVKEKFTKNVD 391
L L + + EA ++ + L K +T VD
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVD 603
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 1/211 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +++ + + + + ++ + P+ ++ ++ + K+ ++ ++
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
GM+ N + C+ +A LL M G + N +Y+ I G +
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA +M G S N +Y ++ +CK G A G E +G VP+ T +++
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
G + ++ +A + L+ E+ N D W
Sbjct: 327 DGYCKSGRMKDALGIKALM-EQNGCNPDDWT 356
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 16/327 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG-------QANMTEH 128
++SI I L + ++ L E+ + H +++ YG + +
Sbjct: 88 FSYSILIAGLCRGQKVDEAAELLNEMI-------DGGHQPNVVTYGSLLSGLCKMGKLKE 140
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F M +N L+ + D E R+F E + G P + TYN ++
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSLL 199
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F + S+ +M R+ PN +F L+ GF K + +++ M G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I +C K EA+ LL EM+ G+ P+ V+Y+ I G+ K G + A K
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + SGL P++ Y T++ +C+ G A K+ IA G P+ + LV GL
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWN 394
+++E+ EL +VK + + +N
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYN 406
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+YN +++ +S Y +M PN ++G L+ + +++E+ V + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G V Y++ I LC+ +K EA LL+EM+ G +PN VTY + G CK G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA + M G P+ VY ++ K GD A +E + KG +P T SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 363 VTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++G + + + L ++++ N+ T+N + G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 2/274 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ +H T+ +M + + LL +L A+ ++E + VF G P++
Sbjct: 29 KSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM-AAQGCSPNV 87
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y+ +I C A +L EM +PN ++G+L++G K K ++ +
Sbjct: 88 FSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSR 147
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G +YNV I K EA L +EML KG P TY+ + GF + G
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGE 207
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
F + ++ M G PN + ++ CK GD A E + G P+ + +
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
L+ G+ K EA+ L+ +++ ++ ++N
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYN 301
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA E A F+ M +V +++ L+ L + E + E G +P++
Sbjct: 64 QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG-GHQPNV 122
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY ++ C+ A + + M + P+ + L+ GF K+ + ++ +
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V YN + + + ++L +ML +G PN T+++ + GFCK G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + + M + G P+ Y T++ MC G A +E I G P+ +
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 362 LVTGLAGASKVSEAKEL 378
L+ G + + + A +L
Sbjct: 303 LIDGYSKSGALDHAIKL 319
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FK+M ++ FN LL D E R+F+E ++ G PD+ +YN +I+ C
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLIRGMC 273
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A +L EM R + P+ S+ L+ G+ K + K+ + + G++
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ I LC+ K A + +M++ G P++ + G C+ E+ + ++ M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
P Y ++Y +CK + E +G+ P+ K ++ L
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
G YN + L K +C ++ML+ G PN+ TY + + C+ FEEA+ +
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
R M+ G SPN Y ++ +C+G + A E I G PN T SL++GL
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 370 SKVSEAKEL 378
K+ EA +L
Sbjct: 136 GKLKEAVDL 144
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+++Y++ + K G + Y M +G PN+ Y ++ +C+ +E A
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ A+G PN + L+ GL KV EA EL+ ++ NV T+ + +GL
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 9/325 (2%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
+K+++ + PE++ ++ IN + F+G+ + L+ +K + N+ +
Sbjct: 225 KKLIKEFSGKGIKPEAY----TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTL 280
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
I L + + F EM E + + + +L+ + K +KR F+ F +
Sbjct: 281 LIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLI-SWNCRKG--NIKRAFLLFDELT 337
Query: 176 --GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
G+ P TY +I C+ + +A ++ EM K + F L+ G+ ++ +
Sbjct: 338 EKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMID 397
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ + + +ME+ G ++ V N +L++ EAK L M+ G++ ++V+Y++ I
Sbjct: 398 EASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLI 457
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+CK+GN EEAK+ + MS+ + PN+ Y M+Y CK G + A A G
Sbjct: 458 DVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMD 517
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL 378
P+ T SL+ G A V EA L
Sbjct: 518 PDSYTYTSLIHGECIADNVDEAMRL 542
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 8/291 (2%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
E+F +Y M E +R F M + L S+ + ++ L AK + + + +
Sbjct: 135 EKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGL--SIDERSCIVF-LVAAKKRRRID-LCL 190
Query: 170 EFPKTY---GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
EF + G+K + + V++ C + + ++ E K IKP A ++ ++ +
Sbjct: 191 EFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAY 250
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K + V K+L++M++ G+ Y + I K K + + L DEM +G++ +
Sbjct: 251 LKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDI 310
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
Y+ I C+ GN + A + ++ GL P+S Y ++ +CK G+ A E
Sbjct: 311 HVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNE 370
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
+KG +L+ G + EA + ++++K F +V T N I
Sbjct: 371 MQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTI 421
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 40/250 (16%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M + A + M++ + V N + K Y E K+ + G++
Sbjct: 390 YCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG-GVRL 448
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+Y +I +C+ + A + EM K ++PNA +
Sbjct: 449 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAIT--------------------- 487
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
YNV I++ CK K EA+ L M + GM P+S TY+ I+G C
Sbjct: 488 --------------YNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIA 533
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N +EA + + M GL NS Y M+ + K G + A G E KG +T
Sbjct: 534 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKG----YTID 589
Query: 360 KSLVTGLAGA 369
+ T L G+
Sbjct: 590 NKVYTALIGS 599
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ + I +Y + E A R F EM +++ + +N ++ A KE ++++
Sbjct: 453 YTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANM- 511
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ PD TY +I C + + A + +EM K + N+ ++ +++G K K
Sbjct: 512 KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 571
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++ + ++R G +Y I S+
Sbjct: 572 DEAFGLYDEIKRKGYTIDNKVYTALIGSM 600
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 6/290 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L+E RP ++ F S + +G+ ++ + ++ M E ++ V L
Sbjct: 217 LKEAGYRPYVETWNFAFQSCLKFGRTDLI---WKLYEGMMETGVQKDVDIETVGYLIQAF 273
Query: 158 AKDYKEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
D K V R + ++ G+ P D +N++I FC+ + ++ M K+ P+
Sbjct: 274 CNDNK-VSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPD 332
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ ++ GF K +V ++ G + MY IH CK+ + +A L
Sbjct: 333 IFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF 392
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM+ KG PN +Y+ IYGFCK GN +EA K Y+ M +SG + T++ +C G
Sbjct: 393 EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHG 452
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ A F +E K V + T +L+ G KV ++ +L+ ++ K
Sbjct: 453 RTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK 502
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 7/258 (2%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK---PD 180
N A ++ E L AFN L+ K++ V +E T +K PD
Sbjct: 277 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRV----LELVHTMIVKNRNPD 332
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY +I FC++ + A+ + + + P+ + L+ GF K + ED +K+
Sbjct: 333 IFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF 392
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G YN I+ CK+ EA L +ML G K +++ + I G C G
Sbjct: 393 EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHG 452
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA F+R M + + Y T++ C+ G + KE AKG P+ ++
Sbjct: 453 RTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYA 512
Query: 361 SLVTGLAGASKVSEAKEL 378
L+ L V EAKE+
Sbjct: 513 HLIQKLCQLGSVQEAKEM 530
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G PD+ Y +I FC+ A + EM K PN S+ L+ GF K
Sbjct: 360 KDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNL 419
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ K+ + M G K N I LC + EA EM K + + +TY+
Sbjct: 420 DEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTL 479
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFC++G ++ + + GL P++S Y ++ +C+ G + A + +G
Sbjct: 480 IQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGL 539
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGLPQ 402
P T +++GL V E E LI ++K +T+ ++ L Q
Sbjct: 540 QPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQ 590
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ H GQ E A + + EM + + ++N L+ + E
Sbjct: 366 PDMVMYTTLIHGFCKMGQL---EDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEA 422
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+++ + + G K + N +I C + AY EM K+I + ++ L+
Sbjct: 423 MKLYKKMLDS-GYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQ 481
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
GF +E K +L+ ++ G++ S Y I LC+L EAK + ++M ++G++P
Sbjct: 482 GFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQP 541
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
T H I G C+ G E ++ M S L P ++ ++ + + G
Sbjct: 542 MVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 592
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ A++ F+ +HK +L L K +K V + E + G
Sbjct: 76 YLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEILEC-GYPA 134
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
L +N V+ FC+ + A S+ + + ++P+ SF L+ G+ + ++ ++
Sbjct: 135 SLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 194
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G++ V Y+V I+ LCK K EA L +EML +G+ PN VT++ I CK+
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKN 254
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + A + Y+ M + G SP+ Y T++Y +CK GD + E G P+ T
Sbjct: 255 GMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITY 314
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+L+ G + A E ++KE + + + +GL Q
Sbjct: 315 TTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQ 358
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN ++ + + + VF K +G++P + ++N ++ +
Sbjct: 124 YKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITK-WGLRPSVVSFNTLMNGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGV 251
D + + + M ++P+ ++ L+ G KE K ++ N++ +M++R + +GV
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGV 242
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ + I CK A + +MLS+G P+ +TY+ IYG CK G+ ++ +
Sbjct: 243 T-FTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDE 301
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS +GL P+ Y T++ CK GD ETA F K I + + +LV+GL +
Sbjct: 302 MSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGR 361
Query: 372 VSEAKEL 378
+A+++
Sbjct: 362 ADDAEKM 368
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM + + PN +F L+ K + ++ + M G
Sbjct: 214 NGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK + +AL+DEM G+KP+ +TY+ I G CK+G+ E A +F
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEF 333
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + ++ Y +V +C+ G + A +E ++ G P+ T ++
Sbjct: 334 RKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCK 393
Query: 369 ASKVSEAKELI 379
V A L+
Sbjct: 394 KGDVRTASRLL 404
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S+ IN L + + + ++ E+ R + N I ++ + M + A+ +
Sbjct: 205 DVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIY 264
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K+M + +N L+ L D K+V R I+ G+KPD TY +I C+
Sbjct: 265 KQMLSQGFSPDLITYNTLIYGLCKKGDLKQV-RALIDEMSMNGLKPDKITYTTLIDGCCK 323
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D +A+ M ++SI+ + ++ ALV+G +E + +D K+ + M G+K
Sbjct: 324 EGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGT 383
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
Y + I+ CK A LL EM G P VT
Sbjct: 384 YTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 5/270 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ +MT+ A + +M ++ +V ++ ++ L E +R+FI +T G++P+L
Sbjct: 173 EGDMTK-AWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKET-GVQPNL 230
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ + C+ + ++ E+ + + PNA L+ GF+ + DV
Sbjct: 231 YTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLE 290
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M RYG+ V +YN I + EA + +M G+ P+ T S + G C G
Sbjct: 291 MHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQ 350
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+ A +F +M SG++ N++ Y ++ CK G+ AL C G PN T S
Sbjct: 351 VQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSS 410
Query: 362 LVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
L+ G + K+ A +G+ E K V+
Sbjct: 411 LIDGHSKKRKMEIA---MGIYMEMVAKGVE 437
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ + L + L+ +A +VK F+E + YGI P + YN +I
Sbjct: 253 YQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHR-YGIAPTVPVYNSLIDGAF 311
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S + A ++ +M R + P+ + +V G + + + L++M++ G+ +
Sbjct: 312 RSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAA 371
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I CK AEA A M G++PN VTYS I G K E A Y M
Sbjct: 372 AYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEM 431
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ PN Y M++ K GD + A KE KG N T+ LV GL S+V
Sbjct: 432 VAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRV 491
Query: 373 SEAKELI 379
+A I
Sbjct: 492 QDAVMFI 498
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 4/268 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+I Q + + A+ F + ++ A NA+L L A+ + V ++F E + G
Sbjct: 100 VIALSQMGLHDDALSVFCRLPTLP---ALPACNAILDGLVKARRFDRVWKLFDEM-LSRG 155
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P L TYN ++ A D + A+ + +M + I PN ++ ++ +E +
Sbjct: 156 MVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAE 215
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ MM+ G++ + YN + S CK L E+L G+ PN+V + I GF
Sbjct: 216 RLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGF 275
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
+ K + M G++P VY +++ + G + AL ++ G P+
Sbjct: 276 FLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDE 335
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
T +V GL +V A + L+++
Sbjct: 336 FTCSIIVRGLCCGGQVQVATRFLELMQQ 363
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
AN F EM + + +V +N+L+ + +E V+ + + G+ PD
Sbjct: 278 ANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRV-GLCPDEF 336
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T + +++ C A L M + I NA+++ AL+ K+ + M
Sbjct: 337 TCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRM 396
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G++ V Y+ I K RK A + EM++KG++PN +TY+ I+G K G+
Sbjct: 397 NEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDL 456
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
+ A + ++ M+ G+S N+ +V +C+ + A+ F
Sbjct: 457 DAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMF 497
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N+ E A+ T M+E + +V +++L+ + + + +++E G++P++
Sbjct: 384 GNLAE-ALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAK-GVEPNVL 441
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I + D +A+ + EM K I NA + LV G +E + +D V+ +M
Sbjct: 442 TYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQD--AVMFIM 499
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G K I+S C E ++L NSVTY IYG DG +
Sbjct: 500 KYAGQKKPGD-----INSFCSNYTTEEDCSIL----------NSVTYMTLIYGLYIDGQY 544
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
EA KF+ M S + P+S Y ++ C G A+ + + G P
Sbjct: 545 HEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKP 596
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+V F+E + GI + YN +I C+ + + A + M+ I+PN ++ +L
Sbjct: 352 QVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSL 411
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G K+ K E + M G++ V Y IH K A L EM KG+
Sbjct: 412 IDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGI 471
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP--------------------NSS 322
N++T S + G C++ ++A F IM +G NS
Sbjct: 472 SSNAITVSVLVDGLCRESRVQDAVMF--IMKYAGQKKPGDINSFCSNYTTEEDCSILNSV 529
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
Y T++Y + G Y A F VP+ T L+ G
Sbjct: 530 TYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRG 572
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 110 ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
+RF I YG+A + + +V+ F+ M + V FN++LL L K V+
Sbjct: 155 DRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYD 214
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E KTYG+KPD TYN +I+ FC++S + EM P+ ++ LV G +
Sbjct: 215 EMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRA 274
Query: 230 EKYEDVNKVLQMMER--YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + + ++ M + + V Y I C+ ++ EA +L+EM +G+KPN V
Sbjct: 275 GKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIV 334
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS-PNSSVYFTMVYFMCKGGDYETAL 341
TY+ I G C+ +++ K+ M G S P++ + T++ C G+ + A
Sbjct: 335 TYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAF 389
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 49/316 (15%)
Query: 89 NYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
N NG+S+ ++L PD+ + I Y + + A+ +EM+ L+ ++ +
Sbjct: 282 NLVNGMSKKCKDLS--PDVVT---YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTY 336
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N L+ L A+ + ++K + + G PD T+N +I + C + + A+ + M
Sbjct: 337 NTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMK 396
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ + +++S Y+V I +LC+
Sbjct: 397 KLEVSADSAS-----------------------------------YSVLIRTLCQKGDYG 421
Query: 269 EAKALLDEMLSK-------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+A+ L DE+ K G KP + +Y C++G ++A++ R + G + +
Sbjct: 422 KAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRG-TQDP 480
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIG 380
Y ++ CK G YE G + + ++P+ L+ G K AKE L
Sbjct: 481 LSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEK 540
Query: 381 LVKEKFTKNVDTWNEI 396
++K + TW+ I
Sbjct: 541 MLKSSYKPQTSTWHSI 556
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 77/211 (36%), Gaps = 31/211 (14%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+D Y+ +I F A L +M + S KP S++ +++ ++ + V
Sbjct: 513 PDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGV 572
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY--GF 296
+ MM ++ N+ + C L + +G++ + + IY GF
Sbjct: 573 IVMMLERNIRQ-----NINFSTKC-----------LQLLFDRGLQDKAFKITELIYKNGF 616
Query: 297 C------------KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
C K E K + N+ + + + ++ +CK A C
Sbjct: 617 CVKMDEVVQFLCNKRRALEACKLLLFSLKNNE-NIDIGLCNIVILDLCKLNKASEAFSLC 675
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E + KG + + LV L + EA
Sbjct: 676 YELVDKGLHQDLICLNDLVAALEAGGRTEEA 706
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 4/307 (1%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD+++++I +N L + Q L + D+ ++ I + A R
Sbjct: 113 LDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVV---MYSTIIDSLCKGKFVTDAYRL 169
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EM + +V F+ L+ AL + K+ + K G+KP++ TY ++ +C
Sbjct: 170 YSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK-GVKPNVVTYGAIMDGYC 228
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A +I M ++ ++PN + ++ G K+++ ++ + + M + V
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ I LCKL K + + L+DEM S G + +TY+ ++ CK+ + ++A + +
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ PN Y T++ +CK G E A +E + +G+ T ++ GL
Sbjct: 349 KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLF 408
Query: 373 SEAKELI 379
EA L+
Sbjct: 409 DEALALL 415
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI P++ T++ ++ A C+ A ++LA M +K +KPN ++GA++ G+ +
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +M + G++ V YN+ I+ LCK ++ EA L EM K + P+ VTY+ I G
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + M + G + + Y ++++ +CK + A+ KE +G PN
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ GL ++ +A + ++ E + V T+N + GL
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P++ YN +I C+ A ++ EM K I P+ ++ L+ G K K
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + YN +H+LCK +A L+ E+ +G++PN TY+ I G
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CKDG E+A ++ + G Y M+ +CK G ++ AL +P+
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPD 426
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
+ ++++ L+ + + +L+
Sbjct: 427 AVSYETIIYALSEKGETVKTNKLL 450
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 38/288 (13%)
Query: 148 FNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
FN +L +L Y +F +EF GIKP + T ++ +C + + +SIL
Sbjct: 13 FNHILASLVKINHYPTAISLFRQLEFN---GIKPSIVTLTILMNCYCHTGGITFLFSILT 69
Query: 206 EMDRKSIKPNASSFGALVAGF-YKEEKYE------------------------------- 233
++ + +PN+ +F L+ G + YE
Sbjct: 70 KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
+ +QM+ + + + V MY+ I SLCK + +A L EM++KG+ PN T+S +
Sbjct: 130 ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
CKD ++A +M G+ PN Y ++ C AL + +G
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
PN ++ GL +V EA L + +K +V T+N + GL
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIE 170
++II+ G + + A+ FKEM K+ V +N L+ L + K ++ ++
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLE--LVD 311
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
++ G D+ TYN ++ A C++ A +++ E+ + I+PN ++ L+ G K+
Sbjct: 312 EMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDG 371
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ED + Q + G V YNV I+ LCK EA ALL M P++V+Y
Sbjct: 372 RLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYE 431
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
IY + G + K M GLS
Sbjct: 432 TIIYALSEKGETVKTNKLLCAMIVRGLS 459
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 33/226 (14%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + S P F ++A K Y + + +E G+K + + ++ C
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF---------------YRI 311
++L ++L G +PNS+T++ I G C +G EA F Y I
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 312 MSN-----------------SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
+ N + ++ + +Y T++ +CKG A E IAKG P
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
N T LV L K +A L+ ++ +K K NV T+ I G
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDG 226
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 3/230 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ TY+ +I C++ + A ++ EM K + P+ +++ +V + K ++
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + YN I+ LCK A LL+EM SKG +P+++TY+ + G
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK--ESIAKGWV 353
C+ G EAK+F+ M + G SP+ Y ++ + K G A G K + +
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
P+ T +L+ G K EA +L ++ + + + T+N I GL +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 5/265 (1%)
Query: 115 HSIILYGQANMTEHA--VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+SI+L G + A + ++EM E + V NA++ L AK + +V E
Sbjct: 260 YSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMS 319
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G PD+ TYN ++ C+++ A+ + + M P+ S+ ++ G K K
Sbjct: 320 KI-GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
D + M + V +N+ + LCK K EAK LLD M + P+ VT +
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL 438
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG- 351
++G C+D +EA + ++ M G + + ++ +C+ G AL F K +
Sbjct: 439 MHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDG 498
Query: 352 -WVPNFTTMKSLVTGLAGASKVSEA 375
+ P+ T +LV L A +V +A
Sbjct: 499 EFSPDVVTYTTLVNALIEAGRVDQA 523
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A++ FK++ +N++LL L + E + +F + + G P+ TY+
Sbjct: 203 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS-GCAPNGATYS 261
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ C + + + EM K P+ A++ K +K +D +KVL+ M +
Sbjct: 262 IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN+ + LCK +A L M+ G P+ V+YS + G CK +A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + M L P+ + ++ +CK G + A +P+ T +L+ G
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 366 LAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
L + EA L + EK T +V N + AGL
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 9/316 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ ++ L + Q+ + + +R PD+ ++ LY + + E A
Sbjct: 114 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV--AYNGLLDALYKEGKVAE-AW 170
Query: 131 RTFKEMD--EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
FK MD + K+ + +N L+ + E ++F + G PD TYN ++
Sbjct: 171 GLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK-GYMPDTVTYNSIL 229
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
S+ A + +M PN +++ +++G + ++ + M
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V + N I LCK +K +A +L+EM G P+ VTY+ + G CK ++A +
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M ++G +P+ Y ++ +CK A I + VP+ T L+ GL
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409
Query: 369 ASKVSEAKELIGLVKE 384
A K+ EAK+L+ ++ E
Sbjct: 410 AGKLDEAKDLLDVMSE 425
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K +P+ ++ +++G K K + ++++ M G+ V+ Y + + LC+ K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L +M+ +G N+V Y+ I G CKD N E A K M++ G P++ Y T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL---IGLVK 383
++ +C+ G A F ++G+ P+ L+ L KV+EA L + +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 384 EKFTKNVDTWNEIEAG 399
K ++ T+N + G
Sbjct: 181 RKVAPDLITYNTLIDG 196
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 113/285 (39%), Gaps = 48/285 (16%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYG--QANMTEH 128
D L + I+ L +A + + LEE+ PD+ ++I+L G + N+ +
Sbjct: 291 DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVT-----YNILLDGLCKTNLVDK 345
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F M ++ + +++ +L L + RV + + PD+ T+N ++
Sbjct: 346 AHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA-RVLFDRMIERKLVPDVVTFNILM 404
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A +L M ++ P+ + L+ G ++++ ++ ++ Q M G
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464
Query: 249 SGVSMYNVRIHSLCKLRKCAEA-------------------------KALLD-------- 275
+ V +N+ + LC+ K A+A AL++
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAV 524
Query: 276 ----EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+M G P+ V Y+ + G K G +A + + M G
Sbjct: 525 DYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 7/180 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+I ++ L +A + L+ E PD H + + T+ AV
Sbjct: 396 DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC---RDKRTDEAV 452
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIK 189
R F+ M E V N +L L + F K+ G PD+ TY ++
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVN 512
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
A E+ A +M P+ ++ L+ G K+ ++ +++ Q M+ G S
Sbjct: 513 ALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLS 572
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIA----KDYKEVKRVFIEFPKTYGIKPDLDTY 184
A + EM E + +V +FN L+ A ++ E+KR + G PD TY
Sbjct: 222 AAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLENALELKRRM----EKEGCAPDAVTY 277
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ A +L EM + PN ++ L+ G + ++V + M +
Sbjct: 278 NTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNMLIHGHVMLGDNKTASRVREEMVK 337
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G++ + YN I LC+ K E++ LL E+ +G++PN+ T++ I G K N E
Sbjct: 338 NGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSER 397
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + +M SG PN + +V CK D+E A+ K+ + + P+ +
Sbjct: 398 ALQLLNVMKKSGFHPNYDTFKIVVSTFCKNKDFEGAVDVMKDILGRCMAPDKALLHEFFD 457
Query: 365 GLAGASKVSEAKEL 378
GL+ A K+ A++L
Sbjct: 458 GLSKAKKLHLAEDL 471
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 3/275 (1%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
+AN A F+ M H L V + N + A K E+ F + I PD
Sbjct: 144 ARANKLSQATLAFRAMRAHGLLPRVESCNTFISAALRLKR-PEIAVAFFRQMRRCCISPD 202
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK-YEDVNKVL 239
T N ++ AFC + A +L EM + SF L+A + + E+ ++
Sbjct: 203 TYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLENALELK 262
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME+ G YN IH LCK R+ +A LL EM + PN+VTY+ I+G
Sbjct: 263 RRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNMLIHGHVML 322
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ + A + M +GL + Y T++ +C+ G + + +E +G PN +T
Sbjct: 323 GDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTF 382
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTW 393
+L+TG A +L+ ++K+ F N DT+
Sbjct: 383 AALITGHWKTQNSERALQLLNVMKKSGFHPNYDTF 417
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 ITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQ 358
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ + + + + VF K +G++P + ++N ++ + + D + + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N++ M G+ + I CK +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A+ MS GL P+ Y T+
Sbjct: 258 VLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETAL + K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 382 VKE---------KFTKNVDTWN 394
E +F K D W
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWT 399
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M + GL P
Sbjct: 320 GSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G+VP+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 61/265 (23%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKP-DLDTYN 185
H ++++ M H + L+ + +++ K VF E +T G + D+ ++
Sbjct: 11 HTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFS 70
Query: 186 RVIKAFCESS---DSSSAYSILAEMD--------RKSIKPNAS-SFGALVAGFYKEEKYE 233
+I A+ ES D+ Y + E RK ++ + LV GFY+E
Sbjct: 71 GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL-- 128
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
G + + +N+ +HS K + A+++ D + G++P+ V+++ +
Sbjct: 129 ----------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G+ K G+ +E + M SG+ P+ VY
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPD-------VY------------------------ 207
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL 378
T L+ GL SK+ +A EL
Sbjct: 208 ----TYSVLINGLCKESKMDDANEL 228
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 9/295 (3%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALL 152
+ ++E+ +TRPD+ F ++I + N + A R F EM E L + F L+
Sbjct: 297 LKHHMEKSRTRPDV----FTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI 352
Query: 153 LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
+ +K + + + G++PD+ YN ++ FC++ D +A +I+ M R+ +
Sbjct: 353 HGHSRNGQIDLMKESYQKM-LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+P+ ++ L+ GF + + ++ + M++ G++ ++ I +CK + +A+
Sbjct: 412 RPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAER 471
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L EML GMKP+ VTY+ + FCK G+ + K + M + G PN Y ++ +C
Sbjct: 472 ALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLC 531
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTG---LAGASKVSEAKELIGLVKE 384
K G + A + G VP+ T +L+ G A ASK + K IG+V +
Sbjct: 532 KLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEIGIVAD 586
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V FN L+ + + ++VF E K ++P + ++N +I +C+ + + +
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKR-SLRPTVVSFNTLINGYCKVGNLDVGFRL 297
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M++ +P+ ++ AL+ KE K + +++ M G+ ++ IH +
Sbjct: 298 KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSR 357
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ K +MLSKG++P+ V Y+ + GFCK+G+ A+ M GL P+
Sbjct: 358 NGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVT 417
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
Y T++ C+GGD +TAL KE G + +L+ G+ +V +A+
Sbjct: 418 YTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAER 471
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G ++ +N ++ FC+ + A + E+ ++S++P SF L+ G+ K +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ ME+ + V Y+ I++LCK K A L EM +G+ PN V ++ I+G
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHG 354
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
++G + K+ Y+ M + GL P+ +Y T+V CK GD A I +G P+
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ G V A E+
Sbjct: 415 KVTYTTLIDGFCRGGDVDTALEI 437
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
E+L G N ++ + FCK+GN +A+K + ++ L P + T++ CK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289
Query: 336 DYETALGF-CKESIAKGWV-PNFTTMKSLVTGLAGASKVSEAKEL 378
+ + +GF K + K P+ T +L+ L +K+ A L
Sbjct: 290 NLD--VGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRL 332
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 36/292 (12%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV +F M + F+ +L +L K Y V +F +F ++ G+ P+L T N +I
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQF-QSNGVTPNLCTLNILI 135
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNA-------------------------------- 216
FC + + A+S+ A + ++ P+A
Sbjct: 136 NCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQ 195
Query: 217 ---SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
S+G L+ G K + + V ++L+ +E + +K V MY IH LCK ++ +A L
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
EM+ KG+ PN TY+ IYGFC GN +EA M ++P+ + ++ + K
Sbjct: 256 YSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGK 315
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G + A+ +E K PN T SL+ GL + A L +KE+
Sbjct: 316 EGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 367
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
++ L+ L A + K V R+ + + + +KPD+ Y +I C++ A + +E
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKL-EGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSE 258
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K I PN ++ L+ GF ++ +L M+ + V +N+ I +L K K
Sbjct: 259 MIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGK 318
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA +L +EM K M PN VTY+ I G CK+ + E A + M G+ P+ Y
Sbjct: 319 IDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 378
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++ +CKGG E A F + + KG+ N T ++ GL A + +L
Sbjct: 379 LLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A T+ R ++++ H ++ V + ++ L K + ++ E GI P++
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM-IVKGISPNV 268
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I FC + A+S+L EM K+I P+ +F L+ KE K ++ + +
Sbjct: 269 FTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEE 328
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ M + Y I LCK A AL +M +G++P+ +Y+ + CK G
Sbjct: 329 MKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 388
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E AK+F++ + G N Y M+ +CK G + + + KG +P+ T K+
Sbjct: 389 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKT 448
Query: 362 LVTGL 366
++ L
Sbjct: 449 IICAL 453
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 7/285 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEH 128
LD++++ IN L +A +++ L +L+ +PD+ H + +
Sbjct: 195 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLC---KNKRVGD 251
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + EM + +V +N L+ I + KE + E K I PD+ T+N +I
Sbjct: 252 ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM-KLKNINPDVYTFNILI 310
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A + A S+ EM K++ PN ++ +L+ G K E + + M+ G++
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y + + +LCK + AK +L KG N TY+ I G CK G F +
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
M G P++ + T++ + + + + A F +E IA+G +
Sbjct: 431 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 163 EVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
E+KR K G + D +Y +I C++ ++ + +L +++ S+KP+ +
Sbjct: 178 EIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYT 237
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ K ++ D + M G+ V YN I+ C + EA +LL+EM K
Sbjct: 238 TIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLK 297
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ P+ T++ I K+G +EA + M + + PN Y +++ +CK E A
Sbjct: 298 NINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERA 357
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+ CK+ +G P+ + L+ L ++ AK+ L+ + + NV T+N + G
Sbjct: 358 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING 417
Query: 400 L 400
L
Sbjct: 418 L 418
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P F +++ K + Y V + + + G+ + N+ I+ C L A ++
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+L +G P+++T + I G C G + A F+ + G + Y T++ +CK
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
G+ + ++ P+ +++ L +V +A +L ++ + + NV T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270
Query: 393 WNEIEAGL 400
+N + G
Sbjct: 271 YNTLIYGF 278
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 6/290 (2%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
L+E RP ++ F S + +G+ ++ + ++ M E ++ V L
Sbjct: 181 LKEAGYRPYVETWNFAFQSCLKFGRTDLI---WKLYEGMMETGVQKDVDIETVGYLIQAF 237
Query: 158 AKDYKEVKRVFIEFPKTY--GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
D K V R + ++ G+ P D +N++I FC+ + ++ M K+ P+
Sbjct: 238 CNDNK-VSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPD 296
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ ++ GF K +V ++ G + MY IH CK+ + +A L
Sbjct: 297 IFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF 356
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
EM+ KG PN +Y+ IYGFCK GN +EA K Y+ M +SG + T++ +C G
Sbjct: 357 EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHG 416
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ A F +E K V + T +L+ G KV ++ +L+ ++ K
Sbjct: 417 RTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK 466
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 7/258 (2%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIK---PD 180
N A ++ E L AFN L+ K++ V +E T +K PD
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRV----LELVHTMIVKNRNPD 296
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TY +I FC++ + A+ + + + P+ + L+ GF K + ED +K+
Sbjct: 297 IFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF 356
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G YN I+ CK+ EA L +ML G K +++ + I G C G
Sbjct: 357 EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHG 416
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA F+R M + + Y T++ C+ G + KE AKG P+ ++
Sbjct: 417 RTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYA 476
Query: 361 SLVTGLAGASKVSEAKEL 378
L+ L V EAKE+
Sbjct: 477 HLIQKLCQLGSVQEAKEM 494
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G PD+ Y +I FC+ A + EM K PN S+ L+ GF K
Sbjct: 324 KDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNL 383
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ K+ + M G K N I LC + EA EM K + + +TY+
Sbjct: 384 DEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTL 443
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFC++G ++ + + GL P++S Y ++ +C+ G + A + +G
Sbjct: 444 IQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGL 503
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGLPQ 402
P T +++GL V E E LI ++K +T+ ++ L Q
Sbjct: 504 QPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQ 554
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ H GQ E A + + EM + + ++N L+ + E
Sbjct: 330 PDMVMYTTLIHGFCKMGQL---EDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEA 386
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+++ + + G K + N +I C + AY EM K+I + ++ L+
Sbjct: 387 MKLYKKMLDS-GYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQ 445
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
GF +E K +L+ ++ G++ S Y I LC+L EAK + ++M ++G++P
Sbjct: 446 GFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQP 505
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
T H I G C+ G E ++ M S L P ++ ++ + + G
Sbjct: 506 MVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 556
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 10/326 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + + + L +A+ + +++EE++ NE +++ + + Q + +R F
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251
Query: 134 KEMDEHKLRH-SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+E K A+ L AL A Y + R +E + G+ PD+ TY+ +I F
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKA-GYLDRARKSVEELRQSGVVPDVVTYSMLINTFA 310
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ ++ +L +M R +KP+ ++ L+ KE K++D ++L++ME G V
Sbjct: 311 RAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN + LCK K E + + ML P+ VTYS + G K G + A K + ++
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELI 430
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGF---CKESIAKGWVPNFTTMKSLVTGLAGA 369
+S P+++ Y ++ +C+ G E A G + ++A + + LV L A
Sbjct: 431 KSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICR--ALAGLVAALCDA 488
Query: 370 SKVSEAKELIGLVKE---KFTKNVDT 392
+ A+ ++ + E + TK+ DT
Sbjct: 489 ERTDSARRIVEVASERGHRMTKSGDT 514
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 45/368 (12%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNE---RFHAHSIILYGQANMTEHA 129
+D AF++ KL + F+ + + L +R + E + + G AN
Sbjct: 17 VDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALEL 76
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
VR + L G L A + YK ++++ E I P++ TY ++
Sbjct: 77 VRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEE-----SIVPNVFTYTILLN 131
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C S+ + A + EM R KPN ++G L+ + + ++ +V+ + +
Sbjct: 132 GLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPT 191
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF------------- 296
V + LCK + +A ++EM G++PN VTYS+ ++GF
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251
Query: 297 -----------------------CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
CK G + A+K + SG+ P+ Y ++ +
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDT 392
G ++ +L ++ G P+ T +L+ L K +A L+ L++ + NV T
Sbjct: 312 AGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVT 371
Query: 393 WNEIEAGL 400
+N + GL
Sbjct: 372 YNSVMDGL 379
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 42/243 (17%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHA 129
L+ A+ ++ L +A Y + + +EEL+ PD ++ Y
Sbjct: 262 LEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD----------VVTYSM------L 305
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
+ TF G F+A L +E + G+KPD+ TY+ +I
Sbjct: 306 INTFAR---------AGQFDASL--------------ELLEDMRRNGVKPDVVTYSTLIN 342
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A+ +L M+ PN ++ +++ G K K ++V++V +MM +
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
V Y++ ++ L K A L + + S P++ YS I C+ G EEA Y
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY 462
Query: 310 RIM 312
M
Sbjct: 463 HGM 465
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
AK L ++ G+K +S ++ + F E + + ++++ G+ + Y +V
Sbjct: 3 AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTK 388
+C G AL +E ++ + P ++TGL AS+V +A K L +V+E
Sbjct: 63 GLCGAGMANQALELVRE-LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121
Query: 389 NVDTWNEIEAGL 400
NV T+ + GL
Sbjct: 122 NVFTYTILLNGL 133
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 240 QMMERYGMKSGVSM----YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ER +++GV + + + L + K +E L + S+G+ TY + G
Sbjct: 4 KLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDG 63
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G +A + R +S +P +Y ++ +C+ A ++ + + VPN
Sbjct: 64 LCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T L+ GL ++K A+E+
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREV 145
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A F EM E + +V +N L+ L + E +R+ + G+ P+L +YN +
Sbjct: 274 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTL 332
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I +C + A S+ +M P+ +++ L+AGF + + V +++ ME G+
Sbjct: 333 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 392
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
Y + + +L + +A + M G+ + Y I+G C G+ +EA K
Sbjct: 393 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 452
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
++ + L PN +Y TM+Y CK G AL KE G VPN + S + L
Sbjct: 453 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILC 512
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
K +EA+ L+ +++ ++ WN I
Sbjct: 513 KDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 106 DLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
D ER A +++ Y Q A R M L ++ ++N L+
Sbjct: 280 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI 339
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + +F + K+ G P L TYN +I F E+ +S+ ++ EM+ + + P+ +
Sbjct: 340 GNLDKASSLFNQM-KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 398
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ L+ + + E ++ ME+ G+ + + +Y V IH LC + EA L +
Sbjct: 399 YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD 458
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+KPN V Y+ IYG+CK+G+ A + + M +G+ PN + Y + + +CK +
Sbjct: 459 EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWT 518
Query: 339 TALGFCKESIAKGWVPNFT 357
A K+ I G P+ +
Sbjct: 519 EAEVLLKDMIELGLKPSIS 537
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 16/284 (5%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFP 172
+IL ++N E A R F E + ++ V +F ++ + K ++ + ++
Sbjct: 124 LILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM----- 177
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ P++ Y +I C++ D + +M + N ++ L+ GF+K
Sbjct: 178 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLK 237
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+D ++ + M+ G+ V YN I C K A L DEM +G+ N VTY+
Sbjct: 238 KDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTL 297
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G C++ EA++ M GLSPN Y T++ C G+ + A + + G
Sbjct: 298 IGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ 357
Query: 353 VPNFTTMKSLVTGL------AGASKVSEAKELIGLVKEKFTKNV 390
P+ T L+ G AG + + E GL K T +
Sbjct: 358 SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 401
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 19/329 (5%)
Query: 73 LDRLAFSIAINKLSEANY----FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMT 126
LD +F I I E Y F + Q +EE+ P++ ++ ++ G +
Sbjct: 149 LDVYSFGIMIKGCCEVGYLDKGFEVLGQ-MEEMGLSPNVV-----VYTTLIDGCCKNGDI 202
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALL---LALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
E + F +M E + + + L+ + + KD E+ E K GI P++ T
Sbjct: 203 ERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL----YEKMKLTGIVPNVYT 258
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I C ++A+ + EM + + N ++ L+ G +E + + +++ M+
Sbjct: 259 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 318
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R G+ + YN I C + +A +L ++M S G P+ TY+ I GF + N
Sbjct: 319 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 378
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
R M GLSP+ Y ++ + + + E A G V + L+
Sbjct: 379 GVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 438
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNVDT 392
GL + EA +L + E K D
Sbjct: 439 HGLCVVGDMKEASKLFKSLDEMHLKPNDV 467
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 126/296 (42%), Gaps = 6/296 (2%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLR 142
L ++N+F + E K L ++ I++ G + + +M+E L
Sbjct: 127 LIKSNFFEKAWRVFNETKGNVKLD---VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLS 183
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V + L+ D + K++F + + + + TY +I F +
Sbjct: 184 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL-DVVANQYTYTVLINGFFKMGLKKDGIE 242
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ +M I PN ++ +++ + K + ++ M G+ V YN I LC
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 302
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ R+ EA+ L+ M G+ PN ++Y+ I G+C GN ++A + M +SG SP+ +
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 362
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y ++ + + +E A+G P+ T L+ L + + +A ++
Sbjct: 363 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 418
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P +T+N ++ +S+ A+ + E + ++K + SFG ++ G + +
Sbjct: 112 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKG 170
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL ME G+ V +Y I CK K L +M + N TY+ I G
Sbjct: 171 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 230
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K G ++ + Y M +G+ PN Y +M+ C G A E +G N
Sbjct: 231 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 290
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAG 399
T +L+ GL +V EA+ L+ +K + + N+ ++N + G
Sbjct: 291 VVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 335
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E ++ G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILES-G 119
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 120 YPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 180 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 239
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 240 CKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 299
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 300 ITYTALIDGCCKEGDLDTAFE 320
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E S+ FN L+ +D + + VF K +G++P + +YN ++ +
Sbjct: 112 YKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 170
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 231 TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 290
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y ++ CK GD +TA K I + + +L++GL +
Sbjct: 291 SMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 350
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 351 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 386
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLI 201
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 202 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLL 261
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ + A +
Sbjct: 262 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEH 321
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 322 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 381
Query: 369 ASKVSEAKELI 379
V + +L+
Sbjct: 382 KGDVWKGSKLL 392
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PDL TYN +I C+ D A+ ++ EM K +KP+ ++ AL+ G KE + +
Sbjct: 262 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEH 321
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M + ++ Y I LC+ + +A+ +L EMLS G+KP++ TY+ I FCK
Sbjct: 322 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 381
Query: 299 DGNFEEAKKFYR 310
G+ + K +
Sbjct: 382 KGDVWKGSKLLK 393
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ + P+ + +S+ IN L + + + ++ +E+ + + N I + +
Sbjct: 187 ASGVQPDVY----TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A+ +K+M L + +N L+ L D K+ + E G+KPD T
Sbjct: 243 GRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDKIT 301
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D +A+ M +++I+ + ++ AL++G +E + D K+L+ M
Sbjct: 302 YTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 361
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
G+K Y + I+ CK + LL E
Sbjct: 362 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A F EM E + +V +N L+ L + E +R+ + G+ P+L +YN +
Sbjct: 287 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTL 345
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I +C + A S+ +M P+ +++ L+AGF + + V +++ ME G+
Sbjct: 346 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 405
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
Y + + +L + +A + M G+ + Y I+G C G+ +EA K
Sbjct: 406 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 465
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
++ + L PN +Y TM+Y CK G AL KE G VPN + S + L
Sbjct: 466 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILC 525
Query: 368 GASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
K +EA+ L+ +++ ++ WN I
Sbjct: 526 KDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 106 DLQNERFHAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
D ER A +++ Y Q A R M L ++ ++N L+
Sbjct: 293 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI 352
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + +F + K+ G P L TYN +I F E+ +S+ ++ EM+ + + P+ +
Sbjct: 353 GNLDKASSLFNQM-KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 411
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ L+ + + E ++ ME+ G+ + + +Y V IH LC + EA L +
Sbjct: 412 YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD 471
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+KPN V Y+ IYG+CK+G+ A + + M +G+ PN + Y + + +CK +
Sbjct: 472 EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWT 531
Query: 339 TALGFCKESIAKGWVPNFT 357
A K+ I G P+ +
Sbjct: 532 EAEVLLKDMIELGLKPSIS 550
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 166/416 (39%), Gaps = 70/416 (16%)
Query: 41 KTRAALTLLKS--ESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
+T+ AL LL +S P K L + ++AL H + + S ++ L +N F+ L
Sbjct: 3 QTQQALILLPKMVKSPPLKALSLFTSSALQGFQHTHQ-SISFILHLLISSNLFSHSQSLL 61
Query: 99 EEL------------------KTRPDLQNERFHA--HSIIL--YGQANMTEHAVRTFKEM 136
+L T+P L + H H I+ + ++ + E A+ F +M
Sbjct: 62 LKLISGQISSSSFTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQM 121
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESS 195
L FN LL+ L + +++ RVF E T G +K D+ ++ +IK CE
Sbjct: 122 IGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE---TKGNVKLDVYSFGIMIKGCCEVG 178
Query: 196 DSSSAYSILAEMDRKSIKPNAS-----------------------------------SFG 220
+ +L +M+ + PN ++
Sbjct: 179 YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 238
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
L+ GF+K +D ++ + M+ G+ V YN I C K A L DEM +
Sbjct: 239 VLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 298
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+ N VTY+ I G C++ EA++ M GLSPN Y T++ C G+ + A
Sbjct: 299 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 358
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGL------AGASKVSEAKELIGLVKEKFTKNV 390
+ + G P+ T L+ G AG + + E GL K T +
Sbjct: 359 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 414
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 19/329 (5%)
Query: 73 LDRLAFSIAINKLSEANY----FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMT 126
LD +F I I E Y F + Q +EE+ P++ ++ ++ G +
Sbjct: 162 LDVYSFGIMIKGCCEVGYLDKGFEVLGQ-MEEMGLSPNVV-----VYTTLIDGCCKNGDI 215
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALL---LALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
E + F +M E + + + L+ + + KD E+ E K GI P++ T
Sbjct: 216 ERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL----YEKMKLTGIVPNVYT 271
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN +I C ++A+ + EM + + N ++ L+ G +E + + +++ M+
Sbjct: 272 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 331
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R G+ + YN I C + +A +L ++M S G P+ TY+ I GF + N
Sbjct: 332 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 391
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
R M GLSP+ Y ++ + + + E A G V + L+
Sbjct: 392 GVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 451
Query: 364 TGLAGASKVSEAKELIGLVKEKFTKNVDT 392
GL + EA +L + E K D
Sbjct: 452 HGLCVVGDMKEASKLFKSLDEMHLKPNDV 480
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 126/296 (42%), Gaps = 6/296 (2%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLR 142
L ++N+F + E K L ++ I++ G + + +M+E L
Sbjct: 140 LIKSNFFEKAWRVFNETKGNVKLD---VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLS 196
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V + L+ D + K++F + + + + TY +I F +
Sbjct: 197 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL-DVVANQYTYTVLINGFFKMGLKKDGIE 255
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+ +M I PN ++ +++ + K + ++ M G+ V YN I LC
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 315
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ R+ EA+ L+ M G+ PN ++Y+ I G+C GN ++A + M +SG SP+ +
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 375
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y ++ + + +E A+G P+ T L+ L + + +A ++
Sbjct: 376 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 431
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P +T+N ++ +S+ A+ + E + ++K + SFG ++ G + +
Sbjct: 125 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKG 183
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL ME G+ V +Y I CK K L +M + N TY+ I G
Sbjct: 184 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 243
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K G ++ + Y M +G+ PN Y +M+ C G A E +G N
Sbjct: 244 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 303
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAG 399
T +L+ GL +V EA+ L+ +K + + N+ ++N + G
Sbjct: 304 VVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 348
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 2/291 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ-ANMTEHAVRTFKEM 136
+S+ I++L+ F+ + + L + ++ F I +YG AN E A+ T M
Sbjct: 74 YSMMIDRLASCRRFSDVEELLARARAERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAM 133
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ S FN +L L + Y+ V V++ + G+ D +N ++K C+
Sbjct: 134 PGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRL-GVTLDTCCFNILVKGLCQFGK 192
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+L EM ++ PN +++ L+ + + + ++ + M++ + + +YN+
Sbjct: 193 FGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNI 252
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I LC+ ++ EA L M+ KG PNS TY + G G F EAK +M
Sbjct: 253 LIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAER 312
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ P S + ++ +C + A K+ + +G+VP T LVT +
Sbjct: 313 MRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVTSMC 363
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 184 YNRVIKAFCESSD-SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+ R+IK + ++ A L M + P+ +F ++ + +YE V++V
Sbjct: 109 FYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSA 168
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
R G+ +N+ + LC+ K +A +LL EM +G PN TYS + C+ G
Sbjct: 169 SRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQV 228
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A + M + ++ VY ++ +C+ A K + KG PN T + L
Sbjct: 229 DKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVL 288
Query: 363 VTGLAGASKVSEAKELIGLVK 383
+ GL + K EAK L+ +++
Sbjct: 289 LDGLLSSGKFVEAKGLVSMMR 309
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 17/231 (7%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D + N ++K F D S S DR+ KPN + + ++ ++ DV ++
Sbjct: 34 DWLSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEEL 93
Query: 239 L--QMMERYGMKSG-----VSMY-NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
L ER+ + MY NV H +A L M P++ T++
Sbjct: 94 LARARAERFRFSDEFFYRLIKMYGNVANHP-------EKAIETLFAMPGYNCWPSTKTFN 146
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ ++ +E + Y S G++ ++ + +V +C+ G + A+ E +
Sbjct: 147 YVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQ 206
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
G VPN TT +L+ L +V +A EL + KE + +N + AGL
Sbjct: 207 GCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGL 257
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 133/291 (45%), Gaps = 2/291 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ-ANMTEHAVRTFKEM 136
+S+ I++L+ F+ + + L + ++ F I +YG AN + A+ T M
Sbjct: 74 YSLMIDRLASCRRFSDVEEVLARARAESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAM 133
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ S FN +L L + Y+ V V++ + G+ D +N ++K C+
Sbjct: 134 PGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRL-GVTLDTCCFNILVKGLCQFGK 192
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+L EM ++ PN +++ L+ + + + ++ + M++ + + +YN+
Sbjct: 193 FDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNI 252
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I LC+ ++ EA L M+ KG PNS TY + G G F EAK +M
Sbjct: 253 LISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAER 312
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ P S + ++ +C + A K+ + +G+VP T LVT +
Sbjct: 313 MRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVTSMC 363
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 184 YNRVIKAFCESSD-SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+ R+IK + ++ A L M + P+ +F ++ + +YE V++V
Sbjct: 109 FYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSA 168
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
R G+ +N+ + LC+ K +A +LL EM +G PN TYS + C+ G
Sbjct: 169 SRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQV 228
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A + M ++ ++ VY ++ +C+ A K + KG PN T + L
Sbjct: 229 DKAFELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVL 288
Query: 363 VTGLAGASKVSEAKELIGLVK 383
+ GL + K EAK L+ +++
Sbjct: 289 LDGLLSSGKFVEAKGLVSMMR 309
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 38/259 (14%)
Query: 180 DLDTYNRVIKAFCESSDSSSAY-SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D + N ++K F D S S DR+ KPN + + ++ ++ DV +V
Sbjct: 34 DWLSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEV 93
Query: 239 LQ------------------------------------MMERYGMKSGVSMYNVRIHSLC 262
L M Y +N +H L
Sbjct: 94 LARARAESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLV 153
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
R+ + G+ ++ ++ + G C+ G F++A M G PN +
Sbjct: 154 CKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVT 213
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GL 381
Y T++ F+C+ G + A C+ + + L++GL +V+EA L +
Sbjct: 214 TYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSM 273
Query: 382 VKEKFTKNVDTWNEIEAGL 400
V + N T+ + GL
Sbjct: 274 VPKGCYPNSGTYQVLLDGL 292
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E + F +M + + S+ F+ +L + +K+Y V +F + GI DL +YN
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLF-HHMEVCGIGHDLYSYNI 109
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
VI C S A S++ +M + +P+ + +L+ GF + + D ++ ME G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +YN I CK+ +A L D M G++ ++VTY+ + G C G + +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ R M + PN + ++ K G + A+ +E + P+ T SL+ GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 367 AGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
+V EAK+++ L V + +V T+N + G
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N A+ +M+E R V +N ++ + +F + G++
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRA 207
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++ C S S A ++ +M + I PN +F A++ F KE K+ + K+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + V YN I+ LC + EAK +LD M++KG P+ VTY+ I GFCK
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+E K +R M+ GL ++ Y T++ + G + A ++ PN T
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 384
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ GL +V +A L + K + ++ T+N + G+
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 7/282 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ + F M+ + H + ++N ++ L + V + K +G +PD+ T +
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK-FGYEPDVVTVSS 144
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ + A ++++M+ +P+ + ++ G K D ++ MER G
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+++ YN + LC + ++A L+ +M+ + + PN +T++ I F K+G F EA
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K Y M+ + P+ Y +++ +C G + A + KG +P+ T +L+ G
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 367 AGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGLPQ 402
+ +V E +L GLV + T N +AG P
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 43/331 (12%)
Query: 74 DRLAFSIAINKLSEAN-YFNGISQY--LEELKTRPDLQNERFHAHSIILYG--QANMTEH 128
D + S IN + N F+ I +EE+ RPD+ ++ I+ G + +
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV-----IYNTIIDGSCKIGLVND 192
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F M+ +R +N+L+ L + + + R+ + I P++ T+ VI
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAVI 251
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F + S A + EM R+ + P+ ++ +L+ G + ++ ++L +M G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM-------------------------- 282
V YN I+ CK ++ E L EM +G+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 283 ------KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+PN TYS +YG C + E+A + M S + + + Y +++ MCK G+
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
E A + KG P+ + ++++G
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 125/265 (47%), Gaps = 4/265 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ + L + ++ ++ + ++ R + N I ++ + A++ +
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + V +N+L+ L + E K++ ++ T G PD+ TYN +I FC+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM-LDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + EM ++ + + ++ ++ G+++ + + ++ M+ + +
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRT 383
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y++ ++ LC + +A L + M ++ + TY+ I+G CK GN E+A +R +S
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYE 338
GL P+ Y TM+ C+ ++
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWD 468
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ I+ + F+ + EE+ R PD+ + + ++G+ + A +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV---DEAKQM 301
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M V +N L+ +K E ++F E + G+ D TYN +I+ +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYF 360
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ +A I + MD + PN ++ L+ G + E + + M++ ++ ++
Sbjct: 361 QAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ IH +CK+ +A L + KG+KP+ V+Y+ I GFC+ ++++ YR M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 313 SNSGLSP 319
GL P
Sbjct: 478 QEDGLLP 484
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + + V + A++ A A + + +V E G++P+ TY +IK FC
Sbjct: 224 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGN-GVEPNERTYGVLIKGFC 282
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +A +LA+M + + N F ++ G+ ++ +D K+ ME+ G++ +
Sbjct: 283 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIY 342
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN LC++ G+ PN VTY+ I CKDG+ EA++ +R M
Sbjct: 343 TYNTLACGLCRM----------------GVVPNYVTYTTLISIHCKDGDMVEARRLFREM 386
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G +P+ Y M++ K G A F KE KG+VP+ T SLV G KV
Sbjct: 387 AEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 446
Query: 373 SEAKELIGLVKEKFTK-NVDTWNEIEAGLPQ 402
A +L +K++ T+ NV + + +GL +
Sbjct: 447 DVALKLFEEMKQRGTEPNVVAYTALISGLAK 477
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
V+ C+S A +L +M R + NA + +L+ + +++ V ++L++ME G
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 196
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+++ V Y + + SL R ++ +AL +EM + + + Y+ I +C+ GN A
Sbjct: 197 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 256
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG- 365
K +G+ PN Y ++ CK G E A + +G N +++ G
Sbjct: 257 KVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 316
Query: 366 -----LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
+ A K+ A E IG+ N+ T+N + GL
Sbjct: 317 CRKGMVDDALKIKAAMEKIGV-----ELNIYTYNTLACGL 351
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 23/229 (10%)
Query: 106 DLQNERFHAHSIIL------YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
D+Q + + II Y + M + A++ M++ + ++ +N L L
Sbjct: 296 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLC--- 352
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
G+ P+ TY +I C+ D A + EM K P+ ++
Sbjct: 353 --------------RMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTY 398
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
++ G+ K+ + + + + ME+ G V Y +H C K A L +EM
Sbjct: 399 SVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ 458
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+G +PN V Y+ I G K+G E A + Y M +GL P+ S+Y +V
Sbjct: 459 RGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 144 SVGAFNALLLALTIAKDYK--EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
SV F A ++ + K + + +R+ + P+ +G+ + YN ++ + D
Sbjct: 128 SVSPFAASVVVDGLCKSGRVDDARRLLDDMPR-HGVSLNALCYNSLLDCYVRQKDDGRVQ 186
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
IL M+ + I+ ++ LV V + M+ + V +Y I++
Sbjct: 187 EILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAY 246
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
C+ A +LDE + G++PN TY I GFCK G E A+ M G+ N
Sbjct: 247 CRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQ 306
Query: 322 SVYFTMVYFMCKGGDYETAL-----------------------GFCKESIAKGWVPNFTT 358
++ TM+ C+ G + AL G C+ G VPN+ T
Sbjct: 307 IIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCR----MGVVPNYVT 362
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+L++ + EA+ L + EK T +V T++
Sbjct: 363 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYS 399
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 118/308 (38%), Gaps = 20/308 (6%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++I ++ LS A + + E+K + + + I Y +A A + E
Sbjct: 204 YTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECV 263
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + + + L+ + + + + + G+ + +N +I +C
Sbjct: 264 GNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADM-QGQGVGLNQIIFNTMIDGYCRKGMV 322
Query: 198 SSAYSILAEMD-------------------RKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
A I A M+ R + PN ++ L++ K+ + ++
Sbjct: 323 DDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRL 382
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G V Y+V IH K + EA+ EM KG P+ TY+ ++G C
Sbjct: 383 FREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCV 442
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G + A K + M G PN Y ++ + K G E A + + G +P+ +
Sbjct: 443 NGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSL 502
Query: 359 MKSLVTGL 366
+LV L
Sbjct: 503 YSALVGSL 510
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 19/342 (5%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQ---------YLEELK---TRPDLQNERFHAHSIIL 119
H LA +N++S A NG+ + +L ++ T+PD+ ++
Sbjct: 152 HDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCK 211
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIK 178
Y + A F EM + V +N L+ I KE + E KT I
Sbjct: 212 Y---QLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT--IN 266
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN ++ A C+ A S+LA M + +KP+ ++ L+ G++ + + V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M G+ V Y + I+ CK + EA L EM K M P VTYS I G CK
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G M + G + Y +++ +CK G + A+ + + PN T
Sbjct: 387 SGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 359 MKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
L+ GL ++ +A+E+ L+ + + NV T+N + G
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 7/267 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ EM + +V +N L+ AL KE K V K +KPD+ TY+
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYST 309
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ + + A + M + P+ ++ L+ GF K + ++ + + M +
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M G+ Y+ I LCK + + L+DEM +G + +TYS I G CK+G+ + A
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + + PN + ++ +CKGG + A ++ + KG+ N T ++ G
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489
Query: 367 AGASKVSEAKELI------GLVKEKFT 387
+ EA ++ G + FT
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFT 516
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY +I FC++ A ++ EM +K++ P ++ +L+ G K + V
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + V Y+ I LCK A AL ++M + ++PN T++ + G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A++ ++ + G N Y M+ CK G E AL + G +PN
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T ++++ L + +A++L+
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLL 537
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T N +I FC + +S+LA++ ++ P+ + L+ G + + V
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQ---V 145
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
K L ++ G + Y I+ +CK+ A L ++ + KP+ V Y+
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTI 205
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK EA + M+ G+S + Y T++Y C G + A+G E + K
Sbjct: 206 IDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTI 265
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
PN T LV L KV EAK ++ ++ + K +V T++ + G
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 7/220 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + +N+++ +F + S+A S+ ++ K I+P+ + L+ F + V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L + + G N I LC + +A D++L++G + N V+Y+ I G CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ A KF R + P+ +Y T++ MCK A G E KG + T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK----NVDTWN 394
+L+ G K+ EA IGL+ E K NV T+N
Sbjct: 237 YNTLIYGFCIVGKLKEA---IGLLNEMVLKTINPNVYTYN 273
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
FN +S + PD+ H ++I++ G + M + A+ FKEM + + + +
Sbjct: 327 FNAMSL----MGVTPDV-----HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
++L+ L + V + E + G D+ TY+ +I C++ A ++ +M
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEM-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ I+PN +F L+ G K + +D +V Q + G V YNV I+ CK
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
EA +L +M G PN+ T+ I K ++A+K R M GL
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + TY+ +I C+S S + ++ EM + + ++ +L+ G K + +
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M+ ++ + + + + LCK + +A+ + ++L+KG N TY+ I G CK
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G EEA M ++G PN+ + T++ + K + + A ++ IA+G +
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P F ++ F K + Y + +E G++ + N+ I+ C + + ++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L ++L +G P++VT + I G C G ++A F+ + G N Y T++ +CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
GD A+ F ++ + P+ +++ + VSEA L + + + +V T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 393 WNEIEAG 399
+N + G
Sbjct: 237 YNTLIYG 243
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A ++M + + +NA++ + + +KE ++F + + G+ PD
Sbjct: 279 KARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM-TSKGLIPDT 337
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T++ + + C+ S A I M K P+ S+ L+ G+ E ++ D+N +
Sbjct: 338 VTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHS 397
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ S N+ I + K EA + EM +G++PN VTYS I FC+ G
Sbjct: 398 MADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGR 457
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW-VPNFTTMK 360
+A + + M + G+ PN++VY ++++ C GD A F E ++KG PN
Sbjct: 458 LADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFS 517
Query: 361 SLVTGLAGASKVSEAKELIGLV 382
S++ L +V +A+++ LV
Sbjct: 518 SIIHSLCIEGRVMDAQDVFNLV 539
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 2/237 (0%)
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
L L AK E V + PD +YN VIK+ C S S A ++ M ++
Sbjct: 165 FLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE 224
Query: 211 S--IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
P+ SF ++ GF+K+ + + M + G+ V YN + +LCK R
Sbjct: 225 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMD 284
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A+ +L +M+ KG++P+ VTY+ I+G+ G+++E+ K +R M++ GL P++ + + +
Sbjct: 285 KAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM 344
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+CK G + A + KG +P+ + L+ G A + ++ L + +K
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 100/202 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN ++ A C++ A +L +M K ++P+ ++ A++ G+ +++
Sbjct: 262 GVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKES 321
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ + M G+ ++ + SLCK + +A+ + M +KG P+ V+YS ++G
Sbjct: 322 AKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHG 381
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ +G F + + M++ G+ N ++ K G + A+ E +G PN
Sbjct: 382 YATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPN 441
Query: 356 FTTMKSLVTGLAGASKVSEAKE 377
T +L++ ++++A E
Sbjct: 442 VVTYSTLISAFCRMGRLADAME 463
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 145/368 (39%), Gaps = 43/368 (11%)
Query: 67 LTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA-- 123
+T + H+ D +++SI ++ + F ++ + + + N H +I++ A
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSN--CHCINILISAHAKR 420
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
M + A+ F EM +R +V ++ L+ A + F + + GI+P+
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQM-ISIGIEPNTAV 479
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSI------------------------------- 212
Y+ +I FC D A ++EM K +
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539
Query: 213 -----KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+P +F +L+ G+ K E VL M G++ V N + CK K
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKI 599
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+ L EML K +KP +VTY+ + G + G AKK + M +SG + + Y +
Sbjct: 600 DDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 659
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-F 386
+ +C+ + A+ + A + T + +++ L + EA +L +
Sbjct: 660 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGL 719
Query: 387 TKNVDTWN 394
NV T+
Sbjct: 720 VPNVSTYG 727
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 1/237 (0%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
R ++ F++++ +L I + + VF G +P + T+N +I +C A+
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVF-NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L M I+P+ + LV+G+ K K +D + + M +K YN+ + L
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+ + + AK + EM+ G + TY + G C++ +EA + + +
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 688
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++ TM+ + K E A G VPN +T ++ L V EA +
Sbjct: 689 TILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTM 745
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + + F+EM K++ + +N +L L A K++F E + G
Sbjct: 593 YCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDS-GTAV 651
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+DTY ++K C + + A ++ ++ K + + ++ YK + E+ N +
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ VS Y V I +L K EA + M G P+S + I +
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 771
Query: 300 GNFEEA 305
G+ +A
Sbjct: 772 GDIVKA 777
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 39/188 (20%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK--------------------------- 283
V Y + + C+ R+ A + +L G+K
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183
Query: 284 ---------PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG--LSPNSSVYFTMVYFMC 332
P++++Y+ I C D +EA + M+ G SP+ + T+++
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVD 391
K G+ A E + KG VP+ T S+V L A + +A+ ++ +V + +
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303
Query: 392 TWNEIEAG 399
T+N I G
Sbjct: 304 TYNAIIHG 311
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ M E A + F M + ++ + NA L L+ A + ++ R F GI P +
Sbjct: 74 ELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGE-GDLSRDFFRDMVGAGIAPTV 132
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN +I C+ D +A S+ +M + + P+ ++ L+ G+ K ++ + +
Sbjct: 133 FTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEE 192
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+ G + V YN I+S CK + A EM K +KPN ++YS I CK+G
Sbjct: 193 MKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGM 252
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+ A KF+ M+ GL PN Y +++ CK G+ A E + + N T +
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTT 312
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
L+ GL ++EA+EL + K T N+ + + G
Sbjct: 313 LLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHG 351
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F++M + L + +N L+ E +F E K G +PD+ TYN +I +FC
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEM-KFMGCEPDVITYNALINSFC 213
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ EM K +KPN S+ L+ KE + K M R G+
Sbjct: 214 KFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF 273
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ I + CK EA L DEML + + N VTY+ + G C++G EA++ +R M
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G++PN Y +++ K + A+ E K P+ ++V GL SK+
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393
Query: 373 SEAKELIGLVKE 384
E K ++ +KE
Sbjct: 394 EECKIIMTEMKE 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 11/324 (3%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQA 123
L L+ + ++ ++ L E N + + P+LQ A++ +++G
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQ-----AYTALIHGHI 353
Query: 124 NM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ + A+ F EM E ++ + + ++ L +E K + E K GI +
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM-KESGIGANP 412
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y ++ A+ ++ + + A ++L EM + +F AL+ G K ++
Sbjct: 413 VIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGR 472
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M + ++ V++Y I LCK +AK L DEM K M P+ + Y+ I G K GN
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGN 532
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
F+EA M G+ + Y ++V+ + + G + A F E I KG +P+ T
Sbjct: 533 FQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTR 592
Query: 362 LVTGLAGASKVSEAKELIGLVKEK 385
L+ + EA EL + EK
Sbjct: 593 LLRKHYELGNIDEAIELQNELVEK 616
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F+EM + L+ +V +++ L+ AL + + F++ + G+ P+ TY+ +I
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRV-GLLPNEFTYSSLI 279
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C++ + A+ + EM ++ + N ++ L+ G +E + ++ + M + G+
Sbjct: 280 DANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVT 339
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y IH K+R +A L +EM K +KP+ + + ++G C + EE K
Sbjct: 340 PNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKII 399
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M SG+ N +Y T++ K G+ A+ +E G T +L+ GL
Sbjct: 400 MTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCK 459
Query: 369 ASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
V EA G + + NV + + GL
Sbjct: 460 RGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGL 492
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 1/290 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++S I+ L + ++ ++ L NE ++ I +A A E
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + ++ + LL L E + +F K G+ P+L Y +I +
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKA-GVTPNLQAYTALIHGHIKVR 356
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM K IKP+ +G +V G E K E+ ++ M+ G+ + +Y
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + K EA LL+EM G + VT+ I G CK G +EA ++ M +
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDH 476
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
L PN +VY ++ +CK A E K +P+ +++ G
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDG 526
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 101/260 (38%), Gaps = 36/260 (13%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P ++ + E +A M + + P A S A + K + +
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G+ V YN+ I +CK A++L ++M G+ P+ VTY+ I G+ K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 299 DG-------NFEEAK----------------------------KFYRIMSNSGLSPNSSV 323
G FEE K +F+R M + L PN
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
Y T++ +CK G + A+ F + G +PN T SL+ A + EA L ++
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299
Query: 383 KEKFTKNVDTWNEIEAGLPQ 402
+E N+ T+ + GL +
Sbjct: 300 QEHVDLNIVTYTTLLDGLCE 319
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 4/204 (1%)
Query: 185 NRVIKAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
N ++K SS S + IL R P F AL + + E +
Sbjct: 29 NNILKELVLSSWVLPGSDVFEILWT-TRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLR 87
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M ++ + N +H L K + ++ +M+ G+ P TY+ I CK+G+
Sbjct: 88 MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A+ + M GL+P+ Y T++ K G + ++ +E G P+ T +
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207
Query: 362 LVTGLAGASKVSEAKELIGLVKEK 385
L+ + A E +K+K
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDK 231
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 143/311 (45%), Gaps = 9/311 (2%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPD--LQNERFHAHSIILYGQAN--MTE 127
HLD++++ IN L + G ++ EL R D L ++ I+ G
Sbjct: 295 HLDQVSYGTLINGLCKV----GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVN 350
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + E ++ V +NAL+ I K+ +F + + I PD+ T++ +
Sbjct: 351 DAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMT-SKNIIPDVYTFSIL 409
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ FC+ + A ++LA M ++SIKP+ ++ +L+ G+ + + M G+
Sbjct: 410 VDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 469
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ V YN+ I+ CK++ EA L EM K + P+ +TYS I G CK G A +
Sbjct: 470 TANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALE 529
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M G P+ Y +++ +CK + A+ + +G P+ T LV GL
Sbjct: 530 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLC 589
Query: 368 GASKVSEAKEL 378
+ K+ +A+++
Sbjct: 590 QSGKLEDARKV 600
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PD+ TYN +I FC A + +M K+I P+ +F LV GF K+ ++
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
VL MM + +K V Y+ + C + + +A+++ + M +G+ N +Y+ I GF
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK +EA K ++ M + + P+ Y +++ +CK G AL E +G P+
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGLPQ 402
T S++ L V +A L+ +K + +++T+ + GL Q
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQ 590
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++PD+ YN +I C+ + A+ + +E K I P+ ++ AL++GF K +D
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M + V +++ + CK EAK +L M+ + +KP+ VTYS + G+
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C +A+ + MS+ G++ N Y M+ CK + A+ KE K P+
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 357 TTMKSLVTGLAGASKVSEAKELI 379
T SL+ GL + ++S A EL+
Sbjct: 509 ITYSSLIDGLCKSGRISYALELV 531
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 21/347 (6%)
Query: 41 KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFN-GISQYLE 99
+T+AAL LL+ N K+++ P D + ++ I+ + + + N Y E
Sbjct: 313 ETKAALELLRR--NDGKLVQ--------P----DVVMYNTIIDGMCKDKHVNDAFDLYSE 358
Query: 100 ELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
++ R PD+ + G+ + A+ F +M + V F+ L+
Sbjct: 359 KVSKRIFPDVFTYNALISGFCIVGKL---KDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ KE K V K IKPD+ TY+ ++ +C ++ + A SI M + + N
Sbjct: 416 DGNIKEAKNVLAMMMKQ-SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S+ ++ GF K + ++ K+ + M + V Y+ I LCK + + A L+DEM
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+G +P+ +TY+ + CK + ++A + G+ P+ + Y +V +C+ G
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKL 594
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
E A ++ + KG+ + ++ G EA L+ ++E
Sbjct: 595 EDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEE 641
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 1/238 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y N A F M + +V ++N ++ K E ++F E I P
Sbjct: 448 YCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK-QIFP 506
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ +I C+S S A ++ EM + +P+ ++ +++ K+ + +L
Sbjct: 507 DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL 566
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
++ G++ ++ Y + + LC+ K +A+ + +++L KG + Y+ I GFC
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDK 626
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
G F+EA M +G P++ Y ++ + + + + A +E I +G + T
Sbjct: 627 GLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT 684
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T IK FC A ++ + S+G L+ G K + +
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ + ++ V MYN I +CK + +A L E +SK + P+ TY+ I G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G ++A + M++ + P+ + +V CK G+ + A + + P+
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
T SL+ G ++V++A+ + + + T NV ++N + G
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
++L G +P+++T + FI GFC G +A F+ + G + Y T++ +CK G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ + AL + + K P+ +++ G+ V++A +L V ++ +V T+N
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 395 EIEAGL 400
+ +G
Sbjct: 373 ALISGF 378
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
L+ V N LL L AK + V + G++PD +Y+ V+K+ CE S S A
Sbjct: 150 LKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRA 209
Query: 201 YSILAEMDRKS--IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
+L M +KS PN S+ ++ GF++E + + M + G+ V Y+ I
Sbjct: 210 LDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYI 269
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+LCK R +A+ +L +M+S G +P+ VTY+ I+G+ G ++E +R M+ GL
Sbjct: 270 DALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLM 329
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ + + +CK G + A F AKG P+ T L+ G A V + L
Sbjct: 330 PDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNL 389
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A ++M + +N ++ +I +KE +F E + G+ PD+
Sbjct: 274 KARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRR-GLMPDI 332
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T N + + C+ S A M K KP+ ++ L+ G+ E D+ +
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME G+ + S+YN+ I + K EA + +M +G+ P++ TY I F + G
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMK 360
+A + M GL P++ VY +++ C G+ A E +++G PN
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512
Query: 361 SLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
S++ L +V EA+++ LV + +V T+N + G
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDG 552
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 99/202 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY+ I A C++ A +L +M +P+ ++ ++ G+ ++++
Sbjct: 257 GVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKET 316
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R G+ + N + SLCK K EA D M +KG KP+ VTYS ++G
Sbjct: 317 AGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHG 376
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ +G + + M +G+ + SVY ++ K G + A+ + +G +P+
Sbjct: 377 YAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPD 436
Query: 356 FTTMKSLVTGLAGASKVSEAKE 377
T +++ + ++++A +
Sbjct: 437 AWTYGTVIAAFSRMGRLADAMD 458
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 142/368 (38%), Gaps = 43/368 (11%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S+ ++ + Y + ++ + + + I YG+ M + A+ F
Sbjct: 366 DLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIF 425
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+M E + + ++ A + + F + G+KPD YN +I+ FC
Sbjct: 426 TQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM-IAMGLKPDTIVYNSLIQGFCM 484
Query: 194 SSDSSSAYSILAEMDRKSI------------------------------------KPNAS 217
+ A +++EM + I +P+
Sbjct: 485 HGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVI 544
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+F +L+ G+ K E VL M G++ V Y+ + C+ + + L EM
Sbjct: 545 TFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREM 604
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
LSKG+KP ++TY ++G DG AKK M SG + + S ++ +C+
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVD 391
+ A+ K+ A N + +++ + K EA EL GLV T V
Sbjct: 665 DEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVM 724
Query: 392 TWNEIEAG 399
N ++ G
Sbjct: 725 ITNLLKEG 732
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 1/237 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN+++ +L E + +F + G +PD+ T+N +I + A+ +L M
Sbjct: 511 FNSIINSLCKEGRVVEAQDIF-DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
I+P+ ++ AL+ G+ + + +D + + M G+K Y + +H L +
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
AK + EM+ G + T + G C++ +EA ++ + + N ++ TM
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+ M K E A A G VPN +T ++T L V EA + L+++
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEK 746
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ GI+PD+ TY+ ++ +C + + EM K +KP ++G ++ G + + +
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 234 DVNKVLQMMERYG-----------------------------------MKSGVSMYNVRI 258
K+ M G +K +++ N I
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMI 690
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
++ K+RK EA L D + + G+ PN+ TY I K+G+ EEA + +M SG +
Sbjct: 691 DAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCA 750
Query: 319 PNSSVYFTMVYFMCKGGDYETA 340
P+S + ++ + + G+ A
Sbjct: 751 PSSRLLNNIIRVLLEKGEISKA 772
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 65/162 (40%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G D+ T ++ C ++ A ++ ++ ++K N + ++ YK K E+
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
N++ + G+ S Y V I +L K EA + M G P+S ++ I
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRV 762
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ G +A + + +S +S M+ + G Y
Sbjct: 763 LLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKY 804
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 39/183 (21%)
Query: 251 VSMYNVRIHSLCK----------------------------LRKC-AEAK-------ALL 274
V YN+ + C+ L KC AK LL
Sbjct: 119 VCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLL 178
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM--SNSGLSPNSSVYFTMVYFMC 332
M G++P++++YS + C+D + A M + G SPN Y T+++
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFF 238
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVD 391
+ G+ A E + +G VP+ T S + L A + +A+ ++ ++ F +
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKV 298
Query: 392 TWN 394
T+N
Sbjct: 299 TYN 301
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 78/195 (40%), Gaps = 3/195 (1%)
Query: 115 HSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ IIL+G N T A + EM E + +L L E +F +
Sbjct: 616 YGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL- 674
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+K ++ N +I A + A + + + PNAS++G ++ KE
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ + + +ME+ G + N I L + + ++A L ++ K + + T S
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLM 794
Query: 293 IYGFCKDGNFEEAKK 307
+ F + G + E K
Sbjct: 795 LSLFSRKGKYREQIK 809
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN-MTEHAVRT 132
D ++++ + L A + + + +EE+ R +++I Y N + E
Sbjct: 226 DVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M EH + + ++ + + + EV + +YG+KP++ YN ++K C
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGIC-KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ +LAEM K + +F LV F + + V ++L+ M G V
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVI 403
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I+ CK EA LL M + G KPN+++Y+ + G C + +A+ M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G N + T++ F+CK G E A+ K+ + G P+ + +++ GL A K
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
EA EL+ +V + + N ++ I + L
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASAL 552
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AVR +++ VG N +L A+ E + + P ++G +PD+ +YN V+
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP-SFGCEPDVVSYNAVL 234
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C + ++ EM R + PN +F L++ + +E V++VL M +G
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 294
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ MY I +CK A +L+ M S G+KPN V Y+ + G C +EE ++
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M + + + +V F C+ G + + ++ + +G +P+ T +++ G
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCK 414
Query: 369 ASKVSEAKELI 379
+ EA L+
Sbjct: 415 EGLIDEAVMLL 425
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 3/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ F+ I+ L F + + L ++ + R +A I + E A
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 322
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE-FPKTYGIKPDLDTYNRVIKAFCES 194
M + L+ +V +N LL L A+ ++E + + E F K + D T+N ++ FC++
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL--DDVTFNILVDFFCQN 380
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+L +M + P+ ++ ++ GF KE ++ +L+ M G K Y
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + LC + +A+ L+ +M+ +G N +T++ I CK G E+A + + M
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+G SP+ Y T++ + K G + AL + KG PN S+ + L+ ++++
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560
Query: 375 AKEL 378
++
Sbjct: 561 VIQM 564
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
V E P+ G P Y+ +++A C SA +L ++ + + + ++
Sbjct: 144 VLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 202
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ ++ +L+ + +G + V YN + LC ++ + L++EM+ PN
Sbjct: 203 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 262
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VT++ I C++G FE + M G +P+ +Y T++ +CK G E A
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 322
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
+ G PN +L+ GL A + E +EL+ E F K+
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA---EMFDKD 362
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 121/282 (42%), Gaps = 1/282 (0%)
Query: 70 ESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA 129
+ LD + F+I ++ + + + + LE++ R + + + I + + + + A
Sbjct: 362 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEA 421
Query: 130 VRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
V K M + + ++ +L L A+ + + + + + + G + T+N +I
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLIN 480
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C+ A +L +M P+ S+ ++ G K K ++ ++L +M GM
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+Y+ +L + + + + D + ++ ++V Y+ I CK G E A +F
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
M +SG PN S Y ++ + G + A E +KG
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 2/327 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ + L + + + + L E+ + +E + Q + + A+
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVV 414
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M EH + ++++L L + + K+YG KPD Y V+K C
Sbjct: 415 DHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCS 473
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A ++AEM P+ +F +VA ++ + +V++ M G +
Sbjct: 474 TEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVT 533
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I LC +A LL ++ S G KP+ VT++ + G C +E+A++ M
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
S P+ + T++ +C+ G A+ K G VPN +T +V L A K
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQ 653
Query: 374 EAKELIGLVKEKFTKNVDTWNEIEAGL 400
A EL+ + T ++ T+N + + L
Sbjct: 654 AALELLSGMTNG-TPDLITYNTVISNL 679
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 2/274 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM + +N L+ A+ D E + P ++G KPD TY V
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLP-SHGCKPDAVTYTPV 362
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+K+ C S +LAEM + P+ +F +V ++ + +V+ M +G
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ + Y+ + LC + + +A LL + S G KP+++ Y+ + G C +E A++
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M S P+ + T+V +C+ G + A+ ++ G P+ T ++ GL
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542
Query: 368 GASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
S + +A EL+ ++ K ++ T+N + GL
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 154/352 (43%), Gaps = 21/352 (5%)
Query: 39 KDKTRAALTLLKSESNPEKI--LEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQ 96
K T A T+LK + E+ E A L + D + F+ + L + + +
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517
Query: 97 YLEELK---TRPDLQNERFHAHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+E++ PD+ ++ I+ G N + A+ ++ + + FN L
Sbjct: 518 VVEQMSENGCSPDIVT-----YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
L L +++ +++ ++ PD T+N VI + C+ + A L M
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRS-NCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS---MYNVRIHSLCKLRKCA 268
PN+S++ +V K K + ++L GM +G YN I +L K K
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLS-----GMTNGTPDLITYNTVISNLTKAGKME 686
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA LL M+S G+ P++ TY YG C++ + A + R + ++GLSP+++ Y ++
Sbjct: 687 EALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVL 746
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
C+ + A+ ++ G +P+ +T L+ LA + EAK L+
Sbjct: 747 LGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +N ++ A ++ +R+ P PD T+N +I+A C A ++
Sbjct: 218 TVVTYNTMVNGYCRAGRIEDARRLINGMP----FPPDTFTFNPLIRALCVRGRIPDALAV 273
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+M + P+ ++ L+ KE Y +L M G + + YNV I+++C
Sbjct: 274 FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCN 333
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
EA +L + S G KP++VTY+ + C ++E ++ M+++ +P+
Sbjct: 334 EGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVT 393
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+ T+V +C+ G + A+ G V + T S++ GL +V +A EL+ +K
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK 453
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 10/282 (3%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHS--VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Q + A+ F M R+ V N L+ L + +RVF G
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL----GPSA 217
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ TYN ++ +C + A ++ M P+ +F L+ + D V
Sbjct: 218 TVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVF 274
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G V Y++ + + CK +A ALLDEM +KG +P+ VTY+ I C +
Sbjct: 275 DDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ +EA + + G P++ Y ++ +C ++ E + P+ T
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++VT L V A E++ + E ++ T++ I GL
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGL 436
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + A+ T K M E+ + ++ ++ AL A + + T G PDL
Sbjct: 613 QKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNG-TPDL 669
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN VI ++ A +L M + P+ +++ +L G +E+ + ++L+
Sbjct: 670 ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
++ G+ + YN + C+ R+ A M+S G P+ TY + G
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGL 789
Query: 302 FEEAKKFYRIMSNSGL 317
+EAK+ + + G+
Sbjct: 790 LDEAKRLLASLCSLGV 805
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L + +K V + E + G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILEC-G 119
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 120 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 180 RLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGH 239
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 240 CKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDK 299
Query: 357 TTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A K +++E + + + +GL Q
Sbjct: 300 FTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQ 346
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 146/336 (43%), Gaps = 29/336 (8%)
Query: 86 SEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT--------- 132
S+ F+G I+ YLE R ++ R H + M EH ++
Sbjct: 52 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGF 111
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 112 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 170
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 230
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + MLS+ + P+ +TY+ IYG CK+G+ ++A M
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD +TA K I + + +L++GL +
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQS 350
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 351 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVW 386
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ G++PD+ TY+ +I
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAN-GVQPDVYTYSVLI 201
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 202 NGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLL 261
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ + A K
Sbjct: 262 PDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKH 321
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 322 RKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCK 381
Query: 369 ASKVSEAKELI 379
V + +L+
Sbjct: 382 KGDVWKGSKLL 392
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN VI C+ + A+ + +EM K I PN ++ AL++GF+ K +D + +
Sbjct: 198 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 257
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+K +N+ + CK RK E K + M+ +G+ P+ VTY+ + G+C
Sbjct: 258 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVN 317
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
AK + M+ G++P+ Y ++ CK + A+ E K +PN T SL+
Sbjct: 318 TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 377
Query: 364 TGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
GL+ + ++S A +L+ + ++ N+ T+N I L
Sbjct: 378 DGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 415
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 9/300 (3%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHA--HSIILYGQAN--MTE 127
HLD++++ I+ L + G ++ +L R D + + +A ++ ++YG
Sbjct: 157 HLDQVSYGTLIHGLCKV----GETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVN 212
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + EM + +V ++AL+ + K+ +F + IKPD T+N +
Sbjct: 213 DAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILE-NIKPDGYTFNIL 271
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ FC+ ++ A M ++ I P+ ++ +L+ G+ ++ + M + G+
Sbjct: 272 VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGV 331
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ YN+ I+ CK++K +A L +EM K + PN VTY+ I G K G A +
Sbjct: 332 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
M + G+ PN Y +++ + K + A+ + +G P+ T L+ GL
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ + +D ++ + +N ++ + K + ++ E + GI P++ TY+
Sbjct: 176 TRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM-VSKGISPNVVTYS 234
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I F A + ++ ++IKP+ +F LV GF K+ K ++ V MM +
Sbjct: 235 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 294
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ V YN + C +++ AK++ + M G+ P+ +Y+ I GFCK ++A
Sbjct: 295 GIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 354
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M + PN Y +++ + K G AL + +G PN T S++
Sbjct: 355 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 414
Query: 366 LAGASKVSEAKELIGLVKEK 385
L +V +A LI K++
Sbjct: 415 LFKTHQVDKAIALITKFKDQ 434
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F M + + V +N+L+ + K+ K +F + G+ PD+ +YN +I F
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG-GVNPDIRSYNILINGF 345
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ A ++ EM K+I PN ++ +L+ G K + +++ M G+ +
Sbjct: 346 CKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 405
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI------------------ 293
YN I +L K + +A AL+ + +G++P+ TY+ I
Sbjct: 406 LTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNV 465
Query: 294 --YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+GFCK G F+EA M +S PN+ Y + + + + A +E I +G
Sbjct: 466 MIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRG 525
Query: 352 WV 353
+
Sbjct: 526 LL 527
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 9/228 (3%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F ++ ++ FN L+ + KE K VF K GI PD+ TYN ++
Sbjct: 249 AIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ-GIIPDVVTYNSLM 307
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C + ++A SI M + + P+ S+ L+ GF K +K + + M +
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 367
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I L K + + A L+D+M +G+ PN +TY+ I K ++A
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL--------GFCKESI 348
+ G+ P+ Y ++ +CK Y+ + GFCK+ +
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGL 475
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
K + +Y+ F ++D A S+ + R++ P A F ++ K + Y V
Sbjct: 48 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLR--KCAEAKALL--DEMLSKGMKPNSVTYSHFI 293
+ Q ME G+K + N+ I+ C+L C +A L D++++ G + V+Y I
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+G CK G A + + + N+ +Y T++Y MCK A E ++KG
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
PN T +L++G K+ +A +L ++ E + T+N + G
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGF 275
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK--------EEKYEDV 235
+N+++ + +S + S+ +M+ + IKPN + L+ F + + +
Sbjct: 89 FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFH 148
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+K++ + G Y IH LCK+ + A LL + K ++ N+V Y+ IYG
Sbjct: 149 DKLVAL----GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYG 204
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CKD + +A Y M + G+SPN Y ++ G + A+ + I + P+
Sbjct: 205 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPD 264
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T LV G K+ E K + ++K+ +V T+N + G
Sbjct: 265 GYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG 309
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 23/242 (9%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLR 142
+ E N I + + PD++ +++I++ G + + A+ F EM +
Sbjct: 313 VKEVNTAKSIFNTMAQGGVNPDIR-----SYNILINGFCKIKKVDKAMNLFNEMHCKNII 367
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V +N+L+ L+ + ++ ++ G+ P++ TYN +I A ++ A +
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQL-VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIA 426
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
++ + + I+P+ ++ L+ G K E Y+ V+ YNV IH C
Sbjct: 427 LITKFKDQGIQPSMYTYTILIDGLCKVEGYD---------------ITVNTYNVMIHGFC 471
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K EA +LL +M PN+VTY I + ++A+K +R M GL S+
Sbjct: 472 KKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSA 531
Query: 323 VY 324
Y
Sbjct: 532 SY 533
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G+ P++ Y +I A C+ A +M + + PN F +LV G +K+
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E +++ M G+ +N I +LC + + E + L+D M G++P++ +Y+
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+C G +EA+K + M + GLSP Y T+++ C + A +E + KG
Sbjct: 456 ISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
P T +++ GL + SEAKEL + ++ ++ T+N I GL
Sbjct: 516 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 564
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 145/331 (43%), Gaps = 11/331 (3%)
Query: 76 LAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++ I+ L +A F+ G+ Q + + +P+ H + G+ + V+
Sbjct: 208 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK---WKEVVQM 264
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M L+ + +LL L + F++ G+ PD +N A+
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALSEMHS----FLDLMVENGLSPDHHIFNIFFSAYA 320
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A I +M + + PN ++GAL+ K + +D M G+ +
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
++N ++ LC + K A+ L+ EML +G+ PN+V ++ I C G E ++ +M
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ G+ P++ Y ++ C G + A ++ G P T +L+ G AS++
Sbjct: 441 EHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 500
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
+A L ++++ T V T+N I GL Q
Sbjct: 501 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 531
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 3/272 (1%)
Query: 118 ILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
++YG + E A EM + + + FN L+ L E +R+ I+ +
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL-IDLMEHV 443
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD +Y +I +C + + A + M + P ++ L+ G+ + +D
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M R G+ GV YN +H L + ++ +EAK L M++ G K + TY+ + G
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK +EA K ++ + + GL N + M+ + KGG E A+ A G VPN
Sbjct: 564 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
T + + L + E L +++ T
Sbjct: 624 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 655
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+H+ TF + + R + N LL L K E V ++ G PD +Y+
Sbjct: 115 KHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSI 174
Query: 187 VIKAFCESSDSSSAYSILAEMDR---KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
++K FC + + A +L M +S PN ++ ++ G K + ++ V Q M
Sbjct: 175 LLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI 234
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+K YN IH + K E +L++M ++G+KP+ TY + C
Sbjct: 235 DNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCA---LS 291
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
E F +M +GLSP+ ++ K G + A+ + G PN +L+
Sbjct: 292 EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALI 351
Query: 364 TGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEIEAGL 400
L +V +A+ + ++ E T N+ +N + GL
Sbjct: 352 DALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + M + A+ F +M +H L +V + AL+ AL + + F + G+ P
Sbjct: 319 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE-GVTP 377
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ +N ++ C A ++ EM + I PNA F L+ + + +++
Sbjct: 378 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 437
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ME G++ Y I C + EA+ + D M+S G+ P VTY+ ++G+C
Sbjct: 438 DLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 497
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
++A +R M G++P Y T+++ + + + A I G + T
Sbjct: 498 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 557
Query: 360 KSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTW 393
++ GL ++ V EA K L + N+ T+
Sbjct: 558 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 592
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R M+ +R ++ L+ +A E ++VF + + G+ P TYN ++
Sbjct: 435 RLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVF-DGMVSIGLSPTEVTYNTLLHG 493
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C +S AY + EM RK + P ++ ++ G ++ +++ + ++ M G K
Sbjct: 494 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN+ ++ LCK EA + + SKG++ N +T++ I K G E+A +
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
+ +GL PN Y + + + G E G PN + +LV L
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673
Query: 371 KVSEAKELIGLVKEK 385
+S A + + E+
Sbjct: 674 DISRAGAYLSKLDER 688
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA- 270
+ PN ++ L+ + + + ++ + G + + N + LC ++ EA
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS---GLSPNSSVYFTM 327
LL M G P++V+YS + GFC + EEA + R+M+N PN Y T+
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ +CK ++ A G ++ I G PN T L+ G K E +++
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQML 265
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P+ TY ++ C+S +++SA +L +M+ + IKP+ ++ ++ K+ + +D
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
ME G+K+ V YN I S C + + LL +M+++ + PN VT+S I
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDS 344
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+G EAK Y M G+ PN+ Y +++Y +C + A ++KG P+
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T L+ G A +V + L
Sbjct: 405 IWTYNILINGFCKAKQVDDGMRL 427
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ ++M+ K++ V + ++ L + F E +T GIK ++ TYN
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM-ETKGIKANVFTYN 304
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I +FC +L +M + I PN +F AL+ KE K + + M
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ YN I+ LC ++ EA ++D M+SKG P+ TY+ I GFCK ++
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R MS G+ ++ Y T++ C+ A +E +++G P T L+ G
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 366 LAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
L ++ EA ++ + K K ++ +N I G+
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 3/310 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFK 134
+ ++I I+ L + + + E++T+ ++ F +S+I + + + +
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKG-IKANVFTYNSLIGSFCSFGRWDDGAQLLR 324
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+M K+ +V F+AL+ +L E K ++ E T GI+P+ TYN +I C
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI-TRGIEPNTITYNSLIYGLCND 383
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A ++ M K P+ ++ L+ GF K ++ +D ++ + M GM + Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ I C+ RK AK + EM+S+G+ P +TY+ + G C +G EEA M
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
+ + +Y +++ MC + A +KG + + +++GL S +SE
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563
Query: 375 AKELIGLVKE 384
A L +KE
Sbjct: 564 ADALFRKMKE 573
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PDL T N ++ C S A ++A M +PN ++G ++ K +
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ ME +K V Y + I +LCK + +A + EM +KG+K N TY+ I FC
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G +++ + R M ++PN + ++ + K G A E I +G PN T
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTW 393
SL+ GL ++ EA +++ L+ K + D W
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGC-DPDIW 406
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 129/294 (43%), Gaps = 5/294 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTF 133
+ FS I+ L + E+ TR N ++ ++YG N + A +
Sbjct: 336 VTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT--ITYNSLIYGLCNDKRLDEANQMM 393
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + +N L+ AK + R+F + G+ D TY+ +I+ FC+
Sbjct: 394 DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM-SLRGMIADTVTYSTLIQGFCQ 452
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S A + EM + + P ++ L+ G + E+ +L M + M+ + +
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ IH +C K +A +L + SKG+K + +Y+ + G CK + EA +R M
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
G P+ Y T++ +G D T++ +E G+ + +T+K ++ L+
Sbjct: 573 EDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLS 626
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F+ M + +V FN L L K Y V + + + GI DL T N
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM-ELKGIAYDLYTLNI 130
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC A+S + ++ + +PN +F L+ G E + + +++ M
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ N ++ LC + +EA L+ M++ G +PN TY + CK GN A
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
R M + + P+ Y ++ +CK G + AL F E KG N T SL+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 367 AGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
+ + +L+ ++ K T NV T++ +
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSAL 341
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 4/274 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD++N + L +M + M + ++R ++ FN ++ + +
Sbjct: 170 PDVRNCN---RVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRA 226
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
V ++ + +G P+ +YN ++ + A ++ +M +K +A ++ L+
Sbjct: 227 VEV-LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIR 285
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
GF K+E +E+ N + + M G V YN ++SLC+L + ++A+ LD M+++ + P
Sbjct: 286 GFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP 345
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+ V+Y+ IYG+ + GNF EA + + + L P+ Y T++ C+ G+ + A G
Sbjct: 346 DLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMK 405
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ I G P+ T LV G + AKEL
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKEL 439
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + TYN ++ + C S A L M + + P+ S+ L+ G+ + + +
Sbjct: 307 GALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + + V YN I C+ AK + D+M+ G+ P+ VT++ + G
Sbjct: 367 LLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ GN AK+ + M + GL P+ Y T + K G+ A G +E A+G+ P+
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPD 486
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ GL +A EL+
Sbjct: 487 LITYNVLINGLCKLGNFDDANELV 510
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 150/326 (46%), Gaps = 13/326 (3%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
++L++ R P +++++ +N LS F+ + +E++ + + AH+
Sbjct: 228 EVLDVMRMFGCDPND----VSYNVLVNGLSGKGEFDRAKELIEQMS----MLGLKVSAHT 279
Query: 117 ----IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
I + + M E A +EM +V +N ++ +L + +R +++
Sbjct: 280 YNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARR-YLDVM 338
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ PDL +YN +I + + + A + +E+ K++ P+ ++ L+ G +
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + M ++G+ V + + + C++ AK L DEMLS+G+KP+ + Y+
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTR 458
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G K GN +A M G P+ Y ++ +CK G+++ A ++ +G
Sbjct: 459 IVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKEL 378
VP+ T S++ + + +A+E+
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEV 544
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+M +H L V F L+ + K +F E + G+KPD Y I +
Sbjct: 407 DMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM-LSRGLKPDCIAYTTRIVGELKL 465
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ S A+ + EM + P+ ++ L+ G K ++D N+++Q M G+ Y
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY 525
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
IH+ +A+ + +ML KG+ P+ VTY+ I+ + G + AKK++ M +
Sbjct: 526 TSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQD 585
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
G+SPN Y ++Y +CK + A E +KG PN T L+
Sbjct: 586 KGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ NRV+K + S + + + M + I+P +F ++ KE +
Sbjct: 167 GLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRA 226
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+VL +M +G YNV ++ L + AK L+++M G+K ++ TY+ I G
Sbjct: 227 VEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRG 286
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK FEEA R M G P Y T++Y +C+ G A + + + +P+
Sbjct: 287 FCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPD 346
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ +L+ G + +EA L ++ K +V T+N + G
Sbjct: 347 LVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDG 391
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 26/292 (8%)
Query: 105 PDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLA------LT 156
PDL +++ ++YG + + A+ F E+ L SV +N L+ L
Sbjct: 345 PDLV-----SYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLD 399
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
IAK K+ + K +G+ PD+ T+ +++ FC+ + A + EM + +KP+
Sbjct: 400 IAKGMKD------DMIK-HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
++ + G E K + +K M M+ G + YNV I+ LCKL +A L
Sbjct: 453 IAYTTRIVG---ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANEL 509
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+ +M +G+ P+ VTY+ I+ G +A++ + M G+ P+ Y +++
Sbjct: 510 VQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAV 569
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G + A + E KG PN T +L+ GL + + A L ++ K
Sbjct: 570 RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESK 621
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ F + + +M + P+ + ++ + +V +V +M +
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
++ + +N + S CK + A +LD M G PN V+Y+ + G G F+ AK
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ MS GL ++ Y ++ CK +E A +E + +G +P T +++ L
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
+VS+A+ + +V E ++ ++N + G
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYG 356
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+ +++ A I+ ++ + VF + K GI P + TY +I ++ A E
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKK-GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDE 582
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M K + PN ++ AL+ G KE + + ME G+ Y + I+ L+
Sbjct: 583 MQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQY 642
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+A L +ML + +KP+S T+S + KD
Sbjct: 643 WQDALKLYKDMLDREIKPDSCTHSALMKHLSKD 675
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ F+ EHK +L L K +K V + E + G
Sbjct: 73 ITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILEC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ + A + + + +KP+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G + V Y+V I+ LCK K EA L DEML KG+ PN VT++ I G
Sbjct: 192 RLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ + + GLSP+ Y T++Y CK GD + E KG P+
Sbjct: 252 CKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 42/268 (15%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALL---LALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
A F + + L+ SV +FN L+ + + I + +K G +PD+ TY+
Sbjct: 155 AQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAM----HASGAQPDVYTYS 210
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+ S A+ + EM K + PN +F L+ G K K + ++ + +
Sbjct: 211 VLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQ 270
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE-- 303
G+ + YN I+ CK + + L+DEM KG+KP+ +TY+ I G CK+G+ E
Sbjct: 271 GLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 304 ---------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+A+K R M + GL P+S Y ++
Sbjct: 331 FEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNE 390
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTT 358
CK GD T KE G VP+ T
Sbjct: 391 FCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ F KE + V + ++G+K V +N ++ K+ E L + M
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ G +P+ TYS I G CK+ +EA + + M GL PN + T++ CK G +
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
A+ K+ +++G P+ T +L+ G + + ++LI GL +K T
Sbjct: 259 LAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKIT 313
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFYKE +L+ G + + +N+ +H CK + A+ + D + G
Sbjct: 119 LVWGFYKE--------ILEC----GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWG 166
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+KP+ V+++ + G+ K G +E + M SG P+ Y ++ +CK + A
Sbjct: 167 LKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAH 226
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
E + KG VPN T +L+ G K+ A E+ ++ + + ++ T+N + G
Sbjct: 227 ELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGF 286
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 1/217 (0%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ + +VI + +S+ ++ + E + + + + F L+ + +
Sbjct: 20 IHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILET-KGTQRSDIYVFSGLITAYLE 78
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + L KL+ E+L G +
Sbjct: 79 SGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECGYPASLYF 138
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ FCK+G A+ + ++ GL P+ + T++ K G +
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
A G P+ T L+ GL SK+ EA EL + EK
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEK 235
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 198 RLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G + A + Y+ M + L P+ Y T++Y +CK GD + A E + KG P+
Sbjct: 258 CKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFE 338
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDXYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K+ + + ++ + M +
Sbjct: 220 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLL 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM+ KG+KP+ +TY+ I G CK+G+ +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G VP+ T L+ G
Sbjct: 400 KGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 188
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 249 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
GL P+ Y T++ CK GD +TA K I + + +L++GL +
Sbjct: 309 VMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 369 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 404
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 18/229 (7%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS-FGALV--A 224
++ P + L +Y +I C S A S++ + + K +AS+ F A++
Sbjct: 6 WLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETK 65
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR---------------IHSLCKLRKCAE 269
G + + Y + +E ++ + Y + + L KL+
Sbjct: 66 GTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKL 125
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
+E+L G + ++ ++ FCKDG+ A+ + ++ GL P+ Y T++
Sbjct: 126 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 185
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ GD + +A G P+ T L+ GL SK+ +A EL
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANEL 234
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A ++ EHK +L L K +K V + E + G
Sbjct: 62 ITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 120
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ SF L+ G+ + ++
Sbjct: 121 YPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGF 180
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A + DEML KG+ PN VT++ I G
Sbjct: 181 RLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGH 240
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 301 ITYTTLIDGCCKEGDLETAFE 321
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 130/278 (46%), Gaps = 18/278 (6%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + VF K +G++P + ++N ++ +
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITK-WGLRPSVVSFNTLMNGYI 171
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGV 251
D + + M ++P+ ++ L+ G KE K +D N++ +M+++ + +GV
Sbjct: 172 RLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGV 231
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ + I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A
Sbjct: 232 T-FTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDE 290
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL P+ Y T++ CK GD ETA K I + + +L++GL +
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEER 350
Query: 372 VSEAKEL------IGL---------VKEKFTKNVDTWN 394
+A+++ +GL + +F K D W
Sbjct: 351 YLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWT 388
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHAS-GVQPDVYTYSVLI 202
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 203 NGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLX 262
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ E A +
Sbjct: 263 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEH 322
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ Y A +E ++ G P+ T ++
Sbjct: 323 RKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCK 382
Query: 369 ASKVSEAKELI 379
V +L+
Sbjct: 383 KGDVWTGSKLL 393
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A+ ++ EM K +KP+ ++ L+ G KE E
Sbjct: 261 LXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAF 320
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP++ TY+ I F
Sbjct: 321 EHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEF 380
Query: 297 CKDGNFEEAKKFYRIMS 313
CK G+ K + M
Sbjct: 381 CKKGDVWTGSKLLKEMQ 397
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ + P D +S+ IN L + + + ++ +E+ + + N I + +
Sbjct: 188 ASGVQP----DVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKN 243
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A+ +K+M L + +N L+ L D K+ + E G+KPD T
Sbjct: 244 GRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDKIT 302
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D +A+ M ++ I+ + ++ AL++G +EE+Y D KVL+ M
Sbjct: 303 YTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREML 362
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
G+K Y + I+ CK LL EM
Sbjct: 363 SVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 18/216 (8%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS------------------FGAL 222
LD+Y +I C S A S++ + + K +AS+ F L
Sbjct: 2 LDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 61
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ + + D + ++ + + L KL+ +E+L G
Sbjct: 62 ITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 121
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
+ ++ ++ FCK+G+ A+ + ++ GL P+ + T++ + GD +
Sbjct: 122 PASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFR 181
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A E+
Sbjct: 182 LKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEM 217
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++I+++G Q + A++ F EM + K++ + F L+ L KE ++ +
Sbjct: 154 TYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDM 213
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K YG++P + Y ++KA C+ + S A+ + E IK +++ + L++ K +
Sbjct: 214 LKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGR 273
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+V+++L+ M G K YNV I+ C A +LDEM+ KG+KP+ ++Y+
Sbjct: 274 SNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNM 333
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ + +EEA + M G SP++ Y + +C+G +E A E + KG
Sbjct: 334 ILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAAILDEMLFKG 393
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
+ P ++ + L + K+ ++I + + W+
Sbjct: 394 YKPRRDRLERFLQKLCESGKLEILSKVISSMHRGNADDAKVWS 436
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 11/291 (3%)
Query: 119 LYGQANMTEHAVRTFKEMD------EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
L + N A++ F+ D + R+S+ ++ ++ L +K + E+ +V ++
Sbjct: 15 LLRRENDPSAAIKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLQLK 74
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
I P + VI F S A + EM + + S +L+ K ++
Sbjct: 75 TDTRIVPTEILFCNVINFFGRGRLPSRALHMFDEMPQYRCQRTVKSLNSLLNTLLKCGEF 134
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC-AEAKALLDEMLSKGMKPNSVTYSH 291
E + + L ++ +G K YN+ IH C R C +A L DEM+ K +KP VT+
Sbjct: 135 EKMKERLSSIDEFG-KPDACTYNILIHG-CSQRGCFDDALKLFDEMVKKKVKPTGVTFGT 192
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNS-GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I+G CK+ +EA K + M G+ P +Y ++V +C+ G+ A E+
Sbjct: 193 LIHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEG 252
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ +L++ L A + +E ++ + EK K + T+N + G
Sbjct: 253 KIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLINGF 303
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 139/305 (45%), Gaps = 36/305 (11%)
Query: 116 SIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF-- 171
SII+ Y +A + AV TF M+ + + H++ AFN+LL AL +K+ ++ + +F +
Sbjct: 142 SIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNN 201
Query: 172 -----PKTY--------------------------GIKPDLDTYNRVIKAFCESSDSSSA 200
KTY G +PD+ TY ++ A C++ A
Sbjct: 202 RFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEA 261
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
++ +M + +P + LV + + + ED ME+ G+ V +YN + +
Sbjct: 262 VCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTA 321
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
CK++K A ++D+M G+ PNS T++ + G +EA + +R M P+
Sbjct: 322 FCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPD 380
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
S Y M+ C+ E AL K K ++P+ T L+ GL +VS+A L+
Sbjct: 381 SDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLE 440
Query: 381 LVKEK 385
+ EK
Sbjct: 441 DMIEK 445
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 2/251 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V F+ ++ A+ + E F + YG+ +L +N ++ A C+S + A I
Sbjct: 137 NVETFSIIMRKYARAQKFDEAVYTF-NIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEI 195
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+M+ + P+A ++ L+ G+ + + +V M G + + Y + + +LCK
Sbjct: 196 FDKMNNR-FSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCK 254
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ EA ++ +M S+G +P + YS ++ + D E+A + M G+ P+ V
Sbjct: 255 TGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVV 314
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +V CK ++ A + G PN T ++ L K EA + +
Sbjct: 315 YNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMI 374
Query: 384 EKFTKNVDTWN 394
++ + DT+
Sbjct: 375 KRCKPDSDTYT 385
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G + +Y+ V+ + + + ++A M RK N +F ++ + + +K+
Sbjct: 96 KRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVM-RKEGVANVETFSIIMRKYARAQKF 154
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ +MERYG+ ++ +N + +LCK + +A+ + D+M ++ P++ TYS
Sbjct: 155 DEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSIL 213
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G+ + N + ++ Y M +G P+ Y MV +CK G E A+ ++ ++G
Sbjct: 214 LEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGC 273
Query: 353 VPNFTTMKSLVTGLAGASKVSEA-KELIGLVKEKFTKNVDTWNEI 396
P LV ++ +A + + K+ +V +N +
Sbjct: 274 QPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNAL 318
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
AA P D + + I ++ L + ++++ +R ++ + YG
Sbjct: 235 AAGCQP----DIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVD 290
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
E AV TF +M++ + V +NAL+ A K + RV + + +GI P+ T
Sbjct: 291 MRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDM-EGHGISPNSRT 349
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N ++ AY + M ++ KP++ ++ ++ F + +K E KV + M
Sbjct: 350 WNIILNTLISLGKDDEAYRVFRNMIKRC-KPDSDTYTMMIKMFCENDKIEMALKVWKYMR 408
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
+ ++V I+ LC + ++A LL++M+ KG++P T+ K+G
Sbjct: 409 LKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 465
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KP + TY +I +C + + A +L EM ++P+ ++ AL+ G+ K K
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPAL 424
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ + + +MY + I C+L + ++AK +L ML+ G+ P+ +TYS I G
Sbjct: 425 DLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGM 484
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G E K+ M SG+ PN+ +Y T+V++ CK G + AL + + G V N
Sbjct: 485 CKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANS 544
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
+L+ ++EA++
Sbjct: 545 VIHNALLCSFYREGMIAEAEQ 565
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 74 DRLAFSIAINKL-----SEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEH 128
D ++I I+KL S Y + + + E+ PD + H G+ N+
Sbjct: 298 DLYTYNIMIDKLCKLKRSARAYL--LLKRMREVNLTPDECSYNTLIHGFFGEGKINL--- 352
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F +M L+ SV + AL+ E +RV E T G++P TY+ ++
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT-GVRPSELTYSALL 411
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ S A ++ + +SI N + + L+ GF + + ++L+ M G+
Sbjct: 412 NGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGID 471
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I+ +CK+ E K +L M G+ PN+V Y+ ++ FCK G+ +EA K+
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531
Query: 309 YRIMSNSGLSPNSSVY-----------------------------FTMVYF------MCK 333
+ + SGL NS ++ F + F C+
Sbjct: 532 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 591
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G+ A + GW P+ T SL+ GL + +AKE + + EK
Sbjct: 592 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 643
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M +L ++V +N +L K R+ + K GI+ DL TYN +I C
Sbjct: 253 LQKMKNCRLPNAV-TYNTILNWYVKKGRCKSALRILDDMEKN-GIEADLYTYNIMIDKLC 310
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S+ AY +L M ++ P+ S+ L+ GF+ E K + M R +K V+
Sbjct: 311 KLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I C+ + EA+ +L EM G++P+ +TYS + G+CK A + +
Sbjct: 371 TYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYL 430
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ +S N ++Y ++ C+ G+ A K +A G P+ T +L+ G+ +
Sbjct: 431 RSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMI 490
Query: 373 SEAKELI 379
E KE++
Sbjct: 491 HETKEIL 497
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 132/310 (42%), Gaps = 1/310 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L +S +N + + ++ L++R N + I + Q A + K
Sbjct: 405 LTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKC 464
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + V ++AL+ + E K + K+ G+ P+ Y ++ FC++
Sbjct: 465 MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKS-GVLPNNVLYTTLVFYFCKAG 523
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A ++ R + N+ AL+ FY+E + + Q M R + V+ +N
Sbjct: 524 HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I S C+ EA ++ D M+ G P+ TY + G C+ G+ +AK+F +
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 643
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ + T++ +CK G + AL C++ + + +P+ T L+ G KV A
Sbjct: 644 ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPA 703
Query: 376 KELIGLVKEK 385
L+ ++ EK
Sbjct: 704 LILLQMMLEK 713
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
MDE + S+ + N +L AL + + E +F++ D+ T N V+ + C
Sbjct: 186 MDECGFKASLFSCNNILNAL-VGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQG 244
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A S+L +M + PNA ++ ++ + K+ + + ++L ME+ G+++ + YN
Sbjct: 245 KLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYN 303
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I LCKL++ A A LL M + P+ +Y+ I+GF +G A + M
Sbjct: 304 IMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQ 363
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
L P+ + Y ++ C+ G + A E G P+ T +L+ G SK+ A
Sbjct: 364 SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPA 423
Query: 376 KELIGLVKEK 385
+LI ++ +
Sbjct: 424 LDLIKYLRSR 433
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 28/348 (8%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
+L++ L P D +A++ +N L S +E+ + L + +S+
Sbjct: 706 LLQMMLEKGLVP----DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 761
Query: 118 ----ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+ GQ N E R + M E+++ S ++N L+ ++ + K
Sbjct: 762 MNGYLKGGQINEIE---RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 818
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
GIKPD TY +I CE A L +M + + P+ +F L+ F ++ K
Sbjct: 819 E-GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 877
Query: 234 DVNKVLQMMERYG-----------MKS-GVSMYNVR----IHSLCKLRKCAEAKALLDEM 277
+ ++ M+ G MK+ GV V + LCK K EA + +
Sbjct: 878 NALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 937
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ GM P T++ ++G CK+ ++A ++M + GL + Y ++ +C
Sbjct: 938 MRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCI 997
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
AL +E +KG +PN TT +L + + + ++L+ ++++
Sbjct: 998 CDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 142/332 (42%), Gaps = 6/332 (1%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
L S ++IL+ A + P D + +S IN + + + + L ++ L
Sbjct: 452 LGEVSKAKQILKCMLADGIDP----DVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 507
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
N + + + +A + A++ F ++ L + NALL + E ++ F
Sbjct: 508 NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ-F 566
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
++ I D+ ++N +I ++C+ + A+S+ M R P+ ++G+L+ G +
Sbjct: 567 KQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 626
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ + + N + +CK EA L ++M+++ + P++ T
Sbjct: 627 GGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYT 686
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
Y+ + GFCK G A ++M GL P++ Y ++ + G + A +E I
Sbjct: 687 YTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII 746
Query: 349 AK-GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
K G + S++ G +++E + L+
Sbjct: 747 CKEGLYADCIAYNSMMNGYLKGGQINEIERLM 778
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T I PD TY ++ FC+ A +L M K + P+ ++ L+ G E + +
Sbjct: 677 TRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 736
Query: 234 DVNKVLQ-MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ + Q ++ + G+ + YN ++ K + E + L+ M + P+S +Y+
Sbjct: 737 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 796
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
++G+ K G YR M G+ P++ Y +++ +C+ G E A+ F ++ + +G
Sbjct: 797 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
P+ L+ + SK+S A +L +K
Sbjct: 857 FPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K G+ P + +++ C+ A + + + R + P ++F L+ G KE K
Sbjct: 903 KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 962
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+D + Q+ME G+K V YNV I LC + +A L +EM SKG+ PN TY
Sbjct: 963 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 1022
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
G ++ +K + + + G+ P+
Sbjct: 1023 TGAMYATGTMQDGEKLLKDIEDRGIVPS 1050
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 23/308 (7%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAV 130
D +A++ +N + N I + + + + P + H I GQ + T +
Sbjct: 754 DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY-- 811
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+++M + ++ + L+ L E+ F+E G+ PD ++ +IKA
Sbjct: 812 -LYRDMVKEGIKPDNVTYRLLIFGLC-EYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKA 869
Query: 191 FCESSDSSSAYSILAEM--------------DRKS--IKPNASSFGALVAGFYKEEKYED 234
F E S S+A + + M D K+ + P+ + ++V G K K E+
Sbjct: 870 FSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 929
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
V + R GM ++ + +H LCK K +A L M S G+K + VTY+ I
Sbjct: 930 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 989
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C +A Y M + GL PN + Y T+ M G + K+ +G VP
Sbjct: 990 GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 1049
Query: 355 NFTTMKSL 362
++ +SL
Sbjct: 1050 SYKHPESL 1057
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 159/357 (44%), Gaps = 11/357 (3%)
Query: 47 TLLKSESNPEKILEICRA-AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR- 104
TL+K + +++E A+ + D + ++ ++ L +A F+ L E+ R
Sbjct: 49 TLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG 108
Query: 105 --PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PD + +G E A R +++ + + +S AF ++ L +
Sbjct: 109 CAPDTVTFSTLIDGLCKFGS---EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSV 165
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E+ + G P + +N VI FC++ D SAY +L M K PN +F L
Sbjct: 166 ELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 225
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G K + + ++L+ M G V Y+ I+ LCK + +A L M +
Sbjct: 226 ITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 285
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN VT++ I G CK EEA++ Y M +G +P+ Y +++ +CK + A
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 345
Query: 343 FCKESIAKGWV--PNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
++I + V N T +L G A ++++A + ++ +K F+ ++ T+ +
Sbjct: 346 L-FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 10/349 (2%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+LE+ P + F+I I L +AN Q LE++ T N ++
Sbjct: 205 KLLEVMIEKGCVP----NVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + + A F+ M+ +V N L+ L AK +E ++++ +T G
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET-G 319
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP-NASSFGALVAGFYKEEKYEDV 235
PD+ TYN +I C+S A+ + + + NA ++ L G+ + D
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M+ G ++ Y I CK + E L++EM SKG P T S + G
Sbjct: 380 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 439
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK---GW 352
+ + E A + + M+ G + ++ +Y +V M + + AL ++ I K +
Sbjct: 440 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF 499
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
P+ + + +LV L + +AK+L+ + E+ F V ++N + +GL
Sbjct: 500 NPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 71/258 (27%)
Query: 214 PNASSFGALVAGF---------------YKEEKYE--------------DVNKVLQMMER 244
PN ++G L+ GF K +E D +V++ +E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 245 Y-----GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ V Y +H+LCK K EA+ +L EM+++G P++VT+S I G CK
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 300 GNFEEAKK-----FYRIMSNS-------------------------------GLSPNSSV 323
G+ E+A + R M NS G +P +
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
+ ++ CK D ++A + I KG VPN T L+TGL A++V EA++L+ +V
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ NV T++ + GL
Sbjct: 247 TGGCSPNVVTYSTVINGL 264
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 111 RFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
R + S +L G + N TE A++ F M +N ++ + A + + V
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488
Query: 169 IEF--PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ + P + ++++ C+ + A +L +M + SS+ L++G
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ +++++ +V + M G +S NV I LC K +A L+ M G P+
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 608
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
T + I G+CK G + A+K M+ +GL PN + +
Sbjct: 609 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 646
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEM----DRKSIKPNASSFGALVAGFYKEEK 231
G D YN V++ +S + A ++L ++ DRK P++S+ ALV + +
Sbjct: 460 GCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRK-FNPSSSAVDALVESLCQVGR 518
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+D ++L M G + VS YN + L +L++ EA + + M+S G P T +
Sbjct: 519 TDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 578
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I C ++A + + MS G P+ T++ CK G + A +E G
Sbjct: 579 VISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 638
Query: 352 WVPNFTT 358
PN TT
Sbjct: 639 LEPNDTT 645
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/399 (18%), Positives = 148/399 (37%), Gaps = 83/399 (20%)
Query: 76 LAFSIAINKLSEANYFNG---ISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAV 130
+ +S IN L + + + Q +E P++ H+I++ G +A E A
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT-----HNILIDGLCKAKRIEEAR 309
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---------TY------ 175
+ + M E + +N+L+ L + E ++F P+ TY
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369
Query: 176 --------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
G PDL TY +I +C++S + ++ EM K P
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV------------------- 256
++ A++ G ++ E ++ M G +YN+
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE 489
Query: 257 -------------------RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ SLC++ + +AK LL +M +G +Y+ + G
Sbjct: 490 QVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLS 549
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ ++EA + + M ++G +P S ++ ++C + A + G P+
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
T +L+ G + + A++L+ + E + DT +++
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDL 648
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML + PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A K+ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
K + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 KYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
+A+ + P+ + +S+ IN L + + + ++ +E+ + N I + +
Sbjct: 198 QASGVQPDVY----TYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCK 253
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ A+ +K+M L + +N L+ L D K+ + + E G+KPD
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDKI 312
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I C+ D +A+ M +++I+ + ++ AL++G +E + D K+L+ M
Sbjct: 313 TYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
G+K + Y + I+ CK LL EM G P+ VT
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +SS ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R ++ L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + ++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGLPQ 402
T +L+ G + A E ++KE + + + +GL Q
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQ 358
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 150/340 (44%), Gaps = 29/340 (8%)
Query: 83 NKLSEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT------ 132
++S+ F+G I+ YLE R ++ R H + + EH ++
Sbjct: 61 TQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLV 120
Query: 133 ---FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++E E S+ FN L+ + + + + VF K +G++P + ++N ++
Sbjct: 121 WGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMN 179
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ + D + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A+
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLX 299
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
MS GL P+ Y T++ CK GD ETA + K I + + +L++GL
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQE 359
Query: 370 SKVSEAKEL------IGLVKE---------KFTKNVDTWN 394
+ +A+++ +GL E +F K D W
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 39/279 (13%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ M + + YN I+ LCK +A+ L DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFE-----------------------------------EAKKFYRIMSNSGLSP 319
G CK+G+ E +A+K R M + GL P
Sbjct: 320 GSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
Y ++ CK GD T KE G+VP+ T
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 1/210 (0%)
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
I F T+ + P+ +++ + +S+ ++ J E I + F L+ + +
Sbjct: 20 IHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQIS-DIYVFSGLITAYLE 78
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
D + ++ + + + I L KL+ +E L G +
Sbjct: 79 SGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYF 138
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ ++ F K+G A+ + ++ GL P+ + T++ K GD +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D +++ I+ S+AN + +Q + +++R PD+ S+ G+ E A
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGK---LELAF 186
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
E+ + + SV + L+ A + E +F E + G++PDL TYN +I+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL-VSRGLRPDLYTYNAIIRG 245
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A + + + P+ S+ L+ F + ++ED ++++ M G +
Sbjct: 246 ICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPN 305
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V +++ I S C+ + EA +L+ M KG+ P+S +Y I FCK+G + A ++
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + G P+ Y T++ +CK G + AL ++ G P ++ + L
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+A E+I ++++ + T+N + + L
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCL 456
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 153/352 (43%), Gaps = 20/352 (5%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFH 113
++ + R+ +P D + ++I I L + ++EL +P +
Sbjct: 152 QVFDRMRSRGFSP----DVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTIL 207
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-FIEFP 172
+ IL G+ N A+ F E+ LR + +NA++ I K+ E + + F+
Sbjct: 208 IEATILEGRIN---EALELFDELVSRGLRPDLYTYNAIIRG--ICKEGMEDRALDFVRHL 262
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G PD+ +YN ++++F S ++ +M +PN + L++ F +E +
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ VL++M+ G+ Y+ I + CK + A L++M+S G P+ V Y+
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTI 382
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ CK G + A + + G P Y TM + G+ AL E I KG
Sbjct: 383 LATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGI 442
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKE----KFTKNVDTWNEIEAGL 400
P+ T SL++ L V EA IGL+ + +F V ++N + G+
Sbjct: 443 DPDEITYNSLISCLCRDGLVDEA---IGLLVDMEATRFQPTVISFNIVLLGM 491
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+++ K+ RV +E +TYG PD+ +YN +I F +++ SA + M + P+
Sbjct: 110 SRNLKKAMRV-MEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVV 167
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ ++ K E +V+ + + G K V Y + I + + EA L DE+
Sbjct: 168 TYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL 227
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+S+G++P+ TY+ I G CK+G + A F R +S G +P+ Y ++ +
Sbjct: 228 VSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW 287
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
E K+ + G PN T L++ +V EA ++ ++KEK
Sbjct: 288 EDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E + G KPD+ ++IK F S + A ++ ++ P+ S+ A+++GF
Sbjct: 84 FLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFS 142
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + + N+V M G V YN+ I SLC K A ++DE+L G KP+ +
Sbjct: 143 KANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVI 202
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I +G EA + + + + GL P+ Y ++ +CK G + AL F +
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
A+G P+ + L+ S+ + + L+
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLM 294
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 133/313 (42%), Gaps = 45/313 (14%)
Query: 104 RPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
RPDL + ++ I+ G + M + A+ + + V ++N LL + +
Sbjct: 233 RPDL-----YTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW 287
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
++ +R+ + + G +P++ T++ +I +FC A ++L M K + P++ S+
Sbjct: 288 EDGERLMKDMVLS-GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDP 346
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE------------ 269
L++ F KE + + + L+ M G + YN + +LCK CA+
Sbjct: 347 LISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKF-GCADLALDVFEKLDEV 405
Query: 270 ------------------------AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
A ++ EM+ KG+ P+ +TY+ I C+DG +EA
Sbjct: 406 GCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEA 465
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M + P + ++ MCK + + KG +PN T+ L+ G
Sbjct: 466 IGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEG 525
Query: 366 LAGASKVSEAKEL 378
+A A +EA EL
Sbjct: 526 IAYAGWRAEAMEL 538
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 107/266 (40%), Gaps = 50/266 (18%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHA 114
+LE+ + LTP+S+ ++ I+ + + +YLE++ + PD+ N
Sbjct: 328 VLEVMKEKGLTPDSY----SYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTIL 383
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
++ +G A++ A+ F+++DE
Sbjct: 384 ATLCKFGCADL---ALDVFEKLDE------------------------------------ 404
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G P + YN + A + A +++EM RK I P+ ++ +L++ ++ ++
Sbjct: 405 VGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDE 464
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+L ME + V +N+ + +CK + E LL M+ KG PN +Y I
Sbjct: 465 AIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIE 524
Query: 295 GFCKDG----NFEEAKKFYRIMSNSG 316
G G E A YR+ SG
Sbjct: 525 GIAYAGWRAEAMELANSLYRLGVISG 550
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 35/174 (20%)
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSV---------------------------------- 287
C+ K E+ L+ ++SKG KP+ V
Sbjct: 73 CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVY 132
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y+ I GF K + A + + M + G SP+ Y M+ +C G E A E
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ G P+ T L+ +++EA EL LV ++ T+N I G+
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN VI+ FCE + A + EM + ++G L+ F K K ++
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
L+ M+ G+++ + +Y I C + KAL DE+L +G P ++TY+ I GF
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +EA + + M G+ PN Y ++ +C G + AL I K PN
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNA 352
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
T ++ L V++A E++ L+K++ T+ N+ T+N + GL
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI-TYNILLGGL 397
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N ++K C + + A S+L EM R S+ P+ S+ ++ GF + ++ E ++ M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + + + I + CK K EA L EM G++ + V Y+ I GFC G +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
K + + G SP + Y T++ CK G + A + I +G PN T L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 364 TGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
GL G K EA + + L+ EK + N T+N I
Sbjct: 325 DGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNII 358
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
L E++ R L + F +++I + + E A+ EM S+ + L+ A
Sbjct: 165 LREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
A E F++ K G++ DL Y +I+ FC+ + ++ E+ + P A
Sbjct: 224 KAGKMDEAMG-FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
++ L+ GF K + ++ +++ + M G++ V Y I LC + K EA L+
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNL 342
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ K +PN+VTY+ I CKDG +A + +M P++ Y ++ +C GD
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 337 YETA--LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ A L + + P+ + +L+ GL +++ +A ++ L+ EK
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ + + + A+ +LA M ++ N + L+ G + + +L+ M R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I C+ ++ +A L +EM G + VT+ I FCK G +EA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
F + M GL + VY +++ C G+ + E + +G P T +L+ G
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ EA E+ + E+ + NV T+ + GL
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A+S +M N S L+ + + K VL +M + G V +N+ +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC+ +C +A +LL EM + P+ +Y+ I GFC+ E+A + M SG S
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ + ++ CK G + A+GF KE G + SL+ G ++ K L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 380 GLVKEK 385
V E+
Sbjct: 271 DEVLER 276
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
DTY +I FC++ + A +L +M ++P+ + L++ KE + ++ +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+R V +N+ I K A++LL M G+ P+ TYS I F K G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+EA F+ M +SG P++ + +++ + G+ + K+ + K V
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++I INKL + + +E +K TRPD N ++ L + ++ E +
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD--NITYNILLGGLCAKGDLDEASKLL 410
Query: 133 FKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + D V ++NAL+ L + ++ + G D T N ++ +
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-AGDRVTTNILLNST 469
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
++ D + A + ++ I N+ ++ A++ GF K +L M ++ V
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + SLCK +A L +EM P+ V+++ I G K G+ + A+
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS +GLSP+ Y ++ K G + A+ F + + G+ P+ S+ L
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV---LKYCIS 646
Query: 372 VSEAKELIGLVKEKFTKNV 390
E +L LVK+ K++
Sbjct: 647 QGETDKLTELVKKLVDKDI 665
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 133/330 (40%), Gaps = 34/330 (10%)
Query: 82 INKLSEANYFNGISQYLEEL-KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
+ LS+ F + +EE+ K P L + + A+M + A+ EM +
Sbjct: 154 VKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFG 213
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVF----IEFPKTY--------------------- 175
F LL AL K+ ++F + FP
Sbjct: 214 FEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKY 273
Query: 176 --------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
G +PD+ Y ++ + + + AY +L +M R+ +PNA+ + L+
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K ++ E+ KV MERY ++ V Y + CK K + +LD+M+ KG+ P+ +
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY H + K +FEE + M P+ +Y ++ CK G+ + A+ E
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
G P T ++ GLA + EA +
Sbjct: 454 EENGLSPGVDTFVIMINGLASQGCLLEASD 483
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 7/236 (2%)
Query: 82 INKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
+ K+ EA Y + + E PD+ + + + + Y A A ++M
Sbjct: 265 VGKMMEAKY---VLVQMNEAGFEPDIVD---YTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ + L+ AL +E +VF+E + Y + D+ TY ++ FC+ Y
Sbjct: 319 EPNANCYTVLIQALCKVDRMEEAMKVFVEMER-YECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L +M +K + P+ ++ ++ K+E +E+ ++++ M + + +YNV I
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
CKL + EA L +EM G+ P T+ I G G EA ++ M GL
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A F M + + +V +++L+ + K+ + K +F + G+ PD+ +YN
Sbjct: 235 VKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQG-GVNPDIQSYN 293
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC+ + +A ++ EM + I PN ++ +L+ G K K K++ M
Sbjct: 294 ILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDR 353
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + Y+ + +LCK +A ALL ++ +G++PN TY+ I G CK G E+A
Sbjct: 354 GQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDA 413
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + G + N + Y M++ C G + AL + G +PN T + ++
Sbjct: 414 QNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRS 473
Query: 366 LAGASKVSEAKELI 379
L + +A++L+
Sbjct: 474 LFDKDENDKAEKLL 487
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE K VF K G KP++ TY+ ++ +C + + A SI M + + P+ S+
Sbjct: 236 KEAKNVFAAMMKK-GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNI 294
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ GF K + + + + M + V YN I LCK K + A L+DEM +G
Sbjct: 295 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 354
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
P+ +TYS + CK+ ++A + + GL PN Y ++ +CKGG E A
Sbjct: 355 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 414
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
++ + KG+ N T ++ EA ++ ++E
Sbjct: 415 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEE 457
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 11/249 (4%)
Query: 149 NALLLA--LTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
N +L A ++ D ++ F+ F Y G+ + T FC+ A ++ A
Sbjct: 191 NGMLFAEVTSLRGDVNNLRECFVSFMFQYLGMMAPVST-------FCKEGKVKEAKNVFA 243
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
M +K KPN ++ +L+ G+ ++ + M + G+ + YN+ I+ CK++
Sbjct: 244 AMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIK 303
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
A L +EM + + PN VTY+ I G CK G A K M + G P+ Y
Sbjct: 304 MTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYS 363
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKE 384
+++ +CK + A+ + +G PN T L+ GL + +A+ + L+ +
Sbjct: 364 SLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVK 423
Query: 385 KFTKNVDTW 393
+ NV+T+
Sbjct: 424 GYNINVNTY 432
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 85 LSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLR 142
+ E N I + + PD+Q +++I++ G + MT+ A+ F+EM K+
Sbjct: 267 VKEVNKAKSIFNNMAQGGVNPDIQ-----SYNILINGFCKIKMTDAAMNLFEEMHCRKII 321
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V +N+L+ L + ++ E G PD+ TY+ ++ A C++ A +
Sbjct: 322 PNVVTYNSLIDGLCKSGKISYALKLVDEM-HDRGQPPDIITYSSLLDALCKNHPGDKAIA 380
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L ++ + ++PN ++ L+ G K + ED + + + G V+ Y V IH C
Sbjct: 381 LLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFC 440
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG-FCKDGNFEEAKKFYRIMSNSGL 317
EA A+L +M G PN+VTY I F KD N ++A+K M GL
Sbjct: 441 NNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDEN-DKAEKLLLEMITRGL 495
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F M + + + ++N L+ K +F E I P++ TYN +I
Sbjct: 273 AKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM-HCRKIIPNVVTYNSLI 331
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+S S A ++ EM + P+ ++ +L+ K + +L ++ G++
Sbjct: 332 DGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQ 391
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y + I+ LCK + +A+ + +++L KG N TY+ I+ FC +G F EA
Sbjct: 392 PNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAM 451
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
M +G PN+ Y ++ + + + A E I +G +
Sbjct: 452 LSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 496
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N ++ FC+ + A S+ + + ++P+ SF L+ G+ K ++ ++ M
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G++ V Y+V I+ LCK K EA L DEML +G+ PN VT++ I G CK+G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A + Y+ M + G SP+ Y T++Y +CK GD A E KG P+ T +L+
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318
Query: 364 TG 365
G
Sbjct: 319 DG 320
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+KE+ E + S+ FN L+ + + + VF K +G++P + ++N ++ +
Sbjct: 124 YKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITK-WGLRPSVVSFNTLMNGYI 182
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGV 251
+ D + + + M ++P+ ++ L+ G KE K ++ +K+ +M++R + +GV
Sbjct: 183 KLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGV 242
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ + I CK K A + +MLS+G P+ +TY+ IYG CK G+ +AK
Sbjct: 243 T-FTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDE 301
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL P+ Y T++ CK GD ETA + K I + + + +L++GL +
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGR 361
Query: 372 VSEAKELI 379
+A++++
Sbjct: 362 SVDAEKML 369
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 155 AQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLI 213
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A+ + EM + + PN +F L+ G K K + ++ + M G
Sbjct: 214 NGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFS 273
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
YN I+ LCK +AK L DEM KG+KP+ +TY+ I G CK+G+ E
Sbjct: 274 PDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y +++ CK
Sbjct: 334 RKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCK 393
Query: 334 GGDYETALGFCKESIAKGWVPNFTT 358
GD + KE G VP T
Sbjct: 394 NGDVKMGSKLLKEMQRDGHVPCVIT 418
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A+ + P D +S+ IN L + + + + +E+ R + N I + +
Sbjct: 199 ASGVQP----DVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKN 254
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
+ A+ +K+M +N L+ L D + K + E G+KPD T
Sbjct: 255 GKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK-GLKPDKIT 313
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ D +A+ M +++I+ + S+ AL++G KE + D K+L+ M
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREML 373
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
G+K Y + +H CK LL EM G P +T
Sbjct: 374 SVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L + +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEA 375
T +L+ G + A
Sbjct: 318 FTYTTLIDGCCKEGDLDTA 336
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLL 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ + A K
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKH 339
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ M + + Y ++ +C+ G A +E ++ G P+ T ++
Sbjct: 340 RKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCK 399
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
V + +L+ + + +V T+N + G
Sbjct: 400 KGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ F K+ V + ++G++ V YN ++ +L E L ML
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ G++P+ TYS I G CK+ ++A + + M GL PN + T++ CK G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVD 264
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
A+ K +++ +P+ T +L+ GL + +A LI GL +KFT
Sbjct: 265 LAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFT 319
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFY+E +L+ G + + +N+ +H CK A+++ D + G
Sbjct: 125 LVWGFYEE--------ILEC----GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+Y+ + G+ + G+ +E + M SG+ P+ Y ++ +CK + A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
E + KG +PN T +L+ G +V A E+ ++ + ++ T+N + GL
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGL 292
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 140/323 (43%), Gaps = 2/323 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ + L + + + + E+ + +E + Q + + A++
Sbjct: 266 DAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVV 325
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M EH + ++++L L + + K+YG KPD Y V+K C
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCS 384
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A ++AEM P+ +F ++A ++ + KV++ M G +
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I LC R +A LL + S G KP+ VT++ + G C +E+A++ M
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+S P+++ + T++ +C+ G A+ K G +PN +T +V L A K
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564
Query: 374 EAKELIGLVKEKFTKNVDTWNEI 396
EA +L+ + T ++ T+N +
Sbjct: 565 EALKLLSGMTNG-TPDLITYNTV 586
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 4/289 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+SI+L +A+ A+ EM + +N L+ A+ D E + + P
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLP 259
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
++G KPD TY V+K+ C S + AEM P+ +F +V ++
Sbjct: 260 -SHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLV 318
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ KV+ M +G + Y+ + LC + + +A LL + S G KP+++ Y+
Sbjct: 319 DRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTV 378
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G C +E A++ M S P+ + T++ +C+ G + A+ ++ G
Sbjct: 379 LKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGC 438
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
P+ T S++ GL + +A EL+ ++ K ++ T+N + GL
Sbjct: 439 NPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F +M SV ++ LL A A Y++ V ++ + G +PD+ TYN +I
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM-VLLDEMRAKGCEPDIVTYNVLI 239
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
A C D A +IL+++ KP+A ++ ++ E++++V ++ M
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N + SLC+ A ++D M G P+ VTYS + G C G ++A +
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + G P++ Y T++ +C +E A E + P+ T +++ L
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
V A +++ + E ++ T+N I GL
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 139/314 (44%), Gaps = 19/314 (6%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQAN--MTEH 128
D + F+ I L + + + +E++ PD+ ++ I+ G N +
Sbjct: 406 DEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT-----YNSIIDGLCNERCIDD 460
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ + + + + FN LL L +++ +++ + + PD T+N VI
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS-DCPPDATTFNTVI 519
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C+ A L M PN S++ +V K K ++ K+L GM
Sbjct: 520 TSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS-----GMT 574
Query: 249 SGVS---MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+G YN I ++ K K EA LL M+S G+ P+++TY YG C++ + A
Sbjct: 575 NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRA 634
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + + GLSP+++ Y ++ C+ + A+ ++ G +P+ +T L+
Sbjct: 635 IRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEA 694
Query: 366 LAGASKVSEAKELI 379
LA + EAK+L+
Sbjct: 695 LAYECLLDEAKQLL 708
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +N ++ A ++ +R+ P PD T+N +I+A C A ++
Sbjct: 129 TVVTYNTMVNGYCRAGRIEDARRLISGMP----FPPDTFTFNPLIRALCVRGRVPDALAV 184
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+M + P+ ++ L+ K Y +L M G + + YNV I+++C
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCN 244
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
EA +L ++ S G KP++VTY+ + C ++E ++ + M+++ +P+
Sbjct: 245 EGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVT 304
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
+ T+V +C+ G + A+ G +P+ T S++ GL +V +A EL+ +K
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q + A+ T K M E+ + +N ++ AL A +E ++ T G PDL
Sbjct: 524 QKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM--TNG-TPDL 580
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN VI ++ A +L M + P+ ++ +L G +E+ + ++L
Sbjct: 581 ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
++ G+ + YN + C+ + A M+S G P+ TY + +
Sbjct: 641 LQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECL 700
Query: 302 FEEAKKFYRIMSNSGL 317
+EAK+ + + G+
Sbjct: 701 LDEAKQLLVNLCSLGV 716
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N A+ +M+E R V +N ++ + +F + G++
Sbjct: 90 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRA 148
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++ C S S A ++ +M + I PN +F A++ F KE K+ + K+
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + V YN I+ LC + EAK +LD M++KG P+ VTY+ I GFCK
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+E K +R M+ GL ++ Y T++ + G + A ++ PN T
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 325
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ GL +V +A L + K + ++ T+N + G+
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 7/282 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ + F M+ + H + ++N ++ L + V + K +G +PD+ T +
Sbjct: 27 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK-FGYEPDVVTVSS 85
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC+ + A ++++M+ +P+ + ++ G K D ++ MER G
Sbjct: 86 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 145
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+++ YN + LC + ++A L+ +M+ + + PN +T++ I F K+G F EA
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 205
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
K Y M+ + P+ Y +++ +C G + A + KG +P+ T +L+ G
Sbjct: 206 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 265
Query: 367 AGASKVSEAKELI------GLVKEKFTKNVDTWNEIEAGLPQ 402
+ +V E +L GLV + T N +AG P
Sbjct: 266 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 2/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ F+ +L + +K+Y V +F + GI DL +YN VI C S A S+
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLF-HHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+ +M + +P+ + +L+ GF + + D ++ ME G + V +YN I CK
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +A L D M G++ ++VTY+ + G C G + +A + R M + PN
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-V 382
+ ++ K G + A+ +E + P+ T SL+ GL +V EAK+++ L V
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ +V T+N + G
Sbjct: 248 TKGCLPDVVTYNTLINGF 265
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 43/331 (12%)
Query: 74 DRLAFSIAINKLSEAN-YFNGISQY--LEELKTRPDLQNERFHAHSIILYG--QANMTEH 128
D + S IN + N F+ I +EE+ RPD+ ++ I+ G + +
Sbjct: 79 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV-----IYNTIIDGSCKIGLVND 133
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F M+ +R +N+L+ L + + + R+ + I P++ T+ VI
Sbjct: 134 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVI 192
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F + S A + EM R+ + P+ ++ +L+ G + ++ ++L +M G
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM-------------------------- 282
V YN I+ CK ++ E L EM +G+
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 312
Query: 283 ------KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+PN TYS +YG C + E+A + M S + + + Y +++ MCK G+
Sbjct: 313 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 372
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
E A + KG P+ + ++++G
Sbjct: 373 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 125/265 (47%), Gaps = 4/265 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ + L + ++ ++ + ++ R + N I ++ + A++ +
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + V +N+L+ L + E K++ ++ T G PD+ TYN +I FC+
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM-LDLMVTKGCLPDVVTYNTLINGFCK 267
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + EM ++ + + ++ ++ G+++ + + ++ M+ + +
Sbjct: 268 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRT 324
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y++ ++ LC + +A L + M ++ + TY+ I+G CK GN E+A +R +S
Sbjct: 325 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 384
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYE 338
GL P+ Y TM+ C+ ++
Sbjct: 385 CKGLKPDVVSYTTMISGFCRKRQWD 409
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ I+ + F+ + EE+ R PD+ + + ++G+ + A +
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV---DEAKQM 242
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M V +N L+ +K E ++F E + G+ D TYN +I+ +
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYF 301
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
++ +A I + MD + PN ++ L+ G + E + + M++ ++ ++
Sbjct: 302 QAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ IH +CK+ +A L + KG+KP+ V+Y+ I GFC+ ++++ YR M
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 418
Query: 313 SNSGLSP 319
GL P
Sbjct: 419 QEDGLLP 425
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ F +++ K + Y+ V + ME G+ + YN+ I+ LC+ + A ++
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+ +M+ G +P+ VT S I GFC+ +A M G P+ +Y T++ CK
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDT 392
G A+ G + T SLV GL + + S+A L+ +V NV T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 393 WNEI 396
+ +
Sbjct: 188 FTAV 191
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ V +S + K N++ + M G+ + Y ++ +C+ + AL
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+ + G+ P+ T+ SL+ G ++V +A +L+ ++E F +V +N I G
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 4/330 (1%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
L++++++ IN + + G + L ++ R N ++ I + + A
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP-KTYGIKPDLDTYNRVIKA 190
F EM + V ++ L+ I KE + E KT I P++ TYN ++ A
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT--INPNVYTYNILVDA 278
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A S+LA M + +KP+ ++ L+ G++ + + V M G+
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V Y + I+ CK + EA L EM K M P VTYS I G CK G
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + G + Y +++ +CK G + A+ + + PN T L+ GL
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458
Query: 371 KVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
++ +A+E+ L+ + + NV T+N + G
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMING 488
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 11/283 (3%)
Query: 114 AHSIILYG---QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
+S ++YG + + E A+ EM + +V +N L+ AL KE K V
Sbjct: 236 TYSTLIYGFCIEGKLKE-AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K +KPD+ TY+ ++ + + A + M + P+ ++ L+ GF K +
Sbjct: 295 MLKA-CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
++ + + M + M G+ Y+ I LCK + L+DEM +G + +TYS
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYS 413
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I G CK+G+ + A + M + + PN + ++ +CKGG + A ++ + K
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
G+ N T ++ G + EA ++ G + FT
Sbjct: 474 GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TY +I FC++ A ++ EM +K++ P ++ +L+ G K + V
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + V Y+ I LCK A AL ++M + ++PN T++ + G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A++ ++ + G N Y M+ CK G E AL + G +PN
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T ++++ L + +A++L+
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLL 537
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL T N +I FC + +S+LA++ ++ P+ + L+ G + + V
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQ---V 145
Query: 236 NKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
K L ++ G + Y I+ +CK+ A LL ++ + KPN YS
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 205
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I CK EA + M+ G+S + Y T++Y C G + A+G E + K
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
PN T LV L KV EAK ++ ++ + K +V T++ + G
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + +N+++ +F + S+A S+ ++ K I+P+ + L+ F + V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L + + G N I LC + +A D++L++G + N V+Y+ I G CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G+ A K R + PN +Y T++ +CK A G E KG + T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK----NVDTWN 394
+L+ G K+ EA IGL+ E K NV T+N
Sbjct: 237 YSTLIYGFCIEGKLKEA---IGLLNEMVLKTINPNVYTYN 273
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 113 HAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H ++I++ G + M + A+ FKEM + + + +++L+ L + V + E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G D+ TY+ +I C++ A ++ +M + I+PN +F L+ G K
Sbjct: 400 M-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ +D +V Q + G V YNV I+ CK EA +L +M G PN+ T+
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFE 518
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I K ++A+K R M GL
Sbjct: 519 TIIIALFKKDENDKAEKLLRQMIARGL 545
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 4/283 (1%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGI 177
++ + M E A + F M ++ + NA L L AK K ++ F GI
Sbjct: 191 VFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRL--AKTGKGDLSNKFFRDMVGAGI 248
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+ TYN +I C+ D +A S+ +M + + P+ ++ +L+ G+ K ++
Sbjct: 249 AQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFC 308
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ + M+ G + V YN I+ CK + +A L EM + G+KPN VTYS I C
Sbjct: 309 LFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALC 368
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K+ ++A KF M GLSPN Y +++ CK G AL E + N
Sbjct: 369 KEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVV 428
Query: 358 TMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
T +L+ GL ++ EA++L ++K T N+ T+ + G
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHG 471
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F +M + L + +N+L+ E +F E K G +PD+ TYN +I FC
Sbjct: 275 FHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM-KDVGCEPDVITYNALINCFC 333
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A+ L EM +KPN ++ L+ KE + K L M R G+
Sbjct: 334 KYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I + CK ++A L DEML + N VTY+ + G CK+G EA+ +R M
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM 453
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+G++PN Y +V+ K E AL KE K P+ +++ GL +K+
Sbjct: 454 IKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKL 513
Query: 373 SEAK 376
E +
Sbjct: 514 EECE 517
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 1/243 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F++M + SV +N ++ + D K +F + K G+ PD+ TYN +I +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQM-KQMGLTPDIVTYNSLIDGYG 298
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ ++ + EM +P+ ++ AL+ F K E+ L M+ G+K V
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ I +LCK +A L +M G+ PN TY+ I CK G +A K M
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
+ N Y T++ +CK G A + I G PN T +LV G +V
Sbjct: 419 LQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRV 478
Query: 373 SEA 375
A
Sbjct: 479 ENA 481
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 2/291 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S I+ L + + ++L +++ NE + I +A A++ E
Sbjct: 358 VTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADE 417
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + ++ +V + LL L E + +F K G+ P+L TY ++ ++
Sbjct: 418 MLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKA-GVTPNLKTYTALVHGHIKNK 476
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+A +L E+ K IKP+ +G ++ G + K E+ V+ M+ G+++ +Y
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+R+ + K K EA LL EM G++ VT+ I G CK G EEA ++ M++
Sbjct: 537 IRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADF 596
Query: 316 GLSPNS-SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
L PN+ +V ++ +CK E A E K VP+ +L+ G
Sbjct: 597 NLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 6/215 (2%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P ++ + F E A + M R + P A S A + K K + NK
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M G+ V YN+ I +CK AK+L +M G+ P+ VTY+ I G+ K
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G +E+ + M + G P+ Y ++ CK A F E G PN T
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359
Query: 359 MKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
+L+ L + +A + +GL +FT
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFT 394
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 109/293 (37%), Gaps = 40/293 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGI 177
YG+ + + + F+EM + V +NAL+ Y+++ + F + K G+
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC---KYEQMPKAFHFLHEMKNSGL 353
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP++ TY+ +I A C+ A L +M R + PN ++ +L+ K D K
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF----- 292
+ M + + V Y + LCK + EA+ L M+ G+ PN TY+
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473
Query: 293 ------------------------------IYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
I+G C EE + M G+ NS
Sbjct: 474 KNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSV 533
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+Y + K G AL +E G T L+ GL V EA
Sbjct: 534 IYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEA 586
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI+ + Y + A+ ++ + A ++L EM ++ +F L+ G K+
Sbjct: 524 KACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLV 583
Query: 233 EDVNKVLQMMERYGMK-SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
E+ M + ++ + V++ I LCK AK L DEM K M P+ + Y+
Sbjct: 584 EEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTA 643
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G K +F+EA MS G+ + Y ++V+ + +G + A F E I KG
Sbjct: 644 LIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKG 703
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKEL 378
VP+ L+ + EA EL
Sbjct: 704 IVPDEILCIRLLRKYYELGSIDEAIEL 730
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
LRH F +LL E K V ++ K G +PD+ YN ++ + ++ A
Sbjct: 246 LRH----FTSLLYGWCREGKIMEAKHVLVQI-KEAGFEPDIVVYNNLLGGYAQAGKMRDA 300
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ +LAEM + + PNA+SF L+ F K EK ++ ++ M+ G ++ V Y I
Sbjct: 301 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 360
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
CK +A +LD+M+ KG P+ ++Y + K EE + M G P+
Sbjct: 361 FCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 420
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++Y TM+ +CK GD + A+ E A G P T +V G + EA
Sbjct: 421 LNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEA 475
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 35/276 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA A EM + + +F L+ + + E R+F E + G +
Sbjct: 291 YAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGS-GCEA 349
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY +I FC+ ++ AY IL +M +K P+ S+ ++ K+E+ E+ +++
Sbjct: 350 DVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELI 409
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + G +++YN I +CKL EA L EM + G+ P TY ++GF
Sbjct: 410 EEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 469
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA +++ M GL P + T+
Sbjct: 470 GCLVEACDYFKEMVERGLLS---------------------------------APQYGTL 496
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWN 394
K L L A K+ AK + + K + NV W
Sbjct: 497 KELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWT 532
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +Y I +L K+R+ AL++EM + P +T FI + +
Sbjct: 136 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMV 193
Query: 306 KKFYRI---MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
KK + M G P+ V+ ++ +CK G + A E + + PN SL
Sbjct: 194 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF-EDMRVRFNPNLRHFTSL 252
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+ G K+ EAK ++ +KE F ++ +N + G Q
Sbjct: 253 LYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 293
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I G+A + V F + R ++NA+L +L K YK + V+ + + G
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLED-G 252
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD+ TYN V+ A + Y +L EM + P+ ++ L+ K
Sbjct: 253 FSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+L M G++ GV + + L + K K +DEM+ G P+ V Y+ I G+
Sbjct: 313 NLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGY 372
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G E+A++ ++ M+ G PN Y +M+ C G ++ A KE ++G PNF
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNF 432
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+LV L A KV EA E++ + EK
Sbjct: 433 VVYSTLVNNLRNAGKVLEAHEIVKDMVEK 461
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 3/249 (1%)
Query: 113 HAHSIILYGQANMTEHAV--RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H+++ IL+ + ++ + +++M E V +N ++ A + R+ E
Sbjct: 223 HSYNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDE 282
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G PDL TYN ++ + +A ++L M ++P F LV G +
Sbjct: 283 MVKD-GFSPDLYTYNILLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLVDGLSRAG 341
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K E + M + G V Y V I + +A+ + EM KG PN TY+
Sbjct: 342 KLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYN 401
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I GFC G F+EA + M + G +PN VY T+V + G A K+ + K
Sbjct: 402 SMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEK 461
Query: 351 GWVPNFTTM 359
G + +M
Sbjct: 462 GHYVHLISM 470
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%)
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E R IE G P++ YN +I +C+ D A + E+ K P ++GA+
Sbjct: 202 EEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAI 261
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ GF K+ ++ ++++L M G+ V +YN I + K +A ++ M+ G
Sbjct: 262 INGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGC 321
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KP+ VTY+ I G C+DG EA + GL PN Y +++ CK G Y+ A
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ E +G P+ T +LV GL A +V A
Sbjct: 382 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA 414
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ D + +FIE K G P ++TY +I FC+ D + +L EM
Sbjct: 223 YNTLIDGYCKKGDMEMANGLFIEL-KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM 281
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + + N + ++ YK + ++ M G K + YN I C+ K
Sbjct: 282 NSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKV 341
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+EA LL++ L KG+ PN +Y+ I+ +CK G ++ A + M+ G P+ Y +
Sbjct: 342 SEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGAL 401
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
V+ + G+ + AL ++ + +G P+ L++GL K+ AK L+
Sbjct: 402 VHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLL 453
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 2/314 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+ IN + F I + L E+ +R N + + I + AV T + M
Sbjct: 258 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 317
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E + + +N L+ E ++ +E G+ P+ +Y +I A+C+
Sbjct: 318 ECGCKPDIVTYNTLISGSCRDGKVSEADQL-LEQALGKGLMPNKFSYTPLIHAYCKQGGY 376
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A + L EM + KP+ ++GALV G + + + + M G+ +YN+
Sbjct: 377 DRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNIL 436
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ LCK K AK LL EML + + P++ Y+ + GF ++GN +EA+K + + G+
Sbjct: 437 MSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGM 496
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P Y M+ CK G + A+ + P+ T +++ G + A++
Sbjct: 497 NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQK 556
Query: 378 LI-GLVKEKFTKNV 390
+ +VK K NV
Sbjct: 557 MFREMVKMKCKPNV 570
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 7/214 (3%)
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA-LVAGFYKEEKYEDVNKVL 239
L+ Y V+K + D + S+L + + A F +V G KE K E+ K++
Sbjct: 149 LELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLI 208
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G + YN I CK A L E+ KG P TY I GFCK
Sbjct: 209 EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKK 268
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+F+ + M++ GL+ N VY T++ K G A+ + I G P+ T
Sbjct: 269 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 328
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L++G KVSEA +L+ GL+ KF+
Sbjct: 329 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 362
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 175/398 (43%), Gaps = 47/398 (11%)
Query: 26 SILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL 85
SI+ G K L + AALT+ K + I+ + P D + F+ IN
Sbjct: 97 SIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEP----DSIFFNAVINAF 152
Query: 86 SEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK-LRHS 144
SE+ +Y ++K I YG A E + + + M + + +R +
Sbjct: 153 SESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPN 212
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
+ +N L+ A K+ + V + + G++PD TYN + A+ ++ ++S A I+
Sbjct: 213 LRTYNVLVRAWCNKKNIMKAWNVVYKMVAS-GLQPDAVTYNTIATAYAQNGEASQAEGII 271
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYED------------------------------ 234
EM +++PN + ++ G+ KE K ++
Sbjct: 272 LEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 235 -----VNKVLQMMERYGMKSGVSMYNVRIHSLCK---LRKCAEAKALLDEMLSKGMKPNS 286
VN+VL +ME +G+K V ++ +++ + KC E + D+M+ ++P++
Sbjct: 332 VDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCRE---IFDDMVKARIQPDA 388
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
YS G+ + G E+A++ M SG PN ++ T++ C G E A+ ++
Sbjct: 389 HVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEK 448
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G PN T ++L+ G A + +++E++ +++E
Sbjct: 449 MCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
Query: 64 AAALTPES-HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
A+ L P++ + +A + A N EA+ GI ++ +P NER I Y +
Sbjct: 241 ASGLQPDAVTYNTIATAYAQN--GEASQAEGIILEMQNSNVQP---NERTCCIIIGGYCK 295
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ A++ M + L+ ++ FN+L+ A D V V + +G+KPD+
Sbjct: 296 EGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT-LMEEFGVKPDVI 354
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T++ ++ A+ + I +M + I+P+A + L G+ + + E ++L M
Sbjct: 355 TFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM 414
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G V ++ I+ C + A + ++M G+ PN T+ I+G+ +
Sbjct: 415 IKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQP 474
Query: 303 EEAKKFYRIMSNSGLSPNSSVYF 325
++++ +IM + P +
Sbjct: 475 WKSEEVLQIMEEFNVQPEKTTLL 497
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ E SIL + KP+ ++ L+A ++ ++ ++ ++ +E
Sbjct: 77 KLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEEN 136
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
GM+ +N I++ + EA +M G KP + T++ I G+ G EE+
Sbjct: 137 GMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEES 196
Query: 306 KKFYRIMS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+K +MS + + PN Y +V C + A + +A G P+ T ++ T
Sbjct: 197 QKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNV 390
A + S+A+ G++ E NV
Sbjct: 257 AYAQNGEASQAE---GIILEMQNSNV 279
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E ++ V F+ ++ A + A + + +F + K I+PD Y+ + K + +
Sbjct: 344 MEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKAR-IQPDAHVYSILAKGYVRAG 402
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A IL M + PN F ++ G+ + E K+ + M G+ + +
Sbjct: 403 EPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFE 462
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + R+ +++ +L M ++P T + G +EA + + N
Sbjct: 463 TLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNE 522
Query: 316 GLS 318
++
Sbjct: 523 EMT 525
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 11/284 (3%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDL 181
N+ A+ ++ M E+ +R +V +N +L + EV+R PK G P
Sbjct: 216 NLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGG---EVQRALDLVPKMQERGCYPSE 272
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N +I + + A ++ EM + ++ + ++ L+ G+ K+ + + +
Sbjct: 273 VTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ V+ +N ++ CK K ++A+ L +ML K + P+ ++Y+ IYGFC+ GN
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + LS N Y T++ +C+ GD ETAL ++ I +G P+ T
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452
Query: 362 LVTGLAGASKVSEAKEL------IGLVKEKFTKNVDTWNEIEAG 399
LV G + AKE +GL ++F E++ G
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLG 496
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A +EM + LR S +N L+ E ++ E T G+ P + ++N
Sbjct: 289 QQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM-VTRGVSPTVASHNT 347
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ FC+ S A L++M +K++ P+ S+ L+ GF + + +L +
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + YN I LC+L A L ++M+++G+ P+ VTY+ + G CK GN AK
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F+ M + GL+P+ Y + K GD A +E + KG+ P+ T V GL
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527
Query: 367 AGASKVSEAKELI 379
+ EA EL+
Sbjct: 528 CKLGNLEEAGELL 540
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 8/325 (2%)
Query: 60 EICRAAALTPE-----SHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHA 114
E+ RA L P+ + + F++ IN LS+ ++E+ + L+ +
Sbjct: 252 EVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM-AKAGLRVSPYTY 310
Query: 115 HSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
+ +I Y + + A+ ++EM + +V + N ++ + ++ + K
Sbjct: 311 NPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLK 370
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ PD+ +YN +I FC + A+ +L E+ +++ N ++ L+ G + E
Sbjct: 371 K-NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
K+ + M G+ V Y V ++ CKL AK DEML G+ P+ Y+ I
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARI 489
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
G K G+ +A K M G P+ Y V +CK G+ E A ++ I G V
Sbjct: 490 VGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV 549
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL 378
P+ T S + + E +E+
Sbjct: 550 PDHVTYTSFMHAHMENGHLREGREI 574
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 11/278 (3%)
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRH---SVGAFNALLLALTIAKDYKEVKRVFIE 170
+++ ++YG + F +DE + R+ ++ +N L+ L D + ++ E
Sbjct: 379 SYNTLIYGFCRLGNIG-EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKL-KE 436
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
GI PD+ TY ++ C+ + A EM + P+ ++ A + G E
Sbjct: 437 DMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG---EL 493
Query: 231 KYEDVNKVLQMMERY---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K D K ++ E G V YNV ++ LCKL EA LL +M+ G P+ V
Sbjct: 494 KLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHV 553
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ F++ ++G+ E ++ + M + G +P Y +++ G + A+ + E
Sbjct: 554 TYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM 613
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
KG VPN T L+ G K+ +A + ++EK
Sbjct: 614 QEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK 651
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ NR++K + + A + M I+P +++ ++ F K + + +
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ M+ G +NV I+ L K + +AK L+ EM G++ + TY+ I G+CK
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA + M G+SP + + T++Y CK G A + + K +P+ +
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379
Query: 359 MKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+L+ G + EA L+ ++ + N+ T+N + GL
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGL 422
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 13/321 (4%)
Query: 73 LDRLAF-SIAINKLSEANYFNGISQY--LEE-LKTRPDLQNERFH----AHSIILYGQAN 124
LD L F +++ N ++ +G+ + LE LK + D+ N H +++++ G
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459
Query: 125 MTEH--AVRTFKEMDEHKLRHSVGAFNALLLA-LTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ A F EM L A+ A ++ L + K K E T G PD+
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFK--LQEEMLTKGFPPDV 517
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN + C+ + A +L +M R P+ ++ + + + + ++
Sbjct: 518 ITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYD 577
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V Y V IH+ + A A EM KG+ PN +TY+ I GFCK
Sbjct: 578 MLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRK 637
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
++A KF+ M G+ PN Y ++ C G ++ AL + + K P+ T +
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGA 697
Query: 362 LVTGLAGASKVSEAKELIGLV 382
L+ L KV + + L+
Sbjct: 698 LLKKLDKDYKVQAVQFIESLI 718
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 6/277 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + A + + M + + +N L L A E R+ E + + P
Sbjct: 284 YARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLP 343
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN + A + SS A +L EM K +K + ++ G K+ + E L
Sbjct: 344 DVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCL 403
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ V YN IH+ CK A+A L+DEM+ +G+K ++ T + +Y CK+
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE 463
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+EEA+ + G P+ Y T++ K + E AL E I K P+ +T
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523
Query: 360 KSLVTGLAGASKVSEA----KELI--GLVKEKFTKNV 390
+L+ GL+ ++ EA EL+ GLV + T N+
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 10/286 (3%)
Query: 105 PDL--QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
PD+ N HAH +A A EM L+ N +L L K Y+
Sbjct: 413 PDVITYNTLIHAHC-----KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYE 467
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
E + ++ P G PD +Y V+ A+ + +S A + EM K + P+ S++ L
Sbjct: 468 EAQG-LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTL 526
Query: 223 VAGFYKEEKY-EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
+ G + + E ++K+ ++ME+ G+ + YN+ IH+ CK A ++M+
Sbjct: 527 IKGLSRMGRLKEAIDKLNELMEK-GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
KP+ VT + + G C +G ++A K + G + Y T++ MCK GD +TAL
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTAL 645
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT 387
F + A+G P+ T +++ L+ A + EA+ ++ + E T
Sbjct: 646 HFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT 691
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ TYN +I A C++ + + AY+++ EM R+ +K + + ++ KE++YE+
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+LQ + G Y + + K A L DEM+ K + P+ TY+ I G
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKG 529
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G +EA + GL P+ + Y +++ CK GD E A F + + + P+
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
T +L+ GL K+ +A +L EK K +V T+N +
Sbjct: 590 VVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTL 631
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 36/241 (14%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G+ PD TYN ++ A C A ++LA M + + P ++ LV+ + + +
Sbjct: 233 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQ 292
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLC-------------------------------- 262
KV++ M G + + YNV LC
Sbjct: 293 ATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLA 352
Query: 263 ----KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
K R ++A LL+EM KG+K VT++ I G CKDG E A M++ GL+
Sbjct: 353 DACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLA 412
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ Y T+++ CK G+ A E + +G + T+ +++ L + EA+ L
Sbjct: 413 PDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGL 472
Query: 379 I 379
+
Sbjct: 473 L 473
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 137/328 (41%), Gaps = 15/328 (4%)
Query: 75 RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFK 134
RL + K+ EA NG PDL A + QA + A R
Sbjct: 286 RLGWIKQATKVVEAMTANGF---------EPDLWTYNVLAAGLC---QAGKVDEAFRLKD 333
Query: 135 EMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM+ L V +N L A + + R+ E + G+K L T+N VIK C+
Sbjct: 334 EMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEM-REKGVKATLVTHNIVIKGLCK 392
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A L +M + P+ ++ L+ K ++ M R G+K
Sbjct: 393 DGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFT 452
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
N +++LCK ++ EA+ LL +G P+ V+Y + + K+ N E A + + M
Sbjct: 453 LNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMI 512
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
L+P+ S Y T++ + + G + A+ E + KG VP+ TT ++ +
Sbjct: 513 EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLE 572
Query: 374 EAKELIG-LVKEKFTKNVDTWNEIEAGL 400
A + +V+ F +V T N + GL
Sbjct: 573 NAFQFHNKMVENSFKPDVVTCNTLMNGL 600
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 4/228 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK--PNASSFGALVAGFYKEEKYED 234
++P L N V+ A S +S S+ A +++ PN +F LV + D
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
L M+ +G+ YN +++ C+ EA+ALL M G+ P TY+ +
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG-WV 353
+ + G ++A K M+ +G P+ Y + +C+ G + A E G +
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
P+ T +L S+A L+ ++EK K + T N + GL
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGL 390
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E+A + +M E+ + V N L+ L + + ++F + + G K D+ TYN
Sbjct: 572 ENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEK-GKKVDVITYNT 630
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ C+ D +A A+M+ + ++P+A ++ +++ + + E+ +L + G
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690
Query: 247 -MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ S ++ S+ + +AK +E + S Y+ + G C G F+EA
Sbjct: 691 TLSQSFSSPLLKPSSVDEAESGKDAKT-EEETVENPQDSASEAYTKLVNGLCTSGQFKEA 749
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
K M G+S +SS Y T++ + K
Sbjct: 750 KAILDEMMQKGMSVDSSTYITLMEGLVK 777
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 6/333 (1%)
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
L P + + ++ IN +A + + L+E+K R + H+ I +
Sbjct: 103 LEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRI 162
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY----GIKPDLD 182
+ A+ FK M E + +V +N ++ L A E +F + K Y G +PD+
Sbjct: 163 DEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVI 221
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+Y+ VI A C++ AY M PN ++ +L+ G K ++ + ++L M
Sbjct: 222 SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHM 281
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G + +N +H+L K + +A + +L G KPN VTY+ ++G CK G
Sbjct: 282 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRV 341
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA + M S ++P+ Y +++ CK G + A + +P+ T +L
Sbjct: 342 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 401
Query: 363 VTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWN 394
+ G + K EA + +V F + T+N
Sbjct: 402 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 434
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 4/278 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A + F+ + + + +V +N + L A E R+ +E ++ + PD+ TY+
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVES-KVTPDVITYSS 365
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC++ A + M P+ +F L+ GF + +K + +V + M G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
G+ YNV + +C A + +M K +P+ TY+ I C+ +EAK
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F +M + PN ++ +V +CK G+ + A + G P T K LV L
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Query: 367 AGASKVSEAKELI---GLVKEKFTKNVDTWNEIEAGLP 401
K A +L+ G V + T ++ +AG P
Sbjct: 546 YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKP 583
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 4/248 (1%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
A+ E A+ + +M K + + L+ L A+ E K F++ + + P+
Sbjct: 443 ADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKE-FLDVMEADNVVPNGA 501
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+ +++ C+ + A S+L + +P +F LV Y +K+E +K+L+
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR-- 559
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G + + Y++ + +CK K EA ++++M+ KG++P+ TY + C
Sbjct: 560 -SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
E A + M++ G +P Y ++ C + A + +A G+ P TM++L
Sbjct: 619 ESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
Query: 363 VTGLAGAS 370
+ L A
Sbjct: 679 SSCLRDAG 686
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ AF ++ A+ +L E PN + ++ GF K + + ++L M+ G
Sbjct: 82 LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG--MKPNSVTYSHFIYGFCKDGNFEE 304
+K V +++ I LC+ + EA L++ S G PN +TY+ + G CK +E
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEA---LEQFKSMGEECSPNVITYNTVVNGLCKANRIDE 198
Query: 305 AKKFY-----RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
A + + R ++ G P+ Y T++ +CK + A + K A G PN T
Sbjct: 199 ALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
SL+ GL + SE EL+ +KEK F N+ +N
Sbjct: 259 SSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFN 294
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 143/361 (39%), Gaps = 40/361 (11%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +++A++ L +A + + L E+ K PD+ ++ I + +A + A
Sbjct: 326 VTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT---YSSIIDGFCKAGRMDKADDV 382
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F M H+ F LL + K +E RV + G P L TYN ++ C
Sbjct: 383 FTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA-GFIPGLQTYNVLMDCVC 441
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ SA I +M RK +P+ +++ L+ + + ++ + L +ME + +
Sbjct: 442 GADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP---------------------------- 284
+ + + LCK + EA ++LD ++ G +P
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSP 561
Query: 285 ----NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
++ TYS + CK G +EA + M G+ P+ Y ++ +C E+A
Sbjct: 562 GFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
+ ++ ++G P T L+ A EA + +V FT T + +
Sbjct: 622 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681
Query: 400 L 400
L
Sbjct: 682 L 682
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 223 VAGFYKEEKYEDVNKVLQMME--------------RYGMKSGVSMYNVRIHSLCKLRKCA 268
+AG+ E +VLQ +E + G + V +++ K ++
Sbjct: 34 LAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHE 93
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA LL E L PN + Y+ I GFCK G ++A + M G+ + ++ T++
Sbjct: 94 EAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLI 153
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+C+ G + AL K S+ + PN T ++V GL A+++ EA EL +++++
Sbjct: 154 QGLCRKGRIDEALEQFK-SMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRY 210
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G + N+ T + + F K EEA + + PN +Y T++ CK G + A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
E +G + +L+ GL ++ EA E + E+ + NV T+N + GL
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGL 190
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ + A + FKEM L + AL+ L A + V+ + G PD
Sbjct: 246 GKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM-TSQGCVPD 304
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ T + +I C++ +A I M+ + + PN + AL+ G K K + ++L
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M++ YN+ I LCK A+A DEML G KP+ TY+ + GFCK G
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
N + A + MS+S SPN Y T++ +CK A + + +G P+
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYS 484
Query: 361 SLVTGLAGASKV 372
SLV GL + K+
Sbjct: 485 SLVDGLCKSGKL 496
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 36/292 (12%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V +N L+ +A++ +E V E + YG+ P L T+N V+ C+S +A
Sbjct: 94 VETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHF 153
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
+ ++ A+V K +K +D +++ + G ++ YN ++ LCK+
Sbjct: 154 ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKM 213
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD------------------------- 299
+ EA LL +++ G P+ VTY+ I G K+
Sbjct: 214 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCY 273
Query: 300 ----------GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
G +A Y+ M++ G P+ TM+ +CK G A+ K A
Sbjct: 274 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 333
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF-TKNVDTWNEIEAGL 400
+G PN +L+ GL A K+ A E++ +K+ F T + T+N + GL
Sbjct: 334 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 6/277 (2%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA A +K M V + ++ L A R+F + G+ P+
Sbjct: 282 QAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM-EARGLAPNE 340
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
Y+ +I C++ A +LA+M + P+ ++ L+ G K E
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G K V YN+ + CK A + D+M S PN VTY I G CK
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK--ESIAKGWVPNFTTM 359
+A +++ M G P+S VY ++V +CK G E G C + + + V N T
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE---GGCMLFDEMERSGVANSQTR 517
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
L+ L A++V EA L ++++ + +N I
Sbjct: 518 TRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSI 554
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A+ +++ ++ V + +L+ L K E ++F E G+ D Y
Sbjct: 217 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM-ALRGLVLDTVCYTA 275
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ A S+ M + P+ + ++ G K + ++ + ME G
Sbjct: 276 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 335
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ IH LCK RK A +L +M P+++TY+ I G CK G+ E A+
Sbjct: 336 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 395
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
F+ M +G P+ Y +V CK G+ + A G + + PN T +L++GL
Sbjct: 396 AFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGL 455
Query: 367 AGASKVSEAKELIGLVKEK 385
++++A +KE+
Sbjct: 456 CKRRQLTKASLYFQHMKER 474
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 9/312 (2%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
F I + E+ P L+ H+++L+G ++ A+ F+ + + +
Sbjct: 114 FAVIREMEEDYGVAPSLKT-----HNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTY 168
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
A++ L K ++ +E G P + TYN ++ C+ A +L ++
Sbjct: 169 TAIVDWLAKNKKIQDAV-ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
P+ ++ +L+ G KE++ + K+ + M G+ Y I L + K
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+A ++ M S+G P+ VT S I G CK G A + ++ M GL+PN VY ++
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
+ +CK + AL + P+ T L+ GL + V A+ + E K
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407
Query: 389 -NVDTWNEIEAG 399
+V T+N + +G
Sbjct: 408 PDVYTYNILVSG 419
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R+G + V N + + ++ EA LL L+ P+ T++ I G+C E
Sbjct: 52 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111
Query: 304 EAKKFYRIM-SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
EA R M + G++P+ + +++ +CK G A+ + + G + T ++
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171
Query: 363 VTGLAGASKVSEAKELIGLVKEKFTKN-----VDTWNEIEAGL 400
V LA K+ +A L+ EK T N + T+N + GL
Sbjct: 172 VDWLAKNKKIQDAVALM----EKITANGCTPTIATYNALLNGL 210
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
LRH F +LL E K V ++ K G +PD+ YN ++ + ++ A
Sbjct: 269 LRH----FTSLLYGWCREGKIMEAKHVLVQI-KEAGFEPDIVVYNNLLGGYAQAGKMRDA 323
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ +LAEM + + PNA+SF L+ F K EK ++ ++ M+ G ++ V Y I
Sbjct: 324 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 383
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
CK +A +LD+M+ KG P+ ++Y + K EE + M G P+
Sbjct: 384 FCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 443
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++Y TM+ +CK GD + A+ E A G P T +V G + EA
Sbjct: 444 LNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEA 498
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 35/276 (12%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA A EM + + +F L+ + + E R+F E + G +
Sbjct: 314 YAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGS-GCEA 372
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY +I FC+ ++ AY IL +M +K P+ S+ ++ K+E+ E+ +++
Sbjct: 373 DVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELI 432
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + G +++YN I +CKL EA L EM + G+ P TY ++GF
Sbjct: 433 EEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 492
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA +++ M GL P + T+
Sbjct: 493 GCLVEACDYFKEMVERGLLS---------------------------------APQYGTL 519
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWN 394
K L L A K+ AK + + K + NV W
Sbjct: 520 KELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWT 555
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +Y I +L K+R+ AL++EM + P +T FI + +
Sbjct: 159 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMV 216
Query: 306 KKFYRI---MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
KK + M G P+ V+ ++ +CK G + A E + + PN SL
Sbjct: 217 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF-EDMRVRFNPNLRHFTSL 275
Query: 363 VTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+ G K+ EAK ++ +KE F ++ +N + G Q
Sbjct: 276 LYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 316
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 53/317 (16%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL-------TI 157
PD+ N + +I+Y M + A++ + M H + ++ A LL +L T+
Sbjct: 116 PDV-NAHILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTV 174
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
K YK++ RV G+ P++ YN +I A C+S D A ++ EM+ KS+ P+
Sbjct: 175 WKSYKKMIRV--------GVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLY 226
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L++ + ++ + + V MER G+ + YN I+ CK K EA L E+
Sbjct: 227 TYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREI 286
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL-------------------- 317
K + PN VTY+ I G+C+ +FEEA + ++M GL
Sbjct: 287 --KDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRI 344
Query: 318 ---------------SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
P++ T++ CK GD ++AL + + G + T K+L
Sbjct: 345 RDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKAL 404
Query: 363 VTGLAGASKVSEAKELI 379
+ G + AKEL+
Sbjct: 405 IHGFCWVRDMESAKELL 421
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 149/356 (41%), Gaps = 78/356 (21%)
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+ +Y+ +P+L HA +++L A +T+ +++K+M + ++ +N L
Sbjct: 142 VLEYMRLHGFKPNL-----HACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVL 196
Query: 152 LLALTIAKDYKEVKRVFIE------FPKTY----------------------------GI 177
+ A + D ++ +++ E FP Y G+
Sbjct: 197 IHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGV 256
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
PD+ TYN +I FC+ A + E+ K + PN ++ L+ G+ + +E+ +
Sbjct: 257 SPDIVTYNSLIYGFCKEGKMREAVKLFREI--KDVSPNHVTYTTLIDGYCRVNDFEEALR 314
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM-------------------- 277
+ ++ME G+ GV+ YN + LC+ + +A LL+EM
Sbjct: 315 LCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYC 374
Query: 278 ---------------LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
L G++ +S TY I+GFC + E AK+ M + GLSP
Sbjct: 375 KIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYC 434
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
Y +V C+ G+ + E + KG+ + + ++L+ L +V A+++
Sbjct: 435 TYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGFAEKI 490
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 53/295 (17%)
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRV--------FIEFPKTYGI------KPDLDTY--N 185
+HS+ + A++ LT K +K + + FI P PD++ + +
Sbjct: 65 KHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAHILS 124
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ + A +L M KPN + L+ K+ + V K + M R
Sbjct: 125 WLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRV 184
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALL------------------------------- 274
G+ + +YNV IH+ CK +A+ L+
Sbjct: 185 GVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEA 244
Query: 275 ----DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
D M G+ P+ VTY+ IYGFCK+G EA K +R + + +SPN Y T++
Sbjct: 245 LCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKD--VSPNHVTYTTLIDG 302
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
C+ D+E AL CK AKG T S++ L ++ +A +L+ + E+
Sbjct: 303 YCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGER 357
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 1/216 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + N E A+R K M+ L V +N++L L ++ ++ E + ++P
Sbjct: 303 YCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGER-KVEP 361
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D T N +I A+C+ D SA + ++M ++ ++ ++ AL+ GF E ++L
Sbjct: 362 DNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELL 421
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G+ G Y+ + C+L +LLDE L+KG + I C
Sbjct: 422 FCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQ 481
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
A+K Y M G+S +S +Y ++ Y K G
Sbjct: 482 ERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDG 517
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 4/238 (1%)
Query: 56 EKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAH 115
E+ L +C+ HL ++ + KL E ++ L E+ R ++ + +
Sbjct: 310 EEALRLCKVME-AKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERK-VEPDNVTCN 367
Query: 116 SII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
++I Y + + A++ +M + L+ + AL+ +D + K +
Sbjct: 368 TLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDV 427
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G+ P TY+ ++ +CE + + S+L E K + S AL+ +E+
Sbjct: 428 -GLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGF 486
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
K+ M G+ +Y ++ K K +L EM + + N Y F
Sbjct: 487 AEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKLYRCF 544
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK +L L K +K V + E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDC-G 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A + + + ++P+ SF L+ G+ + ++
Sbjct: 132 YPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+ + A + Y+ M + LSP+ Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 312 ITYTTLIDGCCKEGDLETAFE 332
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F + + LR SV +FN L+ D E R+ + G++PD+ TY+ +I
Sbjct: 158 VFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS-GVQPDVYTYSVLINGL 216
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ S A + EM K + PN +F L+AG K + + ++ + M + +
Sbjct: 217 CKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDL 276
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I+ LCK +A L+DEM KG+KP+ +TY+ I G CK+G+ E A + +
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKR 336
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + + Y ++ +C+ G Y A +E ++ G P+ T ++
Sbjct: 337 MIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGD 396
Query: 372 VSEAKELI 379
V +L+
Sbjct: 397 VWTGSKLL 404
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 16/262 (6%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ D + + VF K +G++P + ++N ++ + D + + + M
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITK-WGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM 197
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++P+ ++ L+ G KE K +D N + M G+ + I CK R+
Sbjct: 198 HASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRV 257
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A + +MLS+ + P+ +TY+ IYG CK G+ ++A MS GL P+ Y T+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 317
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGL 381
+ CK GD ETA K I + + +L++GL + +A+++ +GL
Sbjct: 318 IDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGL 377
Query: 382 ---------VKEKFTKNVDTWN 394
+ +F K D W
Sbjct: 378 KPDTGTYTMIINEFCKKGDVWT 399
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PDL TYN +I C+ D A+ ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP++ TY+ I F
Sbjct: 332 EHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGHVPS 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S+ IN L + + + + +E+ + + N I + + + A+ +
Sbjct: 205 DVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIY 264
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
K+M L + +N L+ L D K+ + E G+KPD TY +I C+
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDKITYTTLIDGCCK 323
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D +A+ M +++I+ + ++ AL++G +E +Y D KVL+ M G+K
Sbjct: 324 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGT 383
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
Y + I+ CK LL EM G P+ V+
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFY+E +L G + + +N+ +H CK A+ + + + G
Sbjct: 119 LVWGFYEE--------ILDC----GYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWG 166
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+++ + G+ + G+ +E + M SG+ P+ Y ++ +CK + A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
G E + KG VPN T +L+ G +V A E+ ++ + + ++ T+N + GL
Sbjct: 227 GLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 2/260 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG++ + A+ TF++M + ++ A NA L +L A +E K++F K G+ P
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVP 501
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN ++K + + + A +L+EM +P+ +L+ YK ++ ++ K+
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M+ +K V YN + L K K EA L + M+ KG PN++T++ CK+
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
A K M + G P+ Y T+++ + K G + A+ F + + K P+F T+
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTL 680
Query: 360 KSLVTGLAGASKVSEAKELI 379
+L+ G+ AS + +A ++I
Sbjct: 681 CTLLPGVVKASLIEDAYKII 700
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 8/327 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFK 134
F+I I L A N + L+ + PD+ ++ A + A F+
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC---TARKLDCAKEVFE 317
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+M + + + LL + +D VK+ + E K G PD+ T+ ++ A C++
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDALCKA 376
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A+ L M + I PN ++ L+ G + + +D ++ ME G+K Y
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
V I K A ++M +KG+ PN V + +Y K G EAK+ + + +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
GL P+S Y M+ K G+ + A+ E + G P+ + SL+ L A +V E
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 375 AKELIGLVKE-KFTKNVDTWNEIEAGL 400
A ++ +KE K V T+N + AGL
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 16/294 (5%)
Query: 98 LEELKTRPDLQNERFHAH----------SIILYGQANMTEHAVRTFKEMDEHKLRHSVGA 147
LEE+ DL +R S+ + G +A+R +E +S
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 148 FNALLLALTIAKDYKEV-KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
LLL + EV +R+ +E G +P L TY+ ++ + D S +L E
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILE-----GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ +KPN +F + + K + ++L+ M+ G V Y V I +LC RK
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
AK + ++M + KP+ VTY + F + + + K+F+ M G P+ +
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+V +CK G++ A +G +PN T +L+ GL ++ +A EL G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 2/238 (0%)
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ +F +F K G++P L TYN +I E+ A + ++ P+ +++ L+
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLD 828
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS-KGMK 283
+ K K +++ ++ + M + ++ +N+ I L K +A L +++S +
Sbjct: 829 AYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P + TY I G K G EAK+ + M + G PN ++Y ++ K G+ + A
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
K + +G P+ T LV L +V E +KE +V +N I GL
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 139/331 (41%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
DR+ + +++ S+ + + Q+ E++ PD+ ++ G N E A
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG--NFGE-AF 383
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
T M + + ++ +N L+ L + +F ++ G+KP TY I
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDY 442
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ +S DS SA +M K I PN + A + K + + ++ ++ G+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
YN+ + K+ + EA LL EM+ G +P+ + + I K +EA K +
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M L P Y T++ + K G + A+ + + KG PN T +L L
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 371 KVSEA-KELIGLVKEKFTKNVDTWNEIEAGL 400
+V+ A K L ++ +V T+N I GL
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 116/275 (42%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E F M + ++ + + +L++ K+ + + +G + +YN
Sbjct: 135 EEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM-REFGFVLNAYSYNG 193
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +S + A + M + +P+ ++ +L+ G K + V +L+ ME G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K V + + I L + K EA +L M +G P+ VTY+ I C + AK
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ + M P+ Y T++ D ++ F E G VP+ T LV L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 367 AGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
A EA + + +++++ N+ T+N + GL
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 8/324 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAVRTFK 134
+++ I L EA+ ++K+ PD+ F + YG++ + +K
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA---YGKSGKIDELFELYK 844
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
EM H+ + N ++ L A + + ++ + P TY +I +S
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A + M +PN + + L+ GF K + + + + M + G++ + Y
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+V + LC + + E E+ G+ P+ V Y+ I G K EEA + M
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 315 S-GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
S G++P+ Y +++ + G E A E G PN T +L+ G + + K
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 374 EAKELI-GLVKEKFTKNVDTWNEI 396
A + +V F+ N T+ ++
Sbjct: 1085 HAYAVYQTMVTGGFSPNTGTYEQL 1108
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 65 ITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 123
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 124 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 183
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 184 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGR 243
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 244 CKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 303
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 304 FTYTTLIDGCCKEGDLDTAFE 324
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++ +
Sbjct: 116 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMNGYI 174
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N++ M G+
Sbjct: 175 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 234
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 235 TFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 294
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD +TA K I + + +L++GL +
Sbjct: 295 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 354
Query: 373 SEAKELI---------------GLVKEKFTKNVDTW 393
+A++++ ++ +F K D W
Sbjct: 355 VDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVW 390
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 147 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 205
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 206 NGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLL 265
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ +
Sbjct: 266 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 325
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + L P++ Y ++ CK
Sbjct: 326 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCK 385
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G P+ T L+ G
Sbjct: 386 KGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L KL+ +E+L G + ++ ++ FCKDG+ A+ + ++ GL
Sbjct: 100 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 159
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ + GD + +A G P+ T L+ GL SK+ +A E
Sbjct: 160 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 219
Query: 378 L 378
L
Sbjct: 220 L 220
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K A L DEML KG+ PN VT++ I G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFE 338
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 146/339 (43%), Gaps = 29/339 (8%)
Query: 83 NKLSEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT------ 132
N+ S+ F+G I+ YLE R ++ R H + + EH ++
Sbjct: 67 NQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLV 126
Query: 133 ---FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMN 185
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ D + + + M ++P+ ++ L+ G KE K + N + M G+
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVP 245
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
MS GL P+ Y T++ CK GD +TA K I + + +L++GL
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365
Query: 370 SKVSEAKEL------IGL---------VKEKFTKNVDTW 393
+ +A+++ +GL + +F K D W
Sbjct: 366 GRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVW 404
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 339
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y +V CK
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G P+ T L+ G
Sbjct: 400 KGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I PD+ T+ ++ FC+ A ++LA M + IKP ++ +L+ G++ ++
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAK 232
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M + G+ + Y++ I+ CK++ EA LL EM K + PN VTYS I G
Sbjct: 233 SIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G A K M + G PN Y +++ +CK + A+ + +G PN
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352
Query: 357 TTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
T L+ GL + K+ +A+++ L+ + NV T+ + G
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQG 396
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
++ V +N+L+ + K + K +F + G+ PD+ +Y+ +I FC+ A
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ-LGVSPDIQSYSILINGFCKIKMMDEA 266
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+L EM K I PN ++ +L+ G K K K++ M G + Y+ + +
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
LCK + A ALL +M ++G++PN TY+ I G C+ G E+A+K + + G + N
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLN 386
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y M+ C G ++ AL + G +PN T + ++ L + A++L+
Sbjct: 387 VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
+++ F V N++ A +
Sbjct: 447 EMIETNFDGRVALTNDLIASI 467
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 138/327 (42%), Gaps = 51/327 (15%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDL 181
N + AV F + + FN +L +L +K Y V + +EF GIKP+L
Sbjct: 41 NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEF---RGIKPNL 97
Query: 182 DTYNRVIKAFCESSDSSSAYSILA------------------------------------ 205
N +I +FC+ SA+S+L
Sbjct: 98 VNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGK 157
Query: 206 ---------EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+M ++I P+ +F LV GF KE + ++ VL MM G+K GV YN
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ +++ +AK++ + M G+ P+ +YS I GFCK +EA + + M +
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+ PN Y +++ +CK G AL E +G PN T S++ L +V A
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337
Query: 377 ELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
L+ +K + N+ T+ + GL Q
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQ 364
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F +M + V F L+ KE K V + GIKP + TYN ++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNV-LAMMMIQGIKPGVVTYNSLM 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + A SI M + + P+ S+ L+ GF K + ++ ++L+ M +
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I LCK K + A L+DEM +G PN VTYS + CK+ + A
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M N G+ PN Y ++ +C+ G E A ++ + KG N T ++ G
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD 399
Query: 369 ASKVSEAKELI 379
EA L+
Sbjct: 400 KGLFDEALTLL 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F ++D A S+ + +++ P F ++ K + Y V + Q ME G+K
Sbjct: 36 TFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 95
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD---------- 299
+ N+ I+S C+L A ++L ++L G KPN++T + I G C +
Sbjct: 96 NLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV 155
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G ++A + M ++P+ + +V CK G + A + +G P T
Sbjct: 156 GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTY 215
Query: 360 KSLVTGLAGASKVSEAKEL 378
SL+ G +V++AK +
Sbjct: 216 NSLMDGYFLVKQVNKAKSI 234
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 7/291 (2%)
Query: 115 HSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S I+ G M E A +EM + ++ + AL +E ++VF E
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVF-ETM 364
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G KPD+ TY +I FC+ ++A +L MD+ ++KPN + ++ GF K +
Sbjct: 365 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 424
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG--MKPNSVTYS 290
E+ ++ Q + + G+ YN I++LCKL+K EA LL EM + ++P+ VTYS
Sbjct: 425 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 484
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I+G K G E A M ++G+ P+ Y +++ + G A+ +E +
Sbjct: 485 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA 544
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
G P+ T +LV L S V A +L+ +++ T N T+ +E G
Sbjct: 545 GIFPDDHTYGTLVQILC-RSDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 15/318 (4%)
Query: 88 ANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSV 145
+YFN +S P+ +++++ G +A+ E A F+EM + +
Sbjct: 183 VSYFNSVS---------PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDI 233
Query: 146 GAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
A+++L+ L+ A E +++ ++ G P Y ++ C+ A +
Sbjct: 234 IAYSSLIDGLSKAGRVDEARKL-VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 292
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
EM R+ ++P ++ +V G+ K E V++ M Y + I +L +
Sbjct: 293 EMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIG 352
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ EA+ + + M+ KG KP+ TY I FCK+G+ A R+M + + PN +Y
Sbjct: 353 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 412
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV--- 382
++ K E AL + + G +P+ T +++ L K+ EA EL+ +
Sbjct: 413 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 472
Query: 383 KEKFTKNVDTWNEIEAGL 400
KE+ ++ T++ I GL
Sbjct: 473 KEELEPSIVTYSMIIHGL 490
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 1/245 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V +FN LL D++ V + E K+ GI + T+ ++ A C D A S
Sbjct: 127 NVSSFNILLRGFAARDDFEVVNALLREM-KSRGITSNGATHGVILSALCARRDLDKAVSY 185
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
+ +P ++ LV G K K E V + M R G K + Y+ I L K
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ EA+ L+D M+++G P +V Y+ + G CK G +EA K + M L P
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDT 305
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y +V G E A +E + P+ + + L + EA+++ +
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 365
Query: 384 EKFTK 388
EK K
Sbjct: 366 EKGCK 370
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 35/198 (17%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS-----GVSM-------------- 253
+PN SSF L+ GF + +E VN +L+ M+ G+ S GV +
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVS 184
Query: 254 ----------------YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
Y V + LCK K A + +EM+ KG KP+ + YS I G
Sbjct: 185 YFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLS 244
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K G +EA+K +M G P + Y ++V +CK G + A+ +E + P
Sbjct: 245 KAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 304
Query: 358 TMKSLVTGLAGASKVSEA 375
T +VTG G KV +A
Sbjct: 305 TYSFIVTGYIGMGKVEKA 322
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTF 133
+ ++ IN L + + + L E++ R + +S+I++G + M E A
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 503
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM ++ + + +L+ L A + E K GI PD TY +++ C
Sbjct: 504 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA-GIFPDDHTYGTLVQILCR 562
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
S D +A+ +L EM R PN +F A+ GF
Sbjct: 563 S-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 10/255 (3%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL + EK+ E P+ H + I I+ + + L L +
Sbjct: 347 ALYSIGRREEAEKVFETMVEKGCKPDMH----TYGIIIDNFCKEGSMAAATHVLR-LMDK 401
Query: 105 PDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
++ R+ +++I+ G +++ E A+ ++ + + + S +N ++ AL K
Sbjct: 402 AAVKPNRY-IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMD 460
Query: 163 EVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
E + E + ++P + TY+ +I + A+ +LAEM + P+ ++ +
Sbjct: 461 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 520
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ K ++L+ M + G+ Y + LC+ A LL EM+ G
Sbjct: 521 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNG 579
Query: 282 MKPNSVTYSHFIYGF 296
PN T+ GF
Sbjct: 580 HTPNEFTFKAVEKGF 594
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 4/259 (1%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ NMTE A T +M+E+ L +N L+ A A + R+ E + G+K D
Sbjct: 401 KGNMTE-ATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM-TSKGLKIDT 458
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQ 240
T N ++ C AY++L ++ + S+G L+ G++K+EK + +N +
Sbjct: 459 WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M ER M S ++ YN I LC+ RK +A L+EML G+ P+ TY+ I+GFC +G
Sbjct: 519 MKERQIMPSTIT-YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEG 577
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
N E+A +F+ M + P+ ++ +C+ G E AL ++KG + T
Sbjct: 578 NVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYN 637
Query: 361 SLVTGLAGASKVSEAKELI 379
++++ L K A +L+
Sbjct: 638 TIISSLCKEGKFENAYDLL 656
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 113 HAHSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
++ +I++YG + + A+ +M E ++N +L AL + +E + + ++
Sbjct: 214 NSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLD 273
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K+ G+ P+ TYN ++ +C A ++ M R ++ P ++ LV GF +
Sbjct: 274 M-KSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG 332
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
K ++ ++ ME+ + V YN I + R +E +L++EM KG+K N+VTY+
Sbjct: 333 KIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYN 392
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ CK GN EA M +GLSP+ Y T++ CK G A E +K
Sbjct: 393 IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSK 452
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G + T+ +++ L K+ EA L+
Sbjct: 453 GLKIDTWTLNTILHCLCVEKKLDEAYNLL 481
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 11/325 (3%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D ++++ ++ L + L ++K++ N+ + + Y + + + A +
Sbjct: 247 DTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVI 306
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+ M + L +V +N L+ E R+ E K + PD+ TYN +I +
Sbjct: 307 EIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKM-NVLPDVVTYNTLIDGCSQ 365
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
DSS YS++ EMD+K +K NA ++ ++ K+ + L ME G+
Sbjct: 366 WRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVT 425
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I + CK K +A ++DEM SKG+K ++ T + ++ C + +EA S
Sbjct: 426 YNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS 485
Query: 314 NSGLSPNSSVYFTMV--YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
G + Y ++ YF + GD AL E + +P+ T S++ GL + K
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGD--RALNLWDEMKERQIMPSTITYNSVIGGLCQSRK 543
Query: 372 VSEAKELI------GLVKEKFTKNV 390
V +A + + GLV ++ T N+
Sbjct: 544 VDQAIDKLNEMLENGLVPDETTYNI 568
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 21/295 (7%)
Query: 107 LQNERFHA-HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
+ ++R H H +IL H R E + L S+GA+ + + + ++K
Sbjct: 116 ISSDRQHELHKLIL--------HPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMK 167
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS---AYSILAEMDRKSIKPNASSFGAL 222
R+ +P+L T N ++ + SSS A +L + + + PN +SF L
Sbjct: 168 RL--------NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNIL 219
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G+ E K +D + M +G YN + +L K R EA+ LL +M SKG+
Sbjct: 220 IYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGL 279
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN TY+ + G+C+ G +EA K IM+ + L P Y +V C G + A
Sbjct: 280 SPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFR 339
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
E +P+ T +L+ G + SE LI + +K K N T+N I
Sbjct: 340 IRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNII 394
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 3/259 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A A R EM L+ N +L L + K E + K G
Sbjct: 433 YCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKR-GYIL 491
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKV 238
D +Y +I + + A ++ EM + I P+ ++ +++ G + K + ++K+
Sbjct: 492 DEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKL 551
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+M+E G+ + YN+ IH C +A +EM+ KP+ T + + G C+
Sbjct: 552 NEMLEN-GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G E+A K + + + G + Y T++ +CK G +E A E AK P+ T
Sbjct: 611 EGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYT 670
Query: 359 MKSLVTGLAGASKVSEAKE 377
K ++ L A ++ EA+E
Sbjct: 671 YKVIIAALTDAGRIKEAEE 689
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 37/310 (11%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A R EM++ + V +N L+ + +D EV + E K G+K + TYN
Sbjct: 335 DEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKK-GVKCNAVTYNI 393
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++K C+ + + A + L +M+ + P+ ++ L+ + K K +++ M G
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG 453
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALL-------------------------------- 274
+K N +H LC +K EA LL
Sbjct: 454 LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRAL 513
Query: 275 ---DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
DEM + + P+++TY+ I G C+ ++A M +GL P+ + Y +++
Sbjct: 514 NLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGF 573
Query: 332 CKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
C G+ E A F E I + P+ T L+ GL + +A +L LV + +V
Sbjct: 574 CLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDV 633
Query: 391 DTWNEIEAGL 400
T+N I + L
Sbjct: 634 VTYNTIISSL 643
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 37/241 (15%)
Query: 81 AINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK 140
AI+KL+E NG+ PD H L G E A + EM E+
Sbjct: 547 AIDKLNEM-LENGLV---------PDETTYNIIIHGFCLEGNV---EKAFQFHNEMIENL 593
Query: 141 LRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA 200
+ V N LL L ++ ++F + G D+ TYN +I + C+ +A
Sbjct: 594 FKPDVYTCNILLRGLCREGMLEKALKLFNTLV-SKGKDIDVVTYNTIISSLCKEGKFENA 652
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK-VLQMME---------RYG---- 246
Y +L EM+ K + P+ ++ ++A + ++ + L+M+E + G
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQN 712
Query: 247 -MKSGVS--------MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ S VS Y+ +I+ LC K +A L E+ +G+ N TY + + G
Sbjct: 713 VLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLI 772
Query: 298 K 298
K
Sbjct: 773 K 773
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIKPD+ Y +I + C++ + A S+ +M+ I+P+ + +LV G ++ D
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L+ M + +K V +N I + K K +A+ L +EM+ + PN TY+ I G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC +G +EA++ + +M G P+ Y +++ CK + A+ E KG N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
T +L+ G K + A+E+ +V N+ T+N
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN 391
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F M E + S+ F LL + K + V + + + G+ DL T N ++
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL-CDHLQIMGVSHDLYTCNLLM 114
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC+SS A S L +M + +P+ +F +L+ GF + E+ ++ M G+K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V MY I SLCK A +L D+M + G++P+ V Y+ + G C G + +A
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
R M+ + P+ + ++ K G + A E I PN T SL+ G
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 369 ASKVSEAKELIGLVKEK 385
V EA+++ L++ K
Sbjct: 295 EGCVDEARQMFYLMETK 311
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 10/277 (3%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N E A+ +M E ++ V + ++ +L +F + + YGI+PD+
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVV 213
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
Y ++ C S A S+L M ++ IKP+ +F AL+ F KE K+ D ++ M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
R + + Y I+ C EA+ + M +KG P+ V Y+ I GFCK
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A K + MS GL+ N+ Y T++ + G A +++G PN T L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 363 VTGLAGASKVSEA---------KELIGLVKEKFTKNV 390
+ L KV +A +E+ G+ +T NV
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 4/255 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ EM + ++ + +L+ + E +++F +T G PD+ Y +I FC
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGCFPDVVAYTSLINGFC 328
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A I EM +K + N ++ L+ GF + K +V M G+ +
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSK---GMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
YNV +H LC K +A + ++M + G+ PN TY+ ++G C +G E+A +
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
M + Y ++ MCK G + A+ +KG PN T ++++GL
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 370 SKVSEAKELIGLVKE 384
EA L +KE
Sbjct: 509 GLKHEAHVLFRKMKE 523
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ S + A + M P+ F L+ K +K++ V + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + N+ ++ C+ + A + L +M+ G +P+ VT++ I GFC E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA M G+ P+ +Y T++ +CK G AL + G P+ SLV
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 364 TGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
GL + + +A L+ G+ K K +V T+N +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 135/337 (40%), Gaps = 35/337 (10%)
Query: 11 LNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLL----KSESNPEKILEICRAAA 66
L+LF Q + + ++ + L + + R A +LL K + P+ I A
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 67 LTPESHL--------DRLAFSIAINKLSEANYFNGISQ-----------YLEELK-TRPD 106
E + + SIA N + + NG YL E K PD
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 107 LQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
+ A++ ++ G + + A++ F EM + L + + L+
Sbjct: 317 VV-----AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK---SIKPNASSFGA 221
+ VF + G+ P++ TYN ++ C + A I +M ++ + PN ++
Sbjct: 372 QEVFSHMV-SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G K E V + M + M G+ Y + I +CK K A L + SKG
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
+KPN VTY+ I G ++G EA +R M G+S
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A + F M+ V A+ +L+ K + ++F E + G+ + TY
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYT 356
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ F + + A + + M + + PN ++ L+ K + + + M++
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 246 ---GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G+ + YNV +H LC K +A + ++M + M +TY+ I G CK G
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ A + + + G+ PN Y TM+
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMI 502
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 137/308 (44%), Gaps = 44/308 (14%)
Query: 111 RFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVG----AFNALLLALTIAKDYKEVKR 166
R AH ++ Y +A A+R + M + + A N L++A I K +
Sbjct: 162 RQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALE---- 217
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
F E + G+ PD+ TYN +IK C + A +++ M + P+ S+ +++
Sbjct: 218 -FAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFL 276
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK----------LR----------- 265
KE++ DV +L+ M G+ YN+ IH L K LR
Sbjct: 277 CKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDE 336
Query: 266 --------------KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
+ AEAK ++ EM+SKG +P+ VTYS + GFC+ G ++A+K +
Sbjct: 337 VGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKH 396
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M +G PN+ + ++ +CK G A +S + W P+ T ++ G K
Sbjct: 397 MYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGK 456
Query: 372 VSEAKELI 379
+ E+ +++
Sbjct: 457 LKESCDVV 464
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 52/373 (13%)
Query: 50 KSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE---LKTRPD 106
K ++ + +LE A + P D++ +++ I+ L++ + + +L E + R D
Sbjct: 280 KRVADVQNLLERMSDAGIFP----DQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVD 335
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
HS L G+ M E A EM R V ++A++ + + ++
Sbjct: 336 EVGYSATVHSFCLNGR--MAE-AKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARK 392
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
+ K G KP+ T+ ++ C+ SS A+ +L + + + P+A ++ ++ GF
Sbjct: 393 MMKHMYKN-GCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGF 451
Query: 227 YKEEKY-EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
+E K E + V+QM+++ + V + N+ IH+LC RK A+AK +++ SKG N
Sbjct: 452 RREGKLKESCDVVMQMLQKGFFPTTVEI-NLLIHALCNERKPADAKDFMEQCQSKGCFIN 510
Query: 286 SVTYSHFIYGFCKDGNFE-----------------------------------EAKKFYR 310
V ++ I+GF + G+ E EA
Sbjct: 511 VVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVE 570
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM-KSLVTGLAGA 369
M N GL P Y T+++ C+ G E L + +AK F++ ++ L
Sbjct: 571 KMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAK---EGFSSAYNQVIEKLCAF 627
Query: 370 SKVSEAKELIGLV 382
K+SEA L+ V
Sbjct: 628 GKLSEANNLLSKV 640
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD TYN +I + + A S L E + K + + + A V F + +
Sbjct: 296 GIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEA 355
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + V Y+ + C++ + +A+ ++ M G KPN+VT++ + G
Sbjct: 356 KEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNG 415
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G EA + +P++ Y +++ + G + + + + KG+ P
Sbjct: 416 LCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPT 475
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ L+ L K ++AK+ + + K
Sbjct: 476 TVEINLLIHALCNERKPADAKDFMEQCQSK 505
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A ++ M R+ + F L+ + + K +VLQ+M++ G + + N+ ++
Sbjct: 145 ARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVN 204
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
L + +A + M G+ P+ VTY+ I G C +A + M +G P
Sbjct: 205 VLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLP 264
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
+ YFT++ F+CK + G P+ T L+ GLA EA
Sbjct: 265 DKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEA 320
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 11/308 (3%)
Query: 76 LAFSIAINKLSEANYFNG---ISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAV 130
++F+ I+ + A +G + + + E PD+ + + ++ G + E A
Sbjct: 152 VSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV-----YTYGALIQGLCRVGRIEDAR 206
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F++M ++ + F L+ A D + + + E + G++PD TYN ++
Sbjct: 207 GVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDAVTYNAIVNG 265
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + D SA I+ EM ++P+ ++ L+ G+ KEE+ + ++ Q M G+
Sbjct: 266 LCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLD 325
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L K + A+A+ +L EM+ G++P++ TY+ I FC+ G+ + + +
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G P Y ++ CK G + A I G P+ T L+ G
Sbjct: 386 EMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 445
Query: 371 KVSEAKEL 378
KV++ +EL
Sbjct: 446 KVTDIEEL 453
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM +R +V +FN ++ + A D + + + G+ PD+ TY +I
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA-GVTPDVYTYGALI 193
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C A + +M + +KPNA F L+ K+ E + ++ + M G++
Sbjct: 194 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 253
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD--------- 299
YN ++ LC+ R A ++ EM S G++P++VTY+ I G+CK+
Sbjct: 254 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 313
Query: 300 --------------------------GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
G +A++ M +GL P+++ Y ++ C+
Sbjct: 314 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 373
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
GD +T L KE KG P T ++ G ++ A L IG+ + T
Sbjct: 374 KGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDIT 433
Query: 388 KNV 390
N+
Sbjct: 434 YNI 436
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ L + + VF E ++ G++ + ++N +I C + D A ++ M
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEM-QSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 177
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P+ ++GAL+ G + + ED V + M GMK ++ + I + CK
Sbjct: 178 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
L EM +G++P++VTY+ + G C+ + + A M ++GL P++ Y T+
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+ CK + + A+ + +A+G + T +L++GL+ A + ++A+ ++G + E
Sbjct: 298 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ +N +++ + +SA ++ EM + ++ SF +++G + +
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G+ V Y I LC++ + +A+ + ++M +GMKPN+V ++ I
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G+ E + +R M G+ P++ Y +V +C+ D ++A G E + G P+
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T +L+ G ++ A E+ +V E + T+ + +GL
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA A ++L G+ P + ++ + + G A+ + M + G+ + TM+
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
MC+ GD + A + G P+ T +L+ GL ++ +A+
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDAR 206
>gi|18087879|gb|AAL59033.1|AC087182_16 hypothetical protein [Oryza sativa Japonica Group]
gi|31432747|gb|AAP54340.1| expressed protein [Oryza sativa Japonica Group]
Length = 428
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 32/353 (9%)
Query: 49 LKSESNPEKILEICRAAALT-----PESHLDRLAFSIAINKLSEANYFNGISQYL----E 99
++ E++P +I + A AL+ P H R FS+A ++L+ + + L +
Sbjct: 56 VRGEADPARIHSLV-ATALSRPDDYPRLHGSRPLFSLAASRLARLRRPDLAASLLRALLD 114
Query: 100 ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
P L A +I L+ + A+R F D S + +ALL AL A
Sbjct: 115 SAPASPGLL-----ARAISLFPG---PDDALRAFS--DSAPAARSDVSLSALLSALFRAG 164
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK---SIKPNA 216
+VK ++G+ P ++N ++ A ++S+ ++A +L EM +K P+
Sbjct: 165 RVDDVKSTLASAETSFGVAPGRASHNVLLHALVKNSELAAARKLLGEMAKKLKHRPAPDI 224
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S+ ++AG+ + E K+L+ + ++ V YN RI K + + + LLD
Sbjct: 225 VSYNTVLAGYSAQGDEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDA 284
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM---------SNSGLSPNSSVYFTM 327
M SK + PN +TY+ + G+CK+GN A + ++ M S+ G+S +S Y +
Sbjct: 285 MESKDVAPNYLTYNALVQGYCKEGNVGSAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVL 344
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ + + AL CK A P F +K LV GL K +EAK+++
Sbjct: 345 FRSLVEKERLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKGGKSAEAKDVVA 397
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 37/315 (11%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ A+R F M ++ A +ALL AL ++ ++VF + + G+ +
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRA-GVAMNT 180
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN ++ ++ D++ A S++ MD + + SF ++A + ++ + V +
Sbjct: 181 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 240
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME G+K+ V +N IH LCK R+ EA LL EM G+ P+ VTY+ + G+C+ G+
Sbjct: 241 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 300
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYF-----------------------------------T 326
EEA K M G+ P + Y T
Sbjct: 301 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 360
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEK 385
++ CK GD +AL + + G + T K+LV G A ++ EAKE L ++
Sbjct: 361 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 420
Query: 386 FTKNVDTWNEIEAGL 400
F+ N + I GL
Sbjct: 421 FSPNYSVLSWIVDGL 435
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 93 GISQYLEELKTRPDLQN---ERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
G + E L TR D +RF +++I LY + M A+ + M+ ++ V +
Sbjct: 194 GDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTW 253
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N+L+ L + KE ++ E G+ PD TY ++ +C + D A + EM+
Sbjct: 254 NSLIHGLCKERRVKEASQLLREM-AMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEME 312
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ P +++ A++ ++ K ++VN +L M+ +++ N I++ CK
Sbjct: 313 AMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMT 372
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A + M+ G++ + TY ++GFCK +EAK+ M +G SPN SV +V
Sbjct: 373 SALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 432
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+C + L E + +G+ P+ +SL+ L
Sbjct: 433 DGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRL 470
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 1/273 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ L + SQ L E+ + + + Y +A E AV+
Sbjct: 249 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLR 308
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM+ + V +NA+L L KEV + E + ++ D T N +I A+C+
Sbjct: 309 GEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDER-KVQADHVTCNTLINAYCK 367
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D +SA + M ++ + ++ ALV GF K ++ ++ + L M G S+
Sbjct: 368 RGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSV 427
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+ + LC A+ DE++ +G P+ Y I CK G + A + M
Sbjct: 428 LSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQ 487
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
GL + VY T+ G AL E
Sbjct: 488 GKGLEADCLVYATLACAYLTAGKPVAALDILNE 520
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 1/267 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I G A TE A F+E+ E L A+NALL K+ + + E ++ G
Sbjct: 298 ITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS-G 356
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD TY+ +I A+ + SA +L EM+ ++PN+ F ++A + K++
Sbjct: 357 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 416
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+VL+ M G+ YNV I + K A A D M +G++P++VT++ I
Sbjct: 417 QVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCH 476
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G+ +A++ + M SG SP ++ Y M+ + +E + ++G + N
Sbjct: 477 CKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANV 536
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVK 383
T +LV + + +A E + ++K
Sbjct: 537 VTYTTLVDIYGQSGRFKDAIECLEVMK 563
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 113 HAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +S+++ Y A E A KEM+ +R + F+ +L + +++ +V E
Sbjct: 362 HTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLRE 421
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
+ G+ PD YN +I F + + A + M + ++P+A ++ L+ K
Sbjct: 422 M-RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480
Query: 231 KYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS 290
+ ++ + M+ G + YN+ I+S + + + K LL +M S+G+ N VTY+
Sbjct: 481 HHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT 540
Query: 291 HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
+ + + G F++A + +M + GL P+S++Y ++ + G E A+ + A
Sbjct: 541 TLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD 600
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G P+ + SL+ + +EA ++ +KE
Sbjct: 601 GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 634
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ + E++ K+ N +++ + D F+ + G+ P T VI A
Sbjct: 242 KIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMS-FLAMVQGNGLSPKTATLVAVITA 300
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+ + A +I E+ + P ++ AL+ G+ K +D ++ MER G
Sbjct: 301 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPD 360
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y++ I + + A+ +L EM + G++PNS +S + + G ++++ + R
Sbjct: 361 EHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 420
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M NSG+SP+ Y M+ K + AL +G P+ T +L+ +
Sbjct: 421 EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480
Query: 371 KVSEAKELIGLVKE 384
++A+EL ++E
Sbjct: 481 HHNKAEELFEAMQE 494
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 130/298 (43%), Gaps = 5/298 (1%)
Query: 58 ILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSI 117
+L+ A+ + P S++ FS + + + Q L E++ + F+ I
Sbjct: 383 VLKEMEASGVRPNSYV----FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMI 438
Query: 118 ILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
+G+ N +HA+ TF M ++ +N L+ + + + + +F E + G
Sbjct: 439 DTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELF-EAMQESGC 497
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
P TYN +I +F E ++L +M + + N ++ LV + + +++D +
Sbjct: 498 SPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIE 557
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
L++M+ G+K +MYN I++ + +A M + G+KP+ + + I F
Sbjct: 558 CLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFG 617
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+D EA + M + L P+ Y T++ + + ++ +E G P+
Sbjct: 618 EDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 675
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES--SDSSSAYSILA 205
+NAL+ A D ++ + + G D Y+ +I++ + SDSS I A
Sbjct: 187 YNALIGACARNDDLEKALNLMSRMRRD-GFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYA 245
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
E++ I+ + ++ GF K L M++ G+ + I +L
Sbjct: 246 EIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAG 305
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ EA+A+ +E+ G+ P + Y+ + G+ K G+ ++A+ M SG SP+ Y
Sbjct: 306 RTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYS 365
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPN 355
++ G +E+A KE A G PN
Sbjct: 366 LLIDAYANAGRWESARIVLKEMEASGVRPN 395
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 9/205 (4%)
Query: 184 YNRVIKAFC-ESSDSSSAYSILAEMDRKSIKPNASS-FGALVAGFYKEEKYEDVNKVLQM 241
++ ++K+ C +SS +AYS++ ++R ++ + + L+ + EK + + +
Sbjct: 120 WHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEK---LYEAFLL 176
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+R + YN I + + +A L+ M G + V YS I +
Sbjct: 177 SQRQTLTPLT--YNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNK 234
Query: 302 FEEA--KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ + +K Y + + + + + ++ K GD A+ F G P T+
Sbjct: 235 SDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATL 294
Query: 360 KSLVTGLAGASKVSEAKELIGLVKE 384
+++T L A + EA+ + +KE
Sbjct: 295 VAVITALGNAGRTEEAEAIFEELKE 319
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+++ + L + N +G + L E+ + N + I + M + R E
Sbjct: 183 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG-RQLAE-- 239
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ V +NAL+ L +DYK + E + GI P++ +Y+ +I S
Sbjct: 240 --RFEPVVSVYNALINGLCKERDYKGGVELMSEMVEK-GISPNVISYSTLINELSNSGQI 296
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAG-FYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A+S+LA+M ++ PN + +LV G F + ++ ++ QM+ +G++ V YN
Sbjct: 297 ELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNT 356
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ C +A ++ M G PN TY I GF K G+ E A + M SG
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
PN VY +MV +C+ ++ A + + P+ T + + GL A ++ A+
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476
Query: 377 ELIGLVKEKF--TKNVDTWNEIEAGL 400
++ +++++ N+ T+NE+ GL
Sbjct: 477 KVFRQMEQQYRCPPNIVTYNELLDGL 502
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ +G++P++ YN +++ FC + A S+ M+ PN ++G+L+ GF K
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSL 402
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + M G V +Y + +LC+ K EA++L++ M + P+ T++ F
Sbjct: 403 EGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 462
Query: 293 IYGFCKDGNFEEAKKFYRIMSNS-GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G C G + A+K +R M PN Y ++ + K E A G +E +G
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ +T +L+ G A A +L+G
Sbjct: 523 VEWSTSTYNTLLHGSCNAGLPGIALQLVG 551
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 28/301 (9%)
Query: 122 QANMTEHAVRTFKEMDEHKL-RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
Q + A+ FK + L +H+ F ++ L + V+ + + K G
Sbjct: 51 QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCS 109
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
D + VI + + + A + + P+ + ++ E + + + V +
Sbjct: 110 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 169
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M+R G + V YNV + +LCK K AK LL EM +KG PN+V+Y+ I C+ G
Sbjct: 170 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVG 229
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+E ++ P SVY ++ +CK DY+ + E + KG PN +
Sbjct: 230 MVKEGRQL-----AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYS 284
Query: 361 SLVTGLAGASKVSEAKELIG----------------LVKEKFTKN-----VDTWNEIEAG 399
+L+ L+ + ++ A L+ LVK F + +D WN++ G
Sbjct: 285 TLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRG 344
Query: 400 L 400
Sbjct: 345 F 345
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 118/274 (43%), Gaps = 9/274 (3%)
Query: 86 SEANYFNGISQYL--EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
S N +S +L EE+ P++ R + I + + E AV + +M
Sbjct: 363 SHGNIDKAVSVFLHMEEIGCSPNI---RTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCP 419
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V + +++ AL +KE + + IE P + T+N IK C++ A +
Sbjct: 420 NVVVYTSMVEALCRHSKFKEAESL-IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 478
Query: 204 LAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+M+++ PN ++ L+ G K + E+ + + + G++ S YN +H C
Sbjct: 479 FRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSC 538
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS--NSGLSPN 320
A L+ +M+ G P+ +T + I +CK G E A + ++S P+
Sbjct: 539 NAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPD 598
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
Y +++ +C+ E + + I++ +P
Sbjct: 599 VISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 149/344 (43%), Gaps = 27/344 (7%)
Query: 42 TRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
TR A TLL +L C ++L P +H L ++ + + + +
Sbjct: 265 TRLAPTLLSFN-----LLLKCVCSSLVPRNHQLYLELALRV-----------VHRSIPAW 308
Query: 102 KTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
K PD +F +++ A + AV EM + + AFN +L A+ D
Sbjct: 309 KLVPD----KFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGD 363
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
++F F + G P TYN ++ + +A ++ M+R + P ++G
Sbjct: 364 VTGAAKLF-SFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYG 422
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
A+V G + + ED KV++ M G+ +++ I CKL + A + D M++
Sbjct: 423 AVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAA 482
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+KPN V YS I G + G EA+ +R M + PN Y +MV + GD A
Sbjct: 483 GIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQA 542
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA----KELIG 380
L F ++ + G PN T L+ GL + +A K ++G
Sbjct: 543 LSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLG 586
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 4/329 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D+ +S ++ L++A + + E+ + E F+ + ++T A + F
Sbjct: 313 DKFTYSTVVSALADAGRVDDAVALVHEMVVDGVVAAEAFNPVLGAMLRTGDVTG-AAKLF 371
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M S +N LL L + K V + + P + TY V+
Sbjct: 372 SFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAE-VVPGVMTYGAVVDGLVR 430
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
A ++ EM K + PN F ++ GF K + + ++V M G+K V +
Sbjct: 431 CGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVL 490
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I L + K EA+ L EM+ PN +TYS + G+ + G+ +A F+ M
Sbjct: 491 YSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDML 550
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G +PN+ Y ++ +C G + A+ K + +G VP+ S++ G + V
Sbjct: 551 RIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVD 610
Query: 374 EAKELI--GLVKEKFTKNVDTWNEIEAGL 400
L L + +V +N + GL
Sbjct: 611 AGLRLFYDMLARGDTHPDVICYNVLLDGL 639
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 2/228 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ + PD TY+ V+ A ++ A +++ EM + A +F ++ +
Sbjct: 306 PAWKLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDV 364
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
K+ M+ G + YNV +H L + A ++ M + P +TY
Sbjct: 365 TGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAV 424
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ G + G E+A K M + GL PN V+ ++ CK G+ + A +A G
Sbjct: 425 VDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGI 484
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
PN +++ GLA K++EA+ L +++ K N+ T++ + G
Sbjct: 485 KPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRG 532
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 37/254 (14%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + ++ L + +EE++++ + NE + I + + + A R +
Sbjct: 419 MTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDT 478
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M ++ +V ++A++ L E + +F E + + P++ TY+ +++ + +
Sbjct: 479 MVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV-PNIMTYSSMVRGYFQIG 537
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ--------------- 240
DSS A S +M R PNA ++ L+ G + +D V +
Sbjct: 538 DSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYT 597
Query: 241 ---------------------MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
M+ R V YNV + L + + A LL++ML
Sbjct: 598 SMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLD 657
Query: 280 KGMKPNSVTYSHFI 293
+ P++VT + F+
Sbjct: 658 QACDPDTVTCNTFL 671
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHK R +L L K +K V F E G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG-FYEESLECG 131
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ +F + + A S+ + + S++P+ SF L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M+ G++ V Y+V I+ LCK K +A L DEML G+ PN VT++ I G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + LS + Y T++Y +CK GD + A E KG P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 357 TTMKSLVTG 365
T +L+ G
Sbjct: 312 ITYTTLIDG 320
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
HS + G+ + + F + + LR SV +FN L+ D E R+ +
Sbjct: 144 HSFVKEGEIRLAQSV---FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G++PD+ TY+ +I C+ S A + EM + PN +F L+ G K + +
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++ + M + + + YN I+ LCK +A+ L+DEM KG+KP+ +TY+ I
Sbjct: 260 AMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G CK+G+ E A ++ + M + + Y ++ +C+ G A +E ++ G P
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
T ++ V +L+
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ DL TYN +I C+ D A ++ EM K +KP+ ++ L+ G KE E
Sbjct: 272 LSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ + M + ++ Y I LC+ + +A+ +L EMLS G+KP TY+ I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPN 320
CK G+ K + M G P+
Sbjct: 392 CKKGDVWTGSKLLKEMQRDGYMPS 415
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
I F T+ + P+ T +++ + +S+ ++ + E + + + + F L+ +
Sbjct: 19 MIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILET-KGTQRSDIYVFSGLITAYL 77
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
+ D + ++ + + + + L KL+ +E L G +
Sbjct: 78 ESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLY 137
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
++ ++ F K+G A+ + ++ L P+ + T++ K GD +
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A G P+ T L+ GL SK+ +A EL
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANEL 228
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 175/398 (43%), Gaps = 47/398 (11%)
Query: 26 SILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL 85
SI+ G K L + AALT+ K + I+ + P D + F+ IN
Sbjct: 97 SIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEP----DSIFFNAVINAF 152
Query: 86 SEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHK-LRHS 144
SE+ +Y ++K I YG A E + + + M + + +R +
Sbjct: 153 SESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPN 212
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
+ +N L+ A K+ + V + + G++PD TYN + A+ ++ ++S A I+
Sbjct: 213 LRTYNVLVRAWCNKKNIMKAWNVVYKMVAS-GLQPDAVTYNTIATAYAQNGEASQAEGII 271
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYED------------------------------ 234
EM +++PN + ++ G+ KE K ++
Sbjct: 272 LEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 235 -----VNKVLQMMERYGMKSGVSMYNVRIHSLCK---LRKCAEAKALLDEMLSKGMKPNS 286
VN+VL +ME +G+K V ++ +++ + KC E + D+M+ ++P++
Sbjct: 332 VDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCRE---IFDDMVKARIQPDA 388
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
YS G+ + G E+A++ M SG PN ++ T++ C G E A+ ++
Sbjct: 389 HVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEK 448
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
G PN T ++L+ G A + +++E++ +++E
Sbjct: 449 MCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
Query: 64 AAALTPES-HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
A+ L P++ + +A + A N EA+ GI ++ +P NER I Y +
Sbjct: 241 ASGLQPDAVTYNTIATAYAQN--GEASQAEGIILEMQNSNVQP---NERTCCIIIGGYCK 295
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ A++ M + L+ ++ FN+L+ A D V V + +G+KPD+
Sbjct: 296 EGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT-LMEEFGVKPDVI 354
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
T++ ++ A+ + I +M + I+P+A + L G+ + + E ++L M
Sbjct: 355 TFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM 414
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
+ G V ++ I+ C + A + ++M G+ PN T+ I+G+ +
Sbjct: 415 IKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQP 474
Query: 303 EEAKKFYRIMSNSGLSPNSSVYF 325
++++ +IM + P +
Sbjct: 475 WKSEEVLQIMEEFNVQPEKTTLL 497
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+++ E SIL + KP+ ++ L+A ++ ++ ++ ++ +E
Sbjct: 77 KLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEEN 136
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
GM+ +N I++ + EA +M G KP + T++ I G+ G EE+
Sbjct: 137 GMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEES 196
Query: 306 KKFYRIMS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
+K +MS + + PN Y +V C + A + +A G P+ T ++ T
Sbjct: 197 QKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 365 GLAGASKVSEAKELIGLVKEKFTKNV 390
A + S+A+ G++ E NV
Sbjct: 257 AYAQNGEASQAE---GIILEMQNSNV 279
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E ++ V F+ ++ A + A + + +F + K I+PD Y+ + K + +
Sbjct: 344 MEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKAR-IQPDAHVYSILAKGYVRAG 402
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ A IL M + PN F ++ G+ + E K+ + M G+ + +
Sbjct: 403 EPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFE 462
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + R+ +++ +L M ++P T + G +EA + + N
Sbjct: 463 TLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNE 522
Query: 316 GLS 318
++
Sbjct: 523 EMT 525
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 15/344 (4%)
Query: 41 KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE 100
+TRAAL LL+ K+++ LD + +S I+ + + N E
Sbjct: 190 ETRAALELLRRVDG--KLVQ------------LDVVMYSTIIDSMCKDKNVNDAFDLYSE 235
Query: 101 LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD 160
+ +R N ++ I + + A+ F +M + V FN L+ A
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295
Query: 161 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
KE K K GIKPD+ TYN ++ +C ++ + A SIL M + + S+
Sbjct: 296 VKEAKNGLAMMMKQ-GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYN 354
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ GF K + + K+ + M + V YN I LCK + + A L+D M +
Sbjct: 355 IVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDR 414
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G +P+ +TYS + CK+ ++A + + G+ PN Y ++ +CKGG E A
Sbjct: 415 GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
++ + KG+ T ++ G EA L+ +K+
Sbjct: 475 RNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKD 518
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
++ D+ Y+ +I + C+ + + A+ + +EM + I N ++ AL++GF K +D
Sbjct: 206 VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI 265
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M + V +N+ + + CK + EAK L M+ +G+KP+ VTY+ + G+
Sbjct: 266 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGY 325
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C AK MS+ G++ Y ++ CK + A+ KE K PN
Sbjct: 326 CLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV 385
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T SL+ GL + ++S A ELI L+ ++
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDR 414
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ + +D ++ V ++ ++ ++ K+ + ++ E + I ++ TY+
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV-SRRISSNIVTYS 249
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A + +M ++I P+ +F LV F KE + ++ L MM +
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K + YN + C + + AK++L+ M +G+ +Y+ I GFCK ++A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K ++ M + + PN Y +++ +CK G AL +G P+ T S++
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA 429
Query: 366 LAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
L V +A L+ +K++ + N+ T+ + GL
Sbjct: 430 LCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 37/289 (12%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F +L +L +K Y V +F + + GIKP+ +N +I FC+ A+S+LA++
Sbjct: 73 FGQILGSLVKSKHYHTVLSLFQKM-EYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKI 131
Query: 208 DRKSIKPNASSFGALVAGF-YKEEKYEDVN------------------------------ 236
+ +P+ + + GF K + ++ +N
Sbjct: 132 LKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET 191
Query: 237 -KVLQMMERYG---MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
L+++ R ++ V MY+ I S+CK + +A L EM+S+ + N VTYS
Sbjct: 192 RAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSAL 251
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFC G ++A + M++ ++P+ + +V CK G + A + +G
Sbjct: 252 ISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI 311
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
P+ T SL+ G ++V+ AK ++ + + T V ++N + G
Sbjct: 312 KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
F ++D A S+ + R++ P FG ++ K + Y V + Q ME G+K
Sbjct: 44 TFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKP 103
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+N+ I+ C+L A ++L ++L G +P+++T + FI GFC G +A F+
Sbjct: 104 NFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFH 163
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ G + Y T++ +CK G+ AL + K + +++ +
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 223
Query: 370 SKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
V++A +L +V + + N+ T++ + +G
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 119/265 (44%), Gaps = 5/265 (1%)
Query: 92 NGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
NG++ +++ +PD+ L + NM + + T M + +V ++N +
Sbjct: 301 NGLAMMMKQ-GIKPDIVTYNSLMDGYCLVNEVNMAKSILNT---MSHRGVTATVRSYNIV 356
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ K + ++F E I P++ TYN +I C+S S A ++ M +
Sbjct: 357 INGFCKIKMVDQAMKLFKEMHHK-QIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415
Query: 212 IKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAK 271
+P+ ++ +++ K + +L ++ G++ + Y + I LCK + +A+
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDAR 475
Query: 272 ALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 331
+ +++L KG TY+ I GFC G F+EA M ++ P++ Y ++ +
Sbjct: 476 NIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSL 535
Query: 332 CKGGDYETALGFCKESIAKGWVPNF 356
+ + A +E I +G + +F
Sbjct: 536 FDKDENDKAEKLLREMITRGLLYSF 560
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI+P++ TY +I C+ A +I ++ K +++ ++ GF +
Sbjct: 447 KDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLF 506
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
++ +L M+ Y + I SL + +A+ LL EM+++G+ YS
Sbjct: 507 DEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL-----LYSFL 561
Query: 293 IYG 295
YG
Sbjct: 562 EYG 564
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 19/339 (5%)
Query: 42 TRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEEL 101
T AA+ LL+S C+ + S +D L +++EA FN SQ + +
Sbjct: 186 TSAAIRLLRSMEQGN-----CQPDVVIYTSIIDSLCKD---RQVTEA--FNLFSQMVGQ- 234
Query: 102 KTRPDLQNERFHAHSIILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
PD+ ++ +++ N+ E H +M K+ V F+ ++ AL
Sbjct: 235 GISPDI-----FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEG 289
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
E + ++ G++PD+ TY ++ C S+ A + M RK P+ S+
Sbjct: 290 KVTEAHEI-VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 348
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
L+ G+ K K + + + M R YN ++ LC + + +A AL EM++
Sbjct: 349 TTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVA 408
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
+G P+ VTYS + CK+ + EEA + + S L+P+ VY ++ MC+ G+ E
Sbjct: 409 RGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 468
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
A +KG P+ T ++ GL ++EA +L
Sbjct: 469 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+R + M++ + V + +++ +L + E +F + GI PD+ TY
Sbjct: 186 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ-GISPDIFTYT 244
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ A C + ++L +M I P+ F +V KE K + ++++ MM +
Sbjct: 245 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 304
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G++ V Y + C + EA + D M+ KG P+ ++Y+ I G+CK ++A
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 364
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M P++ Y T++Y +C G + A+ E +A+G +P+ T L+
Sbjct: 365 MYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 424
Query: 366 LAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
L + EA L+ ++ ++ +N I G+
Sbjct: 425 LCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 112 FHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
FH+ S+ N + A+ +F + S+ F LL ++ K Y V + +
Sbjct: 36 FHSKSL----HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 91
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
++G+ P++ T N +I +FC + A+S+LA++ + +P+ ++F L+ G E K
Sbjct: 92 -DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ + M G + V Y I+ LCK+ + A LL M +P+ V Y+
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I CKD EA + M G+SP+ Y ++V+ +C +++ + +
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+P+ ++V L KV+EA E++ ++ ++
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 304
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I+ C A + +M + +PN ++G L+ G K
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 189
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++L+ ME+ + V +Y I SLCK R+ EA L +M+ +G+ P+ TY+ ++
Sbjct: 190 IRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHA 249
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C ++ M NS + P+ ++ T+V +CK G A I +G P+
Sbjct: 250 LCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPD 309
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNV 390
T +L+ G S++ EA ++ +V++ F +V
Sbjct: 310 VVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
F L+ L + E +F + G +P++ TY +I C+ ++S+A +L
Sbjct: 137 TFTTLIRGLCVEGKIGEALHLFDKMIDE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 195
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M++ + +P+ + +++ K+ + + + M G+ + Y +H+LC L +
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
LL++M++ + P+ V +S + CK+G EA + +M G+ P+ Y T
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
++ C + + A+ + KG+ P+ + +L+ G K+ +A L + +++
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375
Query: 386 FTKNVDTWNEIEAGL 400
+ + T+N + GL
Sbjct: 376 WIPDTKTYNTLMYGL 390
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + V + L+ + + E +VF + G PD+ +Y +I +C+
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF-DMMVRKGFAPDVISYTTLINGYCKIH 359
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM RK P+ ++ L+ G + +D + M G + Y+
Sbjct: 360 KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 419
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + SLCK R EA ALL + + + P+ Y+ I G C+ G E A+ + +S+
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 479
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y M++ +CK G A E P+ T ++ G ++ A
Sbjct: 480 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 539
Query: 376 KELI 379
+L+
Sbjct: 540 IQLL 543
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 2/230 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ M E AV+ F M V ++ L+ + +F E + I PD
Sbjct: 323 QSEMDE-AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDT 380
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C A ++ EM + P+ ++ L+ K E+ +L+
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
+E + + +YN+ I +C+ + A+ L + SKG+ P+ TY+ I+G CK G
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
EA K + M + SP+ Y T+ + + A+ +E +A+G
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + + A+ F+EM + +N L+ L ++ +F E G P
Sbjct: 355 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM-VARGQMP 413
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY+ ++ + C++ A ++L ++ ++ P+ + ++ G + + E +
Sbjct: 414 DLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 473
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+ V YN+ IH LCK EA L EM P+ TY+ GF ++
Sbjct: 474 SNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 533
Query: 300 GNFEEAKKFYRIMSNSGLSPNS 321
A + M G S +S
Sbjct: 534 NETLRAIQLLEEMLARGFSADS 555
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 1/272 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ + M E ++H++ ++ ++ KD+ VF + K G
Sbjct: 489 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE-G 547
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +I AFC + A + EM + +P +F ++ G+ K
Sbjct: 548 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 607
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V MM R G V +N I+ L + R+ +A +LDEM G+ N TY+ + G+
Sbjct: 608 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 667
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + N GL + Y ++ CK G ++AL KE A+ N
Sbjct: 668 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 727
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
L+ G A V EA +LI +K++ K
Sbjct: 728 FVYNILIDGWARRGDVWEAADLIQQMKKEGVK 759
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 1/302 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ + S+A + + +E K N + I + Q E A +E
Sbjct: 378 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 437
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + ++ ++ T+ D K+ VF K G P + TY +I + +
Sbjct: 438 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL-KECGFTPTVVTYGCLINLYTKVG 496
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A + M + +K N ++ ++ GF K + + + V + M + GMK V +YN
Sbjct: 497 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 556
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A + EM +P + T+ I+G+ K G+ + + + +M
Sbjct: 557 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 616
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P + ++ + + E A+ E G N T ++ G A +A
Sbjct: 617 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 676
Query: 376 KE 377
E
Sbjct: 677 FE 678
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI + Y+ ++ + +D + + P ++G L+ + K K
Sbjct: 442 GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKA 501
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V ++M+ G+K + Y++ I+ KL+ A A A+ ++M+ +GMKP+ + Y++ I
Sbjct: 502 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISA 561
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC GN + A + + M P + + +++ K GD +L G VP
Sbjct: 562 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 621
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ GL ++ +A E++
Sbjct: 622 VHTFNGLINGLVEKRQMEKAVEIL 645
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D+ TY ++KA C+S SA ++ EM ++I N+ + L+ G+ + +
Sbjct: 687 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 746
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M++ G+K + Y I + K A ++EM + G+KPN TY+ I G
Sbjct: 747 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 806
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD------YETALGFCKESIA 349
+ + E+A Y M G+ P+ +VY ++ + Y + CKE +
Sbjct: 807 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVE 866
Query: 350 KGWVPNFTT 358
G + + T
Sbjct: 867 AGLIVDMGT 875
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 4/278 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+++L+ RP + H Y ++ ++ F M +V FN L+ L
Sbjct: 578 MQKLRHRPTTRTFMPIIHG---YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 634
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ ++ + E G+ + TY ++++ + D+ A+ + + + +
Sbjct: 635 KRQMEKAVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 693
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ AL+ K + + V + M + +YN+ I + EA L+ +M
Sbjct: 694 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 753
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+G+KP+ TY+ FI K G+ A + M G+ PN Y T++ +
Sbjct: 754 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 813
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E AL +E A G P+ L+T L + ++EA
Sbjct: 814 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 851
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 109/268 (40%), Gaps = 4/268 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ YG+ A TF+ M + + + +L+ A + +D E + K G
Sbjct: 314 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM-KEEG 372
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ L TY+ ++ F ++ + +A E R NAS +G ++ + E
Sbjct: 373 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 432
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ ME G+ + +++Y+ + + + + + G P VTY I +
Sbjct: 433 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 492
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G +A + R+M G+ N Y M+ K D+ A ++ + +G P+
Sbjct: 493 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 552
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
++++ G + A I VKE
Sbjct: 553 ILYNNIISAFCGMGNMDRA---IQTVKE 577
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 82/212 (38%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP + ++K + D A M + I P + + +L+ + ++
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 363
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M+ G++ + Y+V + K A DE N+ Y IY C
Sbjct: 364 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 423
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ N E A+ R M G+ ++Y TM+ D + L K G+ P
Sbjct: 424 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 483
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
T L+ K+S+A E+ ++KE+ K+
Sbjct: 484 TYGCLINLYTKVGKISKALEVSRVMKEEGVKH 515
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ +M G++ V Y+V I+ LCK K +A DEML KG+ PN VT++ I G
Sbjct: 198 RLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + AK+ Y+ M + L P+ Y T++Y +CK GD + A + KG P+
Sbjct: 258 CKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 ITYTTLIBGCCKEGDLDSAFE 338
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + + VF K +G++P + + N ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSXNTLMNGYI 188
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE K +D N+ M G+
Sbjct: 189 RLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGV 248
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + AK + +MLS+ + P+ +TY+ IYG CK G+ ++A M
Sbjct: 249 TFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S GL P+ Y T++ CK GD ++A K I + + +L++GL +
Sbjct: 309 SMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRS 368
Query: 373 SEAKELI---------------GLVKEKFTKNVDTW 393
+A++++ ++ +F K D W
Sbjct: 369 VDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVW 404
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 8/275 (2%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE---VKRVFIEFPKTYGIKPDLDTYN 185
A F + + LR SV + N L+ D E +K V + G++PD+ TY+
Sbjct: 161 AQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVML----ASGVQPDVYTYS 216
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C+ S A EM K + PN +F L+ G K + + ++ + M
Sbjct: 217 VLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQ 276
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN I+ LCK +A L+D+M KG+KP+ +TY+ I G CK+G+ + A
Sbjct: 277 SLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSA 336
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ + M + + VY ++ +C+ G A +E ++ P+ T ++
Sbjct: 337 FEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINE 396
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
V + +L+ + ++ +V T+N + G
Sbjct: 397 FCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 60 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 118
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K A L DEML KG+ PN VT++ I G
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 298
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 299 FTYTTLIDGCCKEGDLDTAFE 319
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 146/339 (43%), Gaps = 29/339 (8%)
Query: 83 NKLSEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT------ 132
N+ S+ F+G I+ YLE R ++ R H + + EH ++
Sbjct: 48 NQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLV 107
Query: 133 ---FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++
Sbjct: 108 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMN 166
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ D + + + M ++P+ ++ L+ G KE K + N + M G+
Sbjct: 167 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVP 226
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 286
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
MS GL P+ Y T++ CK GD +TA K I + + +L++GL
Sbjct: 287 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 346
Query: 370 SKVSEAKEL------IGL---------VKEKFTKNVDTW 393
+ +A+++ +GL + +F K D W
Sbjct: 347 GRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVW 385
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 200
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 201 NGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 260
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ +
Sbjct: 261 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 320
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y +V CK
Sbjct: 321 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCK 380
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G P+ T L+ G
Sbjct: 381 KGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 1/302 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
+ + ++ IN+L F+ + ++ L N + + I E A+ F
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 473
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
++M + +V +N L+ + R+ ++ K G +PD TYN ++ F +
Sbjct: 474 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL-LDLMKENGCEPDEWTYNELVSGFSK 532
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
SA EM + PN S+ L+ G K+ K + +L+ ME G V
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN I+ L K + +EA+ + D+M +G+ PN +TY+ I G C++G + A K + M
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PN Y +++Y +C+ G + A KE KG P+ T SL+ G ++
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712
Query: 374 EA 375
A
Sbjct: 713 HA 714
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 37/319 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+I + M E A +K+M ++ S+ FN L+ L+ +E + + + + Y
Sbjct: 212 LIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-YD 270
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ TY +I C + + A+ + M ++ PN+ ++ L+ G E + ++
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLC---------------------------------- 262
+L+ M G++ V Y + I +LC
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390
Query: 263 -KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
+L K A L +ML +G+ PN+VTY+ I C G F A K + M G N+
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
Y ++ +C GGD E A+ ++ + G +P T +L+ G V+ A L+ L
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510
Query: 382 VKEKFTKNVD-TWNEIEAG 399
+KE + + T+NE+ +G
Sbjct: 511 MKENGCEPDEWTYNELVSG 529
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 4/290 (1%)
Query: 114 AHSIILYGQAN--MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+S ++ G N + A+ +EM E + +V + + AL + +E +
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K G +P++ TY +I A + +M ++ + PN ++ AL+ +
Sbjct: 372 KKR-GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+ K+ ME +G + YN I LC +A L ++ML G P VTY+
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G+ GN A + +M +G P+ Y +V K G E+A + +E + G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
PN + +L+ G + KV A L+ ++E NV+++N + GL
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ +Y +I + A S+L M+ PN S+ A++ G KE ++ +
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ M G+ V Y I LC+ + A + +M + PN TYS IYG
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C++G +EA+ + M GL+P+ + +++ G + A + + G PN
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729
Query: 356 FTTMKSLVTGLAGASKVSEAK 376
+ T L+ GL + E K
Sbjct: 730 YRTYSVLLKGLQKECLLLEEK 750
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 26/342 (7%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
+++ IN LS+ N F+ + +++ + L N + I + T+ A + F +M
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
++ K ++ +++L+ L E + + E + G+ PD T+ +I F
Sbjct: 652 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK-GLAPDEVTFTSLIDGFVVLGR 710
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKE---------------------EK---Y 232
A+ +L M KPN ++ L+ G KE EK +
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E V+ +L M G + + Y+ + LC+ + EA+ L+ +M +G P+ Y
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
+ CK+ + A K + + G + S+Y ++ +CK G E A + K W
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTW 393
+ LV GL ++ +L+ +++ K FT N+ T+
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 932
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ TYN +I C S+A I M+ N ++ ++ G E
Sbjct: 410 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 469
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M + G V YN I+ A LLD M G +P+ TY+ + G
Sbjct: 470 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 529
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K G E A +++ M GL+PN Y T++ K G + AL + G PN
Sbjct: 530 FSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+ +++ GL+ ++ SEA+++ + E+ NV T+ + GL
Sbjct: 590 VESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
S L+ K E E + + M G++ + +N I+ L K K EA+ +L ++
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 266
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ P+ TY+ I G C++ N + A + M G PNS Y T++ +C G
Sbjct: 267 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 326
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
+ AL +E I KG P T +T L EA EL+ +K++ + NV T+ +
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 386
Query: 397 EAGL 400
+GL
Sbjct: 387 ISGL 390
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 10/264 (3%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY------GIKPDLDTYNRVIKAF 191
+ K R +N + AL +A D EV VF E +T G P++ YN ++ A
Sbjct: 49 QQKRRRLERDYNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNAL 108
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
E+ A EM + PNASS L+ + +++ +++ + G++ V
Sbjct: 109 AEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD---LAWELIHKSGVEPDV 165
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ I LC+ K EA +LD ML K +P TY+ + +C+DG EAK
Sbjct: 166 GTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAE 225
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G PN Y ++ +C ++ ES K W P+ T + GL K
Sbjct: 226 MERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGK 285
Query: 372 VSEAKELIG-LVKEKFTKNVDTWN 394
EA EL+ ++ E TW+
Sbjct: 286 AKEALELLDVMLGEGLEPTAYTWS 309
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 37/254 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TY+ +I C + A+ +L M K+ +P ++ +V + ++ + +
Sbjct: 160 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 219
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ MER G V YNV I +LC K E + +L E +K KP++VTY+ ++ G
Sbjct: 220 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 279
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNS---------------------------------- 321
CK G +EA + +M GL P +
Sbjct: 280 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 339
Query: 322 -SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y T++ +C+ G + + + I KG PN T L+ L K S AK LI
Sbjct: 340 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH 399
Query: 381 LVKEKFTKNVDTWN 394
+ F NV T+N
Sbjct: 400 SL--GFAANVVTYN 411
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 16/256 (6%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E R V + ++ A E K + E + G P++ TYN +I+A C+
Sbjct: 191 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMER-LGCLPNVVTYNVLIRALCDDD 249
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+L E K KP+ ++ + G K+ K ++ ++L +M G++ ++
Sbjct: 250 KFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWS 309
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ ++ LC + +A LL+ V Y+ + C+ G + K M
Sbjct: 310 ILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKK 369
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------GWVPNFTTMKSLVTGLAGA 369
G+ PN+ + ++ +C GG K S+AK G+ N T L+
Sbjct: 370 GIEPNTRTFNILIRSLCVGG---------KSSLAKSLIHSLGFAANVVTYNILLHWFYYH 420
Query: 370 SKVSEAKELIGLVKEK 385
K++EA LI +++EK
Sbjct: 421 GKLTEANRLISVMEEK 436
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN V+ + CE +L +M +K I+PN +F L+ K ++ +
Sbjct: 343 YNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSL- 401
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN+ +H K EA L+ M K + P+ VTY+ I G C++ F+
Sbjct: 402 --GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFD 459
Query: 304 EAKKFYRIMSNSGLS 318
A + SGLS
Sbjct: 460 AATACFLKSLTSGLS 474
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ + E K V A+N ++ +L ++ + ++ + K GI+P+ T+N +I
Sbjct: 324 AIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKK-GIEPNTRTFNILI 382
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
++ C SS A S++ + N ++ L+ FY K + N+++ +ME +
Sbjct: 383 RSLCVGGKSSLAKSLIHSL---GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIA 439
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN--SVTYSHFIYGFCKDGNFEEAK 306
Y + I LC+ RK A A + L+ G+ + +V + +Y ++
Sbjct: 440 PDEVTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLTVLLNRLVYA-------DKIW 492
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ RI P+ V+ + C+ G
Sbjct: 493 EINRIFDGKDFVPDHHVFDLTIRTFCRVG 521
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILA-----------------EMDRKSIKPNASS 218
G PD+ TYN +IK C S A I+ EM + + PN S
Sbjct: 40 GYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVIS 99
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ +LV GF K E+ ++ M G++ + +NV I LCK K EAK LL+ +
Sbjct: 100 YSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTI 159
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+G+ + VTY+ I GFCK G+ A+K + M + G N Y ++ CK E
Sbjct: 160 QRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVE 219
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
A+ E G PN T +L+TGL KV +A +L G++K
Sbjct: 220 EAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMK 264
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 137/307 (44%), Gaps = 1/307 (0%)
Query: 72 HLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVR 131
H +A I I+ L + + + + EE+K + + N ++ + + A E + R
Sbjct: 59 HRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKR 118
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F EM + ++ ++ FN L+ L E K++ +E GI DL TYN +I F
Sbjct: 119 LFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL-LEVTIQRGIILDLVTYNSLIDGF 177
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ D SSA + M K + N S+ L+ G+ K K E+ + M + G + V
Sbjct: 178 CKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNV 237
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ + L + K +A L M + G+ +S Y F+ G CK+G EA + +
Sbjct: 238 KTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNE 297
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ + + Y ++ +CK G E A F K+ +G PN T ++ G +
Sbjct: 298 LKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQ 357
Query: 372 VSEAKEL 378
V +A L
Sbjct: 358 VDKANIL 364
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY------- 294
M G+ + N+ + LC L + +E A + +L +G P+ VTY+ I
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 295 ----------GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
G CK G+ +EAK+ + M G+ PN Y ++V+ C G E +
Sbjct: 61 ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
E + +G PN L+ L KV EAK+L+ + ++ ++ T+N + G
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDG 176
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 114 AHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
+++I++ G + E A+ + EM + R +V ++ LL L + ++F
Sbjct: 204 SYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLF-GV 262
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K GI D Y + C++ A + E+ + K + S+ L+ G K K
Sbjct: 263 MKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGK 322
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL---LDEMLSKGMKPNSVT 288
E + + + + G++ V N+ IH C++ + +A L +++M G P+ +T
Sbjct: 323 VEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIIT 382
Query: 289 YSHFIYGFCKDGNFEEA 305
Y+ + GFC+ EE
Sbjct: 383 YNTLLRGFCESNKLEEV 399
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 112 FHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF- 168
F ++S ++ G +A E A FK++ + L+ +V N ++ + + +F
Sbjct: 307 FESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFE 366
Query: 169 -IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
+E + G PD+ TYN +++ FCES+ ++L +M ++
Sbjct: 367 KMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 24 ITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 82
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 83 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGF 142
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K +A L DEML KG+ PN VT++ I G
Sbjct: 143 RLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGH 202
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 203 CKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDK 262
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 263 ITYTTLIDGCCKEGNLDTAFE 283
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ F K+ V + ++G++ V YN ++ +L E L ML
Sbjct: 90 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAML 149
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ G++P+ +YS I G CK+ ++A + + M GL+PN + T++ CK G +
Sbjct: 150 ASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVD 209
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFT 387
A+ K +++ +P+ T +L+ GL + +A +LI GL +K T
Sbjct: 210 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKIT 264
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV GFY+E +L+ G + + +N+ +H CK A+++ D + G
Sbjct: 70 LVWGFYEE--------ILEC----GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 117
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++P+ V+Y+ + G+ + G+ +E + M SG+ P+ Y ++ +CK + A
Sbjct: 118 LRPSVVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDAN 177
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
E + KG PN T +L+ G +V A E+ ++ + ++ T+N + GL
Sbjct: 178 ELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 237
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 12/300 (4%)
Query: 108 QNERFHAHSIILYGQA------NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDY 161
QN +++I+L G A +MT+ F M + + FN L+ A
Sbjct: 355 QNPNVFSYTIMLNGYATKGCLVDMTD----LFDLMLGDGIAPDIYTFNVLIKAYANCGML 410
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+ +F E + +G+KPD+ TY VI A C A +M + + P+ ++
Sbjct: 411 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ GF +++ + GM + ++ I++LCKL + +A+ + D ++ G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P +V YS + G+C G E+A + + M ++G+ PN VY T+V CK G + L
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK-ELIGLVKEKFTKNVDTWNEIEAGL 400
+E + KG P+ ++ GL A + AK + + + N T+N + GL
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGL 649
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 141/298 (47%), Gaps = 11/298 (3%)
Query: 105 PDLQNERFHAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
P + + H ++I++ +A+ E A+ F ++ LR ++ N LL AK
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTD 163
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS--IKPNASSFG 220
E + + G PD+ +Y+ ++K+ C+ S A +L M P+ ++
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223
Query: 221 ALVAGFYKEEKYEDVNKVLQM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ GF+KE DVNK + M + G+ Y+ +H+LCK R +A+A L +M
Sbjct: 224 TVIDGFFKEG---DVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQM 280
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
++KG+ PN+ TY++ IYG+ G ++EA + ++ M + P+ ++ +CK G
Sbjct: 281 VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWN 394
+ A KG PN + ++ G A + + +L L + + ++ T+N
Sbjct: 341 KEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFN 398
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD TY+ V+ A C++ A + L +M K + PN ++ L+ G+ ++++
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V + M R+ + V ++ + SLCK K EA+ + D M KG PN +Y+ + G
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ G + + +M G++P+ + ++ G + A+ E G P+
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
T ++++ L K+ +A EKF + +D
Sbjct: 429 VVTYRTVIAALCRIGKMDDA-------MEKFNQMID 457
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 42/322 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y M + A+ F EM +H ++ V + ++ AL + F + G+ P
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAP 462
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAE--------------------------MDRKSI- 212
D Y+ +I+ FC A +++E MD ++I
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 213 --------KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
P A + L+ G+ K E +V M G++ +Y ++ CK+
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
+ E +L EML KG+KP+++ Y+ I G + G AK + M+ SG++ N Y
Sbjct: 583 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 642
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI----- 379
++ + K ++ A+ KE A N T+ +++ G+ +V EAK+L
Sbjct: 643 NIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISR 702
Query: 380 -GLVKEKFTKNVDTWNEIEAGL 400
GLV T ++ N I+ GL
Sbjct: 703 SGLVPCVVTYSIMITNLIKEGL 724
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 7/311 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D +A+S I+ + N +E+ R PD H++ +A + A
Sbjct: 218 DVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC---KARAMDKAE 274
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++M + + +N L+ + +KE RVF E + + I PD+ T + ++ +
Sbjct: 275 AFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTLSMLMGS 333
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ A + M K PN S+ ++ G+ + D+ + +M G+
Sbjct: 334 LCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +NV I + +A + +EM G+KP+ VTY I C+ G ++A + +
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M + G++P+ Y ++ C G A E + G + S++ L
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513
Query: 371 KVSEAKELIGL 381
+V +A+ + L
Sbjct: 514 RVMDAQNIFDL 524
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P Y+ ++ +C A + M I+PN +G LV G+ K + ++
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M + G+K +YN+ I L + + AK EM G+ N TY+ + G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K+ F+EA ++ + + N TM+ M + E A G VP
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T ++T L V EA+++
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDM 731
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+P+ Y ++ +C+ S+ EM +K IKP+ + ++ G ++ +
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
M G+ YN+ + L K R EA L E+ + +K N +T + I G
Sbjct: 624 KVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAG 683
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ EEAK + +S SGL P Y M+ + K G E A G P+
Sbjct: 684 MFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ +V L +++ A + + E+
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYLSKIDER 773
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 134/325 (41%), Gaps = 43/325 (13%)
Query: 98 LEELKTRPDLQNERFHAHSIIL----YGQANMTEHAVRTFKEM-DEHKLRHSVGAFNALL 152
+E+L +R L+N S I+ YG+A++ + AV F M DE + + SV +FN++L
Sbjct: 96 VEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVL 155
Query: 153 LALTIAKDYK---EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
+ Y E + I P+ ++N VIKA C+ A + M
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+ P+ ++ L+ G KEE+ ++ +L M+ G +YNV I LCK
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTR 275
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
L+D M KG PN VTY+ I+G C G ++A M +S PN Y T++
Sbjct: 276 VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Query: 330 FMCKG-----------------------------------GDYETALGFCKESIAKGWVP 354
+ K G E A+ ++ KG P
Sbjct: 336 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 395
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N LV GL K +EAKE++
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEIL 420
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 126/300 (42%), Gaps = 1/300 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
L+F++ I L + + + + + R L + + + + + AV E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M S +N L+ L D V + ++ G P+ TYN +I C
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK-LVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A S+L M PN ++G L+ G K+ + D ++L ME G +Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
V I L K K EA +L +M KG KPN V YS + G C++G EAK+ M S
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G PN+ Y +++ K G E A+ KE G N L+ GL G +V EA
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AVR M+E + ++ L+ L +E ++ + + G KP++ Y+ ++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLV 404
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C + A IL M PNA ++ +L+ GF+K E+ +V + M++ G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y+V I LC + + EA + +ML+ G+KP++V YS I G C G+ + A K
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 309 YRIM---SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
Y M P+ Y ++ +C D A+ + +G P+ T + +
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 366 LAGAS 370
L+ S
Sbjct: 585 LSEKS 589
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 20/278 (7%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ ++ L N + L + L N ++ + + + + E AV+ +KE
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
MD+ + ++ L+ L KE V+ + T GIKPD Y+ +IK C
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM-LTIGIKPDTVAYSSIIKGLCGIG 516
Query: 196 DSSSAYSILAEM---DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+A + EM + +P+ ++ L+ G ++ +L M G V
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVI 576
Query: 253 MYNVRIHSLC-KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
N +++L K C + ++ L+E++ + +K V+ G C +
Sbjct: 577 TCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS------GAC---------TIVEV 621
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
M L+P +S + +V +CK A+ C ++
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLC 659
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M E ++ V FNAL+ A E +++ E I PD TYN +I
Sbjct: 134 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMI 192
Query: 189 KAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
FC+ + D+ + ++A P+ +F ++ + + ++ ++ ++L+ + R
Sbjct: 193 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ + + YN IH C++ A+ L EM+S G+ P+++T + +YGFC++ EEA
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVT 364
+ + ++ S + ++ Y +++ MCKG + A FC I G P+ T +++
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGVEPDVQTYNVMIS 364
Query: 365 GLAGASKVSEAKELIGLVKE 384
G G S +S+A L +K+
Sbjct: 365 GFCGKSAISDANVLFHKMKD 384
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P + T+N +I C A +++ +M K + + ++G +V G K +
Sbjct: 5 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +K V +Y+ I LCK ++A+ L EML KG+ PN TY+ I G
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC G + +A++ R M ++P+ + ++ K G A C E + + P+
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
T S++ G ++ +AK + L+ + +V T+N I
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTI 222
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V FN ++ AK E ++ E + G+ + TYN +I FCE + ++A +
Sbjct: 215 DVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDL 273
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM + P+ + L+ GF + EK E+ ++ ++++ + YN+ IH +CK
Sbjct: 274 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 333
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K EA L + G++P+ TY+ I GFC +A + M ++G P++S
Sbjct: 334 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 393
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
Y T++ K G+ + ++ E + G+ + T+K
Sbjct: 394 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 430
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G+ V +N I+ LC + EA AL+++M+ KG+ + VTY + G CK G+
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+ A M + + P+ +Y ++ +CK G + A E + KG PN T
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
++ G + S+A+ L+ +++ + +V T+N +
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 156
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 142/327 (43%), Gaps = 16/327 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYG-------QANMTEH 128
++SI I L + ++ L E+ + H +++ YG + +
Sbjct: 88 FSYSILIAGLCRGQKVDEAAELLNEMI-------DGGHQPNVVTYGSLLSGLCKMGKLKE 140
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
AV F M +N L+ + D E R+F E + G P + TYN ++
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSLL 199
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F + S+ +M R+ PN +F L+ GF K + +++ M G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN + +C K EA+ LL EM+ G+ P+ V+Y+ I G+ K G + A K
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + SGL P++ Y T++ +C+ G A K+ IA G P+ + LV GL
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 369 ASKVSEAKELI-GLVKEKFTKNVDTWN 394
+++E+ EL +VK + + +N
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYN 406
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
+YN +++ +S Y +M PN ++G L+ + +++E+ V + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
G V Y++ I LC+ +K EA LL+EM+ G +PN VTY + G CK G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
+EA + M G P+ VY ++ K GD A +E + KG +P T SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 363 VTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
++G + + + L ++++ N+ T+N + G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 2/274 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ +H T+ +M + + LL +L A+ ++E + VF G P++
Sbjct: 29 KSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM-AAQGCSPNV 87
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+Y+ +I C A +L EM +PN ++G+L++G K K ++ +
Sbjct: 88 FSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSR 147
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G +YNV I K EA L +EML KG P TY+ + GF + G
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGE 207
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
F + ++ M G PN + ++ CK GD A E + G P+ + +
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
L+ G+ K EA+ L+ +++ ++ ++N
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYN 301
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
QA E A F+ M +V +++ L+ L + E + E G +P++
Sbjct: 64 QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG-GHQPNV 122
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TY ++ C+ A + + M + P+ + L+ GF K+ + ++ +
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V YN + + + ++L +ML +G PN T+++ + GFCK G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
EA + + M + G P+ Y T++ MC G A +E I G P+ +
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 362 LVTGLAGASKVSEAKEL 378
L+ G + + + A +L
Sbjct: 303 LIDGYSKSGALDHAIKL 319
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
FK+M ++ FN LL D E R+F+E ++ G PD+ +YN +++ C
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLMRGMC 273
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A +L EM R + P+ S+ L+ G+ K + K+ + + G++
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y+ I LC+ K A + +M++ G P++ + G C+ E+ + ++ M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
P Y ++Y +CK + E +G+ P+ K ++ L
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%)
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
G YN + L K +C ++ML G PN+ TY + + C+ FEEA+ +
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
R M+ G SPN Y ++ +C+G + A E I G PN T SL++GL
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 370 SKVSEAKEL 378
K+ EA +L
Sbjct: 136 GKLKEAVDL 144
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+++Y++ + K G + Y M +G PN+ Y ++ +C+ +E A
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ A+G PN + L+ GL KV EA EL+ ++ NV T+ + +GL
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 154/326 (47%), Gaps = 9/326 (2%)
Query: 64 AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQA 123
A ++PE++ ++ I L ++ F + +++ + NE + Y +A
Sbjct: 144 VAGVSPETY----TLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
++ A+ M ++ + +N L+ + +E +R+ +E + G+ PD+ T
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERL-VERMREDGLFPDVVT 258
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKS----IKPNASSFGALVAGFYKEEKYEDVNKVL 239
+N I A C + A I +M +PN ++F ++ GF KE E+ ++
Sbjct: 259 FNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLV 318
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M+R G + YN+ + L + K EA+ L EM+ KG++PN +++ + G CK+
Sbjct: 319 ESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKN 378
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +A+ +M +SG+ P++ Y T+++ C G A E + +G PN T
Sbjct: 379 GLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTC 438
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
L+ L ++ EA++L+ + E+
Sbjct: 439 NILLHSLWKEGRIFEAEKLLQKMNER 464
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PDL TY+ +I C++ A EM KS+ P++ + + F K K +V
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ ME+ G + YN I L + E LLD+M KG+ PN TY++ I C+
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-------YETALGFC--KESIA 349
G ++A M G+SPN S + ++ CK D +E AL C KE++
Sbjct: 646 GGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEAL- 704
Query: 350 KGWVPNFTTM-KSLVTGLAGASKVSEAKEL 378
++ M L+ G +VSEAKEL
Sbjct: 705 ------YSLMFNELLIG----GEVSEAKEL 724
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 16/269 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL------YGQANMTE 127
D + +SI IN L +A + E K ++ + H SII + +
Sbjct: 527 DLITYSIIINGLCKAGRLD------EARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKIS 580
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A R K+M++ S+ +N+L+L L E+ + + K GI P++ TYN +
Sbjct: 581 SAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDM-KEKGITPNICTYNNM 639
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM-MERYG 246
I CE A S+L EM +K I PN SSF L+ F K + V +V ++ + G
Sbjct: 640 ISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICG 699
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K ++Y++ + L + +EAK L D L + + Y+ I CKD E A
Sbjct: 700 HKE--ALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENAS 757
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M + G + + + ++ + K G
Sbjct: 758 DILHKMIDKGYRFDPASFMPVIDGLGKRG 786
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
++ ++ L A E ++ FIE + PD Y+ I +FC+ SSA+ +L +M
Sbjct: 531 YSIIINGLCKAGRLDEARKKFIEMVGK-SLHPDSIIYDTFIHSFCKHGKISSAFRVLKDM 589
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+++ + ++ +L+ G + + ++ +L M+ G+ + YN I LC+ +
Sbjct: 590 EKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRI 649
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF------------------------- 302
+A +LLDEML KG+ PN ++ I FCK +F
Sbjct: 650 KDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMF 709
Query: 303 ---------EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
EAK+ + + + Y ++ +CK E A + I KG+
Sbjct: 710 NELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYR 769
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI---------GLVKEKFTKNVDTWN 394
+ + ++ GL K +A EL G+V+ K T+N +N
Sbjct: 770 FDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRNESAFN 819
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 125/320 (39%), Gaps = 65/320 (20%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGI-KPDLD 182
E A R + M E L V FN+ + AL A E R+F ++ + G+ +P++
Sbjct: 237 NEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNIT 296
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDR--------------------------------- 209
T+N +++ FC+ A +++ M R
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEM 356
Query: 210 --KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
K I+PN SF ++ G K D ++ +M G+ Y+ +H C K
Sbjct: 357 VDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKV 416
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
+A +L EM+ +G PN+ T + ++ K+G EA+K + M+ ++ +
Sbjct: 417 LKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIV 476
Query: 328 VYFMCKGGDYETALGFCK-----------------------ESIAKGWVPNFTTMKSLVT 364
+ +CK G + A+ + S K +P+ T ++
Sbjct: 477 IDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIIN 536
Query: 365 GLAGASKVSEAK----ELIG 380
GL A ++ EA+ E++G
Sbjct: 537 GLCKAGRLDEARKKFIEMVG 556
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 4/205 (1%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P + YN V+++ S + +M + P + L+AG ++ED +V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
M G + + + + C+ A LLD M S G++PN V Y+ I FC+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD-YETALGFCKESIAKGW---VP 354
+G EEA++ M GL P+ + + + +C G E + F I + P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI 379
N TT ++ G + EAK L+
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLV 318
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 124/346 (35%), Gaps = 100/346 (28%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALT---IAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
A KEM + + ++ +FN ++ L + D + + + I + GI PD TY+
Sbjct: 349 AQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMI----SSGIGPDTVTYS 404
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL----------------------- 222
++ C + A +IL EM R+ PN + L
Sbjct: 405 TLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNER 464
Query: 223 ------------VAGFYKEEKYEDVNKVLQMMERYGMKS--------------------- 249
+ G K K ++ ++++ M +G +
Sbjct: 465 SYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKC 524
Query: 250 --GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA-- 305
+ Y++ I+ LCK + EA+ EM+ K + P+S+ Y FI+ FCK G A
Sbjct: 525 LPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFR 584
Query: 306 ---------------------------KKFYRI------MSNSGLSPNSSVYFTMVYFMC 332
+ + I M G++PN Y M+ +C
Sbjct: 585 VLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLC 644
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+GG + A E + KG PN ++ + L+ AS KE+
Sbjct: 645 EGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEV 690
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V +YN+ + S + K L +M+ G+ P + T + I G C G FE+A++ +
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFD 175
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G PN + +V C+ G AL + G PN +L++
Sbjct: 176 KMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREG 235
Query: 371 KVSEAKELIGLVKE 384
+ EA+ L+ ++E
Sbjct: 236 RNEEAERLVERMRE 249
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 10/264 (3%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY------GIKPDLDTYNRVIKAF 191
+ K R +N + AL +A D EV VF E +T G P++ YN ++ A
Sbjct: 45 QQKRRRLERDYNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNAL 104
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
E+ A EM + PNASS L+ + +++ +++ + G++ V
Sbjct: 105 AEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD---LAWELIHKSGVEPDV 161
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y+ I LC+ K EA +LD ML K +P TY+ + +C+DG EAK
Sbjct: 162 GTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAE 221
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G PN Y ++ +C ++ ES K W P+ T + GL K
Sbjct: 222 MERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGK 281
Query: 372 VSEAKELIG-LVKEKFTKNVDTWN 394
EA EL+ ++ E TW+
Sbjct: 282 AKEALELLDVMLGEGLEPTAYTWS 305
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 37/254 (14%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++PD+ TY+ +I C + A+ +L M K+ +P ++ +V + ++ + +
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ MER G V YNV I +LC K E + +L E +K KP++VTY+ ++ G
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNS---------------------------------- 321
CK G +EA + +M GL P +
Sbjct: 276 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 322 -SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y T++ +C+ G + + + I KG PN T L+ L K S AK LI
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH 395
Query: 381 LVKEKFTKNVDTWN 394
+ F NV T+N
Sbjct: 396 SL--GFAANVVTYN 407
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 16/256 (6%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E R V + ++ A E K + E + G P++ TYN +I+A C+
Sbjct: 187 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMER-LGCLPNVVTYNVLIRALCDDD 245
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+L E K KP+ ++ + G K+ K ++ ++L +M G++ ++
Sbjct: 246 KFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWS 305
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ ++ LC + +A LL+ V Y+ + C+ G + K M
Sbjct: 306 ILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKK 365
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK------GWVPNFTTMKSLVTGLAGA 369
G+ PN+ + ++ +C GG K S+AK G+ N T L+
Sbjct: 366 GIEPNTRTFNILIRSLCVGG---------KSSLAKSLIHSLGFAANVVTYNILLHWFYYH 416
Query: 370 SKVSEAKELIGLVKEK 385
K++EA LI +++EK
Sbjct: 417 GKLTEANRLISVMEEK 432
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
YN V+ + CE +L +M +K I+PN +F L+ K ++ +
Sbjct: 339 YNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSL- 397
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN+ +H K EA L+ M K + P+ VTY+ I G C++ F+
Sbjct: 398 --GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFD 455
Query: 304 EAKKFYRIMSNSGLS 318
A + SGLS
Sbjct: 456 AATACFLKSLTSGLS 470
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ + E K V A+N ++ +L ++ + ++ + K GI+P+ T+N +I
Sbjct: 320 AIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKK-GIEPNTRTFNILI 378
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
++ C SS A S++ + N ++ L+ FY K + N+++ +ME +
Sbjct: 379 RSLCVGGKSSLAKSLIHSL---GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIA 435
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN--SVTYSHFIYGFCKDGNFEEAK 306
Y + I LC+ RK A A + L+ G+ + +V + +Y ++
Sbjct: 436 PDEVTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLTVLLNRLVYA-------DKIW 488
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+ RI P+ V+ + C+ G
Sbjct: 489 EINRIFDGKDFVPDHHVFDLTIRTFCRVG 517
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 148/344 (43%), Gaps = 39/344 (11%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL--YGQANMTEHAVRTFK 134
A+ I L++ + + + ++ + L E F II+ Y +A E AV TF
Sbjct: 58 AYHSMIESLAKIRQYQMVWDLVNAMRNKEILNVEAF---CIIMRKYARAQKVEEAVYTFN 114
Query: 135 EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF-------IEFPKTY------------ 175
M+++ ++ +V AFN LL AL +K+ ++ + +F + KTY
Sbjct: 115 VMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPN 174
Query: 176 --------------GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
G PD TY+ ++ C++ A I+ EMD + KP++ +
Sbjct: 175 LPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSV 234
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
LV + E + ED MER G+ + V+ YN I + CK K +L +M KG
Sbjct: 235 LVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKG 294
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ PNS T + I G +EA K +R M P+ Y ++ C + + AL
Sbjct: 295 VNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMAL 353
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K K +VP+ T L+ GL ++A L+ + EK
Sbjct: 354 KIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEK 397
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +SI ++ L +A + + ++E+ + ++ + YG N E AV TF
Sbjct: 193 DEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTF 252
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM+ + + V A+NAL+ A A K V RV + G+ P+ T N +I +
Sbjct: 253 LEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDM-DLKGVNPNSRTCNIIINSLIG 311
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++ A+ I M K +P+ S+ ++ F ++ + K+ + M++ +
Sbjct: 312 RGETDEAFKIFRRMI-KVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHT 370
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
++V I+ LC++ +A LL+EM+ KG++P+ T+ + K+G
Sbjct: 371 FSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEG 417
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +SI I A + E+ + +E ++ + + +A + AV
Sbjct: 158 DSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIV 217
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEMD + + S ++ L+ + ++ F+E + G+ D+ YN +I AFC+
Sbjct: 218 KEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERN-GVMADVAAYNALISAFCK 276
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
++ + Y +L +MD K + PN+ + ++ + ++ K+ + M + + V
Sbjct: 277 ANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVC-EPDVDS 335
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + I C ++ A + M K P+ T+S I G C+ GN +A M
Sbjct: 336 YTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMI 395
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
G+ P+ + + + + + K G + L F +E +
Sbjct: 396 EKGIRPSGATFGRLRHLLIKEGRKDV-LKFLQEKM 429
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 111/253 (43%), Gaps = 2/253 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V AF ++ A+ +E F K Y +KP++ +N ++ A C+S + A I
Sbjct: 89 NVEAFCIIMRKYARAQKVEEAVYTFNVMEK-YNMKPNVAAFNGLLSALCKSKNVRKAQEI 147
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M + + P++ ++ L+ G+ + ++ + M G Y++ + LCK
Sbjct: 148 FDNMKDQFV-PDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCK 206
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ EA ++ EM KP+S YS ++ + + E+A + M +G+ + +
Sbjct: 207 AGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAA 266
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
Y ++ CK + K+ KG PN T ++ L G + EA ++ +
Sbjct: 267 YNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMI 326
Query: 384 EKFTKNVDTWNEI 396
+ +VD++ I
Sbjct: 327 KVCEPDVDSYTMI 339
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M E ++ V FNAL+ A E +++ E I PD TYN +I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMI 408
Query: 189 KAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
FC+ + D+ + ++A P+ +F ++ + + ++ ++ ++L+ + R
Sbjct: 409 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ + + YN IH C++ A+ L EM+S G+ P+++T + +YGFC++ EEA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVT 364
+ + ++ S + ++ Y +++ MCKG + A FC I G P+ T +++
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGVEPDVQTYNVMIS 580
Query: 365 GLAGASKVSEAKELIGLVKE 384
G G S +S+A L +K+
Sbjct: 581 GFCGKSAISDANVLFHKMKD 600
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 17/282 (6%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE--------VKRVFIEFPKTY----- 175
++ TF ++ + + V FN LL L + E V+ F+E +
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 176 -GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
G+ P + T+N +I C A +++ +M K + + ++G +V G K +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+L ME +K V +Y+ I LCK ++A+ L EML KG+ PN TY+ I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
GFC G + +A++ R M ++P+ + ++ K G A C E + + P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
+ T S++ G ++ +AK + L+ + +V T+N I
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTI 438
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V FN ++ AK E ++ E + G+ + TYN +I FCE + ++A +
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
EM + P+ + L+ GF + EK E+ ++ ++++ + YN+ IH +CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA L + G++P+ TY+ I GFC +A + M ++G P++S Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
T++ K G+ + ++ E + G+ + T+K
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG------------- 300
+N+ I C K + + + ++ G +P+ VT++ ++G C +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 301 --NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
F EA + M GL+P + T++ +C G A + + KG + T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
++V G+ A L+ ++E K
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N LL L A +E V + G P+ +Y+ V+KA C++S S A +L M
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 209 RK--SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
++ + P+ ++ ++ GF+ E + + M R G+K V YN+ I +LCK R
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+A+ +L +M + G +P++VTYS I+G+ G +EA K +R M GL PN +
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+ +CK G + A F AKG P+ + +L+ G A + ++IGL
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFA---DMIGL 427
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+KPD+ TYN +I A C++ A +L +M +P+ ++ ++ G+ + ++
Sbjct: 295 GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEA 354
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ + M++ G+ + N + SLCK + EA D M +KG KP+ +Y ++G
Sbjct: 355 AKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHG 414
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ +G F + + M ++G++ N V+ +++ K G + A+ E +G P+
Sbjct: 415 YASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPD 474
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T ++++ + ++++A E +V N ++ I G
Sbjct: 475 VVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE ++F E K G+ P++ T N + + C+ S A M K KP+ S+
Sbjct: 352 KEAAKMFREMKKR-GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G+ E + D+ + M+ G+ + ++ + IH+ K +A + EM +G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
+ P+ VTYS I F + G +A + + M G+ PN++VY +++ C G A
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530
Query: 342 GFCKESIAKGWV-PNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
E I KG P+ S++ L +V +A ++ L + + V T+N + G
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDG 590
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 134 KEMDEHKL---------RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
+ MD H + R V FN+L+ + + ++ ++ + G++PD+ TY
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI-LDAMEVVGVEPDIVTY 619
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ + ++ + ++ EM RK +KPN ++G ++AG ++ + K M
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G VS+Y + + LC+ EA L ++ + +K + + I K EE
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
AK+ + +S SGL PN S Y M+ + K G E A G VP + ++
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIR 799
Query: 365 GLAGASKVSEAKELIGLVKEK 385
L ++++A + V K
Sbjct: 800 MLLEKGEIAKAGNYLSKVDGK 820
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 4/297 (1%)
Query: 104 RPDLQNERFHAHSII-LYGQANMTEHAVRTF-KEMDEHKLRHSVGAFNALLLALTIAKDY 161
R L+ ++ A++++ AN TE AV M E + +++ +L AL
Sbjct: 185 RTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMS 244
Query: 162 KEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFG 220
+ + K G PD+ Y+ VI F ++ A S+ EM R+ +KP+ ++
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304
Query: 221 ALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 280
++ K + VL+ M G + Y+ IH L + EA + EM +
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G+ PN VT + F+ CK G +EA +F+ M+ G P+ Y T+++ G +
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADM 424
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
+G + G N L+ A V +A + ++++ + +V T++ +
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 148/368 (40%), Gaps = 46/368 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANM--TEH 128
D + +++ I+ L +A + L ++ T +PD +S +++G A + +
Sbjct: 299 DVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT-----YSCMIHGYATLGRLKE 353
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP---------------- 172
A + F+EM + L ++ N+ L +L KE F
Sbjct: 354 AAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLH 413
Query: 173 ------------------KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
K+ GI + + +I A+ + A I EM ++ + P
Sbjct: 414 GYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSP 473
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+ ++ +++ F + + D + M G++ ++Y+ I C +AK L+
Sbjct: 474 DVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELV 533
Query: 275 DEMLSKGM-KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
EM++KG+ +P+ V +S I CKDG +A + + ++ G P + +++ C
Sbjct: 534 SEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCL 593
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDT 392
G + A G P+ T +L+ G ++++ L ++ K K N T
Sbjct: 594 VGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 393 WNEIEAGL 400
+ + AGL
Sbjct: 654 YGIMLAGL 661
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 132/331 (39%), Gaps = 45/331 (13%)
Query: 113 HAHSIIL--YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE 170
H +I++ Y + M + A+ F EM + + V ++ ++ + + F +
Sbjct: 441 HVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQ 500
Query: 171 FPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI------------------ 212
GI+P+ Y+ +I+ FC A +++EM K I
Sbjct: 501 M-VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559
Query: 213 ------------------KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+P +F +L+ G+ K + K+L ME G++ + Y
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
N + K + + L EM KG+KPN+VTY + G + G A+K + M
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
SG + S+Y ++ +C+ + A+ ++ + T + +++ + + E
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739
Query: 375 AKELI------GLVKEKFTKNVDTWNEIEAG 399
AKEL GL+ + T V N ++ G
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDG 770
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 115 HSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ I+L G +A T A + F EM E +V + +L L E +F +
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL- 712
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
T +K + N +I A + A + A + + PN S++G ++ K+
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGV 772
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
ED N + ME+ G+ G + N I L + + A+A L ++ K + + T S
Sbjct: 773 EDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLM 832
Query: 293 IYGFCKDGNFEEAKKF 308
+ F + G ++E K
Sbjct: 833 LSLFSRKGKYQEDIKL 848
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M E ++ V FNAL+ A E +++ E I PD TYN +I
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMI 403
Query: 189 KAFCESS---DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
FC+ + D+ + ++A P+ +F ++ + + ++ ++ ++L+ + R
Sbjct: 404 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ + + YN IH C++ A+ L EM+S G+ P+++T + +YGFC++ EEA
Sbjct: 457 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 516
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVT 364
+ + ++ S + ++ Y +++ MCKG + A FC I G P+ T +++
Sbjct: 517 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGVEPDVQTYNVMIS 575
Query: 365 GLAGASKVSEAKELIGLVKE 384
G G S +S+A L +K+
Sbjct: 576 GFCGKSAISDANVLFHKMKD 595
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT---------YGIKP 179
++ TF ++ + + V FN LL L + E +F +T G+ P
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T+N +I C A +++ +M K + + ++G +V G K + +L
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ME +K V +Y+ I LCK ++A+ L EML KG+ PN TY+ I GFC
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G + +A++ R M ++P+ + ++ K G A C E + + P+ T
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
S++ G ++ +AK + L+ + +V T+N I
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTI 433
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V FN ++ AK E ++ E + G+ + TYN +I FCE + ++A +
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLF 485
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
EM + P+ + L+ GF + EK E+ ++ ++++ + YN+ IH +CK
Sbjct: 486 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 545
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA L + G++P+ TY+ I GFC +A + M ++G P++S Y
Sbjct: 546 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 605
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
T++ K G+ + ++ E + G+ + T+K
Sbjct: 606 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 641
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ I C K + + + ++ G +P+ VT++ ++G C + EA + M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 314 NS----------GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+ GL+P + T++ +C G A + + KG + T ++V
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263
Query: 364 TGLAGASKVSEAKELIGLVKEKFTK 388
G+ A L+ ++E K
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIK 288
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 105/201 (52%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP++ Y+ ++ C+ S A ++ +EM+ K ++PN ++ L+ G ++++
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGS 273
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+L M + GM+ + M N+ + + CK K +AK+++ M+ G P+ TY+ I+ +C
Sbjct: 274 LLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
EA + + +M + G P+ V+ ++++ CK + A+ +E G+VP+
Sbjct: 334 LQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVA 393
Query: 358 TMKSLVTGLAGASKVSEAKEL 378
T +L+ G A + AKEL
Sbjct: 394 TWTTLIGGFCQAGRPLAAKEL 414
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 107/262 (40%)
Query: 121 GQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
G+ + A+ F+ M K SV F LL A+ K Y + + GI+ D
Sbjct: 52 GKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEAD 111
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
T N VI C + +S+L M + ++P + L+ G + +
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
ME+ V Y V I+ LCK A L +M + KPN V YS + G CKDG
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDG 231
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
EA M+ G+ PN Y ++ +C G ++ A E + G P+ +
Sbjct: 232 LVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLN 291
Query: 361 SLVTGLAGASKVSEAKELIGLV 382
LV KV +AK +IG +
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFM 313
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 8/288 (2%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNA 150
G++ ++E++ D+ + + +++ G + T AV ++M+E + +V ++
Sbjct: 168 GLADHMEKMWYPLDV-----YTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYST 222
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ L E + E G++P+L TY +I+ C A S+L EM +
Sbjct: 223 IMDGLCKDGLVSEALNLCSEM-NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKM 281
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
++P+ LV F KE K V+ M G V YN IH C K EA
Sbjct: 282 GMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEA 341
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ M+S+G P+ V ++ I+G+CKD N +A MS G P+ + + T++
Sbjct: 342 MRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGG 401
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
C+ G A G VPN T ++ GL + +SEA L
Sbjct: 402 FCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSL 449
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY +I C++ D+ +A L +M+ ++ KPN + ++ G K+ + +
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
M G++ + Y I LC + EA +LLDEM+ GM+P+ + + FCK+
Sbjct: 241 SEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKE 300
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G +AK M +G P+ Y ++++ C A+ +++G +P+
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVF 360
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGLPQ 402
SL+ G +++A L+ + K F +V TW + G Q
Sbjct: 361 TSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQ 404
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 11/311 (3%)
Query: 73 LDRLAFSIAINKLSEAN---YFNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTE 127
LD + + IN L + G + +EE +P++ +S I+ G + +
Sbjct: 180 LDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVV-----VYSTIMDGLCKDGLVS 234
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ EM+ +R ++ + L+ L +KE + E K G++PDL N +
Sbjct: 235 EALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMK-MGMRPDLQMLNIL 293
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ AFC+ A S++ M P+ ++ +L+ + + K + +V +M G
Sbjct: 294 VDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGR 353
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ ++ IH CK + +A LL+EM G P+ T++ I GFC+ G AK+
Sbjct: 354 LPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKE 413
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M G PN ++ +CK A+ K N L+ G+
Sbjct: 414 LFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMC 473
Query: 368 GASKVSEAKEL 378
A K++ A EL
Sbjct: 474 SAGKLNAAWEL 484
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 4/288 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+ ++ RPDLQ + G+ M +V F + V +N+L+ +
Sbjct: 278 MMKMGMRPDLQMLNILVDAFCKEGKV-MQAKSVIGFMILTGEG--PDVFTYNSLIHIYCL 334
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
E RVF + G PD+ + +I +C+ + + A +L EM + P+ +
Sbjct: 335 QNKMNEAMRVF-HLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVA 393
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ GF + + ++ M +YG + V + LCK +EA +L M
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAM 453
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+ N V YS + G C G A + + + GL N +Y M+ +CK G
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSL 513
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ A G +PN T V GL +++ + + + ++++K
Sbjct: 514 DKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDK 561
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 117/299 (39%), Gaps = 5/299 (1%)
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
RP+L + +G+ + A EM + +R + N L+ A
Sbjct: 248 VRPNLVTYACLIQGLCNFGRW---KEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVM 304
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGAL 222
+ K V I F G PD+ TYN +I +C + + A + M + P+ F +L
Sbjct: 305 QAKSV-IGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSL 363
Query: 223 VAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
+ G+ K++ +L+ M + G V+ + I C+ + AK L M G
Sbjct: 364 IHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQ 423
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
PN T + + G CK+ EA + M S L N +Y ++ MC G A
Sbjct: 424 VPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWE 483
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEKFTKNVDTWNEIEAGL 400
KG N ++ GL + +A++ LI + + N T+N GL
Sbjct: 484 LFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGL 542
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ +EM + V + L+ A K +F+ K YG P+L T ++
Sbjct: 376 AMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHK-YGQVPNLQTCAVIL 434
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + S A S+ M++ ++ N + L+ G K ++ + G++
Sbjct: 435 DGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQ 494
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V +Y + I LCK +A+ LL M G PN+ TY+ F+ G + K+
Sbjct: 495 INVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKY 554
Query: 309 YRIMSNSGLSPNSSVY-FTMVYFMCKGGD 336
IM + G S +++ F + Y GD
Sbjct: 555 LTIMRDKGFSVDAATTEFIINYLSTNEGD 583
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 9/296 (3%)
Query: 113 HAHSIILYG-------QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK 165
H I+ +G + + A+ F M E +V +N ++ L +K
Sbjct: 147 HEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+ + GI+PD TYN +I C S A +++ M ++ I P+ +F AL+
Sbjct: 207 DLLNRM-EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
KE + + ++ + M R + + Y++ I+ LC + EA+ + M+SKG P+
Sbjct: 266 CVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPD 325
Query: 286 SVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCK 345
VTYS I G+CK E K + MS G+ N+ Y ++ C+ G A K
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFK 385
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ G PN T L+ GL K+ +A ++ + K ++ T+N I G+
Sbjct: 386 WMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGM 441
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 1/259 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ ++ F M + + S+ F+ LL A++ K Y V ++ E + GI +L T N
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW-EQMQMLGIPHNLCTCNI 121
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ FC S S A S L +M + +P+ +FG+L+ GF + ++ D + M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +YN I LCK ++ A LL+ M G++P++VTY+ I G C G +++A
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M+ + P+ + ++ K G A +E I + P+ T L+ GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 367 AGASKVSEAKELIGLVKEK 385
S++ EA+++ G + K
Sbjct: 302 CMYSRLDEAEQMFGFMVSK 320
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ ++A+ M+ +R +N+L+ L + + + R+ K I PD+
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKR-EIYPDV 256
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
T+N +I A + S A + EM R+S+ P+ ++ L+ G + ++ ++
Sbjct: 257 FTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGF 316
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M G V Y++ I+ CK +K L EM +G+ N+VTY+ I G+C+ G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A++ ++ M G+ PN Y +++ +C G E AL + G + T
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 362 LVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
++ G+ A +V++A +L L + T ++ T+ + GL
Sbjct: 437 IIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 3/259 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A R M + ++ V FNAL+ A E + ++ E + + PD+ TY+
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR-SLDPDIVTYSL 296
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C S A + M K P+ ++ L+ G+ K +K E K+ M + G
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y V I C+ K A+ + M+ G+ PN +TY+ ++G C +G E+A
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTG 365
M SG+ + Y ++ MCK G+ A +C ++ KG P+ T +++ G
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNL-KGLTPDIWTYTAMMLG 475
Query: 366 LAGASKVSEAKELIGLVKE 384
L EA L +KE
Sbjct: 476 LYKKGLRGEADALFRKMKE 494
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++EM L + ++ L+ L + E +++F F + G PD+ TY+ +I +C
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF-GFMVSKGCFPDVVTYSILINGYC 337
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM ++ + N ++ L+ G+ + K ++ + M G+ +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNII 397
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YNV +H LC K +A +L +M GM + VTY+ I G CK G +A Y +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL 457
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ GL+P+ Y M+ + K G A ++ G +PN
Sbjct: 458 NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ + F L++ K +KY+ V + + M+ G+ + N+ ++ C+ + + A +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L +M+ G +P+ VT+ + GFC+ +A + M G PN +Y T++ +CK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
+ AL G P+ T SL++GL + + +A ++ + K + +V T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 393 WNEI 396
+N +
Sbjct: 259 FNAL 262
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 175 YGI--KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
YGI KP + +Y+ +I A C+ A + EM + + P S+ +L+ +
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------W 285
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E+ ++ M G++ V +NV I LCK K EAK LL+ M+ +G+ PN +TY+
Sbjct: 286 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GFC G+ A++ + M + G P+ Y ++ CK E A+ + G
Sbjct: 346 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 405
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
P+ T +L+TGL KV +AK+L G++K
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 436
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
+N+L+ + D + +F+ P + G +PD+ Y +I +C++S A +
Sbjct: 341 TYNSLIEGFCLVGDLNSARELFVSMP-SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 399
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + +P+ ++GAL+ G ++ K D K+ +M+ YG+ + +Y + ++ LCK
Sbjct: 400 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 459
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA L +++ S +K + ++ I G CK G E A + + + L P+ Y
Sbjct: 460 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 519
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
M++ C+GG A ++ G P+ T +L+ G + K+ + EL+ ++ ++
Sbjct: 520 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD---------------------- 182
+ +F LL L K Y +V ++ + + GI PD
Sbjct: 96 LSSFTHLLSGLAKIKHYSQVFYLYNQM-RLSGISPDCCTLNILLNCLCNVNRVGEGLAVM 154
Query: 183 -------------TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
TY +IK C S A + M + PNA ++G L+ G +
Sbjct: 155 AGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRT 214
Query: 230 EKYEDVNKVLQMM----ERYGM--KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
K+ Q M YG+ K V Y++ I +LCK R+ EA+ L +EM +GM
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P ++Y+ ++ EEAK+ + M N G+ PN + ++ +CK G A
Sbjct: 275 PTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 326
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ I +G VPN T SL+ G ++ A+EL
Sbjct: 327 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + + E A++ + M + R V + ALL L + K++F K YGI
Sbjct: 384 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF-GVMKVYGIPG 442
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL Y + C++ A + ++ +IK + F L+ G K K E ++
Sbjct: 443 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 502
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ + + ++ V YN+ IH C+ + +A L +M G P+ +TY+ I GF +
Sbjct: 503 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 562
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSV 323
E+ + +M +S + ++
Sbjct: 563 KKLEKVVELLHMMVQRDVSLDVNI 586
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 192 CESSDSSS--AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
C++ + ++ A+ M + P SSF L++G K + Y V + M G+
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
N+ ++ LC + + E A++ +L +G P+ VTY+ I G C + +A +
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI------AKGWVPNFTTMKSLV 363
M G +PN+ Y T++ +C+ G+ AL +E + + P + ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249
Query: 364 TGLAGASKVSEAKEL 378
L + EA++L
Sbjct: 250 DALCKDRREDEARDL 264
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 93/255 (36%), Gaps = 34/255 (13%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P L ++ ++ + S + + +M I P+ + L+ + + V
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + R G + Y I LC + ++A L M G PN++TY + G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 299 DGNFEEAKKFYRIMSNS------GLSPNSSVYFTMVYFMCKGGD---------------- 336
GN A K ++ M N P Y ++ +CK
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273
Query: 337 -----------YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
+E A E + +G PN T L+ L KV EAK+L+ +++
Sbjct: 274 TPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 333
Query: 385 KFTKNVDTWNEIEAG 399
N+ T+N + G
Sbjct: 334 GIVPNLLTYNSLIEG 348
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ P +++H + G K ++ + Y M SG+SP+ ++ +C
Sbjct: 87 MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNE 395
L + +G++P+ T +L+ GL ++S+A L + K T N T+
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206
Query: 396 IEAGL 400
+ GL
Sbjct: 207 LMKGL 211
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 8/279 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + F M + L+ + + LL E+ + ++ GI PD ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL-LDLMVRNGIHPDHYVFSIL 377
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A+ A + ++M ++ + PNA ++GA++ K + ED + M G+
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
G +YN IH LC K A+ L+ EML +G+ N++ ++ I CK+G E++K
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +M G+ PN Y T++ C G + A+ ++ G PN T +L+ G
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 368 GASKVSEAKELIGLVKE----KFTKNVDTWNEIEAGLPQ 402
K+S ++ + L KE + ++ T+N I GL Q
Sbjct: 558 ---KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
++ A T+ EM + + V +N+++ AL A+ + V K G+ PD TYN
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYN 270
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C S A L +M ++P+ ++ L+ K + + K+ M +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K ++ Y + E LLD M+ G+ P+ +S I + G ++A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M GL+PN+ Y ++ +CK G E A+ + ++ I +G P SL+ G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 366 LAGASKVSEAKELI 379
L +K A+ELI
Sbjct: 451 LCTCNKWERAEELI 464
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 168/366 (45%), Gaps = 15/366 (4%)
Query: 36 LTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKL-SEANYFNGI 94
L +++++ AL LL ++ R P D ++++ IN E +
Sbjct: 168 LCDENRSQEALELLHMMADD-------RGGGSPP----DVVSYTTVINGFFKEGDSDKAY 216
Query: 95 SQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
S Y E+ R L + + I +A + A+ M ++ + +N++L
Sbjct: 217 STY-HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
+ KE F++ ++ G++PD+ TY+ ++ C++ A I M ++ +KP
Sbjct: 276 YCSSGQPKEAIG-FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
+++G L+ G+ + +++ +L +M R G+ ++++ I + K +A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
+M +G+ PN+VTY I CK G E+A ++ M + GLSP + VY ++++ +C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTW 393
+E A E + +G N S++ +V E+++L L V+ NV T+
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 394 NEIEAG 399
N + G
Sbjct: 515 NTLING 520
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
AF LL L K + + + G P++ +YN ++K C+ + S A +L
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 207 M--DR-KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M DR P+ S+ ++ GF+KE + M G+ V YN I +LCK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
+ +A +L+ M+ G+ P+ +TY+ ++G+C G +EA F + M + G+ P+
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
Y ++ ++CK G A +G P TT +L+ G A + E L+ L+
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 7/219 (3%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-V 235
+ PDL TY +I C + ++ L + +K + +A +F L+ G +++ D +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK---GMKPNSVTYSHF 292
+ VL+ M G V YN+ + LC + EA LL M G P+ V+Y+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I GF K+G+ ++A Y M + G+ P+ Y +++ +CK + A+ + G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
+P+ T S++ G + + KE IG +K+ + V+
Sbjct: 263 MPDCMTYNSILHGYCSS---GQPKEAIGFLKKMRSDGVE 298
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N E A EM + + + FN+++ + E +++F E G+KP++
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVI 512
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN +I +C + A +L+ M +KPN ++ L+ G+ K + ED + + M
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNF 302
E G+ + YN+ + L + R+ A AK L + G + TY+ ++G CK+
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 303 EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSL 362
++A + ++ + L + + M+ + K G + A + G VPN+ T + +
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 363 VTGLAGASKVSEAKEL 378
+ G + E +L
Sbjct: 693 AENIIGQGLLEELDQL 708
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 156 TIAKDYKEVKR-----VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
T+ Y ++ R V + ++ G+ PD+ TYN +++ ++ +++A + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ S++ ++ G K + +D ++ Q + +K +N+ I +L K+ + EA
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
K L S G+ PN TY G EE + + M ++G + +S + +V
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 730
Query: 331 MCKGGDYETA 340
+ + G+ A
Sbjct: 731 LLQRGEITRA 740
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 110/207 (53%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PD+ TYN ++ C++ + A I M ++ +KP+ +++G L+ G+ + ++
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ +L +M + GM+ ++N+ I + K K E + +M +G+ PN+V Y I G
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G ++A + M + GL+PN VY ++++ +C +E A E + +G PN
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLV 382
+++ L +V E+K+L L+
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLL 313
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 104 RPDLQNERFHAHSIILYGQAN----MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
+PD+ + +L+G A+ + H + + +L H V FN L+ A T +
Sbjct: 144 KPDIT-----TYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV--FNILICAYTKQE 196
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSF 219
EV VF + + G+ P+ Y VI C+ A +M K + PN +
Sbjct: 197 KVDEVVLVFSKM-RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVY 255
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
+L+ +K+E +++ + G+ + +N + SLCK + E+K L D +
Sbjct: 256 TSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH 315
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+ P+ +TYS I G+C G + A K M + GL P+S Y T++ CK E
Sbjct: 316 IGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMED 375
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
AL KE + G P+ T ++ GL + + AKEL + E T+ + T+N I
Sbjct: 376 ALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 43/320 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + +E A+ F++M + V +N+L+ L E +++F K G+KP
Sbjct: 87 YCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKR-GLKP 145
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY ++ + + +LA M + ++ + F L+ + K+EK ++V V
Sbjct: 146 DITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVF 205
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG---- 295
M + G+ Y I LCKL + +A ++M+ KG+ PN V Y+ I+
Sbjct: 206 SKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTY 265
Query: 296 -------------------------------FCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
CK+G E+KK + ++ + G++P+ Y
Sbjct: 266 DKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITY 325
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
T++ C G + A+ ++ G P+ T +L+ G K++ ++ + L KE
Sbjct: 326 STLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC---KINRMEDALALFKE 382
Query: 385 KFTKNVD----TWNEIEAGL 400
+ V+ T+N I GL
Sbjct: 383 MESNGVNPDIITYNIILHGL 402
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 6/272 (2%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ A T+ EM + ++ +N+++ AL+ A+ V T + P+ TYN
Sbjct: 27 VDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL-----TVMVMPNCFTYN 81
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
++ +C S S A I +M I+P+ ++ +L+ K K + K+ M +
Sbjct: 82 SIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKR 141
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K ++ Y +H E LL M+ GM+ + ++ I + K +E
Sbjct: 142 GLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEV 201
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M GL+PN+ Y T++ +CK G + A+ ++ I KG PN SL+
Sbjct: 202 VLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHA 261
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
L K +A+ELI ++ + N+ +N I
Sbjct: 262 LCTYDKWEKAEELIFEILDQGINPNIVFFNTI 293
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A E+ + + ++ FN +L +L E K++F + G+ PD+ TY+
Sbjct: 269 EKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLF-DLLGHIGVNPDVITYST 327
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I +C + A +L M +KP++ ++ L+ G+ K + ED + + ME G
Sbjct: 328 LIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
+ + YN+ +H L + R+ A AK L + G + TY+ + F K
Sbjct: 388 VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439
>gi|297610680|ref|NP_001064892.2| Os10g0484900 [Oryza sativa Japonica Group]
gi|255679504|dbj|BAF26806.2| Os10g0484900 [Oryza sativa Japonica Group]
Length = 434
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 32/353 (9%)
Query: 49 LKSESNPEKILEICRAAALT-----PESHLDRLAFSIAINKLSEANYFNGISQYL----E 99
++ E++P +I + A AL+ P H R FS+A ++L+ + + L +
Sbjct: 56 VRGEADPARIHSLV-ATALSRPDDYPRLHGSRPLFSLAASRLARLRRPDLAASLLRALLD 114
Query: 100 ELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK 159
P L A +I L+ + A+R F D S + +ALL AL A
Sbjct: 115 SAPASPGLL-----ARAISLFPG---PDDALRAFS--DSAPAARSDVSLSALLSALFRAG 164
Query: 160 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK---SIKPNA 216
+VK ++G+ P ++N ++ A ++S+ ++A +L EM +K P+
Sbjct: 165 RVDDVKSTLASAETSFGVAPGRASHNVLLHALVKNSELAAARKLLGEMAKKLKHRPAPDI 224
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
S+ ++AG+ + E K+L+ + ++ V YN RI K + + + LLD
Sbjct: 225 VSYNTVLAGYSAQGDEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDA 284
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM---------SNSGLSPNSSVYFTM 327
M SK + PN +TY+ + G+CK+GN A + ++ M S+ G+S +S Y +
Sbjct: 285 MESKDVAPNYLTYNALVQGYCKEGNVGSAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVL 344
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ + + AL CK A P F +K LV GL K +EAK+++
Sbjct: 345 FRSLVEKERLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKGGKSAEAKDVVA 397
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 11/308 (3%)
Query: 76 LAFSIAINKLSEANYFNG---ISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAV 130
++F+ I+ + A +G + + + E PD+ + + ++ G + E A
Sbjct: 276 VSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV-----YTYGALIQGLCRVGRIEDAR 330
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
F++M ++ + F L+ A D + + + E + G++PD TYN ++
Sbjct: 331 GVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDAVTYNAIVNG 389
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + D SA I+ EM ++P+ ++ L+ G+ KEE+ + ++ Q M G+
Sbjct: 390 LCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLD 449
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L K + A+A+ +L EM+ G++P++ TY+ I FC+ G+ + + +
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N G P Y ++ CK G + A I G P+ T L+ G
Sbjct: 510 EMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 569
Query: 371 KVSEAKEL 378
KV++ +EL
Sbjct: 570 KVTDIEEL 577
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F EM +R +V +FN ++ + A D + + + G+ PD+ TY +I
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA-GVTPDVYTYGALI 317
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C A + +M + +KPNA F L+ K+ E + ++ + M G++
Sbjct: 318 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 377
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD--------- 299
YN ++ LC+ R A ++ EM S G++P++VTY+ I G+CK+
Sbjct: 378 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 437
Query: 300 --------------------------GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
G +A++ M +GL P+++ Y ++ C+
Sbjct: 438 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 497
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
GD +T L KE KG P T ++ G ++ A L IG+ + T
Sbjct: 498 KGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDIT 557
Query: 388 KNV 390
N+
Sbjct: 558 YNI 560
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
FN L+ L + + VF E ++ G++ + ++N +I C + D A ++ M
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEM-QSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 301
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ P+ ++GAL+ G + + ED V + M GMK ++ + I + CK
Sbjct: 302 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 361
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
L EM +G++P++VTY+ + G C+ + + A M ++GL P++ Y T+
Sbjct: 362 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 421
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
+ CK + + A+ + +A+G + T +L++GL+ A + ++A+ ++G + E
Sbjct: 422 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 478
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+ +N +++ + +SA ++ EM + ++ SF +++G + +
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ + M G+ V Y I LC++ + +A+ + ++M +GMKPN+V ++ I
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G+ E + +R M G+ P++ Y +V +C+ D ++A G E + G P+
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAGL 400
T +L+ G ++ A E+ +V E + T+ + +GL
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA A ++L G+ P + ++ + + G A+ + M + G+ + TM+
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
MC+ GD + A + G P+ T +L+ GL ++ +A+
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDAR 330
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L + +K V + E + G
Sbjct: 68 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILEC-G 126
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A + + + ++P+ S+ L+ G+ + ++
Sbjct: 127 YPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 186
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK +A L DEML KG+ PN VT++ I G
Sbjct: 187 RLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGH 246
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T+VY +CK GD A G E KG P+
Sbjct: 247 CKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDK 306
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 307 FTYTTLIDGCCKEGDLDAAFE 327
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 153 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-RASGVQPDVYTYSVLINGL 211
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ S A + EM K + PN +F L+ G K + + ++ + M + +
Sbjct: 212 CKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJ 271
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE-------- 303
YN ++ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ +
Sbjct: 272 ITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKR 331
Query: 304 ---------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
+A+K R M + GL P++ Y ++ CK GD
Sbjct: 332 MIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGD 391
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTG 365
KE G VP T L+ G
Sbjct: 392 VWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 16/276 (5%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++E+ E S+ FN L+ D + VF K +G++P + +YN ++ +
Sbjct: 119 YEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITK-WGLRPSVVSYNTLMNGYI 177
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
D + + + M ++P+ ++ L+ G KE +D N++ M G+
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
+ I CK + A + +MLS+ + P+ +TY+ +YG CK G+ +A M
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
GL P+ Y T++ CK GD + A K I + + +L++GL +
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 357
Query: 373 SEAKEL------IGL---------VKEKFTKNVDTW 393
+A+++ +GL + +F K D W
Sbjct: 358 XDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 393
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
RA+ + P+ + +S+ IN L + + + ++ +E+ + + N I + +
Sbjct: 193 RASGVQPDVY----TYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCK 248
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ A+ +K+M L + +N L+ L D + + E G+KPD
Sbjct: 249 NGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXK-GLKPDKF 307
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TY +I C+ D +A+ M +++I+ + ++ AL++G +E + D K+L+ M
Sbjct: 308 TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREM 367
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
G+K Y + I+ CK + LL EM G P VTY+ + G
Sbjct: 368 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L KLR +E+L G + ++ ++ FCKDG+ A + ++ GL
Sbjct: 103 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGL 162
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y T++ + GD + A G P+ T L+ GL S + +A E
Sbjct: 163 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANE 222
Query: 378 L 378
L
Sbjct: 223 L 223
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 35/376 (9%)
Query: 60 EICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIIL 119
E+ R A + + L+ S+ ++ +A + + L+E+ N + +
Sbjct: 118 ELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDT 177
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---- 175
Y + KEM+ + +VG + L+ L+ A D +V+ VF E +
Sbjct: 178 YTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGD 237
Query: 176 ------------------------------GIKPDLDTYNRVIKAFCESSDSSSAYSILA 205
GI+P+ TY +I FC+ +A +L
Sbjct: 238 VYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLT 297
Query: 206 EMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
+M + + N F ++ G+ + + ++ +MER G++ V YN LC++
Sbjct: 298 DMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVN 357
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ +AK LL M G++ N V+Y+ I K+G+ EA++ +R M G P+ Y
Sbjct: 358 RMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYN 417
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
M+ K G A F KE KG VP+ T +LV G KV A L +K++
Sbjct: 418 VMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQR 477
Query: 386 FTK-NVDTWNEIEAGL 400
K NV + + +GL
Sbjct: 478 GAKPNVVAYTALISGL 493
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 1/298 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
++I ++ LS A + + +E+K + + F++ I Y +A A F E
Sbjct: 206 YTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECV 265
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ + + + AL+ + + + + + G+ + +N +I +C
Sbjct: 266 GNGIEPNERTYGALINGFCKIGQIEAAEMLLTDM-QLRGVGHNQIIFNTMIDGYCRHGMV 324
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
A I A M+R I+ + ++ L G + + ED K+L +M G++S Y
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I K EA+ L +M KG +P+ VTY+ I G+ K G+ EA++F + M GL
Sbjct: 385 ISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGL 444
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
P+ Y +V+ C G + AL +E +G PN +L++GLA + EA
Sbjct: 445 VPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 7/292 (2%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S IN A S+ +E NER + I + + E A +M
Sbjct: 241 YSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQ 300
Query: 138 EHKLRHSVGAFNALLLALT---IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCES 194
+ H+ FN ++ + E+K V + GI+ D+ TYN + C
Sbjct: 301 LRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVM----ERMGIQLDVYTYNTLACGLCRV 356
Query: 195 SDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
+ A +L M ++ N S+ L++ KE + ++ + ME G + V Y
Sbjct: 357 NRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTY 416
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
NV I K EA+ EM KG+ P+ TY+ ++G C +G + A + + M
Sbjct: 417 NVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQ 476
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G PN Y ++ + K G E A F +A G P+ T LV L
Sbjct: 477 RGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%), Gaps = 17/330 (5%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHA-VRTFKEM 136
+++ + L + N +G + L E+ + + + I ++M E V+ +E+
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI-----SSMCEVGLVKEGREL 238
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYK---EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E + V +NAL+ L DYK E+ R +E GI P++ +Y+ +I C
Sbjct: 239 AE-RFEPVVSVYNALINGLCKEHDYKGAFELMREMVE----KGISPNVISYSTLINVLCN 293
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAG-FYKEEKYEDVNKVLQMMERYGMKSGVS 252
S A+S L +M ++ PN + +LV G F + ++ ++ QM+ +G++ V
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN + C +A ++ M G PN TY I GF K G+ + A + M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
SG PN VY MV +C+ ++ A + + P+ T + + GL A ++
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 373 SEAKELIGLVKE--KFTKNVDTWNEIEAGL 400
A+++ +++ + N+ T+NE+ GL
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 135/305 (44%), Gaps = 1/305 (0%)
Query: 77 AFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEM 136
++ IN L + + + G + + E+ + N ++ I + + E A +M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 137 DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSD 196
+ ++ ++L+ + + ++ + + +G++P++ YN +++ FC +
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
A S+ + M+ PN ++G+L+ GF K + + M G V +Y
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+ +LC+ K EA++L++ M + P+ T++ FI G C G + A+K +R M
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 317 -LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
PN Y ++ + K E A G +E +G + +T +L+ G A A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 376 KELIG 380
+L+G
Sbjct: 548 LQLVG 552
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 125/311 (40%), Gaps = 34/311 (10%)
Query: 122 QANMTEHAVRTFKEMDEHKL-RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPD 180
Q + A+ FK + L +H+ F ++ L + V+ + + K G
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCS 110
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
D + VI + + + A + + P+ + ++ E + + + V +
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS---------- 290
M+R G + V YNV + +LCK K AK LL EM +KG P++V+Y+
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 291 --------------------HFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
I G CK+ +++ A + R M G+SPN Y T++
Sbjct: 231 LVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF--TK 388
+C G E A F + + +G PN T+ SLV G +A +L + F
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 389 NVDTWNEIEAG 399
NV +N + G
Sbjct: 351 NVVAYNTLVQG 361
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 9/283 (3%)
Query: 86 SEANYFNGISQY--LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
S N +S + +EE+ P++ R + I + + + AV + +M
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNI---RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+V + ++ AL +KE + + IE P + T+N IK C++ A +
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESL-IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 204 LAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+M+++ PN ++ L+ G K + E+ + + + G++ S YN +H C
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS--NSGLSPN 320
A L+ +M+ G P+ +T + I +CK G E A + ++S P+
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
Y +++ +C+ E + + I+ G VP+ T L+
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 123 ANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGI 177
A + A + F++M++ H+ ++ +N LL L I + Y + +F+ G+
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-----GV 524
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
+ TYN ++ C + A ++ +M P+ + ++ + K+ K E +
Sbjct: 525 EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Query: 238 VLQMME--RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ++ R + V Y I LC+ + LL+ M+S G+ P+ T+S I
Sbjct: 585 MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINC 644
Query: 296 FCKD 299
F D
Sbjct: 645 FILD 648
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 4/183 (2%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
+F ++ + + + V +LQ M+ G ++ I ++ A + +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
G P+ Y+H + + + YR M G PN Y ++ +CK
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIE 397
+ A E KG P+ + ++++ + V E +EL E+F V +N +
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL----AERFEPVVSVYNALI 253
Query: 398 AGL 400
GL
Sbjct: 254 NGL 256
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 1/272 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I LY + A+ + M E ++H++ ++ ++ KD+ VF + K G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE-G 549
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KPD+ YN +I AFC + A + EM + +P +F ++ G+ K
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+V MM R G V +N I+ L + R+ +A +LDEM G+ N TY+ + G+
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
G+ +A +++ + N GL + Y ++ CK G ++AL KE A+ N
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK 388
L+ G A V EA +LI +K++ K
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 1/302 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ +S+ + S+A + + +E K N + I + Q E A +E
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M+E + + ++ ++ T+ D K+ VF K G P + TY +I + +
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL-KECGFTPTVVTYGCLINLYTKVG 498
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
S A + M + +K N ++ ++ GF K + + + V + M + GMK V +YN
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
I + C + A + EM +P + T+ I+G+ K G+ + + + +M
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G P + ++ + + E A+ E G N T ++ G A +A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 376 KE 377
E
Sbjct: 679 FE 680
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI + Y+ ++ + +D + + P ++G L+ + K K
Sbjct: 444 GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKA 503
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+V ++M+ G+K + Y++ I+ KL+ A A A+ ++M+ +GMKP+ + Y++ I
Sbjct: 504 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISA 563
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC GN + A + + M P + + +++ K GD +L G VP
Sbjct: 564 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 356 FTTMKSLVTGLAGASKVSEAKELI 379
T L+ GL ++ +A E++
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEIL 647
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D+ TY ++KA C+S SA ++ EM ++I N+ + L+ G+ + +
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++Q M++ G+K + Y I + K A ++EM + G+KPN TY+ I G
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD------YETALGFCKESIA 349
+ + E+A Y M G+ P+ +VY ++ + Y + CKE +
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVE 868
Query: 350 KGWVPNFTT 358
G + + T
Sbjct: 869 AGLIVDMGT 877
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 4/278 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+++L+ RP + H Y ++ ++ F M +V FN L+ L
Sbjct: 580 MQKLRHRPTTRTFMPIIHG---YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ ++ + E G+ + TY ++++ + D+ A+ + + + +
Sbjct: 637 KRQMEKAVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ AL+ K + + V + M + +YN+ I + EA L+ +M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+G+KP+ TY+ FI K G+ A + M G+ PN Y T++ +
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
E AL +E A G P+ L+T L + ++EA
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 109/268 (40%), Gaps = 4/268 (1%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
+ YG+ A TF+ M + + + +L+ A + +D E + K G
Sbjct: 316 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM-KEEG 374
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I+ L TY+ ++ F ++ + +A E R NAS +G ++ + E
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+++ ME G+ + +++Y+ + + + + + G P VTY I +
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K G +A + R+M G+ N Y M+ K D+ A ++ + +G P+
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKE 384
++++ G + A I VKE
Sbjct: 555 ILYNNIISAFCGMGNMDRA---IQTVKE 579
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 1/218 (0%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP + ++K + D A M + I P + + +L+ + ++
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
++ M+ G++ + Y+V + K A DE N+ Y IY C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
+ N E A+ R M G+ ++Y TM+ D + L K G+ P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWN 394
T L+ K+S+A E+ ++KE+ K N+ T++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 10/316 (3%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFN---GISQYLEELKTRPDLQNERFHAHSIIL 119
R A+ P + FSI IN L + + G+ + + + +PDL + + I
Sbjct: 315 RGKAMVPP---NSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDL---LLYNNLIDG 368
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+N + + +EM+E + + N + L D + + + +G P
Sbjct: 369 LCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKM-RIHGHVP 427
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ ++K C+ A L +M + +P+ ++ A + G K ++ + K+
Sbjct: 428 WIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLF 487
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q + G V YN+ I LCK ++ AEA+ LL EM KG+ P++VTY+ I G CK
Sbjct: 488 QDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKT 547
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ EEA F +M PN Y T++ +C G + AL E KG P+
Sbjct: 548 DHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAY 607
Query: 360 KSLVTGLAGASKVSEA 375
+ + GL+ + +EA
Sbjct: 608 MAFIHGLSNCGRPNEA 623
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + +M E + + A++A L L ++ + ++F + G PD+ YN +I
Sbjct: 448 ACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDIC-AQGYCPDVIAYNILI 506
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K C++ + A ++L EM+ K + P+A ++ L+ G K + E+ L MM +
Sbjct: 507 KGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKERE 566
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V Y+ I+ LC + +A L +EM KG P+S+ Y FI+G G EA +
Sbjct: 567 PNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVY 626
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
R M + P++ VY ++ + A +E + KG P+
Sbjct: 627 LREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDL 674
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 105/262 (40%), Gaps = 55/262 (20%)
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
++ ++ AF + A ++ M+ K+++ N +F +L+ GF KE + + + M
Sbjct: 137 VFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKM 196
Query: 243 ERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN- 301
++ G +S+Y+V I LC + +A L EM ++P+ + I F K+
Sbjct: 197 KKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEEL 256
Query: 302 ---FEEA-----KKFYRIMSNSGLS----------------------------------- 318
FEE K ++ NS L+
Sbjct: 257 TCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRG 316
Query: 319 -----PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
PNS+ + ++ + K GD + A+G ++ G P+ +L+ GL ++++
Sbjct: 317 KAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQ 376
Query: 374 EAKELI------GLVKEKFTKN 389
E+ L+ G+ FT N
Sbjct: 377 ESCGLLQEMEESGIEPTSFTNN 398
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I Y ++ A+ ++ EHKL +L L K +K V + E + G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC-G 137
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
L +N ++ FC+ D A S+ + + ++P+ S+ L+ G+ + ++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
++ M G++ V Y+V I+ LCK K A L DEML KG+ PN VT++ I G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK+G + A + Y+ M + L P+ Y T++Y +CK GD + A E KG P+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 317
Query: 357 TTMKSLVTGLAGASKVSEAKE 377
T +L+ G + A E
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFE 338
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 29/339 (8%)
Query: 83 NKLSEANYFNG-ISQYLEELKTRPDLQNERF---HAHSIILYGQANMTEHAVRT------ 132
N+ S+ F+G I+ YLE R ++ R H + + EH ++
Sbjct: 67 NQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLV 126
Query: 133 ---FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
++E+ E S+ FN L+ D + + VF K +G++P + +YN ++
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK-WGLRPSVVSYNTLMN 185
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKS 249
+ D + + + M ++P+ ++ L+ G KE K + N++ M G+
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVP 245
Query: 250 GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+ I CK + A + +MLS+ + P+ +TY+ IYG CK G+ ++A
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
MS GL P+ Y T++ CK GD +TA K I + + +L++GL
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365
Query: 370 SKVSEAKEL------IGL---------VKEKFTKNVDTW 393
+ +A+++ +GL + +F K D W
Sbjct: 366 GRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 404
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A F + + LR SV ++N L+ D E R+ + G++PD+ TY+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS-GVQPDVYTYSVLI 219
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ S A + EM K + PN +F L+ G K + + ++ + M +
Sbjct: 220 NGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE----- 303
+ YN I+ LCK +A L+DEM KG+KP+ TY+ I G CK+G+ +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEH 339
Query: 304 ------------------------------EAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
+A+K R M + GL P++ Y ++ CK
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 399
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
GD KE G P+ T L+ G
Sbjct: 400 KGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 11/257 (4%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
F LL +L K + + G P + +YN ++K C S S A +L M
Sbjct: 136 FTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMM 195
Query: 208 --DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 265
D P+ S+ ++ G +KE + M G+ V YN + +LCK +
Sbjct: 196 ADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQ 255
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+A +L+ M+ G+ P+ +TY+ ++G+C G +EA M + G+ P++ Y
Sbjct: 256 AMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYT 315
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+++ ++CK G A I +G PN T +L+ G A + E ++L+ L++ +
Sbjct: 316 SLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMQNE 375
Query: 386 FTK---------NVDTW 393
K N+D W
Sbjct: 376 AAKINSGCSDLRNIDRW 392
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 8/233 (3%)
Query: 115 HSIILYGQ--ANMTEH-----AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
H+++ Y A + H AV+ F+ M +R S+ FN L+ A
Sbjct: 141 HNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHF 200
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F + K G+ P + TYN +I FC D + A +M + + P ++ L+A F
Sbjct: 201 FNQM-KAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFA 259
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
KE + + +L ME+ G++ V Y V +H+LC K A+ L M KG+KPNSV
Sbjct: 260 KENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSV 319
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
Y IYG+ ++G+ +A + M +GL PN + Y + +C G + A
Sbjct: 320 LYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEA 372
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 1/231 (0%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSIL 204
V A AL+ + D E +RVF P+ G+ P+ TY +I + +++
Sbjct: 38 VAACTALVHVCCQSGDVAEARRVFDVMPR-LGVAPNEVTYTALINGYFVRGHREMGFALF 96
Query: 205 AEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKL 264
AEM R ++PN ++ L+ + + +++ + M G+ V YN+ I LC+
Sbjct: 97 AEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRH 156
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K +A L + M +G++P+ VT++ I G+ K G A F+ M +GL P+ Y
Sbjct: 157 SKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTY 216
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
++ C+ D A+ + +G P T L+ A +++ A
Sbjct: 217 NELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRA 267
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
F EM + ++ +N L+ ++K + +F E P G+ ++ +YN +I C
Sbjct: 96 FAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMP-VKGVVHNVVSYNILIAGLC 154
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S A + M R+ I+P+ +F L+ G+ K K + M+ G+ V
Sbjct: 155 RHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVV 214
Query: 253 MYNVRIHSLCKLRKCAEA-KALLDEMLSKGMKPNSVTYSHFIYGF--------------- 296
YN I C++R A A +A LD M +G+ P VTY+ I F
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLD-MKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSE 273
Query: 297 --------------------CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
C +G A+K ++ M G+ PNS +Y M+Y + G
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGS 333
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
AL E G +PN + + L K EA+ LI
Sbjct: 334 SYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALI 376
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%)
Query: 150 ALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
A++ L +A + + V K+ D+ ++ C+S D + A + M R
Sbjct: 7 AVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPR 66
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
+ PN ++ AL+ G++ E + M R G++ + YN I C+ +
Sbjct: 67 LGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKS 126
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
A+ L DEM KG+ N V+Y+ I G C+ ++A + + M G+ P+ + ++
Sbjct: 127 ARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLID 186
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K G AL F + A G P+ T L+ G ++ A +KE+
Sbjct: 187 GYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKER 242
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + + N + A EM++ L V ++ LL AL + +++F + G
Sbjct: 255 IAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLF-QSMDLKG 313
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+KP+ Y+ +I + S A ++ EM + + PN +S+ + E K ++
Sbjct: 314 VKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAE 373
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKL 264
++ ME G+++ ++ + + + +L
Sbjct: 374 ALIDDMEHAGLQTSETICRILLDAKARL 401
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 133 FKEMD-----EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
FKE D + ++ +V +N+++ AL A+ + V K+ G+ PD TYN +
Sbjct: 99 FKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSI 157
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ FC S A L +M ++P+ ++ +L+ K + + K+ M + G+
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
K ++ Y + E LLD M+ G+ PN +S + + K EEA
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M GL+PN+ Y T++ +CK G E A+ + ++ I +G P+ SL+ L
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337
Query: 368 GASKVSEAKEL 378
K +A+EL
Sbjct: 338 IFDKWEKAEEL 348
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 130/261 (49%), Gaps = 1/261 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A+ M + + +N+++ + KE VF++ ++ G++PD+
Sbjct: 128 KAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI-VFLKKMRSDGVEPDV 186
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C++ + A I M ++ +KP+ +++G L+ G+ + +++ +L +
Sbjct: 187 VTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDL 246
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G+ ++++ + + K K EA + +M +G+ PN+VTY I CK G
Sbjct: 247 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGR 306
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E+A ++ M + GL P+S VY ++++ +C +E A E + +G + S
Sbjct: 307 VEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNS 366
Query: 362 LVTGLAGASKVSEAKELIGLV 382
++ +V E+ +L L+
Sbjct: 367 IIDSHCKEGRVIESGKLFDLM 387
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 11/223 (4%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM--DRKSIKPNASSF 219
++ + VF E + GI PD+ +YN ++ C+ + S A +L M D P+ S+
Sbjct: 34 EDARHVFDELLRR-GI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY 91
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
++ GF+KE D++K+L +R + V YN I +LCK + +A +L M+
Sbjct: 92 STVINGFFKE---GDLDKMLD--QR--ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+ P+ +TY+ ++GFC G +EA F + M + G+ P+ Y +++ ++CK G
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
A +G P+ TT +L+ G A + E L+ L+
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 247
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ +Y+ VI F + D L +M + I PN ++ +++A K + + +V
Sbjct: 86 PDVVSYSTVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M + G+ YN +H C + EA L +M S G++P+ VTY+ + CK
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G EA+K + M+ GL P+ + Y T++ G G + G PN
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 359 MKSLVTGLAGASKVSEA 375
LV A KV EA
Sbjct: 259 FSILVCAYAKQEKVEEA 275
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 123/309 (39%), Gaps = 49/309 (15%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD H GQ + A+ K+M + V +N+L+ L E
Sbjct: 149 PDCMTYNSIVHGFCSSGQP---KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+++F K G+KPD+ TY +++ + + +L M R I PN F LV
Sbjct: 206 RKIFDSMTKR-GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264
Query: 225 GFYKEEKYEDVNKVLQMMERYGM---------------KSGVS----------------- 252
+ K+EK E+ V M + G+ KSG
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324
Query: 253 ---MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+YN IHSLC K +A+ L EML +G+ +++ ++ I CK+G E+ K +
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+M G+ P+ + G + E F S + G VPN+ T + + + G
Sbjct: 385 DLMVRIGVKPD---------IITLGRNDEAKDLFVAFS-SNGLVPNYWTYRLMAENIIGQ 434
Query: 370 SKVSEAKEL 378
+ E +L
Sbjct: 435 GLLEELDQL 443
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 11/221 (4%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + E A+ F +M + L + + ++ L + ++ F + G++P
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE-GLRP 324
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D YN +I + C A + EM + I + F +++ KE + + K+
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+M R G+K + L + EAK L S G+ PN TY
Sbjct: 385 DLMVRIGVKPDI----------ITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 434
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G EE + + M ++G + +S + +V + + G+ A
Sbjct: 435 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 475
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 37/315 (11%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
Q+ A+R F M ++ A +ALL AL ++ ++VF + + G+ +
Sbjct: 214 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRA-GVAMNT 272
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
YN ++ ++ D++ A S++ MD + + SF ++A + ++ + V +
Sbjct: 273 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 332
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME G+K+ V +N IH LCK R+ EA LL EM G+ P+ VTY+ + G+C+ G+
Sbjct: 333 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 392
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYF-----------------------------------T 326
EEA K M G+ P + Y T
Sbjct: 393 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 452
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE-LIGLVKEK 385
++ CK GD +AL + + G + T K+LV G A ++ EAKE L ++
Sbjct: 453 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 512
Query: 386 FTKNVDTWNEIEAGL 400
F+ N + I GL
Sbjct: 513 FSPNYSVLSWIVDGL 527
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 93 GISQYLEELKTRPDLQN---ERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAF 148
G + E L TR D +RF +++I LY + M A+ + M+ ++ V +
Sbjct: 286 GDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTW 345
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
N+L+ L + KE ++ E G+ PD TY ++ +C + D A + EM+
Sbjct: 346 NSLIHGLCKERRVKEASQLLREMAMA-GVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEME 404
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ P +++ A++ ++ K ++VN +L M+ +++ N I++ CK
Sbjct: 405 AMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMT 464
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
A + M+ G++ + TY ++GFCK +EAK+ M +G SPN SV +V
Sbjct: 465 SALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 524
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+C + L E + +G+ P+ +SL+ L
Sbjct: 525 DGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRL 562
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 1/273 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ L + SQ L E+ + + + Y +A E AV+
Sbjct: 341 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLR 400
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM+ + V +NA+L L KEV + E + ++ D T N +I A+C+
Sbjct: 401 GEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDER-KVQADHVTCNTLINAYCK 459
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D +SA + M ++ + ++ ALV GF K ++ ++ + L M G S+
Sbjct: 460 RGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSV 519
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+ + LC A+ DE++ +G P+ Y I CK G + A + M
Sbjct: 520 LSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQ 579
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
GL + VY T+ G AL E
Sbjct: 580 GKGLEADCLVYATLACAYLTAGKPVAALDILNE 612
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVK-RVFIEFPKTY---GIKPD 180
M AV+TF M L SV N +L +L KE K +F F K GI PD
Sbjct: 120 MVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLV-----KEQKVDMFWSFFKGMLAKGICPD 174
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ T+N ++ A CE +A +L +M+ + P A ++ L+ + K+ +Y+ ++++
Sbjct: 175 VATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLID 234
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M G+ V YNV I +LC+ + A+ LL M + PN +TY+ I GF ++G
Sbjct: 235 CMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREG 294
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
E A K + MS L PNS Y T++ C G+ AL ++ G PN T
Sbjct: 295 KIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYG 354
Query: 361 SLVTGL 366
+L+ GL
Sbjct: 355 ALLNGL 360
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 7/273 (2%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M+E + + +N LL YK ++ I+ + GI D+ TYN I C
Sbjct: 198 LRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQL-IDCMASKGIGVDVCTYNVFIDNLC 256
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S S+ Y +L M R + PN ++ L++GF +E K E KV M + +
Sbjct: 257 RDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSI 316
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I C EA L+D M+S G++PN VTY + G K+ F M
Sbjct: 317 TYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERM 376
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ + Y M+ +CK G E A+ + + P+ T L+ G K+
Sbjct: 377 RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKI 436
Query: 373 SEAKELI------GLVKEKFTKNVDTWNEIEAG 399
+ AKE++ GLV + +N + G
Sbjct: 437 NNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMG 469
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N L+ + +VF E + + P+ TYN +I C + + A ++ M
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEM-SLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
++PN ++GAL+ G YK ++ V+ +L+ M G++ Y I LCK
Sbjct: 342 VSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGML 401
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA LLD+ML + P+ VT+S I GF + G AK+ M +GL PN +Y T+
Sbjct: 402 EEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTL 461
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
+Y CK G + AL G V + T LV K+ EA+
Sbjct: 462 IYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+R M H LR + + ALL L ++ V + +E + G++ +Y +I
Sbjct: 334 ALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSI-LERMRMGGVRVSHISYTAMI 392
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C++ A +L +M + S+ P+ +F L+ GF++ K + +++ M + G+
Sbjct: 393 DGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLV 452
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+Y+ I++ CK+ EA M G + T + + FC+ G EEA+ F
Sbjct: 453 PNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYF 512
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
MS GL PNS + ++ GD A + + G P+ T L+ GL
Sbjct: 513 MNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCI 572
Query: 369 ASKVSEA 375
++EA
Sbjct: 573 GGHINEA 579
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 156/351 (44%), Gaps = 44/351 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV-RT 132
D +AF++ I++ S + ++ L +K++ N ++I+L+G A HA+ R
Sbjct: 700 DTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFN--LATYNILLHGYAK--RHAMARC 755
Query: 133 F---KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIK 189
F K+M H ++++L+L +K + +V + + G D T+N +I
Sbjct: 756 FMLYKDMIRHGFLPDKFSWHSLILGYCQSKSF-DVAIKILRWITLEGHVIDRFTFNMLIT 814
Query: 190 AFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM-------- 241
FCE ++ A+ ++ +M++ + PN ++ AL G + + ++VLQ+
Sbjct: 815 KFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVP 874
Query: 242 -----------MERYG-----------MKS-GVSMYNVR----IHSLCKLRKCAEAKALL 274
M R G MK+ G+S +NV + L +K A +L
Sbjct: 875 TNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVL 934
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
D ML + P T++ ++ +CK+ N +A + IM + + + Y ++ +C
Sbjct: 935 DLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCAN 994
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
GD E A +E + PN + L+ + E+++L+ ++++
Sbjct: 995 GDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P + T N V+ + + +S M K I P+ ++F L+ + K+++
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME G+ YN ++ CK + A L+D M SKG+ + TY+ FI
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDN 254
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C+D + + M + + PN Y T++ + G E A E +PN
Sbjct: 255 LCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPN 314
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ G + EA L+ +V N T+ + GL
Sbjct: 315 SITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGL 360
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 118/256 (46%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+EM + AFN ++ + +V + + K+ + +L TYN ++
Sbjct: 685 ALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDI-LSTMKSKNLCFNLATYNILL 743
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ + + + + +M R P+ S+ +L+ G+ + + ++ K+L+ + G
Sbjct: 744 HGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHV 803
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+N+ I C+ + +A L+ +M + PN TY+ G + +F +A +
Sbjct: 804 IDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRV 863
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+++ SG P + Y T++ MC+ G+ + A+ E G + M ++V GLA
Sbjct: 864 LQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLAN 923
Query: 369 ASKVSEAKELIGLVKE 384
+ K+ A ++ L+ E
Sbjct: 924 SKKIENAIWVLDLMLE 939
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
PD TY +I C+ +A + + +++ + PN + + +LV G K
Sbjct: 628 PDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFC 297
+ + M ++ +NV I + K ++ +L M SK + N TY+ ++G+
Sbjct: 688 IFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYA 747
Query: 298 KDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFT 357
K Y+ M G P+ + +++ C+ ++ A+ + +G V +
Sbjct: 748 KRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRF 807
Query: 358 TMKSLVTGLAGASKVSEAKELIGLVKE-KFTKNVDTWNEIEAGL 400
T L+T +++ +A EL+ + + NVDT+N + GL
Sbjct: 808 TFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGL 851
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N + F L+ + D + +M G+ V N+ + SL K +K +
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
ML+KG+ P+ T++ + C+ G F+ A R M SG+ P + Y T++ + CK
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTW 393
G Y+ A +KG + T + L S+ ++ L+ ++ N T+
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283
Query: 394 NEIEAG 399
N + +G
Sbjct: 284 NTLISG 289
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 139/371 (37%), Gaps = 44/371 (11%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
+++++ + L P + + + +N L + F +S LE ++ + +
Sbjct: 336 RLMDVMVSHGLRP----NEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
I + M E AV+ +M + + V F+ L+ K + + KT G
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT-G 450
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ P+ Y+ +I +C+ A + A M+ + + LVA F + K E+
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M R G+ ++ I+ +A ++ D+M S G P+ TY + G
Sbjct: 511 YFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570
Query: 297 C-----------------------------------KDGNFEEAKKFYRIMSNSGLSPNS 321
C + GN +A M + P++
Sbjct: 571 CIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDN 630
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWV-PNFTTMKSLVTGLAGASKVSEAKELIG 380
Y ++ +CK G AL ++I KG + PN SLV GL K A+ +
Sbjct: 631 FTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLL---KHGHARAALY 687
Query: 381 LVKEKFTKNVD 391
+ +E K+V+
Sbjct: 688 IFEEMLNKDVE 698
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 133 FKEMD-----EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
FKE D + ++ +V +N+++ AL A+ + V K+ G+ PD TYN +
Sbjct: 99 FKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSI 157
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
+ FC S A L +M ++P+ ++ +L+ K + + K+ M + G+
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
K ++ Y + E LLD M+ G+ PN +S + + K EEA
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M GL+PN+ Y T++ +CK G E A+ + ++ I +G P+ SL+ L
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337
Query: 368 GASKVSEAKEL 378
K +A+EL
Sbjct: 338 IFDKWEKAEEL 348
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 130/261 (49%), Gaps = 1/261 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+A + A+ M + + +N+++ + KE VF++ ++ G++PD+
Sbjct: 128 KAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI-VFLKKMRSDGVEPDV 186
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
TYN ++ C++ + A I M ++ +KP+ +++G L+ G+ + +++ +L +
Sbjct: 187 VTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDL 246
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M R G+ ++++ + + K K EA + +M +G+ PN+VTY I CK G
Sbjct: 247 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGR 306
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
E+A ++ M + GL P+S VY ++++ +C +E A E + +G + S
Sbjct: 307 VEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNS 366
Query: 362 LVTGLAGASKVSEAKELIGLV 382
++ +V E+ +L L+
Sbjct: 367 IIDSHCKEGRVIESGKLFDLM 387
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 11/223 (4%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM--DRKSIKPNASSF 219
++ + VF E + GI PD+ +YN ++ C+ + S A +L M D P+ S+
Sbjct: 34 EDARHVFDELLRR-GI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY 91
Query: 220 GALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 279
++ GF+KE D++K+L +R + V YN I +LCK + +A +L M+
Sbjct: 92 STVINGFFKE---GDLDKMLD--QR--ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 280 KGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYET 339
G+ P+ +TY+ ++GFC G +EA F + M + G+ P+ Y +++ ++CK G
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 340 ALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV 382
A +G P+ TT +L+ G A + E L+ L+
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 247
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
PD+ +Y+ VI F + D L +M + I PN ++ +++A K + + +V
Sbjct: 86 PDVVSYSTVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L M + G+ YN +H C + EA L +M S G++P+ VTY+ + CK
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+G EA+K + M+ GL P+ + Y T++ G G + G PN
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 359 MKSLVTGLAGASKVSEA 375
LV A KV EA
Sbjct: 259 FSILVCAYAKQEKVEEA 275
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 39/251 (15%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD H GQ + A+ K+M + V +N+L+ L E
Sbjct: 149 PDCMTYNSIVHGFCSSGQP---KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+++F K G+KPD+ TY +++ + + +L M R I PN F LV
Sbjct: 206 RKIFDSMTKR-GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264
Query: 225 GFYKEEKYEDVNKVLQMMERYGM---------------KSGVS----------------- 252
+ K+EK E+ V M + G+ KSG
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324
Query: 253 ---MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFY 309
+YN IHSLC K +A+ L EML +G+ +++ ++ I CK+G E+ K +
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384
Query: 310 RIMSNSGLSPN 320
+M G+ P+
Sbjct: 385 DLMVRIGVKPD 395
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
F+ L+ A + +E VF + + G+ P+ TY VI C+S A +
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKM-RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 316
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHSLCKLR 265
M + ++P++ + +L+ +K+E ++ L+M++R G+ +N I S CK
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDR-GICLSTIFFNSIIDSHCKEG 375
Query: 266 KCAEAKALLDEMLSKGMKPNSVT 288
+ E+ L D M+ G+KP+ +T
Sbjct: 376 RVIESGKLFDLMVRIGVKPDIIT 398
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,829,164,175
Number of Sequences: 23463169
Number of extensions: 224009141
Number of successful extensions: 731402
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5658
Number of HSP's successfully gapped in prelim test: 3800
Number of HSP's that attempted gapping in prelim test: 639386
Number of HSP's gapped (non-prelim): 47887
length of query: 402
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 257
effective length of database: 8,957,035,862
effective search space: 2301958216534
effective search space used: 2301958216534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)