BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041936
(402 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LE47|PPR87_ARATH Pentatricopeptide repeat-containing protein At1g61870,
mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2
SV=2
Length = 408
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/407 (58%), Positives = 320/407 (78%), Gaps = 6/407 (1%)
Query: 2 GFISRLRTNLNLF----SQKHHRYLAT-SSILSSGDKTPLTSKDKTRAALTLLKSESNPE 56
+SR+R++ +LF + R L++ S+ILS KTPLTSK+K++AAL+LLKSE +P+
Sbjct: 2 ALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPD 61
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAH 115
+ILEICRAA+LTP+ +DR+AFS A+ L+E +F+ +S L+ ++ RPDL++ERF AH
Sbjct: 62 RILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAH 121
Query: 116 SIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY 175
+I+LY QANM +H++R F+++++ ++ +V + NALL A +AKDYKE KRV+IE PK Y
Sbjct: 122 AIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY 181
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI+PDL+TYNR+IK FCES +SS+YSI+AEM+RK IKPN+SSFG +++GFY E+K ++V
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
KVL MM+ G+ GVS YN+RI SLCK +K EAKALLD MLS GMKPN+VTYSH I+G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC + +FEEAKK ++IM N G P+S YFT++Y++CKGGD+ETAL CKES+ K WVP+
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLPQ 402
F+ MKSLV GLA SKV EAKELIG VKEKFT+NV+ WNE+EA LPQ
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
>sp|Q9SAB4|PPR33_ARATH Pentatricopeptide repeat-containing protein At1g11630,
mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1
SV=1
Length = 405
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/402 (50%), Positives = 295/402 (73%), Gaps = 3/402 (0%)
Query: 2 GFISRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDK-TRAALTLLKSESNPEKILE 60
F+ R+RT+ QK ++ SS S LTSK K +R L+LLKSE+NP++ILE
Sbjct: 2 AFLFRIRTS-EFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILE 60
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAHSIIL 119
ICR+ +L+P+ H+DR+ FS+A+ L+ +F +SQ L+ ++ +PD ++E F +IIL
Sbjct: 61 ICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIIL 120
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+ANM + +++TF+ ++++++ +V + NALL A +AKDYKE RV++E PK YGI+P
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL+TYNR+I+ CES +SS+YSI+AEM+RK IKP A+SFG ++ GFYKEEK+++V KV+
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+MM+ +G+ GV+ YN+ I LCK +K AEAKAL+D ++S M+PNSVTYS I+GFC +
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N +EA + +M +G P+S YFT+++ +CKGGD+ETAL C+ES+ K WVP+F+ M
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGLP 401
K LV GLA SKV EAKELI +VKEKFT+NVD WNE+EA LP
Sbjct: 361 KWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402
>sp|Q8GW57|PP134_ARATH Pentatricopeptide repeat-containing protein At1g80150,
mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2
SV=2
Length = 397
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 180/341 (52%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTR 104
AL LKSE +PEK+ + +A A +R AF +++L+ A + I LE KT
Sbjct: 41 ALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTL 100
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
P + E F I+LYG+A MT+ A+ TF MD + + SV +FNA L L+ D +
Sbjct: 101 PQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTI 160
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
+ P YGI D ++N IK+FCE AY + EM++ + P+ ++ L++
Sbjct: 161 WEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS 220
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
YK E+ N + +M G K ++ +NVRI L R+ +A LL M ++P
Sbjct: 221 ALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFC 344
+S+TY+ I GF + A++ Y M G PN +Y TM++++CK G+++ A C
Sbjct: 281 DSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMC 340
Query: 345 KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
K+ + K W PN T++ L+ GL ++ +AK ++ LV +
Sbjct: 341 KDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 36/263 (13%)
Query: 44 AALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKT 103
AAL +L + I E A +D ++F+IAI E +G + E++
Sbjct: 146 AALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREME- 204
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
++ +T V T+ + +H L L + K
Sbjct: 205 ------------------KSGLTPDVV-TYTTLISALYKHERCVIGNGLWNLMVLK---- 241
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
G KP+L T+N I+ + A +L M + ++P++ ++ ++
Sbjct: 242 ------------GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF+ + +V M G K + +Y IH LCK A + + + K
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 284 PNSVTYSHFIYGFCKDGNFEEAK 306
PN T + G K G ++AK
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAK 372
>sp|Q9M065|PP352_ARATH Pentatricopeptide repeat-containing protein At4g36680,
mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=1
SV=1
Length = 412
Score = 194 bits (494), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 203/369 (55%), Gaps = 4/369 (1%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNG 93
P + K A + L+ E +P+K L+I + S + R A + + +L++ F+
Sbjct: 26 PSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSD 85
Query: 94 ISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
I +E K P ++ E F++ I YGQA+M HA+RTF++MD++ S +FNALL
Sbjct: 86 IETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLN 145
Query: 154 ALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSI 212
A +K++ +V ++F E P+ Y I PD +Y +IK++C+S A I+ +M K +
Sbjct: 146 ACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGM 205
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
+ +F +++ YK+ + E + + M + G + + YNVRI S K K
Sbjct: 206 EVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKE 264
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
L++EM S G+KP++++Y++ + +C+ G +EAKK Y + + +PN++ + T+++ +C
Sbjct: 265 LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VD 391
YE K+S+ +P+F T+K LV GL K +AK LI VK+KF + ++
Sbjct: 325 YSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLN 384
Query: 392 TWNEIEAGL 400
W ++E L
Sbjct: 385 AWKKLEEEL 393
>sp|Q9LG23|PPR82_ARATH Pentatricopeptide repeat-containing protein At1g55890,
mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1
SV=1
Length = 398
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 189/365 (51%)
Query: 19 HRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAF 78
R+ + ++++S ++ +L+ E NP++I+E + A + + +
Sbjct: 18 RRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVY 77
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE 138
+ +L A + + + LEE K D+ E F A I LYG+A M E+A + F+EM
Sbjct: 78 DRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPN 137
Query: 139 HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSS 198
+ SV +FNALL A ++K + V+ +F E P IKPD+ +YN +IKA CE
Sbjct: 138 RDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLP 197
Query: 199 SAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRI 258
A ++L E++ K +KP+ +F L+ Y + ++E ++ M + + YN R+
Sbjct: 198 EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARL 257
Query: 259 HSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLS 318
L K E L E+ + G+KP+ +++ I G +G +EA+ +Y+ + G
Sbjct: 258 LGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYR 317
Query: 319 PNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
P+ + + ++ MCK GD+E+A+ KE+ +K ++ TT++ LV L SK EA+E+
Sbjct: 318 PDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Query: 379 IGLVK 383
+ + K
Sbjct: 378 VKIAK 382
>sp|Q9LK58|PP225_ARATH Pentatricopeptide repeat-containing protein At3g13150
OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1
Length = 551
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 159/302 (52%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S I +L EA F+ I + L+ K D+++E F ++LYG + M EHA + F EM
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
E +V +FNALL A +K E + F E P+ GI PDL TYN +IKA C
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
SI E+++ +P+ SF L+ FY+ E + + +++ +M+ + + YN R
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+ L + +K +A L+D M ++G+ P+ TY+ I + D N EE K Y M GL
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
+P++ Y ++ +CK GD + A+ +E+I + K +V L GA K+ EA +
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQ 389
Query: 378 LI 379
L+
Sbjct: 390 LV 391
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
+ +T+ + + + R G ++A + L AK + + V +++ K + D
Sbjct: 65 SKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEV-LQYQKKFDDIKSED 123
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QM 241
R++ + S + A+ + EM + + SF AL++ + +K ++ K ++
Sbjct: 124 FVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL 183
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
E+ G+ + YN I +LC+ + ++ +E+ G +P+ ++++ + F +
Sbjct: 184 PEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRREL 243
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
F E + + +M + LSPN Y + V + + + AL +G P+ T +
Sbjct: 244 FVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNA 303
Query: 362 LVTGLAGASKVSEAKELIGLVKEK 385
L+T + + E + +KEK
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEK 327
>sp|Q9LK57|PP226_ARATH Pentatricopeptide repeat-containing protein At3g13160,
mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1
SV=1
Length = 394
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 189/377 (50%), Gaps = 6/377 (1%)
Query: 7 LRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAA 66
LR N + + + R+ S +++ TP K + +TL+ E +P+ I E + A
Sbjct: 9 LRGNFSFSTHTNRRFF---SAVTAAAATPSPPKP---SLITLVNDERDPKFITEKFKKAC 62
Query: 67 LTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMT 126
+ + + +L+ A F + + LEE P++ E F A I LYG+ M
Sbjct: 63 QAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 122
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E+A + F EM E + + +FNALL A +K + V+ +F E P I+PD+ +YN
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+IK C + A +++ E++ K +KP+ +F L+ Y + K+E+ ++ M
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+K + YN R+ L K E +L D++ +KP+ T++ I GF +G +EA
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+Y+ + +G P V+ +++ +CK GD E+A CKE AK + + ++ +V L
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Query: 367 AGASKVSEAKELIGLVK 383
SK EA+E++ L K
Sbjct: 363 VKGSKQDEAEEIVELAK 379
>sp|Q9ZU67|PP162_ARATH Pentatricopeptide repeat-containing protein At2g18520,
mitochondrial OS=Arabidopsis thaliana GN=At2g18520 PE=2
SV=1
Length = 418
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 191/356 (53%), Gaps = 10/356 (2%)
Query: 49 LKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNGISQYLEELKTRPDL 107
L+ +P+K L I ++ + S L R A + + +L+++ F+ I +E K P +
Sbjct: 40 LRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKI 99
Query: 108 QNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV 167
+ E F + I YG+A+M +HA++ F+EMD+ +V +FNALL A + ++ V ++
Sbjct: 100 KTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQL 159
Query: 168 FIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
F EFP+ Y I PD +Y +IK++C+S A I+ +M+ K ++ +F ++
Sbjct: 160 FDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSL 219
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
YK ++ + M G ++YNVR+ + K K L++EM S G+KP++
Sbjct: 220 YKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDT 278
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL-SPNSSVYFTMVYFMCKGGDYETALGFCK 345
V+Y++ + +C G EAKK Y GL PN++ + T+++ +C G Y+ L K
Sbjct: 279 VSYNYLMTAYCVKGMMSEAKKVYE-----GLEQPNAATFRTLIFHLCINGLYDQGLTVFK 333
Query: 346 ESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDT-WNEIEAGL 400
+S +P+F T K L GL +++ +A+ + +VK+KF + T W ++E L
Sbjct: 334 KSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEKL 389
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 4/370 (1%)
Query: 28 LSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSE 87
+ S K+P+ S + + L+ S+S+P EI A+ P R + I I KL
Sbjct: 40 IVSNPKSPIGSPTRVQK---LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGR 96
Query: 88 ANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGA 147
YFN I L + ++ + I +Y +A + E + TF +M E
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N +L L + Y + + + +G+ P+ +YN +++AFC + D S AY + +M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ + P+ S+ L+ GF ++ + ++L M G Y ++SLC+ +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
EA LL M KG P+ V Y+ I GFC++ +A+K M ++G SPNS Y T+
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKF 386
+ +C G ++ + +E I+KG+ P+F+ LV G KV EA +++ +V K
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 387 TKNVDTWNEI 396
T + DTW +
Sbjct: 397 TLHSDTWEMV 406
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 105 PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEV 164
PD+ + + GQ N A+ +M ++ LL +L +E
Sbjct: 223 PDVDSYKILIQGFCRKGQVN---GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 165 KRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVA 224
++ K G PDL YN +I FC + A +L +M PN+ S+ L+
Sbjct: 280 YKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 225 GFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKP 284
G + +++ K L+ M G S+ N + C K EA +++ ++ G
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 285 NSVTYSHFIYGFCKDGNFEEAKKF 308
+S T+ I C + E+ K F
Sbjct: 399 HSDTWEMVIPLICNEDESEKIKLF 422
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
+N ++L + ++V + + G P+ +Y +I C+ L EM
Sbjct: 298 YNTMILGFCREDRAMDARKVLDDM-LSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
K P+ S LV GF K E+ V++++ + G + + I +C +
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 416
Query: 268 AEAKALLDE 276
+ K L++
Sbjct: 417 EKIKLFLED 425
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+++++ IN L +S L E+ R +E + I Y + A+ E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M H L SV + +L+ ++ A + F++ + G+ P+ TY ++ F +
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ AY +L EM+ P+ ++ AL+ G K ED VL+ M+ G+ V Y+
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ C+ EA + EM+ KG+KP+++TYS I GFC+ +EA Y M
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
GL P+ Y ++ C GD E AL E + KG +P+ T L+ GL S+ EA
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 376 KELI 379
K L+
Sbjct: 575 KRLL 578
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 3/282 (1%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK-DYKEVKRVFIEFPKTYGIK 178
Y + ++ + A+ H V ++NA+L A +K + + VF E ++ +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVS 202
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P++ TYN +I+ FC + + A ++ +M+ K PN ++ L+ G+ K K +D K+
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ M G++ + YNV I+ LC+ + E +L EM +G + VTY+ I G+CK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+GNF +A + M GL+P+ Y ++++ MCK G+ A+ F + +G PN T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
+LV G + ++EA ++ + + F+ +V T+N + G
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A FKEM E ++ +V +N L+ A + +V + +T G P++ TYN +I
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ + +L M K ++PN S+ ++ G +E + ++V+ VL M R G
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN I CK +A + EML G+ P+ +TY+ I+ CK GN A +F
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
M GL PN Y T+V + G A +E G+ P+ T +L+ G
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 369 ASKVSEAKELIGLVKEK-FTKNVDTWNEIEAG 399
K+ +A ++ +KEK + +V +++ + +G
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 152/364 (41%), Gaps = 55/364 (15%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
LTP + ++ I+ + +A N ++L++++ R NER + + + Q
Sbjct: 340 GLTPSV----ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
A R +EM+++ SV +NAL+ + ++ V +E K G+ PD+ +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV-LEDMKEKGLSPDVVSYS 454
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ FC S D A + EM K IKP+ ++ +L+ GF ++ + ++ + + M R
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS--------------- 290
G+ Y I++ C +A L +EM+ KG+ P+ VTYS
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 291 -----------------------------------HFIYGFCKDGNFEEAKKFYRIMSNS 315
I GFC G EA + + M
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
P+ + Y M++ C+ GD A KE + G++ + T+ +LV L KV+E
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 376 KELI 379
+I
Sbjct: 695 NSVI 698
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++P+L +YN VI C +L EM+R+ + ++ L+ G+ KE +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M R+G+ V Y IHS+CK A LD+M +G+ PN TY+ + G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F + G EA + R M+++G SP+ Y ++ C G E A+ ++ KG P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 356 FTTMKSLVTGLAGASKVSEA 375
+ ++++G + V EA
Sbjct: 450 VVSYSTVLSGFCRSYDVDEA 469
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%), Gaps = 2/319 (0%)
Query: 84 KLSEANYFNGISQYLEELKTR--PDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKL 141
KLS A F+ + + +L+ P E + YG A E ++R F + + +
Sbjct: 92 KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 151
Query: 142 RHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
+ SV + N LL L + + V +F +++GI P++ T N ++KA C+ +D SAY
Sbjct: 152 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
+L E+ + PN ++ ++ G+ E +VL+ M G + Y V +
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CKL + +EA ++D+M ++PN VTY I CK+ EA+ + M P+S
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
S+ ++ +C+ + A G ++ + +P+ + +L+ L +V+EA++L
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 382 VKEKFTKNVDTWNEIEAGL 400
++ ++ T+N + AG+
Sbjct: 392 FEKGSIPSLLTYNTLIAGM 410
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 37/307 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
+ N E A + E+ L ++ + +L D + KRV E G PD
Sbjct: 203 KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDA 261
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY-EDVNKVLQ 240
TY ++ +C+ S A +++ +M++ I+PN ++G ++ KE+K E N +
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 241 MMERYGMKSGV----------------------------------SMYNVRIHSLCKLRK 266
M+ER M ++ + IH LCK +
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA+ L DE KG P+ +TY+ I G C+ G EA + + M PN+ Y
Sbjct: 382 VTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
++ + K G+ + + +E + G PN TT L GL K +A +++ +
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Query: 387 TKNVDTW 393
+ ++W
Sbjct: 501 KVDKESW 507
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 4/271 (1%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+KEM K++ +V FN ++ AL + + V +E K YG P++ +YN +I +
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV-MEDMKVYGCSPNVVSYNTLIDGY 268
Query: 192 CESSDSSSAY---SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C+ + Y ++L EM + PN ++F L+ GF+K++ KV + M +K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
V YN I+ LC K +EA ++ D+M+S G++PN +TY+ I GFCK+ +EA
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ + G P + +Y ++ CK G + +E +G VP+ T L+ GL
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 369 ASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ AK+L + K ++ T++ + G
Sbjct: 449 NGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 7/332 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
F++ IN L + N +E++K P++ + G A
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
KEM E+ + ++ FN L+ + +VF E +KP++ +YN +I C
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLC 342
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
S A S+ +M ++PN ++ AL+ GF K + ++ + ++ G
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
MYN+ I + CKL K + AL +EM +G+ P+ TY+ I G C++GN E AKK + +
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
++ GL P+ + ++ C+ G+ A KE G P T ++ G +
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 373 SEAKEL-IGLVKEKFTK-NVDTWNEIEAGLPQ 402
A + + KE+ + NV ++N + G Q
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
YG K + ++ A + + S+ + EM R+ I+PN +F ++ K K
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKL---RKCAEAKALLDEMLSKGMKPNSVTYSH 291
V++ M+ YG V YN I CKL K +A A+L EM+ + PN T++
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I GF KD N + K ++ M + + PN Y +++ +C GG A+ + ++ G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVK 383
PN T +L+ G + EA ++ G VK
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 213 KPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKA 272
K +A S L+ KE + DV V + M R ++ V +NV I++LCK K +A+
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 273 LLDEMLSKGMKPNSVTYSHFIYGFCK---DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
++++M G PN V+Y+ I G+CK +G +A + M + +SPN + + ++
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTK 388
K + ++ KE + + PN + SL+ GL K+SEA + +V
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 389 NVDTWNEIEAGL 400
N+ T+N + G
Sbjct: 365 NLITYNALINGF 376
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM+ + VG +N L+ L + + K++F + + G+ PDL T++ +++ +C
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGL-PDLVTFHILMEGYCR 482
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED-VNKVLQMMERYGMKSGVS 252
+S A +L EM + +KP ++ ++ G+ KE + N QM + ++ V+
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
YNV + + K +A LL+EML KG+ PN +TY
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 38/233 (16%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A+ +M ++ ++ +NAL+ KE +F K G P YN +
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNML 407
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I A+C+ +++ EM+R+ I P+ ++ L+AG + E K+ + G+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG------- 300
V+ +++ + C+ + +A LL EM G+KP +TY+ + G+CK+G
Sbjct: 468 PDLVT-FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 301 -----------------------------NFEEAKKFYRIMSNSGLSPNSSVY 324
E+A M GL PN Y
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G ++ A+ K+M++ K+ V +N ++ AL K+ +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDL---ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E GI+P++ TYN +I+ C S A +L++M + I PN +F AL+
Sbjct: 275 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
PN VTY+ I GFCK +E + +R MS GL N+ Y T+++ + + + A
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ ++ G +P+ T L+ GL KV A + L + K ++ T+N + G+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R +M E K+ +V F+AL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLI 368
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K PN ++ L+ GF K ++ ++ ++ + M + G+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y IH + R+C A+ + +M+S G+ P+ +TYS + G C +G E A
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ + S + P+ Y M+ MCK G E FC S+ KG PN T ++++G
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFC 547
Query: 368 GASKVSEAKELIGLVKEK 385
EA L +KE+
Sbjct: 548 RKGLKEEADALFREMKEE 565
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F +M + + S+ F+ LL A+ + V + E + GI +L TY+
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLG-EQMQNLGISHNLYTYSI 121
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++LA+M + +P+ + +L+ GF + D ++ M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N IH L + + +EA AL+D M+ KG +P+ VTY + G CK G+ + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + P +Y T++ +C + AL E KG PN T SL+ L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T++ +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 10/288 (3%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE----VKRVFIEFPKTY 175
+ N AV +M E + FN L+ L E V R+ ++
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK----- 215
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PDL TY V+ C+ D A S+L +M++ I+P + ++ + D
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ M+ G++ V YN I LC + ++A LL +M+ + + PN VT+S I
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
F K+G EA+K Y M + P+ Y +++ C + A + I+K PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T +L+ G A +V E EL + ++ N T+ + G Q
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + + EM + + + +++L+ + E K +F E + P++ TYN +I
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLI 403
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
K FC++ + EM ++ + N ++ L+ GF++ + ++ V + M G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y++ + LC K A + + + M+P+ TY+ I G CK G E+
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ +S G+ PN Y TM+ C+ G E A +E +G +P+ T +L+
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 369 ASKVSEAKELI 379
+ + ELI
Sbjct: 584 DGDKAASAELI 594
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V +N L+ AK E +F E + G+ + TY
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTT 436
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ + +A + +M + P+ ++ L+ G K E V + ++R
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN VTY+ + GFC+ G EEA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G P+S Y T++ + GD + +E + +V + +T+ LVT +
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNM 615
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ K+M++ K+ V + ++ AL K+ + +F E GI+P++ TYN +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLI 297
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+ C S A +L++M + I PN +F AL+ F KE K + K+ M + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ I+ C + EAK + + M+SK PN VTY+ I GFCK EE +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS GL N+ Y T++ + + GD + A K+ ++ G P+ T L+ GL
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L K K ++ T+N + G+
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 7/295 (2%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
RP++ + YG+ + A R +M E K+ +V F+AL+ A E
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
++++ E K I PD+ TY+ +I FC A + M K PN ++ L+
Sbjct: 344 AEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
GF K ++ E+ ++ + M + G+ YN I L + C A+ + +M+S G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG- 342
P+ +TYS + G CK G E+A + + S + P+ Y M+ MCK G E
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEI 396
FC S+ KG PN ++++G EA L +KE T N T+N +
Sbjct: 523 FCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M + + + FN L+ L + E I+ G +P
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQP 218
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D A S+L +M++ I+ + + ++ Y++VN L
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC---NYKNVNDAL 275
Query: 240 QM---MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
+ M+ G++ V YN I LC + ++A LL +M+ + + PN VT+S I F
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
K+G EA+K Y M + P+ Y +++ C + A + I+K PN
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
T +L+ G A +V E EL + ++ N T+N + GL Q
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F EM + + S+ FN LL A+ + V + E + I DL +YN
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG-ERMQNLRISYDLYSYNI 120
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S A ++L +M + +P+ + +L+ G+ ++ + ++ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +N IH L K +EA AL+D M+++G +P+ TY + G CK G+ + A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M + + +Y T++ +C + AL E KG PN T SL+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T++ +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V +N L+ AK +E +F E + G+ + TYN
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNT 435
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I +M + P+ ++ L+ G K K E V + +++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KPN + Y+ I GFC+ G EEA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+R M G PNS Y T++ + GD + KE + G+V + +T+ ++ L
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
A + + EM + + + +++L+ + E K +F E + P++ TYN +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 401
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IK FC++ + EM ++ + N ++ L+ G ++ + K+ + M G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
+ Y++ + LCK K +A + + + M+P+ TY+ I G CK G E+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ +S G+ PN +Y TM+ C+ G E A +E G +PN T +L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 368 GASKVSEAKELI 379
+ + ELI
Sbjct: 582 RDGDKAASAELI 593
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A E + F+EM + L + +N L+ L A D +++F + G+ P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPP 463
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TY+ ++ C+ A + + + ++P+ ++ ++ G K K ED +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K V +Y I C+ EA AL EM G PNS TY+ I +D
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
G+ + + + M + G ++S +MV M G E
Sbjct: 584 GDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLE 621
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K +A L EM+ P+ V ++ + K F+ M N +S + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
++ C+ AL + + G+ P+ T+ SL+ G ++SEA L+ +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 385 KFTKNVDTWNEIEAGL 400
++ N T+N + GL
Sbjct: 180 EYQPNTVTFNTLIHGL 195
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ EM ++ +V + +L L +E +++F E K +G+ P+L TY+ +I
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDG 278
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
+C++ + AY + E+ + PN FG LV GF K + + M ++G+
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ +YN IH CK EA LL EM S + P+ TY+ I G C + EA + ++
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M N + P+S+ Y ++++ CK + E AL C E A G PN T +L+ G
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN-- 456
Query: 371 KVSEAKELIGLVKEKFTKNV 390
V + K +GL E K +
Sbjct: 457 -VRDIKAAMGLYFEMTIKGI 475
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 53 SNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERF 112
S EK+L+ + + P ++ ++I I L N + E +K L N
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYI----YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
++ I Y + A +KE+ +L +V F L+ A++ + +F+
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K +G+ P+L YN +I C+S + A +L+EM+ ++ P+ ++ L+ G E++
Sbjct: 332 K-FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
+ N++ Q M+ + + YN IH CK +A L EM + G++PN +T+S
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+C + + A Y M+ G+ P+ Y ++ K + + AL + + G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEI 396
PN T LV G ++S A I +E + WN +
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVA---IDFYQEN-NQQRSCWNHV 550
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PD+ Y + + + S +L EM IKPN + + ++ K E+
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
K+ ++M+++G+ + Y+ I CK +A L E+L + PN V + + G
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK A+ + M G+ PN VY +++ CK G+ A+G E + P+
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAG 399
T L+ GL +V+EA L +K E+ + T+N + G
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 7/271 (2%)
Query: 112 FHAHSIILYGQA---NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+ ++ +++G NM E AV EM+ L V + L+ L I E R+F
Sbjct: 339 LYVYNCLIHGHCKSGNMLE-AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
+ K I P TYN +I +C+ + A + +EM ++PN +F L+ G+
Sbjct: 398 QKM-KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ + M G+ V Y I + K EA L +ML G+ PN T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT-MVYFMCKGGDYETALGFCKES 347
++ + GF K+G A FY+ +N S + V FT ++ +C+ G A F +
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQ-ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
+ G P+ + S++ G ++++ L
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMML 606
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E A++ F +M ++ + N LL +VKR F + G +P + TY
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTY 265
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C+ D +A + EM + + P+ ++ +++ GF K + +D + M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
+ V YN I+ CK K EM G+KPN V+YS + FCK+G ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A KFY M GL PN Y +++ CK G+ A E + G N T +L+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 365 GLAGASKVSEAKELIG 380
GL A ++ EA+EL G
Sbjct: 446 GLCDAERMKEAEELFG 461
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 11/264 (4%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRV-----FIEFPKTYGIKPD 180
E A F+EM L +N+++ + +V R+ F E K +PD
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMI------DGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 181 LDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQ 240
+ TYN +I FC+ EM +KPN S+ LV F KE + K
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 241 MMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDG 300
M R G+ Y I + CK+ ++A L +EML G++ N VTY+ I G C
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 301 NFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 360
+EA++ + M +G+ PN + Y +++ K + + AL E +G P+
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 361 SLVTGLAGASKVSEAKELIGLVKE 384
+ + GL K+ AK ++ +KE
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKE 535
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 7/316 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ + + + EE+K PD+ + +G+ + +
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI---GL 352
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
++EM + L+ +V +++ L+ A ++ + +++ + G+ P+ TY +I A
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDA 411
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C+ + S A+ + EM + ++ N ++ AL+ G E+ ++ ++ M+ G+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
++ YN IH K + A LL+E+ +G+KP+ + Y FI+G C E AK
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+ NS +Y T++ K G+ L E T L+ GL
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 371 KVSEAKELIGLVKEKF 386
VS+A + + F
Sbjct: 592 LVSKAVDYFNRISNDF 607
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 21/280 (7%)
Query: 129 AVRTFK-EMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIE----------FPKTYGI 177
A + FK M + +HSV ++ + L A+ Y + V E F +
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184
Query: 178 K----PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ P ++ + + A ++M R + P S L+ F K K +
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
DV + + M G + V YN+ I +CK A+ L +EM +G+ P++VTY+ I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GF K G ++ F+ M + P+ Y ++ CK G L F +E G
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 354 PNFTTMKSLVTGLAGASKVSEAKEL------IGLVKEKFT 387
PN + +LV + +A + +GLV ++T
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R EM + + +V + AL+ L A+ KE + +F + T G+ P+L +YN +I
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALI 479
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
F ++ + A +L E+ + IKP+ +G + G EK E V+ M+ G+K
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEM------------------------LSK---- 280
+ +Y + + K E LLDEM +SK
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 281 --------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
G++ N+ ++ I G CKD E A + M GL P+ + Y +++
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 333 KGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK----ELIG 380
K G+ AL + G + SLV GL+ +++ +A+ E+IG
Sbjct: 660 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 37/293 (12%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
A + A F +MD + ++ ++NAL+ AK+ + E K GIKPDL
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDL 507
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK------------E 229
Y I C +A ++ EM IK N+ + L+ ++K E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 230 EKYEDV----------------NKVL--------QMMERYGMKSGVSMYNVRIHSLCKLR 265
K D+ NK++ ++ +G+++ +++ I LCK
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
+ A L ++M+ KG+ P+ Y+ + G K GN EA M+ G+ + Y
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL 378
++V+ + + A F +E I +G P+ S++ + EA EL
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ N TE + EM E + +V F L+ L K + F +G++
Sbjct: 553 FKSGNPTE-GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ + +I C+ + +A ++ +M +K + P+ +++ +L+ G +K+ + +
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
M GMK + Y + L + +A++ L+EM+ +G+ P+ V
Sbjct: 672 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 107 LQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKR 166
LQN RF A+R KEM E + + +N+L++ L+ AK E +
Sbjct: 463 LQNSRFG--------------DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN----------- 215
+E + G+KP+ TY I + E+S+ +SA + EM + PN
Sbjct: 509 FLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 216 ------------------------ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
A ++ L+ G +K +K +D ++ + M G+ V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y V I+ KL +A ++ DEM+ +G+ PN + Y+ + GFC+ G E+AK+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS GL PN+ Y T++ CK GD A E KG VP+ +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 372 VSEAKELIG 380
V A + G
Sbjct: 748 VERAITIFG 756
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 3/307 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD +S+ I+ L + + + E+ + + I + + + E A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK-TYGIKPDLDTYNRVIKAF 191
F M L A+ +L+ K+ ++ + +E K I P TY V+K
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY--TYGTVVKGM 427
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C S D AY+I+ EM +PN + L+ F + ++ D +VL+ M+ G+ +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN I L K ++ EA++ L EM+ G+KPN+ TY FI G+ + F A K+ +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M G+ PN + ++ CK G A + + +G + + T L+ GL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 372 VSEAKEL 378
V +A+E+
Sbjct: 608 VDDAEEI 614
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 27/347 (7%)
Query: 57 KILEICRA-AALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNER 111
K++E C A ++ + L D +++ +N L + + + + E++ + PD+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV---- 627
Query: 112 FHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFI 169
++ +++ G + + + A F EM E L +V +N LL + + ++ K +
Sbjct: 628 -FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 170 EFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKE 229
E G+ P+ TY +I +C+S D + A+ + EM K + P++ + LV G +
Sbjct: 687 EM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR- 744
Query: 230 EKYEDVNKVLQMM--ERYGMKSGVSMYNVRIHSLCKLRKCAEAKA-----LLDEMLSKGM 282
DV + + + + G S + +N I+ + K K E K L+D +
Sbjct: 745 --LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK-TELKTEVLNRLMDGSFDRFG 801
Query: 283 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG 342
KPN VTY+ I CK+GN E AK+ + M N+ L P Y +++ K G
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 343 FCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
E+IA G P+ ++ ++A + LV + F KN
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA---LVLVDQMFAKN 905
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P TY+ +I C+ A S+L EMD + + ++ L+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M +G+ MY+ I + K +AKAL D M++ G+ P + Y+ I G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+C++ N + + M + + Y T+V MC GD + A KE IA G PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ S+ +A ++ +KE+ ++ +N + GL +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 178 KPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNK 237
KP+ TYN +I C+ + +A + +M ++ P ++ +L+ G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 238 VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-----GMKPNSVTYSHF 292
V G++ MY+V I++ K +A L+D+M +K G K + T
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMC 332
+ GF K G E A+K M P+S+ ++ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 183/409 (44%), Gaps = 54/409 (13%)
Query: 35 PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGI 94
PL K T ++K + +P K LE+ + + I KL F +
Sbjct: 4 PLLPKHVT----AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59
Query: 95 SQYLEELKTRPDLQN---ERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNAL 151
+ L ++ R ++ N E + ++ YG+ + AV F+ MD + +V ++NA+
Sbjct: 60 EEVLVDM--RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117
Query: 152 LLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKS 211
+ L + + + +V++ + GI PD+ ++ +K+FC++S +A +L M +
Sbjct: 118 MSVLVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 212 IKPNASSFGALVAGFYKE----EKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+ N ++ +V GFY+E E YE K+L G+ +S +N + LCK
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS----GVSLCLSTFNKLLRVLCKKGDV 232
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFI---------------------------------- 293
E + LLD+++ +G+ PN TY+ FI
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 294 -YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
YG CK+ F+EA+ + M N GL P+S Y T++ CKGG + A +++ G+
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
VP+ T +SL+ GL + + A L K K NV +N + GL
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 116 SIILY-----GQAN--MTEHAVRTFKEMDEHKLRHSVGAFNAL---LLALTIAKDYKEVK 165
++ILY G +N M A + EM E L V FN L L + D +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 166 RVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG 225
+V I + G PD+ T+N +I + +A IL M + P+ ++ +L+ G
Sbjct: 450 KVMI----SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 226 FYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPN 285
K K+EDV + + M G + +N+ + SLC+ RK EA LL+EM +K + P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 286 SVTYSHFIYGFCKDG------------------------------------NFEEAKKFY 309
+VT+ I GFCK+G N A+K +
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 310 RIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ M + L P+ Y MV CK G+ F E + G++P+ TT+ ++ L
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 370 SKVSEAKELI------GLVKEKFTKNVDT 392
+V EA +I GLV E D
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAVNTICDV 714
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ L T+N++++ C+ D +L ++ ++ + PN ++ + G + + +
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ + G K V YN I+ LCK K EA+ L +M+++G++P+S TY+ I G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+CK G + A++ +G P+ Y +++ +C G+ AL E++ KG PN
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
+L+ GL+ + EA +L + EK V T+N + GL
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 22/320 (6%)
Query: 47 TLLKSESNPEKILEICRAA------ALTPESHLDRLAFSIAINKLSEANYF---NGISQY 97
TL+K SN ILE + A L PE F+I +N L + +G+ +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ----TFNILVNGLCKMGCVSDADGLVKV 451
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ PD+ +I+++G + E+A+ M ++ + V +N+LL L
Sbjct: 452 MISKGYFPDI-----FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+++V + + G P+L T+N ++++ C A +L EM KS+ P+
Sbjct: 507 CKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMER-YGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
A +FG L+ GF K + + + ME Y + S YN+ IH+ + A+ L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
EM+ + + P+ TY + GFCK GN KF M +G P+ + ++ +C
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 335 GDYETALGFCKESIAKGWVP 354
A G + KG VP
Sbjct: 686 DRVYEAAGIIHRMVQKGLVP 705
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 41/374 (10%)
Query: 63 RAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQ 122
R +TP+ + +F+I + + + + + L + ++ N + + + +
Sbjct: 138 RDRGITPDVY----SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 123 ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLD 182
N F +M + + FN LL L D KE +++ + K G+ P+L
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVLPNLF 252
Query: 183 TYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMM 242
TYN I+ C+ + A ++ + + KP+ ++ L+ G K K+++ L M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 243 ERYGMKSGVSMYNVRIHSLCK--LRKCAE------------------------------- 269
G++ YN I CK + + AE
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 270 --AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A AL +E L KG+KPN + Y+ I G G EA + MS GL P + +
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-F 386
V +CK G A G K I+KG+ P+ T L+ G + K+ A E++ ++ +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 387 TKNVDTWNEIEAGL 400
+V T+N + GL
Sbjct: 493 DPDVYTYNSLLNGL 506
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G PD TY +I C +++ A ++ E K IKPN + L+ G + +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G+ V +N+ ++ LCK+ ++A L+ M+SKG P+ T++ I+G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
+ E A + +M ++G+ P+ Y +++ +CK +E + K + KG PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVD 391
T L+ L K+ EA +GL++E K+V+
Sbjct: 531 LFTFNILLESLCRYRKLDEA---LGLLEEMKNKSVN 563
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIKP++ YN +IK A + EM K + P +F LV G K D
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ ++++M G + +N+ IH K A +LD ML G+ P+ TY+ + G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK FE+ + Y+ M G +PN + ++ +C+ + ALG +E K P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKE--KFTKNVDTWNEI 396
T +L+ G + A L ++E K + + T+N I
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 13/245 (5%)
Query: 47 TLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQY---LEELKT 103
T LK E N +IL++ + P+ + ++ +N L + + F + + + E
Sbjct: 473 TQLKME-NALEILDVMLDNGVDPDVY----TYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
P+L S+ Y + + A+ +EM + F L+ D
Sbjct: 528 APNLFTFNILLESLCRYRK---LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F + + Y + TYN +I AF E + + A + EM + + P+ ++ +V
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 224 AGFYKEEKYEDVNK-VLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGM 282
GF K K +L+MME + S ++ V I+ LC + EA ++ M+ KG+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV-INCLCVEDRVYEAAGIIHRMVQKGL 703
Query: 283 KPNSV 287
P +V
Sbjct: 704 VPEAV 708
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
NK SEA + Q ++ +PDL + + G ++ A+ K+M++ K+
Sbjct: 202 NKASEAVAL--VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIE 255
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
V +N ++ L K + +F E GI+PD+ TY+ +I C S A
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L++M + I PN +F AL+ F KE K + K+ M + + + Y+ I+ C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ EAK + + M+SK PN VTYS I GFCK EE + +R MS GL N+
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
Y T+++ + D + A K+ ++ G PN T L+ GL K+++A
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + ++ I+ L + + + E+ RPD+ + YG+ + A
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---DAS 313
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R +M E K+ +V F+AL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLING 372
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K PN ++ L+ GF K ++ E+ ++ + M + G+
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y IH + R C A+ + +M+S G+ PN +TY+ + G CK+G +A +
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ S + P+ Y M+ MCK G E FC S+ KG PN ++++G
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KGVSPNVIAYNTMISGFCRK 551
Query: 370 SKVSEAKELIGLVKE 384
EA L+ +KE
Sbjct: 552 GSKEEADSLLKKMKE 566
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F +M + + S+ FN LL A+ ++ V + E +T GI DL TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG-EQMQTLGISHDLYTYS 122
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
I FC S S A ++LA+M + +P+ + +L+ G+ ++ D ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + IH L K +EA AL+D+M+ +G +P+ VTY + G CK G+ + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M + + +Y T++ +CK + AL E KG P+ T SL++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K NV T++ +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 131/290 (45%), Gaps = 1/290 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S I+ L ++ S+ L ++ R N + I + + A + +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + + +++L+ + E K +F E + P++ TY+ +IK FC+
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCK 410
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + EM ++ + N ++ L+ GF++ ++ V + M G+ +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LCK K A+A + + + M+P+ TY+ I G CK G E+ + + +S
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
G+SPN Y TM+ C+ G E A K+ G +PN T +L+
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A F+ M +V ++ L+ AK +E +F E + G+ + TY
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTT 438
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F ++ D +A + +M + PN ++ L+ G K K V + ++R
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+ PN + Y+ I GFC+ G+ EEA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 617
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+ +I + +S A +++ +M ++ +P+ ++G +V G K +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME+ +++ V +YN I LCK + +A L EM +KG++P+ TYS I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A E I + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
T SL+ G ++ EAK + L+ K NV T++ + G
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
L + K +A L +M+ P+ V ++ + K FE M G+S +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y + C+ AL + + G+ P+ T+ SL+ G + ++S+A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
+V+ + + T+ + GL
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGL 198
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PDL + + G T+ A +M++ KL V +N ++ L K +
Sbjct: 218 QPDLVTYGVVVNGLCKRGD---TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GI+P++ TY+ +I C S A +L++M + I P+ +F AL+
Sbjct: 275 ALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K + K+ M + + + Y+ I+ C + EAK + + M+SK
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VTY+ I GFCK EE + +R MS GL N+ Y ++ + + GD + A
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
KE ++ G PN T +L+ GL K+ +A + L + K + T+N + G+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
L ++ I+ L + + + +E++T RP++ + YG+ + A R
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRL 313
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M E K+ V F+AL+ A E ++++ E K I P + TY+ +I FC
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFC 372
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
A + M K P+ ++ L+ GF K ++ E+ +V + M + G+
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN+ I L + C A+ + EM+S G+ PN +TY+ + G CK+G E+A + +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGS 551
Query: 372 VSEAKELIGLVKEKFT 387
EA L +KE T
Sbjct: 552 KEEADALFKEMKEDGT 567
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK-EVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F EM + + S+ F+ LL A IAK K +V E + GI + TY+
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC S A ++L +M + +PN + +L+ G+ ++ + ++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G + +N IH L K +EA AL+D M++KG +P+ VTY + G CK G+ + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M L P +Y T++ +CK + AL KE KG PN T SL++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
L + S+A L+ +++ K +V T++ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y + AV +M + + FN L+ L + E I+ G +P
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA-MALIDRMVAKGCQP 219
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
DL TY V+ C+ D+ A+++L +M++ ++P + ++ G K + +D +
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 240 QMMERYGMKSGVSMYNVRIHSLC-----------------------------------KL 264
+ ME G++ V Y+ I LC K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 265 RKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 324
K EA+ L DEM+ + + P+ VTYS I GFC +EAK+ + M + P+ Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 325 FTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVK 383
T++ CK E + +E +G V N T L+ GL A A+E+ +V
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 384 EKFTKNVDTWNEIEAGL 400
+ N+ T+N + GL
Sbjct: 460 DGVPPNIMTYNTLLDGL 476
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F+ M V +N L+ K +E VF E + G+ + TYN
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNI 436
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ ++ D A I EM + PN ++ L+ G K K E V + ++R
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M+ + YN+ I +CK K + L + KG+KP+ V Y+ I GFC+ G+ EEA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
++ M G PNS Y T++ + GD E + KE + G+ + +T+ LVT +
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNM 615
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P++ T + ++ +C S S A +++ +M +PN +F L+ G + K +
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G + + Y V ++ LCK A LL++M ++P + Y+ I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I + P+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ EA++L +VK ++ T++ + G
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A+ +M+ K+ V FN ++ +L + + +F E +T GI+P++ TY+
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 299
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C S A +L++M K I PN +F AL+ F KE K+ + K+ M +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + YN ++ C + +AK + + M+SK P+ VTY+ I GFCK E+
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R MS+ GL ++ Y T++ + GD + A K+ ++ G P+ T L+ G
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 366 LAGASKVSEAKEL 378
L K+ +A E+
Sbjct: 480 LCNNGKLEKALEV 492
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ I+ L + + + +E++T RP++ + YG+ + A
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DAS 315
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M E K+ ++ FNAL+ A + E ++++ + K I PD+ TYN ++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNG 374
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K P+ ++ L+ GF K ++ ED ++ + M G+
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L C A+ + +M+S G+ P+ +TYS + G C +G E+A + +
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + + +Y TM+ MCK G + FC S+ KG PN T ++++GL
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSK 553
Query: 370 SKVSEAKELIGLVKE 384
+ EA L+ +KE
Sbjct: 554 RLLQEAYALLKKMKE 568
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ FN LL A+ K + V + E + I L TYN
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG-EKMQRLEIVHGLYTYNI 125
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ G+ ++ D ++ M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + IH L K +EA AL+D M+ +G +PN VTY + G CK G+ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + + ++ T++ +CK + AL KE KG PN T SL++ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A +L+ ++++K N+ T+N +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D+ A ++L +M+ I+ + F ++ K +D +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G++ V Y+ I LC + ++A LL +M+ K + PN VT++ I F K+
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA+K Y M + P+ Y ++V C + A + ++K P+ T
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ G + +V + EL GLV + T
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I + +S A +++ M ++ +PN ++G +V G K +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V ++N I SLCK R +A L EM +KG++PN VTYS I
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G + A + I + P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SLV G ++ +AK++ +V + +V T+N + G
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L ++ SQ L ++ K P+L F+A + E A +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNALIDAFVKEGKFVE-AEKL 352
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+ +M + + + +N+L+ + + K++F EF + PD+ TYN +IK FC
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGFC 411
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM + + + ++ L+ G + + ++ KV + M G+ +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + LC K +A + D M +K + Y+ I G CK G ++ + +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S G+ PN Y TM+ +C + A K+ G +PN T +L+
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 373 SEAKELI 379
+ + ELI
Sbjct: 592 AASAELI 598
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ + V ++ I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I K PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAG 399
T +L+ K EA++L ++K ++ T+N + G
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ A + M + P+ F L++ K +K++ V + + M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R + G+ YN+ I+ C+ + + A ALL +M+ G +P+ VT S + G+C
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G PN T +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
GL A L+ + K +V +N I
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
NE + + + ++ T A+ ++M+E ++ ++ ++ L +F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E + G K D+ TYN +I FC + +L +M ++ I PN +F L+ F K
Sbjct: 287 NEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
E K + +++L+ M + G+ YN I CK + EA ++D M+SKG P+ +T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G+CK ++ + +R MS G+ N+ Y T+V C+ G E A +E +
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLV-KEKFTKNVDTWNEIEAGL 400
++ P+ + K L+ GL ++ +A E+ G + K K ++ + I G+
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 167 VFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
V I+ G +P+ TY V+ C+S ++ A +L +M+ ++IK +A + ++ G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
K+ ++ + ME G K+ + YN I C + + LL +M+ + + PN
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
VT+S I F K+G EA + + M G++PN+ Y +++ CK E A+
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
I+KG P+ T L+ G A+++ + EL + + N T+N + G Q
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Query: 148 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEM 207
N L L +++ + V R+ G KP L T N ++ C + S A ++ M
Sbjct: 165 LNGLCLECRVSEALELVDRMV-----EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 208 DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC 267
+PN ++G ++ K + ++L+ ME +K Y++ I LCK
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 268 AEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTM 327
A L +EM KG K + +TY+ I GFC G +++ K R M +SPN + +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 328 VYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ K G A KE + +G PN T SL+ G +++ EA +++ L+ K
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 73 LDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
LD + +SI I+ L + + E++ + + + I + A + +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M + K+ +V F+ L+ + +E ++ E + GI P+ TYN +I FC
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFC 379
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + A ++ M K P+ +F L+ G+ K + +D ++ + M G+ +
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN + C+ K AK L EM+S+ ++P+ V+Y + G C +G E+A + + +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FC 344
S + + +Y +++ MC + A FC
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 1/292 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ FS+ I+ + Q L+E+ R N + I + + N E A++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + FN L+ A + +F E G+ + TYN +++ FC+S
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSG 452
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + EM + ++P+ S+ L+ G + E ++ +E+ M+ + +Y
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ IH +C K +A L + KG+K ++ Y+ I C+ + +A +R M+
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
G +P+ Y ++ D TA +E + G+ + +T+K ++ L+
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +AN + + F+EM + + +N L+ + + K++F E + ++P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV-SRRVRP 471
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ +Y ++ C++ + A I ++++ ++ + + ++ G K +D +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ G+K YN+ I LC+ ++A L +M +G P+ +TY+ I D
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ A + M +SG + S MV M G+ +
Sbjct: 592 DDATTAAELIEEMKSSGFPADVST-VKMVINMLSSGELD 629
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%)
Query: 197 SSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNV 256
+ A + +M + P F L + K ++YE V + + ME G+ + ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 257 RIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
I+ C+ RK + A + + +++ G +P++V ++ + G C + EA + M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 317 LSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
P T+V +C G A+ + G+ PN T ++ + + + + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 377 ELIGLVKEKFTK 388
EL+ ++E+ K
Sbjct: 249 ELLRKMEERNIK 260
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++S +N + + + +E +K + N + I L + A F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + L+ D + + F E + I PD+ TY +I FC+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQ 398
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D A + EM K ++P++ +F L+ G+ K +D +V M + G V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y I LCK A LL EM G++PN TY+ + G CK GN EEA K
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
+GL+ ++ Y T++ CK G+ + A KE + KG P T L+ G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 374 EAKELIG-LVKEKFTKNVDTWNEI 396
+ ++L+ ++ + N T+N +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSL 602
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKD-YKEVKR--VFIEFPKTYGIKPDL 181
+ A R F++M + L SV + N L L+ KD YK VF EFP+ G+ ++
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLS--KDCYKTATAIIVFREFPEV-GVCWNV 246
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
+YN VI C+ A+ +L M+ K P+ S+ +V G+ + + + V K++++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+R G+K +Y I LC++ K AEA+ EM+ +G+ P++V Y+ I GFCK G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
A KF+ M + ++P+ Y ++ C+ GD A E KG P+ T
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 362 LVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L+ G A + +A + +++ + NV T+ + GL
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T A+ F+E E + +V ++N ++ + KE + + + G PD+ +Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYS 285
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
V+ +C + + ++ M RK +KPN+ +G+++ + K + + M R
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+ +Y I CK A EM S+ + P+ +TY+ I GFC+ G+ EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
K + M GL P+S + ++ CK G + A I G PN T +L+ G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L + A EL+ + K N+ T+N I GL
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 2/328 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ + S++ E+ +R + + I + Q A + F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM L F L+ A K+ RV + G P++ TY +I C+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCK 468
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
D SA +L EM + ++PN ++ ++V G K E+ K++ E G+ +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + + CK + +A+ +L EML KG++P VT++ + GFC G E+ +K M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVS 373
G++PN++ + ++V C + + A K+ ++G P+ T ++LV G A +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 374 EAKELIGLVKEK-FTKNVDTWNEIEAGL 400
EA L +K K F+ +V T++ + G
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y +A + A R M + +V + L+ L D + E K G++P
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQP 489
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C+S + A ++ E + + + ++ L+ + K + + ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M G++ + +NV ++ C + + LL+ ML+KG+ PN+ T++ + +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
N + A Y+ M + G+ P+ Y +V CK + + A +E KG+ + +T
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 360 KSLVTGLAGASKVSEAKEL 378
L+ G K EA+E+
Sbjct: 670 SVLIKGFLKRKKFLEAREV 688
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSII--LYGQANMTEHAVRTF 133
+ ++ I+ L + + ++ L E+ + LQ F +SI+ L N+ E AV+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNI-EEAVKLV 514
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
E + L + L+ A + + + + + E G++P + T+N ++ FC
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+L M K I PNA++F +LV + + + + M G+
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y + CK R EA L EM KG + TYS I GF K F EA++ + M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 314 NSGLSPNSSVY 324
GL+ + ++
Sbjct: 694 REGLAADKEIF 704
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y ++ + A KEM L+ ++ FN L+ + ++ +++ + + GI P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL-LNWMLAKGIAP 594
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+ T+N ++K +C ++ +A +I +M + + P+ ++ LV G K ++ +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
Q M+ G VS Y+V I K +K EA+ + D+M +G+ + + F
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 43/366 (11%)
Query: 74 DRLAFSIAIN------KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--- 124
D + FS +N ++SEA + + E+K RPDL + + L G+ +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAV---ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 125 -----MTEH------------------------AVRTFKEMDEHKLRHSVGAFNALLLAL 155
M E+ A+ F++M+E ++ SV ++ ++ +L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ + +F E + GIK D+ TY+ +I C +L EM ++I P+
Sbjct: 256 CKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
+F AL+ F KE K + ++ M G+ YN I CK EA + D
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
M+SKG +P+ VTYS I +CK ++ + +R +S+ GL PN+ Y T+V C+ G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWN 394
A +E +++G P+ T L+ GL ++++A E+ + K + T + +N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 395 EIEAGL 400
I G+
Sbjct: 495 IIIHGM 500
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + FS I+ + + E+ TR + + I + + N A + F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
M + ++ L+ + AK + R+F E + G+ P+ TYN ++ FC+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQ 432
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S ++A + EM + + P+ ++G L+ G + ++ + M++ M G+ +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ IH +C K +A +L + KG+KP+ VTY+ I G CK G+ EA +R M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
G +P+ Y ++ G +++ +E G+ + +T+K ++ L+
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 13/324 (4%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN--MTEHAVRTF 133
+ +SI I+ L + F+ E++ + +S ++ G N + +
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKG--IKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM + V F+AL+ E K ++ E T GI PD TYN +I FC+
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCK 362
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K +P+ ++ L+ + K ++ +D ++ + + G+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + C+ K AK L EM+S+G+ P+ VTY + G C +G +A + + M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S ++ +Y +++ MC + A FC S KG P+ T ++ GL +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS-DKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 373 SEAKELI------GLVKEKFTKNV 390
SEA L G + FT N+
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNI 565
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 4/262 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A+ F+ M + + + FN L A+ K Y V F + + GI+ D+ T +I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMI 112
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C A+S+L + +P+ +F LV GF E + + ++ M +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + I+ LC + +EA L+D M+ G +P+ VTY + CK GN A
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R M + + Y ++ +CK G ++ AL E KG + T SL+ GL
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 369 ASKVSEAKELIGLVKEKFTKNV 390
K + +++ +E +N+
Sbjct: 293 DGKWDDGAKML---REMIGRNI 311
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T++ ++ FC S A +++ M +P+ + L+ G + + +
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M YG + Y ++ LCK A A L +M + +K + V YS I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CKDG+F++A + M G+ + Y +++ +C G ++ +E I + +P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T +L+ K+ EAKEL ++ + T+N + G
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 167/360 (46%), Gaps = 3/360 (0%)
Query: 43 RAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L LLKSE NP + +A P + + + +LSE N +S+ +E ++
Sbjct: 11 KHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIR 70
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDY 161
++ +E I YG+ +M + A+ FK M E ++ ++N LL A AK +
Sbjct: 71 SQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQW 130
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
+V+ +F F +T G+ P+L TYN +IK C+ + A L M ++ KP+ S+
Sbjct: 131 VKVESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYST 189
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML-SK 280
++ K K +D ++ M G+ V+ YN+ I K + A L D +L
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
+ PN T++ I G K G ++ K + M + + Y ++++ +C G+ + A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAGL 400
E + + T +++ G K+ E+ EL +++ K + N+ ++N + GL
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGL 369
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 129/307 (42%), Gaps = 16/307 (5%)
Query: 79 SIAINKLSEANYFNGISQYLEELKTRPDLQNER---FHAHSIILYG--QANMTEHAVRTF 133
+I I+ LS+ + + E +K QNER + +S +++G A + A F
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMK-----QNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAF 191
E+DE K V +N +L KE ++ +E + I +YN +IK
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV----SYNILIKGL 369
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
E+ A I M K + +++G + G V+Q +E G V
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
Y I LCK ++ EA L+ EM G++ NS + I G +D EA F R
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M +G P Y ++ +CK G + A F KE + GW P+ T L+ GL K
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 372 VSEAKEL 378
+ A EL
Sbjct: 550 IDLALEL 556
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 5/296 (1%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D+ + I I+ L Y N ++E+++ + +A I + E A
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM +H + + NAL+ L E E K G +P + +YN +I C+
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN-GCRPTVVSYNILICGLCK 511
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + + EM KP+ ++ L+ G ++ K + ++ + G+++ V M
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
+N+ IH LC + K +A ++ M + N VTY+ + GF K G+ A + M
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMY 631
Query: 314 NSGLSPNSSVYFTMV--YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
GL P+ Y T++ MC+G Y A+ F ++ G P T LV +
Sbjct: 632 KMGLQPDIISYNTIMKGLCMCRGVSY--AMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ Y +I C+ A +++ EM + ++ N+ AL+ G ++ + + + L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M + G + V YN+ I LCK K EA A + EML G KP+ TYS + G C+D
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
+ A + + SGL + ++ +++ +C G + A+ + N T
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 360 KSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+L+ G + A + G + K ++ ++N I GL
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 2/264 (0%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
EHK ++ ++N L+ L E ++ P G D TY I C +
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNGYV 410
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A ++ E++ + ++ +++ K+++ E+ + +++ M ++G++ + N
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I L + + EA L EM G +P V+Y+ I G CK G F EA F + M +G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ +C+ + AL + + G + L+ GL K+ +A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 378 LIGLVKEK-FTKNVDTWNEIEAGL 400
++ ++ + T N+ T+N + G
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGF 614
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 5/281 (1%)
Query: 115 HSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
H + + G N A+ +E++ V A+ +++ L K +E + E K
Sbjct: 402 HGLCVNGYVN---KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK- 457
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G++ + N +I S A L EM + +P S+ L+ G K K+ +
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
+ ++ M G K + Y++ + LC+ RK A L + L G++ + + ++ I+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G C G ++A M + + N Y T++ K GD A G P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWN 394
+ + +++ GL VS A E + V TWN
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 4/294 (1%)
Query: 96 QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLAL 155
+ L+++ TR N + I + N E A + + + V FN+L+ L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 156 TIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPN 215
+ ++++ +F E ++ G +PD TYN +I + C A ++L +M+ +
Sbjct: 411 CLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 216 ASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
++ L+ GF K K + ++ ME +G+ YN I LCK R+ +A L+D
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+M+ +G KP+ TY+ + FC+ G+ ++A + M+++G P+ Y T++ +CK G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 336 DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN 389
E A + KG ++ GL K +EA I L +E +N
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA---INLFREMLEQN 640
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTE--H 128
D+ F+ +N L +A + + ++ + PD+ + ++ ++ G + E
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV-----YTYNSVISGLCKLGEVKE 348
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLAL---TIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
AV +M + +N L+ L ++ E+ RV + GI PD+ T+N
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILPDVCTFN 404
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I+ C + + A + EM K +P+ ++ L+ + K ++ +L+ ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G V YN I CK K EA+ + DEM G+ NSVTY+ I G CK E+A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ M G P+ Y +++ C+GGD + A + + G P+ T +L++G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 366 LAGASKVSEAKELIGLVKEK 385
L A +V A +L+ ++ K
Sbjct: 585 LCKAGRVEVASKLLRSIQMK 604
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 149/353 (42%), Gaps = 1/353 (0%)
Query: 49 LKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ 108
L + N K++EI A D F++ I L A+ LE++ + +
Sbjct: 163 LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP 222
Query: 109 NERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
+E+ + Y + + A+R ++M E S + N ++ ++
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 169 IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYK 228
E G PD T+N ++ C++ A I+ M ++ P+ ++ ++++G K
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 229 EEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ ++ +VL M YN I +LCK + EA L + SKG+ P+ T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 289 YSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 348
++ I G C N A + + M + G P+ Y ++ +C G + AL K+
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 349 AKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
G + T +L+ G A+K EA+E+ ++ ++N T+N + GL
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 137/335 (40%), Gaps = 38/335 (11%)
Query: 104 RPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+P+ E I+L G++ + + ++M + F L+ + +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNR-----------------------------------V 187
E+ V +G+KPD YNR +
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
IKA C + A +L +M + P+ +F ++ G+ +E + ++ + M +G
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIYGFCKDGNFEEAK 306
NV +H CK + +A + EM ++ G P+ T++ + G CK G+ + A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ +M G P+ Y +++ +CK G+ + A+ + I + PN T +L++ L
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 367 AGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGL 400
++V EA EL ++ K +V T+N + GL
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 108/289 (37%), Gaps = 74/289 (25%)
Query: 186 RVIKAFCESSDSSSAYSILAEMDRK-SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
+++ + D S+A + +K + P + + ++ + ++D+ K+L+ M+
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK------------------------ 280
+ G S + + I S + E +++D M+ +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 281 ------------GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
G+KP+ T++ I C+ A M + GL P+ + T++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 329 YFMCKGGDYETAL-----------------------GFCKE-------------SIAKGW 352
+ GD + AL GFCKE S G+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 353 VPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
P+ T +LV GL A V A E++ +++E + +V T+N + +GL
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 158/365 (43%), Gaps = 37/365 (10%)
Query: 46 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRP 105
LT LK +PE+ L + H D ++S I KL+++ F+ + Q L ++ R
Sbjct: 53 LTDLKEIEDPEEALSLFHQYQEMGFRH-DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 106 DLQNERFHAHSIILYGQANMTEHA------------VRTFKEMD---------------- 137
E I YG+A + A VRT + ++
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 138 -------EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +LR + +FN L+ D++ +VF E + ++P + TYN +I
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME-VQPSVVTYNSLIGF 230
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C + D A S+L +M +K I+PNA +FG L+ G + +Y + K++ ME G K G
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ Y + + L K + EAK LL EM + +KP+ V Y+ + C + EA +
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G PN++ Y M+ C+ D+++ L +A P T +V GL
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Query: 371 KVSEA 375
+ A
Sbjct: 411 NLDHA 415
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
++M + ++R + F L+ L +Y E K++ + + G KP L Y ++
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM-EYRGCKPGLVNYGILMSDLG 302
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A +L EM ++ IKP+ + LV E + + +VL M+ G K +
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y + I C++ +L+ ML+ P T+ + G K GN + A +M
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 313 SNSGLSPNSSVYFTMVYFMC--KGGDYETAL 341
LS S + ++ +C GG Y AL
Sbjct: 423 GKKNLSFGSGAWQNLLSDLCIKDGGVYCEAL 453
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+D +E +F ++ + G + D +Y+ +I +S + + IL + ++++ S
Sbjct: 60 EDPEEALSLFHQY-QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
F L+ + K + V + + + N I+ L + +AK+ D
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
++PNSV+++ I GF ++E A K + M + P+ Y +++ F+C+ D
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
A ++ I K PN T L+ GL + +EAK+L+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLM 279
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ I+ L + + + +E++T RP++ + YG+ + A
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DAS 240
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+ +M E K+ ++ FNAL+ A + E +++ + K I PD+ TYN +I
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLING 299
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A + M K P+ ++ L+ GF K ++ ED ++ + M G+
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y I L C A+ + +M+S G+ P+ +TYS + G C +G E+A + +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
M S + + +Y TM+ MCK G + FC S+ KG PN T ++++GL
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSK 478
Query: 370 SKVSEAKELIGLVKE 384
+ EA L+ +KE
Sbjct: 479 RLLQEAYALLKKMKE 493
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +M+ K+ V FN ++ +L + + +F E +T GI+P++ TY+ +I
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLI 227
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A +L++M K I PN +F AL+ F KE K+ + K+ M + +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN I+ C + +AK + + M+SK P+ TY+ I GFCK E+ +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS+ GL ++ Y T++ + GD + A K+ ++ G P+ T L+ GL
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 369 ASKVSEAKEL 378
K+ +A E+
Sbjct: 408 NGKLEKALEV 417
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ FN LL A+ K + V + E + GI +L TYN +I FC S S A ++
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLG-EKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L +M + +P+ + +L+ G+ ++ D ++ M G + + IH L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +EA AL+D M+ +G +PN VTY + G CK G+ + A M + + + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LV 382
+ T++ +CK + AL KE KG PN T SL++ L + S+A +L+ ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 383 KEKFTKNVDTWNEI 396
++K N+ T+N +
Sbjct: 248 EKKINPNLVTFNAL 261
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 148
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D A+++L +M+ I+ + F ++ K +D +
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ ME G++ V Y+ I LC + ++A LL +M+ K + PN VT++ I F K+
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G F EA+K + M + P+ Y +++ C + A + ++K P+ T
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 360 KSLVTGLAGASKVSEAKELI------GLVKEKFT 387
+L+ G + +V + EL GLV + T
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ +I + +S A +++ M ++ +PN ++G +V G K +
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V ++N I SLCK R +A L EM +KG++PN VTYS I
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G + A + I + P+
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T SL+ G ++ +AK++ +V + ++DT+N + G
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEEL---KTRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ +S I+ L ++ SQ L ++ K P+L F+A + E A +
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNALIDAFVKEGKFVE-AEKL 277
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
+M + + + +N+L+ + + K++F EF + PDLDTYN +IK FC
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGFC 336
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+S + EM + + + ++ L+ G + + ++ KV + M G+ +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + LC K +A + D M +K + Y+ I G CK G ++ + +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S G+ PN Y TM+ +C + A K+ G +P+ T +L+
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 373 SEAKELI 379
+ + ELI
Sbjct: 517 AASAELI 523
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ + V ++ I
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A ++ M G+ PN Y +++ +C G + A + I K PN
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 356 FTTMKSLVTGLAGASKVSEAKEL-IGLVKEKFTKNVDTWNEIEAG 399
T +L+ K EA++L ++K ++ T+N + G
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
P+ F L++ K +K++ V + + M+R G+ + YN+ I+ C+ + + A AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
L +M+ G +P+ VT S + G+C +A M G P++ + T+++ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDT 392
A+ + +G PN T +V GL + A L+ + K +V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 393 WNEI 396
+N I
Sbjct: 188 FNTI 191
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
+ AV F +M + + S+ FN LL A+ ++ V + E +T GI DL TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG-EQMQTLGISHDLYTYS 122
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
I FC S S A ++LA+M + +P+ + +L+ G+ ++ D ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G K + IH L K +EA AL+D+M+ +G +P+ VTY + G CK G+ + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
M + + N ++ T++ +CK E A+ E KG PN T SL+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 366 LAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
L + S+A L+ ++++K NV T+N +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 8/319 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
NK SEA + Q ++ +PDL + + G ++ A+ +M+ +++
Sbjct: 202 NKASEAVAL--VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDL---ALNLLNKMEAARIK 255
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+V FN ++ +L + + +F E +T GI+P++ TYN +I C S A
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
+L+ M K I PN +F AL+ F+KE K + K+ + M + + YN+ I+ C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
+ EAK + M+SK PN TY+ I GFCK E+ + +R MS GL N+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 323 VYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-L 381
Y T++ + GD ++A K+ ++ + T L+ GL K+ A + L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 382 VKEKFTKNVDTWNEIEAGL 400
K + N+ +N + G+
Sbjct: 495 QKSEMELNIFIYNTMIEGM 513
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 144/326 (44%), Gaps = 13/326 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ F+ I+ L + + E++T RP++ + + YG+ + A R
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS---DASRL 315
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
M E K+ +V FNAL+ A E +++ E + I PD TYN +I FC
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFC 374
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ A + M K PN ++ L+ GF K ++ ED ++ + M + G+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y I + C A+ + +M+S + + +TYS ++G C G + A ++ +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGASK 371
S + N +Y TM+ MCK G A FC SI P+ T ++++GL
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRL 550
Query: 372 VSEAKELIGLVKEKFT-KNVDTWNEI 396
+ EA +L +KE T N T+N +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+ +I + +S A +++ +M ++ +P+ ++G +V G K +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +K+ V ++N I SLCK R A L EM +KG++PN VTY+ I
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A +E I + P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
T L+ G +++ EAK++ +V + N+ T+N + G
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 124 NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDT 183
N + A + FK M ++ +N L+ K ++ +F E + G+ + T
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVT 435
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I+ F ++ D SA + +M + + ++ L+ G K + + + ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ M+ + +YN I +CK K EA D S +KP+ VTY+ I G C +
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EA +R M G PNS Y T++ + D + KE + G+V + +T+ SLV
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLV 611
Query: 364 TGL 366
T +
Sbjct: 612 TNM 614
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T + ++ +C S S A +++ +M KP+ +F L+ G + K +
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y ++ LCK A LL++M + +K N V ++ I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + E A + M G+ PN Y +++ +C G + A + K PN
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 356 FTTMKSLVTGLAGASKVSEAKEL 378
T +L+ K+ EA++L
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKL 350
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
L + K +A L +M+ P+ V ++ + K FE M G+S +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y + C+ AL + + G+ P+ T+ SL+ G + ++S+A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 381 -LVKEKFTKNVDTWNEIEAGL 400
+V+ + + T+ + GL
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGL 198
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTR---PDLQNERFHAHSIILYGQANMTEHAV 130
D + F+ ++ L + N + +E + + PDL + + G+ ++ A+
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL---AL 225
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
+M++ K+ V ++ ++ +L + + +F E GI+PD+ TY+ +I
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISC 284
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
C S A +L++M + I PN +F +L+ F KE K + K+ M + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
+ YN I+ C + EA+ + M+SK P+ VTY+ I GFCK + + +R
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
MS GL N+ Y T+++ + D + A K+ ++ G PN T +L+ GL
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 371 KVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L K K ++ T+N + G+
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 9/315 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKT---RPDLQNERFHAHSIILYGQANMTEHAV 130
D + +S I+ L + + + E+ RPD+ + YG+ + A
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---DAS 295
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
R +M E K+ +V FN+L+ A E +++F E + I P++ TYN +I
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLING 354
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
FC A I M K P+ ++ L+ GF K +K D ++ + M R G+
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
Y IH + C A+ + +M+S G+ PN +TY+ + G CK+G E+A +
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLAGA 369
+ S + P+ Y M MCK G E FC S+ KG P+ ++++G
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL-KGVKPDVIAYNTMISGFCKK 533
Query: 370 SKVSEAKELIGLVKE 384
EA L +KE
Sbjct: 534 GLKEEAYTLFIKMKE 548
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ AV F EM + + S+ F+ LL A+ K + V F E + G+ +L TYN
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYNI 105
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C S S A +IL +M + P+ + +L+ GF + + ++ M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + +H L + K +EA AL++ M+ KG +P+ VTY I G CK G + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + +Y T++ +CK + AL E KG P+ T SL++ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T+N +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+ ++ + + +S A +++ M K +P+ ++GA++ G K + +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME+ +++ V +Y+ I SLCK R +A L EM +KG++P+ TYS I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + +++ K G A E I + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
T SL+ G ++ EA+++ L V + +V T+N + G
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 137/324 (42%), Gaps = 2/324 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +S I+ L ++ S+ L ++ R N I + + A + F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + + ++ +N+L+ + E +++F + PD+ TYN +I FC+
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLINGFCK 392
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ + +M R+ + N ++ L+ GF++ ++ V + M G+ +
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN + LCK K +A + + + M+P+ TY+ G CK G E+ + +S
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG-LAGASKV 372
G+ P+ Y TM+ CK G E A + G +P+ T +L+ L K
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 373 SEAKELIGLVKEKFTKNVDTWNEI 396
+ A+ + + +F + T+ +
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLV 596
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G P + T N ++ FC + S A +++ +M +P+ +F LV G ++ K +
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+++ M G + + Y I+ LCK + A LL++M ++ + V YS I
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A + M N G+ P+ Y +++ +C G + A + + + PN
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T SL+ A K+ EA++L +++ N+ T+N + G
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 266 KCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF 325
K EA L EM+ P+ V +S + K F+ F M G+S N Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 326 TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKE 384
M+ +C+ AL + + G+ P+ T+ SL+ G +++SEA L+ +V+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 385 KFTKNVDTWNEIEAGLPQ 402
+ + T+ + GL Q
Sbjct: 165 GYQPDTVTFTTLVHGLFQ 182
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 114 AHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEF 171
++I+++G Q+ + A++ F EM + K++ + F L+ L KE ++ +
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 172 PKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEK 231
K YG++P + Y +IKA C+ + S A+ + E IK +A+ + L++ K +
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 232 YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
+V+ +L+ M G K YNV I+ C A +LDEM+ KG+KP+ ++Y+
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ F + +EEA + M G SP++ Y + +C+G +E A E + KG
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWN 394
+ P ++ + L + K+ ++I + + D W+
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWS 436
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 119 LYGQANMTEHAVRTFKEMD------EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
L + N A++ F+ D + R+S+ ++ ++ L +K + E+ +V +
Sbjct: 15 LLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLK 74
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
I P + VI F S A + EM + + S +L++ K +
Sbjct: 75 TDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGEL 134
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKC-AEAKALLDEMLSKGMKPNSVTYSH 291
E + + L ++ +G K YN+ IH C C +A L DEM+ K +KP VT+
Sbjct: 135 EKMKERLSSIDEFG-KPDACTYNILIHG-CSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 192
Query: 292 FIYGFCKDGNFEEAKKF-YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK 350
I+G CKD +EA K + ++ G+ P +Y +++ +C+ G+ A E+
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 351 GWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
+ +L++ L A + +E ++ + EK K + T+N + G
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+G+ M E + +++M E+ + ++ +N L+ L A +RVF E ++ IKP
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 255
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +IK +C++ + A L +M+ + + + ++ ++ Y + + +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
Q M+ G++ +++ I LCK K E + + M+ KG KPN Y+ I G+ K
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G+ E+A + M + G P+ Y +V +CK G E AL + G N
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK 385
SL+ GL A +V EA+ L + EK
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 12/269 (4%)
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVF-----IEFPKTYGIKPDLDTYNRVIKAFC 192
+ K H++ + +L+ L +AKD ++ V EFP T + N +IK+F
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMT------VSAANALIKSFG 198
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ + +M I+P ++ L+ G + +V ++ME +K +
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIV 258
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
YN I CK + +A L +M ++G + + +TY I D +F Y+ M
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
G+ + ++ +CK G + I KG PN L+ G A + V
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 373 SEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+A L+ ++ E F +V T++ + GL
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD+ TY+ V+ C++ A + N+ + +L+ G K + ++
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK-GMKPNSVTYSHFIY 294
++ + M G YN I + K RK EA AL M + G TY+ +
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G K+ EEA K + +M + G++P ++ + + +C G A E G +
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 355 NFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
+ + ++ L A ++ EA +L + E+
Sbjct: 572 D-AACEDMINTLCKAGRIKEACKLADGITER 601
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 1/208 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +S+ +N L + Y + N F++ I G+A + A R F
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
+EM E +NAL+ A T + E +F + G + TY ++ +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A + M K I P A+ F AL G K K+L + G+ +
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC 575
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKG 281
++ I++LCK + EA L D + +G
Sbjct: 576 EDM-INTLCKAGRIKEACKLADGITERG 602
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 12/367 (3%)
Query: 45 ALTLLKSESNPEKILEICRAAALTPESHL--DRLAFSIAINKLSEANYFNGISQYLEELK 102
+ L+++E + EK + + +A + D+ +F + +L AN F + +K
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMK 78
Query: 103 TRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYK 162
+ +E YG+ + ++R F +M + S A+ +LA+ + ++
Sbjct: 79 IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAY-VTVLAILVEENQL 137
Query: 163 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSA-YSILAEMDRKSIKPNASSFGA 221
+ F + + G+ P + + N +IKA C + + A I EM ++ P++ ++G
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L++G + + ++ K+ M V Y I+ LC + EA L+EM SKG
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++PN TYS + G CKDG +A + + +M G PN Y T++ +CK + A+
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 342 GFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKN--VDTW 393
+G P+ +++G SK EA + G+ + T N V T
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 394 NEIEAGL 400
NE+ GL
Sbjct: 378 NEVVRGL 384
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F EM E +V + +L+ L +K+ E R ++E K+ GI+P++ TY+
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR-YLEEMKSKGIEPNVFTYSS 267
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
++ C+ S A + M + +PN ++ L+ G KE+K ++ ++L M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYS-------HFIYGFCKD 299
+K +Y I C + K EA LDEM+ G+ PN +T++ + G C
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-- 385
Query: 300 GNF-EEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
N+ A Y M + G+S ++V +CK G+++ A+ E + G +P+ T
Sbjct: 386 ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 359 MKSLVTGLAGASKVSEAKE 377
K L+ + V EA +
Sbjct: 446 WKLLIGHTLDKTIVGEASD 464
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 150/320 (46%), Gaps = 6/320 (1%)
Query: 65 AALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
+ P H +++ I+ L F + L ++ + + N + I Y +
Sbjct: 352 TGIKPNIH----TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
M E AV + M+ KL + +N L+ + +K + + + + PD+ TY
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK--VLPDVVTY 465
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N +I C S + SAY +L+ M+ + + P+ ++ +++ K ++ E+ + +E+
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G+ V MY I CK K EA +L++MLSK PNS+T++ I+G C DG +E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A M GL P S +++ + K GD++ A ++ ++ G P+ T + +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 365 GLAGASKVSEAKELIGLVKE 384
++ +A++++ ++E
Sbjct: 646 TYCREGRLLDAEDMMAKMRE 665
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 140/292 (47%), Gaps = 4/292 (1%)
Query: 95 SQYLEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLL 153
+QY+ ++ L + F S+I+ Y Q + A + F EM R + A+ L+
Sbjct: 238 NQYVSKI-VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 154 ALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIK 213
L +A+ E +F++ K P + TY +IK+ C S S A +++ EM+ IK
Sbjct: 297 GLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 214 PNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 273
PN ++ L+ + K+E ++L M G+ V YN I+ CK +A +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK 333
++ M S+ + PN+ TY+ I G+CK N +A M + P+ Y +++ C+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 334 GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
G++++A +G VP+ T S++ L + +V EA +L +++K
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 2/290 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ IN + +E +++R N R + I Y ++N+ A+ +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNK 452
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M E K+ V +N+L+ + ++ R+ + G+ PD TY +I + C+S
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A + +++K + PN + AL+ G+ K K ++ + +L+ M +N
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
IH LC K EA L ++M+ G++P T + I+ KDG+F+ A ++ M +S
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
G P++ Y T + C+ G A + G P+ T SL+ G
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 11/302 (3%)
Query: 108 QNERFHAHSIILYGQAN----------MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
++ERF ++ G N + + + + EM E K+ ++ +N ++
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ +E + ++ G+ PD TY +I +C+ D SA+ + EM K + N
Sbjct: 231 LGNVEEANQ-YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ G + ++ + M+ V Y V I SLC + +EA L+ EM
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
G+KPN TY+ I C FE+A++ M GL PN Y ++ CK G
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 338 ETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTKNVDTWNEIE 397
E A+ + ++ PN T L+ G ++ L +++ K +V T+N +
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 398 AG 399
G
Sbjct: 470 DG 471
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 93 GISQYLEELKTRPDLQNERFHAHSIILYGQANMT--EHAVRTFKEMDEHKLRHSVGAFNA 150
G+ + E K PD+ ++ ++ GQ + A R M++ L + +
Sbjct: 448 GVLNKMLERKVLPDVV-----TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 151 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRK 210
++ +L +K +E +F + G+ P++ Y +I +C++ A+ +L +M K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 211 SIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 270
+ PN+ +F AL+ G + K ++ + + M + G++ VS + IH L K A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 271 KALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYF 330
+ +MLS G KP++ TY+ FI +C++G +A+ M +G+SP+ Y +++
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 331 MCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
G A K G P+ T SL+ L
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ PDL TY+ +IK + + ++ A+ +L M +P+ +F +L+
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI------------ 714
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE---AKALLDEMLSKGMKPNSVTYSHF 292
+L+M +YG + G LC + E LL++M+ + PN+ +Y
Sbjct: 715 KHLLEM--KYGKQKGSE------PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 293 IYGFCKDGNFEEAKKFYRIMS-NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
I G C+ GN A+K + M N G+SP+ V+ ++ CK + A + I G
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 352 WVPNFTTMKSLVTGL 366
+P + K L+ GL
Sbjct: 827 HLPQLESCKVLICGL 841
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 234 DVNKVLQMMERYGMKSG--VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSH 291
D+ + + ER+ +K + YN ++SL + E K + EML + PN TY+
Sbjct: 164 DLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 292 FIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 351
+ G+CK GN EEA ++ + +GL P+ Y +++ C+ D ++A E KG
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 352 WVPNFTTMKSLVTGLAGASKVSEAKELIGLVKE 384
N L+ GL A ++ EA +L +K+
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 24/221 (10%)
Query: 98 LEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
+ E PDL F S+I YG T A K M + S F L+
Sbjct: 663 MRENGVSPDL----FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF------LS 712
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
+ K E+K + K G +P+L + ++ + + +L +M S+ PNA
Sbjct: 713 LIKHLLEMK-----YGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNA 760
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERY-GMKSGVSMYNVRIHSLCKLRKCAEAKALLD 275
S+ L+ G + KV M+R G+ ++N + CKL+K EA ++D
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 276 EMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSG 316
+M+ G P + I G K G E ++ + G
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Query: 119 LYGQANMTEH--AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG 176
L +NM E V ++M EH + + ++ L+L + + + ++VF + G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
I P +N ++ C+ + A ++ +M P S L+ G YK+ + E
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
V Q + + G + + I + K L + M G K +S TYS I G
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK---TYGIKPDLDTY 184
A+ F +M + + S+ FN LL A+ K Y V I K GI+ DL T+
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD----VVISLGKKMEVLGIRNDLYTF 123
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N VI FC S A SIL +M + +P+ + G+LV GF + + D ++ M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G K + YN I SLCK ++ +A E+ KG++PN VTY+ + G C + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M ++PN Y ++ K G A +E + P+ T SL+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 365 GLAGASKVSEAKELIGLVKEK 385
GL ++ EA ++ L+ K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ + N AV +M E + + A+NA++ +L K + F E + GI+P
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TY ++ C SS S A +L++M +K I PN ++ AL+ F K K + ++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + + Y+ I+ LC + EA + D M+SKG + V+Y+ I GFCK
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K +R MS GL N+ Y T++ + GD + A F + G P+ T
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 360 KSLVTGLAGASKVSEA 375
L+ GL ++ +A
Sbjct: 404 NILLGGLCDNGELEKA 419
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 8/331 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLE---ELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
DR+ +N N + ++ E+ +PD+ S+ + N A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN---DAF 210
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKA 190
FKE++ +R +V + AL+ L + + + R+ + K I P++ TY+ ++ A
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 269
Query: 191 FCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSG 250
F ++ A + EM R SI P+ ++ +L+ G ++ ++ N++ +M G +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 251 VSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYR 310
V YN I+ CK ++ + L EM +G+ N+VTY+ I GF + G+ ++A++F+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 311 IMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGAS 370
M G+SP+ Y ++ +C G+ E AL ++ + + T +++ G+
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 371 KVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
KV EA L + K K ++ T+ + +GL
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVR 257
+ A + ++M + P+ F L++ K +KY+ V + + ME G+++ + +N+
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I+ C + + A ++L +ML G +P+ VT + GFC+ +A M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
P+ Y ++ +CK A F KE KG PN T +LV GL +S+ S+A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 378 LIG-LVKEKFTKNVDTWNEI 396
L+ ++K+K T NV T++ +
Sbjct: 247 LLSDMIKKKITPNVITYSAL 266
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ ++ +N L ++ ++ ++ L ++ + N ++ + + + A F+E
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + + +++L+ L + E ++F + + G D+ +YN +I FC++
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ EM ++ + N ++ L+ GF++ + + M+ +G+ + YN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + LC + +A + ++M + M + VTY+ I G CK G EEA + +S
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 316 GLSPNSSVYFTMVYFMCKGG 335
GL P+ Y TM+ +C G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 11/241 (4%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A + F M V ++N L+ AK ++ ++F E + G+ + TYN
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNT 370
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I+ F ++ D A ++MD I P+ ++ L+ G + E + + M++
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
M + Y I +CK K EA +L + KG+KP+ VTY+ + G C G E +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y M GL N GD + K+ ++ G+ P+ +K + +G+
Sbjct: 491 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPSL--LKDIKSGV 540
Query: 367 A 367
Sbjct: 541 C 541
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 15/342 (4%)
Query: 57 KILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHS 116
K+L+ R TP D + +++ +N + + + ++L ++ + N H+
Sbjct: 260 KLLDEMRDRGCTP----DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN--VITHN 313
Query: 117 IILYGQANMTE--HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKT 174
IIL + A + +M SV FN L+ L + + P+
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ- 372
Query: 175 YGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYED 234
+G +P+ +YN ++ FC+ A L M + P+ ++ ++ K+ K ED
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 235 VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIY 294
++L + G + YN I L K K +A LLDEM +K +KP+++TYS +
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 295 GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G ++G +EA KF+ G+ PN+ + +++ +CK + A+ F I +G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 355 NFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNV 390
N T+ L+ GLA EA EL+ GL+K+ + V
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
+D + V +N +L +L + K+ V + PD+ TY +I+A C S
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR-DCYPDVITYTILIEATCRDS 253
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
A +L EM + P+ ++ LV G KE + ++ K L M G + V +N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ + S+C + +A+ LL +ML KG P+ VT++ I C+ G A M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEA 375
G PNS Y +++ CK + A+ + + +++G P+ T +++T L KV +A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 376 KELIGLVKEKFTKNV-DTWNEIEAGLPQ 402
E++ + K V T+N + GL +
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
+E + G PD+ TYN +I +C++ + ++A S+L DR S+ P+ ++ ++
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSLC 215
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K + +VL M + V Y + I + C+ A LLDEM +G P+ V
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ + G CK+G +EA KF M +SG PN + ++ MC G + A +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+ KG+ P+ T L+ L + A +++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
F+E +G PD+ +I+ FC + A IL ++ P+ ++ +++G+
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
K ++N L +++R + V YN + SLC K +A +LD ML + P+ +
Sbjct: 184 KA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
TY+ I C+D A K M + G +P+ Y +V +CK G + A+ F +
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWN 394
+ G PN T ++ + + +A++L+ ++++ F+ +V T+N
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
E L+ M+ G P+ + + I GFC+ G +A K I+ SG P+ Y M+
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 329 YFMCKGGDYETALGFC-KESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
CK G+ AL + S++ P+ T +++ L + K+ +A E++
Sbjct: 180 SGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVL 227
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVF--IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAY 201
S+ FN +L A+ + Y V ++ IE + I PDL T N ++ FC SSA
Sbjct: 84 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 143
Query: 202 SILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
S L +M + I+P+ + +LV GF +D V ME+ G+K V + + I +L
Sbjct: 144 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 203
Query: 262 CKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
CK R A +L M +G+ PN VTYS I G CK G +A++ M + ++PN
Sbjct: 204 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 263
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL 381
+ ++ K G K I PN T SL+ GL ++V EA +++ L
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323
Query: 382 VKEK-FTKNVDTWNEIEAGL 400
+ K T NV T++ + G
Sbjct: 324 MISKGCTPNVVTYSTLANGF 343
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K GI P++ TY+ +I C+S + A L EMD K I PN +F AL+ + K K
Sbjct: 220 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 279
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
V+ V +MM + + V Y+ I+ LC + EA +LD M+SKG PN VTYS
Sbjct: 280 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 339
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
GF K ++ K M G++ N+ T++ + G + ALG + G
Sbjct: 340 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 399
Query: 353 VPNFTTMKSLVTGLAGASKVSEA 375
+PN + ++ GL +V +A
Sbjct: 400 IPNIRSYNIVLAGLFANGEVEKA 422
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GIK D+ +I C++ A +L M + I PN ++ +L+ G K + D
Sbjct: 188 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 247
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+ L M+ + V ++ I + K K ++ ++ M+ + PN TYS IYG
Sbjct: 248 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 307
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C +EA K +M + G +PN Y T+ K + + + +G N
Sbjct: 308 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 367
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
+ +L+ G A K+ A + G + N+ ++N + AGL
Sbjct: 368 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 36/297 (12%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + +I I+ L + + L+ +K R N ++ I ++ A R
Sbjct: 192 DVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 251
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EMD K+ +V F+AL+ A +V V+ + I P++ TY+ +I C
Sbjct: 252 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVY-KMMIQMSIDPNVFTYSSLIYGLCM 310
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ A +L M K PN ++ L GF+K + +D K+L M + G+ +
Sbjct: 311 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 370
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS--------------------------- 286
N I + K A + M S G+ PN
Sbjct: 371 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 430
Query: 287 --------VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGG 335
+TY+ I+G CK +EA + + + P+ Y M+ + + G
Sbjct: 431 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 487
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 3/198 (1%)
Query: 115 HSIILYGQA--NMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+S ++YG N + A++ M +V ++ L + + ++ + P
Sbjct: 301 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 360
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
+ G+ + + N +IK + ++ A + M + PN S+ ++AG + +
Sbjct: 361 QR-GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E + M++ + Y + IH +CK EA L ++ K ++P+ Y+
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479
Query: 293 IYGFCKDGNFEEAKKFYR 310
I + G EA R
Sbjct: 480 IAELNRAGMRTEADALNR 497
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +M+ K+ +V ++ ++ +L + + +F E + G++P++ TY+ +I
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLI 302
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C S A +L++M + I PN +F AL+ F KE K + K+ M + +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ Y+ I+ C + EAK + + M+SK PN VTY+ I GFCK +E +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+R MS GL N+ Y T+++ + D + A K+ ++ G PN T +L+ GL
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 369 ASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
K+ +A + L + K + T+N + G+
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R +M E K+ +V FNAL+ A E ++++ E K I PD+ TY+ +I
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLI 372
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K PN ++ L+ GF K ++ ++ ++ + M + G+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
Y IH + R C A+ + +M+S G+ PN +TY+ + G CK+G E+A
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ + S + P Y M+ MCK G E FC S+ KG P+ ++++G
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPDVIIYNTMISGFC 551
Query: 368 GASKVSEAKELIGLVKE 384
EA L ++E
Sbjct: 552 RKGLKEEADALFRKMRE 568
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ FN LL A+ K + V + E + GI +L TYN
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG-EKMQRLGISHNLYTYNI 125
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ G+ ++ D ++ M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ + IH L K +EA AL+D M+ +G +PN VTY + G CK G+ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + N +Y T++ +CK + AL E KG PN T SL++ L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K NV T+N +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 2/284 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y AV +M E R F L+ L + E ++ G +P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQP 223
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
+L TY V+ C+ D A+++L +M+ I+ N + ++ K +D +
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
ME G++ V Y+ I LC + ++A LL +M+ + + PN VT++ I F K+
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
G EA+K Y M + P+ Y +++ C + A + I+K PN T
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 360 KSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEIEAGLPQ 402
+L+ G A ++ E EL + ++ N T+ + G Q
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A + + EM + + + +++L+ + E K +F E + P++ TYN +I
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLI 407
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC++ + EM ++ + N ++ L+ GF++ ++ V + M G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ YN + LCK K +A + + + M+P TY+ I G CK G E+
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ +S G+ P+ +Y TM+ C+ G E A ++ G +P+ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +P + T + ++ +C S A +++ +M +P+ +F L+ G + K +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y V ++ LCK A LL++M + ++ N V YS I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A + M N G+ PN Y +++ +C + A + I + PN
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 356 FTTMKSLVTGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ EA++L ++K ++ T++ + G
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +++ S A + M + P+ F L++ K +K++ V + + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
R G+ + YN+ I+ C+ + + A ALL +M+ G +P+ VT S + G+C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G PN T +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 364 TGLAGASKVSEAKELI 379
GL + A L+
Sbjct: 233 NGLCKRGDIDLAFNLL 248
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ +A + V F+EM + L + + L+ A+D + VF + G+ P
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHP 468
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
++ TYN ++ C++ A + + R ++P ++ ++ G K K ED +
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVT 288
+ G+K V +YN I C+ EA AL +M G P+S T
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
+HS+ K +A L M+ P+ ++ + K F+ M G+
Sbjct: 61 LHSM----KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 318 SPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKE 377
S N Y ++ C+ AL + + G+ P+ T+ SL+ G ++S+A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 378 LIG-LVKEKFTKNVDTWNEIEAGL 400
L+ +V+ + + T+ + GL
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGL 200
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 2/276 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A+ +M+ K+ +V ++ ++ +L + + +F E + G++P++ TY+
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYS 292
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I C S A +L++M + I PN +F AL+ F K+ K K+ + M +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+ + Y+ I+ C L + EAK +L+ M+ K PN VTY+ I GFCK ++
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ +R MS GL N+ Y T+++ + D + A K+ ++ G PN T L+ G
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 366 LAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAGL 400
L K+++A + L + ++ T+N + G+
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G KPD T+ +I + +S A +++ M ++ +P+ ++GA+V G K +
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L ME +++ V +Y+ I SLCK R +A L EM +KG++PN +TYS I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C G + +A + M ++PN + ++ K G A +E I + PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAGL 400
T SL+ G ++ EAK+++ L +++ NV T+N + G
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A+ F M + + S+ F+ LL A+ + V F E + GI +L TYN
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYNI 118
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A ++L +M + +P+ + +L+ GF + D ++ M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
K + IH L K +EA AL+D M+ +G +P+ VTY + G CK G+ + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
M + + N +Y T++ +CK + AL E KG PN T SL++ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 367 AGASKVSEAKELIG-LVKEKFTKNVDTWNEI 396
+ S+A L+ +++ K N+ T++ +
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTI 157
+E RP++ + YG+ + A R +M E K+ ++ F+AL+ A
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWS---DASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 158 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNAS 217
+ ++++ E K I P++ TY+ +I FC A +L M RK PN
Sbjct: 336 KGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 277
++ L+ GF K ++ + ++ + M + G+ Y IH + R C A+ + +M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 278 LSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDY 337
+S G+ PN +TY+ + G CK+G +A + + S + P+ Y M+ MCK G +
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 338 E 338
+
Sbjct: 515 K 515
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD+ T N ++ FC + S A +++ +M KP+ +F L+ G + K +
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M + G + + Y ++ LCK A LL++M + ++ N V YS I
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK + ++A + M N G+ PN Y +++ +C G + A + I + PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 356 FTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
T +L+ K+ +A++L ++K N+ T++ + G
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y V++ + A + M + P+ F L++ K K++ V + ME
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G+ + YN+ I+ C+ + + A ALL +M+ G +P+ VT + + GFC
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+A M G P++ + T+++ + A+ + +G P+ T ++V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 364 TGLAGASKVSEAKELI 379
GL A L+
Sbjct: 226 NGLCKRGDTDLALNLL 241
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMD 137
+S IN + Q LE + + L N + I + +A + + F+EM
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 138 EHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDS 197
+ L + + L+ A+D + VF + + G+ P++ TYN ++ C++
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKL 479
Query: 198 SSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+ A + + R +++P+ ++ ++ G K K++
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 38/317 (11%)
Query: 117 IILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAK-DYKEVKRVFIEFPKTY 175
I YG++ + E A+ F M E+ LR ++ +NA++ A ++K+V + F E +
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN- 333
Query: 176 GIKPDLDT-----------------------------------YNRVIKAFCESSDSSSA 200
G++PD T YN ++ A C+ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 201 YSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHS 260
+ ILA+M K I PN S+ ++ GF K ++++ + M G+ YN +
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 261 LCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
K+ + EA +L EM S G+K + VTY+ + G+ K G ++E KK + M + PN
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
Y T++ KGG Y+ A+ +E + G + +L+ L V A LI
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 381 -LVKEKFTKNVDTWNEI 396
+ KE + NV T+N I
Sbjct: 574 EMTKEGISPNVVTYNSI 590
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 3/274 (1%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSII-LYGQANMTEHAVRTFKEMDEHKLRHSVGAFN 149
F ++++ +E++ R +Q +R +S++ + + + E A F EM ++ V ++N
Sbjct: 320 FKQVAKFFDEMQ-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 150 ALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDR 209
LL A+ + + P I P++ +Y+ VI F ++ A ++ EM
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 210 KSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE 269
I + S+ L++ + K + E+ +L+ M G+K V YN + K K E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 270 AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVY 329
K + EM + + PN +TYS I G+ K G ++EA + +R ++GL + +Y ++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 330 FMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
+CK G +A+ E +G PN T S++
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D +++ ++ + + + + L ++ + + N ++ I + +A + A+ F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
EM + ++N LL T +E + E + GIK D+ TYN ++ + +
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM-ASVGIKKDVVTYNALLGGYGK 491
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
+ EM R+ + PN ++ L+ G+ K Y++ ++ + + G+++ V +
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
Y+ I +LCK A +L+DEM +G+ PN VTY+ I F + + + + S
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----S 607
Query: 314 NSGLSPNSS 322
N G P SS
Sbjct: 608 NGGSLPFSS 616
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 218 SFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK-LRKCAEAKALLDE 276
+F AL++ + + +E+ V M+ YG++ + YN I + K + + DE
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M G++P+ +T++ + + G +E A+ + M+N + + Y T++ +CKGG
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 337 YETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG 380
+ A + K +PN + +++ G A A + EA L G
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
YG+ + + F EM + ++ ++ L+ + YKE +F EF K+ G++
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRA 547
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE------ 233
D+ Y+ +I A C++ SA S++ EM ++ I PN ++ +++ F + +
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 234 ------------------DVNKVLQMMERYGMKSGVSMYNVRIHSLCK--LRKCAEAKAL 273
+ N+V+Q+ + +S N R C+ +++ + +
Sbjct: 608 NGGSLPFSSSALSALTETEGNRVIQLFGQLTTES-----NNRTTKDCEEGMQELSCILEV 662
Query: 274 LDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
+M +KPN VT+S + + +FE+A
Sbjct: 663 FRKMHQLEIKPNVVTFSAILNACSRCNSFEDA 694
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 258 IHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGL 317
I +L + K AK + + + G +S I + + G EEA + M GL
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 318 SPNSSVYFTMVYFMCKGG-DYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAK 376
PN Y ++ KGG +++ F E G P+ T SL+ + A+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 377 ELIG-LVKEKFTKNVDTWNEI 396
L + + ++V ++N +
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTL 380
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 2/275 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
E A F EM + S+ F LL A + Y+ V F + + YGI DL ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-YFSQKMELYGISHDLYSFTI 111
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I FC S S A S+L +M + +P+ +FG+L+ GF + D ++ +M + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V +YN I LCK + A LL+EM KG+ + VTY+ + G C G + +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+ R M ++P+ + ++ K G+ + A KE I PN T S++ GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 367 AGASKVSEAKELIGLVKEKFT-KNVDTWNEIEAGL 400
++ +AK+ L+ K NV T+N + +G
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ D+ TYN ++ C S S A +L +M ++SI P+ +F AL+ F K+ ++
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ + M + + YN I+ LC + +AK D M SKG PN VTY+ I G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FCK +E K ++ MS G + + Y T+++ C+ G AL +++ P+
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 356 FTTMKSLVTGLAGASKVSEA 375
T L+ GL ++ A
Sbjct: 386 IITHCILLHGLCVNGEIESA 405
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
S+ F +LL + + + I K+ G +P++ YN +I C++ + + A +
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
L EM++K + + ++ L+ G ++ D ++L+ M + + V + I K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
EA+ L EM+ + PN+VTY+ I G C G +AKK + +M++ G PN
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLV 382
Y T++ CK + + + +G+ + T +L+ G K+ A ++ +V
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 383 KEKFTKNVDTWNEIEAGL 400
+ T ++ T + GL
Sbjct: 379 SRRVTPDIITHCILLHGL 396
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 3/258 (1%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + + V F AL+ + E + ++ E ++ + P+ TYN +I
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSII 288
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
C A M K PN ++ L++GF K ++ K+ Q M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
+ + YN IH C++ K A + M+S+ + P+ +T+ ++G C +G E A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALG-FCKESIAKGWVPNFTTMKSLVTGLA 367
+ M S Y M++ +CK E A FC+ + +G P+ T ++ GL
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV-EGVKPDARTYTIMILGLC 467
Query: 368 GASKVSEAKELIGLVKEK 385
EA ELI +KE+
Sbjct: 468 KNGPRREADELIRRMKEE 485
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
D ++ F S A+++ EM P+ F L+ +YE V Q
Sbjct: 37 DYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQK 96
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
ME YG+ + + + IH C+ + + A ++L +M+ G +P+ VT+ ++GFC
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKS 361
+A +M SG PN VY T++ +CK G+ AL E KG + T +
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 362 LVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEI 396
L+TGL + + S+A ++ ++K +V T+ +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 1/189 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A +TF M +V +N L+ + E ++F + G D+ TYN +I
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF-QRMSCEGFNADIFTYNTLI 358
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
+C+ A I M + + P+ + L+ G + E M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
G+ YN+ IH LCK K +A L + +G+KP++ TY+ I G CK+G EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 309 YRIMSNSGL 317
R M G+
Sbjct: 479 IRRMKEEGI 487
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYN 185
T+ A + F EM E + ++ +N L+ L E +V ++ K+ GI P+L TYN
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV-VDQMKSDGINPNLITYN 342
Query: 186 RVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERY 245
+I FC A S+ ++ + + P+ ++ LV+GF ++ K+++ ME
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 246 GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEA 305
G+K Y + I + + +A L M G+ P+ TYS I+GFC G EA
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 306 KKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 365
+ ++ M PN +Y TM+ CK G AL KE K PN + + ++
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 366 LAGASKVSEAKELI 379
L K EA+ L+
Sbjct: 523 LCKERKSKEAERLV 536
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 1/201 (0%)
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
K+ G+ P L TYN ++ FC D+S A ++ EM+ + IKP+ ++ L+ F + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHF 292
E ++ ME G+ V Y+V IH C + EA L M+ K +PN V Y+
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 293 IYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 352
I G+CK+G+ A K + M L+PN + Y M+ +CK + A ++ I G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 353 VPNFTTMKSLVTGLAGASKVS 373
P+ T++ SL++ S VS
Sbjct: 545 DPS-TSILSLISRAKNDSHVS 564
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G+ P+L TYN V+ C+ + A+ + EM + + N ++ L+ G +E K +
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
NKV+ M+ G+ + YN I C + K +A +L ++ S+G+ P+ VTY+ + G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
FC+ G+ A K + M G+ P+ Y ++ + + E A+ G VP+
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVKEK 385
T L+ G +++EA L + EK
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 132 TFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+F ++ K+ V +F L+ A + ++ + IE + +G P++ Y +I
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE-FGFSPNVVIYTTLIDGC 208
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
C+ + A + EM + + N ++ L+ G +K + ++ + M+ G+ +
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN ++ LCK + +A + DEM +G+ N VTY+ I G C++ EA K
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
M + G++PN Y T++ C G AL C++ ++G P+ T LV+G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 372 VSEAKELIGLVKEKFTK 388
S A +++ ++E+ K
Sbjct: 389 TSGAAKMVKEMEERGIK 405
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 12/308 (3%)
Query: 91 FNGISQYLEELKTRPDLQNERFHAHSIILYG--QANMTEHAVRTFKEMDEHKLRHSVGAF 148
FN + E K++ L ++ I++ G +A E + E+ E +V +
Sbjct: 145 FNQWWSFFNENKSKVVLD---VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIY 201
Query: 149 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMD 208
L+ + ++ K +F E K G+ + TY +I ++ + + +M
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 209 RKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+ PN ++ ++ K+ + +D +V M G+ + YN I LC+ K
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
EA ++D+M S G+ PN +TY+ I GFC G +A R + + GLSP+ Y +V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKEL------IGLV 382
C+ GD A KE +G P+ T L+ A + + +A +L +GLV
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 383 KEKFTKNV 390
+ T +V
Sbjct: 441 PDVHTYSV 448
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 57 KILEICR---AAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFH 113
K L +CR + L+P + ++I ++ +G ++ ++E++ R ++ +
Sbjct: 356 KALSLCRDLKSRGLSP----SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 114 AHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPK 173
I + +++ E A++ M+E L V ++ L+ I E R+F +
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
+P+ YN +I +C+ S A +L EM+ K + PN +S+ ++ KE K +
Sbjct: 472 K-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 234 DVNKVLQMMERYGMKSGVSMYNV 256
+ ++++ M G+ S+ ++
Sbjct: 531 EAERLVEKMIDSGIDPSTSILSL 553
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 133 FKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFC 192
K+M ++ +V FN LL +E ++ E T GI P++ TYN ++ +C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYC 344
Query: 193 ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVS 252
+ S A ++L M R P+ +F +L+ G+ ++ +D KV + + + G+ +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 253 MYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM 312
Y++ + C+ K A+ L EM+S G+ P+ +TY + G C +G E+A + + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 313 SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKV 372
S + +Y T++ MCKGG E A KG PN T +++GL +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 373 SEAKELI 379
SEA L+
Sbjct: 525 SEANILL 531
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 138/298 (46%), Gaps = 5/298 (1%)
Query: 104 RPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKE 163
+PD+ + I G T A+ ++M+E ++ V ++ ++ +L
Sbjct: 190 QPDVVTYNSIVNGICRSGD---TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 164 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALV 223
+F E +T GIK + TYN +++ C++ + +L +M + I PN +F L+
Sbjct: 247 AISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 224 AGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMK 283
F KE K ++ N++ + M G+ + YN + C + +EA +LD M+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 284 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGF 343
P+ VT++ I G+C ++ K +R +S GL N+ Y +V C+ G + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 344 CKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
+E ++ G +P+ T L+ GL K+ +A E+ L K K + + I G+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 147 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
FN L+ L + E V ++ G +PD+ TYN ++ C S D+S A +L +
Sbjct: 160 TFNTLIKGLFLEGKVSEAV-VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M+ +++K + ++ ++ ++ + + + ME G+KS V YN + LCK K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
+ LL +M+S+ + PN +T++ + F K+G +EA + Y+ M G+SPN Y T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI-GLVKEK 385
++ C A + P+ T SL+ G +V + ++ + K
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 386 FTKNVDTWNEIEAGLPQ 402
N T++ + G Q
Sbjct: 399 LVANAVTYSILVQGFCQ 415
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY---GIKPDLDT 183
+ A+ F+EM + S+ F+ A+ K + V ++F K GI ++ T
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV----LDFCKQLELNGIAHNIYT 125
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
N +I FC + AYS+L ++ + +P+ ++F L+ G + E K + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + V YN ++ +C+ + A LL +M + +K + TYS I C+DG +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
A ++ M G+ + Y ++V +CK G + K+ +++ VPN T L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 364 TGLAGASKVSEAKELIG-LVKEKFTKNVDTWNEIEAG 399
K+ EA EL ++ + N+ T+N + G
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 84 KLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
KL EAN + +E+ TR N + + Y N A M +K
Sbjct: 313 KLQEAN------ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSI 203
+ F +L+ + K + +VF K G+ + TY+ +++ FC+S A +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
EM + P+ ++G L+ G K E ++ + +++ M G+ MY I +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K +A L + KG+KPN +TY+ I G CK G+ EA R M G +PN
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 324 YFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
Y T++ + GD + +E + G+ + +++K ++ L
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G +PD T+N +IK S A ++ M +P+ ++ ++V G +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
+L+ ME +K+ V Y+ I SLC+ A +L EM +KG+K + VTY+ + G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
CK G + + + M + + PN + ++ K G + A KE I +G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTWNEIEAG 399
T +L+ G +++SEA ++ L V+ K + ++ T+ + G
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 83 NKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLR 142
N+LSEAN + + K PD+ I Y + ++ F+ + + L
Sbjct: 347 NRLSEAN---NMLDLMVRNKCSPDIVT---FTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 143 HSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYS 202
+ ++ L+ + K + +F E ++G+ PD+ TY ++ C++ A
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 203 ILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC 262
I ++ + + + ++ G K K ED + + G+K V Y V I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 263 KLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSS 322
K +EA LL +M G PN TY+ I +DG+ + K M + G S ++S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 161/342 (47%), Gaps = 14/342 (4%)
Query: 66 ALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANM 125
+ PE++ ++ IN + F+G+ L+ +K + N+ + + L +
Sbjct: 254 GIKPEAY----TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGK 309
Query: 126 TEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--GIKPDLDT 183
A + F EM E + V + +L+ + K +KR F+ F + G+ P T
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLI-SWNCRKG--NMKRAFLLFDELTEKGLSPSSYT 366
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
Y +I C+ + +A ++ EM K + F L+ G+ ++ ++ + + +ME
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
+ G ++ V N +L++ EAK L M+ G+K ++V+Y++ I +CK+GN E
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
EAK+ + MS+ G+ PN+ Y M+Y CK G + A A G P+ T SL+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 364 TGLAGASKVSEAKEL---IGLVKEKFTKNVDTWNEIEAGLPQ 402
G A V EA L +GL + +N T+ + +GL +
Sbjct: 547 HGECIADNVDEAMRLFSEMGL--KGLDQNSVTYTVMISGLSK 586
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 6/281 (2%)
Query: 119 LYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY--G 176
+Y M E +R F M + L S+ + ++ L AK + + F + G
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGL--SIDERSCIVF-LVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+K + + V++ C + + ++ E K IKP A ++ ++ + K+ + V
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
VL++M++ G+ Y + + K K ++A+ L DEM +G++ + Y+ I
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
C+ GN + A + ++ GLSP+S Y ++ +CK G+ A E +KG
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEK-FTKNVDTWNEI 396
+L+ G V EA + ++++K F +V T N I
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G + D+ T N + F A L M +K + S+ L+ + KE E+
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
++ M G++ YNV I++ CK K EA+ L M + GM P+S TY+ I+G
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
C N +EA + + M GL NS Y M+ + K G + A G E KG+ +
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 356 FTTMKSLV 363
+L+
Sbjct: 609 NKVYTALI 616
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 113 HAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFP 172
+ + I +Y + E A R F EM ++ + +N ++ A KE +++
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 173 KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKY 232
G+ PD TY +I C + + A + +EM K + N+ ++ +++G K K
Sbjct: 532 AN-GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 233 EDVNKVLQMMERYGMKSGVSMYNVRIHSL 261
++ + M+R G +Y I S+
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
+ Q N + AV MD +V +N ++ L +D VF K GI+
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRA 217
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D TYN +I S + A +L +M ++ I PN F AL+ F KE + +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 240 QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKD 299
+ M R + V YN I+ C +AK + D M+SKG P+ VTY+ I GFCK
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 300 GNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTM 359
E+ K + M+ GL ++ Y T+++ C+ G A + G P+ T
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 360 KSLVTGLAGASKVSEAKELI-GLVKEKFTKNVDTWNEIEAGL 400
L+ L K+ +A ++ L K + ++ T+N I GL
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 13/367 (3%)
Query: 39 KDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL 98
K R LL+ +NPE L + A + +RL N+L + + S +
Sbjct: 14 KGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR-----NELHCIKFDDAFSLFC 68
Query: 99 EELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIA 158
E L++RP F + + + N + + + +M+ + H + +F L+
Sbjct: 69 EMLQSRPIPSIVDF-TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 127
Query: 159 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASS 218
+ + K G +P + T ++ FC+ + A S++ MD PN
Sbjct: 128 SRLSLALALLGKMMKL-GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 186
Query: 219 FGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 278
+ ++ G K + +V ME+ G+++ YN I L + +A LL +M+
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 279 SKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYE 338
+ + PN + ++ I F K+GN EA+ Y+ M + PN Y +++ C G
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 339 TALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------GLVKEKFTKNVDT 392
A ++KG P+ T +L+TG + +V + +L GLV + FT N
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 393 WNEIEAG 399
+AG
Sbjct: 367 HGYCQAG 373
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 1/282 (0%)
Query: 74 DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTF 133
D + ++ I+ LS + + ++ L ++ R N F I + + A +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 134 KEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCE 193
KEM + +V +N+L+ I + K +F + + G PD+ TYN +I FC+
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCK 336
Query: 194 SSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSM 253
S + EM + + +A ++ L+ G+ + K KV M G+ +
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 254 YNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMS 313
YN+ + LC K +A +++++ M + +TY+ I G C+ +EA +R ++
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 314 NSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
G+ P++ Y TM+ +C+ G A C+ G++P+
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 128 HAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRV 187
+A+ F M++ +R +N L+ L+ + + + R+ + K I P++ + +
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTAL 260
Query: 188 IKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGM 247
I F + + A ++ EM R+S+ PN ++ +L+ GF D + +M G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 248 KSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKK 307
V YN I CK ++ + L EM +G+ ++ TY+ I+G+C+ G A+K
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 308 FYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 367
+ M + G+SP+ Y ++ +C G E AL ++ + T ++ GL
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 368 GASKVSEA 375
K+ EA
Sbjct: 441 RTDKLKEA 448
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 129 AVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVI 188
A R ++M + K+ +V F AL+ + E + ++ E + + P++ TYN +I
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLI 296
Query: 189 KAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMK 248
FC A + M K P+ ++ L+ GF K ++ ED K+ M G+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 249 SGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKF 308
YN IH C+ K A+ + + M+ G+ P+ VTY+ + C +G E+A
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 309 YRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 368
+ S + + Y ++ +C+ + A + KG P+ ++++GL
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 369 ASKVSEAKELIGLVKE 384
EA +L +KE
Sbjct: 477 KGLQREADKLCRRMKE 492
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 145 VGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCESSDSSSAYSI 203
V +N L+ +K ++ ++F E TY G+ D TYN +I +C++ + A +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEM--TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 204 LAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 263
M + P+ ++ L+ K E +++ +++ M + YN+ I LC+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 264 LRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSV 323
K EA L + KG+KP+++ Y I G C+ G EA K R M G P+ +
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 324 Y 324
Y
Sbjct: 502 Y 502
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKP 179
Y QA A + F M + + + +N LL L E V +E + +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC-NNGKIEKALVMVEDLQKSEMDV 427
Query: 180 DLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL 239
D+ TYN +I+ C + A+ + + RK +KP+A ++ +++G ++ + +K+
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 240 QMMERYGMKSGVSMYN 255
+ M+ G +Y+
Sbjct: 488 RRMKEDGFMPSERIYD 503
>sp|Q9LUD6|PP230_ARATH Pentatricopeptide repeat-containing protein At3g14580,
mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2
SV=1
Length = 405
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 3/279 (1%)
Query: 78 FSIAINKLSEANYFNGISQYLEELKTRPDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKE 135
+++ INK +A ++ I + + +K + +E F + + +YG A A+
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + S +FN +L L AK + E+ ++F+ PK G++ D N +IK CES
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL-GVEIDACCLNILIKGLCESG 216
Query: 196 DSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYN 255
+ +A +L E ++ +PN +F L+ GF + K+E+ K+L+ ME+ ++ +N
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 256 VRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNS 315
+ I L K + E LL+ M KG +PN TY +YG EAK+ M +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 316 GLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVP 354
G+ P+ Y MV +C+ ++ + G+VP
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%)
Query: 200 AYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIH 259
A IL M P++ SF ++ + +++++K+ + G++ N+ I
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 260 SLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSP 319
LC+ A LLDE + +PN +T+S I GFC G FEEA K M + P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 320 NSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
++ + ++ + K G E + + KG PN T + ++ GL + EAKE++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 281 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 340
G++ ++ + I G C+ GN E A + PN + ++ C G +E A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 341 LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAG 399
+ + P+ T L++GL +V E +L+ +K K + N T+ E+ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 400 L 400
L
Sbjct: 317 L 317
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 150/310 (48%), Gaps = 9/310 (2%)
Query: 101 LKTRPDLQNE----RFHAHSIILYGQANM--TEHAVRTFKEMDEHKLRHSVGAFNALLLA 154
L+ D++N+ ++++I++ G + + A EM L+ + FN L+ A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 155 LTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKP 214
E +F E P+ G KPD+ T+N +I CE + A +L +M + +
Sbjct: 469 FCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 215 NASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALL 274
N ++ L+ F + + ++ K++ M G YN I LC+ + +A++L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 275 DEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKG 334
++ML G P++++ + I G C+ G EEA +F + M G +P+ + +++ +C+
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 335 GDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGL-VKEKFTKNVDTW 393
G E L ++ A+G P+ T +L++ L V +A L+ +++ F N TW
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 394 N-EIEAGLPQ 402
+ +++ +PQ
Sbjct: 708 SILLQSIIPQ 717
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 7/327 (2%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKE 135
+ + I+ LS+ N N Q LEE+ + + I+ + + A +
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 136 MDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESS 195
M + L+ L K +F PK P++ +N +I F
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHG 367
Query: 196 DSSSAYSILAEM-DRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMY 254
A ++L++M I P+ ++ +L+ G++KE +VL M G K V Y
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 255 NVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSN 314
+ + CKL K EA +L+EM + G+KPN+V ++ I FCK+ EA + +R M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 315 SGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSE 374
G P+ + +++ +C+ + + AL ++ I++G V N T +L+ ++ E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 375 AKELIG-LVKEKFTKNVDTWNEIEAGL 400
A++L+ +V + + T+N + GL
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGL 574
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 20/264 (7%)
Query: 153 LALTIAKDYK------EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAE 206
L ++I +DY + R+ +E Y +P +YN V++ + A ++ +
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 207 MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRK 266
M + I P +FG ++ F + + +L+ M ++G +Y IHSL K +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 267 CAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFT 326
EA LL+EM G P++ T++ I G CK EA K M G +P+ Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 327 MVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI------- 379
++ +CK G + A K+ + P +L+ G ++ +AK ++
Sbjct: 328 LMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 380 GLVKEKFTKN---VDTWNEIEAGL 400
G+V + T N W E GL
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGL 407
Score = 35.4 bits (80), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 122 QANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDL 181
++ M E AV KEM + FN+L+ L A ++ +F + + GI PD
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDT 669
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
T+N ++ C+ A +L E PN ++ L+ +E +
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 174 TYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYE 233
++G+ P+ T+N +I + A + M+ K + P+ S+G L+ G K +++
Sbjct: 326 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 385
Query: 234 DVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFI 293
M+R G+ G Y I LCK EA LL+EM G+ P+ VTYS I
Sbjct: 386 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 294 YGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
GFCK G F+ AK+ + GLSPN +Y T++Y C+ G + A+ + I +G
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 505
Query: 354 PNFTTMKSLVTGLAGASKVSEAKELI 379
+ T LVT L A KV+EA+E +
Sbjct: 506 RDHFTFNVLVTSLCKAGKVAEAEEFM 531
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
++ K+ G+ D+ TYN +I C S+ + Y +L +M ++ I PN ++ L+ GF
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 228 KEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
E K +++L M +G+ +N I EA + M +KG+ P+ V
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 288 TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKES 347
+Y + G CK+ F+ A+ FY M +G+ Y M+ +CK G + A+ E
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 348 IAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G P+ T +L+ G + AKE++
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 164/379 (43%), Gaps = 53/379 (13%)
Query: 61 ICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYL-EELKTRPDLQNERFHAHSIIL 119
+ RA P H+ L E + +G S ++ L T L N + I++
Sbjct: 82 LVRARMYDPARHI-----------LKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILI 130
Query: 120 --YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGI 177
Y + M + ++ F+ M + SV NA+L ++ + + V E K I
Sbjct: 131 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KI 189
Query: 178 KPDLDTYNRVIKAFC-ESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
PD+ T+N +I C E S S+Y ++ +M++ P ++ ++ + K+ +++
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSY-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAE--------------------------- 269
++L M+ G+ + V YN+ IH LC+ + A+
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 270 --------AKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 321
A LL+EMLS G+ PN VT++ I G +GNF+EA K + +M GL+P+
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Query: 322 SVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIG- 380
Y ++ +CK +++ A GF G T ++ GL + EA L+
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 381 LVKEKFTKNVDTWNEIEAG 399
+ K+ ++ T++ + G
Sbjct: 429 MSKDGIDPDIVTYSALING 447
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 139/343 (40%), Gaps = 29/343 (8%)
Query: 74 DRLAFSIAINKLSEANYFNGIS---QYLEELKTRPDLQNERFHAHSIILYGQANMTEHAV 130
D F+I IN L F S Q +E+ P + H Y + + A+
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH---WYCKKGRFKAAI 248
Query: 131 RTFKEMDEHKLRHSVGAFNALLLALT----IAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
M + V +N L+ L IAK Y + + + I P+ TYN
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY-----LLLRDMRKRMIHPNEVTYNT 303
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I F A +L EM + PN +F AL+ G E +++ K+ MME G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ Y V + LCK + A+ M G+ +TY+ I G CK+G +EA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAK----GWVPNFTTMKSL 362
MS G+ P+ Y ++ CK G ++TA KE + + G PN +L
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA----KEIVCRIYRVGLSPNGIIYSTL 479
Query: 363 VTG------LAGASKVSEAKELIGLVKEKFTKNVDTWNEIEAG 399
+ L A ++ EA L G ++ FT NV + +AG
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 127 EHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNR 186
+ A++ F M+ L S ++ LL L ++ ++ R F K G+ TY
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF-DLARGFYMRMKRNGVCVGRITYTG 408
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+I C++ A +L EM + I P+ ++ AL+ GF K +++ +++ + R G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ +Y+ I++ C++ EA + + M+ +G + T++ + CK G EA+
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
+F R M++ G+ PN+ + ++ G+ A E G P F T SL+ GL
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 367 AGASKVSEAKELI 379
+ EA++ +
Sbjct: 589 CKGGHLREAEKFL 601
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
GI PD+ TY+ +I FC+ +A I+ + R + PN + L+ + ++
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV-------- 287
++ + M G +NV + SLCK K AEA+ + M S G+ PN+V
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Query: 288 ---------------------------TYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPN 320
TY + G CK G+ EA+KF + + + +
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612
Query: 321 SSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
+ +Y T++ MCK G+ A+ E + + +P+ T SL++GL K
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 110 ERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVF 168
++ HS++L ++NM E ++ K + FN +L++ A E+ F
Sbjct: 788 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN-MLISKCCANG--EINWAF 844
Query: 169 --IEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGF 226
++ + GI D DT + ++ + + +L EM ++ I P + + L+ G
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 227 YKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNS 286
+ + V + M + + + + +L K K EA LL ML + P
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 287 VTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
+++ ++ CK+GN EA + +MSN GL + Y ++ +C GD A +E
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 347 SIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
G++ N TT K+L+ GL ++I
Sbjct: 1025 MKGDGFLANATTYKALIRGLLARETAFSGADII 1057
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 176 GIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDV 235
G++ D T+N +I C + + + A+ ++ M I + + A+V+ + ++++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 236 NKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYG 295
VL M + G+ Y I+ LC++ A + +EM++ + P +V S +
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 296 FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 355
K G +EA R M L P + + T+++ CK G+ AL G +
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 356 FTTMKSLVTGLAGASKVSEAKELIGLVK-EKFTKNVDTWNEIEAGL 400
+ L+TGL ++ A EL +K + F N T+ + GL
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 162 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGA 221
KE R++ E G D T+N ++ + C++ + A + M I PN SF
Sbjct: 490 KEAIRIY-EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 222 LVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKG 281
L+ G+ + V M + G Y + LCK EA+ L + +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 282 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 341
++V Y+ + CK GN +A + M + P+S Y +++ +C+ G A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 342 GFCKESIAKGWV-PNFTTMKSLVTGLAGASK 371
F KE+ A+G V PN V G+ A +
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 38/351 (10%)
Query: 66 ALTPESHL-DRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQAN 124
A+ E H D F++ + L +A +++ + + L N I YG +
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 125 MTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTY 184
A F EM + + + +LL L +E ++ F++ D Y
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLHAVPAAVDTVMY 616
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAG------------FYKE-EK 231
N ++ A C+S + + A S+ EM ++SI P++ ++ +L++G F KE E
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 232 YEDV--NKVL---------------------QMMERYGMKSGVSMYNVRIHSLCKLRKCA 268
+V NKV+ + M+ G + N I ++ K
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 269 EAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 328
+ LL EM ++ PN TY+ ++G+ K + + YR + +G+ P+ ++V
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 329 YFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELI 379
+C+ E L K I +G + T L++ +++ A +L+
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 847
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
P+L TYN ++ + + D S+++ + + I P+ + +LV G + E K+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
L+ G++ +N+ I C + A L+ M S G+ + T + +
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
+ F+E++ MS G+SP S Y ++ +C+ GD +TA +E IA P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 359 MKSLVTGLAGASKVSEAKELI 379
++V LA K EA L+
Sbjct: 932 ESAMVRALAKCGKADEATLLL 952
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 177 IKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVN 236
+ PD+ +YN VI+ FCE + A + EM + ++G L+ F K K ++
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 237 KVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGF 296
L+ M+ G+++ + +Y I C + KAL DE+L +G P ++TY+ I GF
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 297 CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNF 356
CK G +EA + + M G+ PN Y ++ +C G + AL I K PN
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 357 TTMKSLVTGLAGASKVSEAKELIGLVKEKFTK--NVDTWNEIEAGL 400
T ++ L V++A E++ L+K++ T+ N+ T+N + GL
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI-TYNILLGGL 397
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 184 YNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMME 243
+N ++K C + + A S+L EM R S+ P+ S+ ++ GF + ++ E ++ M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 244 RYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFE 303
G + + + I + CK K EA L EM G++ + V Y+ I GFC G +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 304 EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 363
K + + G SP + Y T++ CK G + A + I +G PN T L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 364 TGLAGASKVSEAKELIGLVKEKFTK-NVDTWNEI 396
GL G K EA +L+ L+ EK + N T+N I
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 5/292 (1%)
Query: 98 LEELKTRPDLQNERFHAHSIIL-YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT 156
L E++ R L + F +++I + + E A+ EM S+ + L+ A
Sbjct: 165 LREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 157 IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNA 216
A E F++ K G++ DL Y +I+ FC+ + ++ E+ + P A
Sbjct: 224 KAGKMDEAMG-FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 217 SSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDE 276
++ L+ GF K + ++ +++ + M G++ V Y I LC + K EA LL+
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 277 MLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGD 336
M+ K +PN+VTY+ I CKDG +A + +M P++ Y ++ +C GD
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 337 YETA--LGFCKESIAKGWVPNFTTMKSLVTGLAGASKVSEAKELIGLVKEKF 386
+ A L + + P+ + +L+ GL +++ +A ++ L+ EK
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 187 VIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYG 246
+++ + + + A+ +LA M ++ N + L+ G + + +L+ M R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 247 MKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAK 306
+ V YN I C+ ++ +A L +EM G + VT+ I FCK G +EA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 307 KFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 366
F + M GL + VY +++ C G+ + E + +G P T +L+ G
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 367 AGASKVSEAKELIGLVKEKFTK-NVDTWNEIEAGL 400
++ EA E+ + E+ + NV T+ + GL
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%)
Query: 185 NRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMER 244
N ++ S + A+S +M N S L+ + + K VL +M +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 245 YGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEE 304
G V +N+ + LC+ +C +A +LL EM + P+ +Y+ I GFC+ E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 305 AKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVT 364
A + M SG S + + ++ CK G + A+GF KE G + SL+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 365 GLAGASKVSEAKELIGLVKEK 385
G ++ K L V E+
Sbjct: 256 GFCDCGELDRGKALFDEVLER 276
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%)
Query: 182 DTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQM 241
DTY +I FC++ + A +L +M ++P+ + L++ KE + ++ +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 242 MERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGN 301
M+R V +N+ I K A++LL M G+ P+ TYS I F K G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 302 FEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWV 353
+EA F+ M +SG P++ + +++ + G+ + K+ + K V
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 76 LAFSIAINKLSEANYFNGISQYLEELK---TRPDLQNERFHAHSIILYGQANMTEHAVRT 132
+ ++I INKL + + +E +K TRPD N ++ L + ++ E +
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD--NITYNILLGGLCAKGDLDEASKLL 410
Query: 133 FKEM-DEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAF 191
+ + D V ++NAL+ L + ++ + G D T N ++ +
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-AGDRVTTNILLNST 469
Query: 192 CESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGV 251
++ D + A + ++ I N+ ++ A++ GF K +L M ++ V
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 252 SMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCKDGNFEEAKKFYRI 311
YN + SLCK +A L +EM P+ V+++ I G K G+ + A+
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 312 MSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGASK 371
MS +GLSP+ Y ++ K G + A+ F + + G+ P+ S+ L
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV---LKYCIS 646
Query: 372 VSEAKELIGLVKEKFTKNV 390
E +L LVK+ K++
Sbjct: 647 QGETDKLTELVKKLVDKDI 665
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 35/326 (10%)
Query: 85 LSEANYFNGISQYLEEL-KTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRH 143
LS+ F + +EE+ KT P+L + + ANM + AV EM ++ L
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 144 SVGAFNALLLALTIAKDYKEVKRVFIE----FP--------------------------- 172
F LL AL KE +VF + FP
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 173 --KTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEE 230
K G++PD+ + ++ + + + AY ++ +M ++ +PN + + L+ + E
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 231 KYED-VNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTY 289
K D +V MERYG ++ + Y I CK + ++LD+M KG+ P+ VTY
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 290 SHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIA 349
+ K FEE + M G P+ +Y ++ CK G+ + A+ E A
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 350 KGWVPNFTTMKSLVTGLAGASKVSEA 375
G P T ++ G + EA
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 120 YGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALT-IAKDYKEVKRVFIEFPKTYGIK 178
Y A A +M + +V + L+ AL K E RVF+E + YG +
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCE 339
Query: 179 PDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKV 238
D+ TY +I FC+ YS+L +M +K + P+ ++ ++ K+E++E+ ++
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 239 LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
++ M+R G + +YNV I CKL + EA L +EM + G+ P T+ I GF
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 299 DGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTT 358
G EA ++ M + G+ F+ P + T
Sbjct: 460 QGFLIEACNHFKEMVSRGI-------FS--------------------------APQYGT 486
Query: 359 MKSLVTGLAGASKVSEAKELIGLVKEKFTK---NVDTW 393
+KSL+ L K+ AK++ + K + NV W
Sbjct: 487 LKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAW 524
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 39/170 (22%)
Query: 168 FIEFPKTYGIKPDLDTYNRVIKAFCESSDSSSAYSILAEMDRKSIKPNASSFGALVAGFY 227
IE K G PDL YN VI+ C+ + A + EM+ + P +F ++ GF
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 228 KEE-KYEDVNKVLQMMER-------YG-MKS----------------------------- 249
+ E N +M+ R YG +KS
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 250 -GVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSVTYSHFIYGFCK 298
VS + + IH+L EA + +M+ + P TY+ + G K
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,684,557
Number of Sequences: 539616
Number of extensions: 5450157
Number of successful extensions: 21928
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 17234
Number of HSP's gapped (non-prelim): 2344
length of query: 402
length of database: 191,569,459
effective HSP length: 120
effective length of query: 282
effective length of database: 126,815,539
effective search space: 35761981998
effective search space used: 35761981998
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)