Query 041947
Match_columns 126
No_of_seqs 110 out of 1142
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 21:22:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 100.0 1.5E-29 5.1E-34 154.9 8.2 98 5-114 1-102 (103)
2 1tq1_A AT5G66040, senescence-a 100.0 1.6E-28 5.4E-33 155.8 9.5 112 3-114 15-129 (129)
3 3eme_A Rhodanese-like domain p 99.9 4.6E-28 1.6E-32 148.1 8.2 98 5-114 1-102 (103)
4 3gk5_A Uncharacterized rhodane 99.9 2.1E-27 7.2E-32 146.5 10.2 102 4-118 2-105 (108)
5 3foj_A Uncharacterized protein 99.9 6.5E-28 2.2E-32 146.8 7.7 96 5-112 1-100 (100)
6 3d1p_A Putative thiosulfate su 99.9 4.6E-27 1.6E-31 150.7 9.6 112 3-114 20-138 (139)
7 3hix_A ALR3790 protein; rhodan 99.9 6.4E-27 2.2E-31 143.8 7.2 95 12-117 2-102 (106)
8 1gmx_A GLPE protein; transfera 99.9 1.6E-26 5.4E-31 142.4 9.0 98 4-114 3-104 (108)
9 3ilm_A ALR3790 protein; rhodan 99.9 2E-26 6.7E-31 148.3 8.0 98 7-115 1-104 (141)
10 2hhg_A Hypothetical protein RP 99.9 1.7E-25 5.8E-30 143.2 10.2 108 4-115 20-134 (139)
11 1qxn_A SUD, sulfide dehydrogen 99.9 1.8E-25 6.2E-30 143.1 9.0 102 4-115 21-130 (137)
12 3nhv_A BH2092 protein; alpha-b 99.9 1.6E-25 5.4E-30 144.5 7.8 101 6-117 16-123 (144)
13 3flh_A Uncharacterized protein 99.9 3.4E-25 1.2E-29 139.6 8.0 98 6-115 15-120 (124)
14 1wv9_A Rhodanese homolog TT165 99.9 6.1E-26 2.1E-30 136.6 4.0 92 5-109 1-94 (94)
15 1t3k_A Arath CDC25, dual-speci 99.9 2.3E-25 8E-30 144.9 6.6 106 3-116 25-143 (152)
16 2k0z_A Uncharacterized protein 99.9 3E-25 1E-29 137.1 5.8 96 5-115 4-103 (110)
17 1e0c_A Rhodanese, sulfurtransf 99.9 6.5E-24 2.2E-28 149.1 11.7 111 6-116 9-131 (271)
18 3i2v_A Adenylyltransferase and 99.9 2.3E-24 7.8E-29 135.7 8.4 102 6-111 1-122 (127)
19 2fsx_A RV0390, COG0607: rhodan 99.9 4.6E-24 1.6E-28 138.1 8.8 108 5-115 4-140 (148)
20 1urh_A 3-mercaptopyruvate sulf 99.9 1.2E-23 4.2E-28 148.3 10.8 112 5-116 3-136 (280)
21 1e0c_A Rhodanese, sulfurtransf 99.9 3.4E-23 1.1E-27 145.4 11.2 108 6-113 147-270 (271)
22 3g5j_A Putative ATP/GTP bindin 99.9 1.2E-23 4.2E-28 133.3 7.9 104 3-109 2-131 (134)
23 3hzu_A Thiosulfate sulfurtrans 99.9 3.1E-23 1.1E-27 148.9 10.7 111 5-115 39-160 (318)
24 1vee_A Proline-rich protein fa 99.9 1.4E-23 4.9E-28 133.7 6.9 112 4-121 3-131 (134)
25 1urh_A 3-mercaptopyruvate sulf 99.9 1.7E-22 5.9E-27 142.5 10.8 109 6-114 152-278 (280)
26 1rhs_A Sulfur-substituted rhod 99.9 2.8E-22 9.6E-27 142.5 11.9 111 5-115 7-143 (296)
27 3aay_A Putative thiosulfate su 99.9 1.7E-22 5.6E-27 142.3 9.8 111 6-116 6-127 (277)
28 3olh_A MST, 3-mercaptopyruvate 99.9 2.8E-22 9.7E-27 143.0 10.5 107 6-112 175-299 (302)
29 1uar_A Rhodanese; sulfurtransf 99.9 9E-23 3.1E-27 144.1 7.5 112 4-115 6-128 (285)
30 1rhs_A Sulfur-substituted rhod 99.9 3.1E-22 1.1E-26 142.3 10.2 110 6-115 160-289 (296)
31 3f4a_A Uncharacterized protein 99.9 9.1E-23 3.1E-27 134.7 6.1 115 3-119 28-163 (169)
32 3olh_A MST, 3-mercaptopyruvate 99.9 8E-22 2.7E-26 140.7 11.2 110 6-115 22-158 (302)
33 4f67_A UPF0176 protein LPG2838 99.9 4.7E-22 1.6E-26 139.3 9.3 99 4-110 120-224 (265)
34 1okg_A Possible 3-mercaptopyru 99.9 3.5E-22 1.2E-26 146.2 9.0 110 5-115 13-144 (373)
35 2jtq_A Phage shock protein E; 99.9 1.5E-22 5.1E-27 119.5 5.7 76 20-107 1-80 (85)
36 1uar_A Rhodanese; sulfurtransf 99.9 1.4E-21 4.6E-26 138.1 11.5 110 6-115 146-283 (285)
37 2j6p_A SB(V)-AS(V) reductase; 99.9 5.3E-22 1.8E-26 129.0 8.4 106 4-115 3-123 (152)
38 3op3_A M-phase inducer phospha 99.9 6.1E-22 2.1E-26 135.3 8.1 102 3-114 54-182 (216)
39 2ouc_A Dual specificity protei 99.9 2.7E-22 9.1E-27 128.2 5.4 110 6-115 1-139 (142)
40 1yt8_A Thiosulfate sulfurtrans 99.9 2.8E-21 9.5E-26 147.1 11.8 101 4-115 5-111 (539)
41 1qb0_A Protein (M-phase induce 99.9 1.5E-21 5.1E-26 133.0 9.2 103 3-115 41-170 (211)
42 1c25_A CDC25A; hydrolase, cell 99.9 7.6E-22 2.6E-26 129.1 7.4 102 3-115 20-148 (161)
43 3hzu_A Thiosulfate sulfurtrans 99.9 3.6E-21 1.2E-25 138.2 11.4 108 6-115 179-309 (318)
44 2vsw_A Dual specificity protei 99.9 5.5E-22 1.9E-26 128.7 6.5 110 6-115 4-134 (153)
45 3aay_A Putative thiosulfate su 99.9 2.5E-21 8.4E-26 136.3 10.1 108 7-115 145-276 (277)
46 2a2k_A M-phase inducer phospha 99.8 2.5E-21 8.6E-26 128.2 8.2 103 3-115 21-150 (175)
47 2eg4_A Probable thiosulfate su 99.8 3.9E-21 1.3E-25 132.2 9.4 96 6-113 121-229 (230)
48 3tp9_A Beta-lactamase and rhod 99.8 1.2E-21 4E-26 147.0 7.2 99 4-114 372-474 (474)
49 1yt8_A Thiosulfate sulfurtrans 99.8 1.1E-20 3.8E-25 143.8 11.4 101 3-115 374-478 (539)
50 2wlr_A Putative thiosulfate su 99.8 7E-21 2.4E-25 141.2 9.6 110 6-115 124-251 (423)
51 2wlr_A Putative thiosulfate su 99.8 1.7E-20 5.8E-25 139.2 10.4 111 6-116 272-408 (423)
52 1hzm_A Dual specificity protei 99.8 8.7E-21 3E-25 123.0 6.0 104 4-108 14-142 (154)
53 3tg1_B Dual specificity protei 99.8 1.5E-19 5.2E-24 118.0 8.9 106 3-111 8-145 (158)
54 2gwf_A Ubiquitin carboxyl-term 99.8 3.5E-19 1.2E-23 116.2 9.2 108 3-113 17-150 (157)
55 1whb_A KIAA0055; deubiqutinati 99.8 4.3E-19 1.5E-23 115.7 9.3 110 3-115 12-147 (157)
56 3ics_A Coenzyme A-disulfide re 99.8 1.4E-19 4.9E-24 138.6 7.1 94 3-108 486-581 (588)
57 3utn_X Thiosulfate sulfurtrans 99.8 5.8E-19 2E-23 127.0 9.8 110 5-115 27-161 (327)
58 3ntd_A FAD-dependent pyridine 99.8 1E-19 3.5E-24 138.5 5.3 93 4-109 471-565 (565)
59 1okg_A Possible 3-mercaptopyru 99.8 6.3E-19 2.2E-23 129.0 6.3 98 18-115 172-295 (373)
60 3tp9_A Beta-lactamase and rhod 99.8 1.1E-18 3.8E-23 130.9 6.8 100 4-115 271-373 (474)
61 2eg4_A Probable thiosulfate su 99.7 5.2E-18 1.8E-22 116.6 8.4 91 18-115 4-104 (230)
62 3utn_X Thiosulfate sulfurtrans 99.7 4.2E-17 1.4E-21 117.4 9.1 104 7-110 185-318 (327)
63 3r2u_A Metallo-beta-lactamase 99.7 1.3E-18 4.4E-23 130.5 0.0 83 13-107 379-465 (466)
64 3r2u_A Metallo-beta-lactamase 99.4 1.4E-13 4.6E-18 103.3 6.6 77 18-105 294-374 (466)
65 2f46_A Hypothetical protein; s 98.3 2.1E-06 7E-11 55.3 6.5 77 8-89 30-121 (156)
66 1v8c_A MOAD related protein; r 95.1 0.0028 9.7E-08 41.2 -0.5 26 21-50 122-147 (168)
67 4erc_A Dual specificity protei 95.1 0.04 1.4E-06 34.2 4.8 80 10-92 25-112 (150)
68 2img_A Dual specificity protei 94.9 0.049 1.7E-06 33.8 4.9 70 18-90 35-110 (151)
69 1xri_A AT1G05000; structural g 92.8 0.49 1.7E-05 29.3 6.5 84 9-93 22-116 (151)
70 1fpz_A Cyclin-dependent kinase 92.1 0.43 1.5E-05 31.5 5.9 74 11-87 62-151 (212)
71 1wrm_A Dual specificity phosph 91.9 0.41 1.4E-05 30.3 5.5 72 21-93 34-108 (165)
72 2hcm_A Dual specificity protei 91.9 0.21 7.1E-06 31.6 4.0 71 21-93 39-114 (164)
73 2nt2_A Protein phosphatase sli 91.9 0.35 1.2E-05 29.8 5.0 71 20-93 30-106 (145)
74 3ezz_A Dual specificity protei 91.2 0.73 2.5E-05 28.3 5.9 73 19-92 29-105 (144)
75 1yz4_A DUSP15, dual specificit 90.4 0.49 1.7E-05 29.7 4.7 71 19-92 33-108 (160)
76 2q05_A Late protein H1, dual s 89.9 0.66 2.2E-05 30.3 5.1 68 21-89 75-145 (195)
77 3f81_A Dual specificity protei 89.4 0.67 2.3E-05 29.7 4.8 34 60-93 104-140 (183)
78 2wgp_A Dual specificity protei 89.2 0.76 2.6E-05 29.9 5.0 72 19-92 51-127 (190)
79 1ywf_A Phosphotyrosine protein 88.0 3.6 0.00012 28.8 8.1 29 5-33 53-82 (296)
80 3s4e_A Dual specificity protei 87.8 1.1 3.8E-05 27.5 4.9 72 19-92 29-105 (144)
81 3cm3_A Late protein H1, dual s 86.9 0.84 2.9E-05 29.2 4.0 28 60-87 98-126 (176)
82 2g6z_A Dual specificity protei 86.2 1.6 5.6E-05 29.0 5.3 73 19-92 31-107 (211)
83 3s4o_A Protein tyrosine phosph 84.8 1.2 4E-05 27.8 3.9 22 69-90 108-130 (167)
84 2pq5_A Dual specificity protei 83.9 6.6 0.00023 25.6 7.4 25 69-93 130-156 (205)
85 3rz2_A Protein tyrosine phosph 83.7 3 0.0001 26.8 5.6 23 68-90 115-138 (189)
86 3rgo_A Protein-tyrosine phosph 83.4 1.7 5.7E-05 26.8 4.1 31 62-92 81-113 (157)
87 2e0t_A Dual specificity phosph 82.9 1.5 5.1E-05 27.0 3.7 25 69-93 84-110 (151)
88 3v0d_A Voltage-sensor containi 82.2 1.9 6.5E-05 30.9 4.5 81 9-92 51-143 (339)
89 1zzw_A Dual specificity protei 80.5 2.4 8.1E-05 26.0 4.0 26 67-92 80-107 (149)
90 2r0b_A Serine/threonine/tyrosi 79.4 2.5 8.5E-05 26.1 3.9 74 19-92 33-114 (154)
91 2hxp_A Dual specificity protei 78.6 2.9 0.0001 26.0 4.0 26 67-92 82-109 (155)
92 2i6j_A Ssoptp, sulfolobus solf 75.0 8.8 0.0003 23.5 5.6 22 11-32 19-41 (161)
93 2oud_A Dual specificity protei 74.5 4.3 0.00015 25.8 4.0 30 63-92 80-111 (177)
94 2esb_A Dual specificity protei 74.0 4.1 0.00014 26.2 3.9 72 19-92 45-121 (188)
95 2y96_A Dual specificity phosph 73.0 6.2 0.00021 26.2 4.7 33 61-93 129-164 (219)
96 1ohe_A CDC14B, CDC14B2 phospha 71.9 6.1 0.00021 28.3 4.7 21 68-88 267-288 (348)
97 1p8a_A Protein tyrosine phosph 70.6 1.5 5E-05 27.4 1.0 35 71-105 5-43 (146)
98 2gi4_A Possible phosphotyrosin 70.3 3.4 0.00012 26.0 2.7 35 71-105 2-45 (156)
99 3n0a_A Tyrosine-protein phosph 69.1 9.7 0.00033 27.5 5.2 71 11-85 50-131 (361)
100 3emu_A Leucine rich repeat and 67.6 8.1 0.00028 24.1 4.1 26 68-93 85-112 (161)
101 2jgn_A DBX, DDX3, ATP-dependen 67.4 9.9 0.00034 24.2 4.6 36 68-103 44-81 (185)
102 2wmy_A WZB, putative acid phos 67.2 8.1 0.00028 24.1 4.0 34 71-104 9-45 (150)
103 4etn_A LMPTP, low molecular we 66.0 5.6 0.00019 25.9 3.2 37 70-106 34-77 (184)
104 1jl3_A Arsenate reductase; alp 64.6 6.4 0.00022 24.1 3.1 34 71-104 4-41 (139)
105 2cwd_A Low molecular weight ph 64.5 5 0.00017 25.4 2.7 37 70-106 4-49 (161)
106 2wja_A Putative acid phosphata 64.1 9.6 0.00033 24.3 4.0 34 71-104 27-63 (168)
107 1u2p_A Ptpase, low molecular w 64.0 4.5 0.00015 25.6 2.4 35 71-105 5-48 (163)
108 2j16_A SDP-1, tyrosine-protein 63.5 9.7 0.00033 24.5 4.0 32 61-92 108-141 (182)
109 2fek_A Low molecular weight pr 62.7 11 0.00037 24.1 4.0 34 71-104 23-59 (167)
110 1d1q_A Tyrosine phosphatase (E 62.6 4.1 0.00014 25.8 2.0 36 70-105 7-52 (161)
111 2hjv_A ATP-dependent RNA helic 61.9 13 0.00045 22.9 4.3 34 69-102 34-69 (163)
112 1rxd_A Protein tyrosine phosph 60.9 10 0.00035 23.0 3.7 24 68-91 94-118 (159)
113 1d5r_A Phosphoinositide phosph 60.4 16 0.00053 25.8 4.9 76 10-88 44-130 (324)
114 3rh0_A Arsenate reductase; oxi 60.3 12 0.00041 23.4 3.8 34 70-103 20-57 (148)
115 1jf8_A Arsenate reductase; ptp 60.2 8.7 0.0003 23.3 3.1 34 71-104 4-41 (131)
116 2rb4_A ATP-dependent RNA helic 59.8 8.2 0.00028 24.2 3.1 34 69-102 33-68 (175)
117 3jvi_A Protein tyrosine phosph 59.7 5.8 0.0002 25.1 2.3 35 71-105 5-48 (161)
118 3n8i_A Low molecular weight ph 59.6 6.2 0.00021 24.9 2.4 36 70-105 5-49 (157)
119 3nbm_A PTS system, lactose-spe 59.1 11 0.00037 22.3 3.3 26 68-93 4-29 (108)
120 1t5i_A C_terminal domain of A 58.8 16 0.00054 22.9 4.3 34 69-102 30-65 (172)
121 2c46_A MRNA capping enzyme; ph 58.3 15 0.0005 24.8 4.3 22 8-29 67-92 (241)
122 1fuk_A Eukaryotic initiation f 57.7 19 0.00064 22.2 4.5 34 69-102 29-64 (165)
123 1e2b_A Enzyme IIB-cellobiose; 57.6 8.7 0.0003 22.5 2.7 23 71-93 4-26 (106)
124 3rof_A Low molecular weight pr 57.0 8.3 0.00028 24.4 2.7 36 71-106 7-50 (158)
125 2l17_A Synarsc, arsenate reduc 56.8 9 0.00031 23.3 2.8 33 71-103 5-41 (134)
126 4etm_A LMPTP, low molecular we 56.8 7.8 0.00027 24.9 2.6 35 71-105 19-62 (173)
127 4egs_A Ribose 5-phosphate isom 55.9 9.3 0.00032 24.6 2.8 36 70-105 34-76 (180)
128 1xxa_A ARGR, arginine represso 53.4 18 0.00061 20.0 3.4 26 68-93 48-73 (78)
129 1y1l_A Arsenate reductase (ARS 53.3 17 0.0006 21.7 3.6 33 72-104 1-36 (124)
130 1yn9_A BVP, polynucleotide 5'- 53.2 17 0.00057 22.6 3.7 20 69-88 112-132 (169)
131 2zfz_A Arginine repressor; DNA 52.9 17 0.00058 20.0 3.3 25 68-92 53-77 (79)
132 3czc_A RMPB; alpha/beta sandwi 50.3 13 0.00043 21.8 2.6 37 70-106 18-62 (110)
133 1tvm_A PTS system, galactitol- 49.1 17 0.0006 21.3 3.1 25 69-93 20-45 (113)
134 2p6n_A ATP-dependent RNA helic 49.0 28 0.00095 22.2 4.3 34 69-102 53-88 (191)
135 1b4b_A Arginine repressor; cor 48.3 16 0.00053 19.8 2.6 25 68-92 45-69 (71)
136 3t38_A Arsenate reductase; low 47.3 22 0.00075 23.7 3.6 34 69-102 80-117 (213)
137 1o1x_A Ribose-5-phosphate isom 46.7 53 0.0018 20.8 5.9 52 12-83 29-83 (155)
138 1vkr_A Mannitol-specific PTS s 46.5 21 0.00072 21.5 3.2 25 69-93 12-37 (125)
139 3eaq_A Heat resistant RNA depe 44.9 16 0.00056 23.7 2.8 34 69-102 30-65 (212)
140 4em8_A Ribose 5-phosphate isom 44.8 56 0.0019 20.5 5.5 52 12-82 24-76 (148)
141 3nme_A Ptpkis1 protein, SEX4 g 43.6 22 0.00074 24.7 3.3 25 69-93 105-131 (294)
142 2l2q_A PTS system, cellobiose- 43.0 15 0.00051 21.4 2.1 23 71-93 5-27 (109)
143 1jzt_A Hypothetical 27.5 kDa p 42.9 63 0.0022 21.8 5.5 43 71-113 59-117 (246)
144 2i4i_A ATP-dependent RNA helic 42.9 40 0.0014 23.7 4.7 36 68-103 274-311 (417)
145 2p5m_A Arginine repressor; alp 42.8 19 0.00066 20.0 2.5 25 68-92 57-81 (83)
146 3ph3_A Ribose-5-phosphate isom 41.7 68 0.0023 20.6 5.8 51 12-82 37-90 (169)
147 2v1x_A ATP-dependent DNA helic 41.3 35 0.0012 26.1 4.4 34 69-102 266-301 (591)
148 3s5p_A Ribose 5-phosphate isom 40.6 70 0.0024 20.5 6.2 54 12-85 38-94 (166)
149 1oyw_A RECQ helicase, ATP-depe 39.6 40 0.0014 25.3 4.4 35 69-103 235-271 (523)
150 3he8_A Ribose-5-phosphate isom 39.2 70 0.0024 20.0 6.0 53 12-84 17-72 (149)
151 1z5z_A Helicase of the SNF2/RA 37.6 35 0.0012 23.2 3.6 35 68-102 110-147 (271)
152 3dfz_A SIRC, precorrin-2 dehyd 37.1 30 0.001 23.1 3.1 49 32-100 12-62 (223)
153 2d7d_A Uvrabc system protein B 36.7 44 0.0015 26.0 4.4 44 59-102 434-479 (661)
154 2b49_A Protein tyrosine phosph 35.7 53 0.0018 22.6 4.3 20 68-87 207-227 (287)
155 2vvr_A Ribose-5-phosphate isom 35.2 83 0.0028 19.7 6.0 52 11-82 17-71 (149)
156 1c4o_A DNA nucleotide excision 35.0 37 0.0013 26.4 3.7 44 59-102 428-473 (664)
157 3d3k_A Enhancer of mRNA-decapp 33.7 45 0.0015 22.7 3.6 27 71-97 86-117 (259)
158 3d3j_A Enhancer of mRNA-decapp 33.7 44 0.0015 23.4 3.6 28 71-98 133-165 (306)
159 3sqn_A Conserved domain protei 33.2 61 0.0021 24.2 4.5 26 68-93 396-422 (485)
160 3gxh_A Putative phosphatase (D 33.0 85 0.0029 19.2 7.0 16 70-85 97-112 (157)
161 3gh1_A Predicted nucleotide-bi 32.0 52 0.0018 24.7 3.8 34 69-102 145-185 (462)
162 2yjt_D ATP-dependent RNA helic 38.0 9.8 0.00034 23.7 0.0 35 69-103 29-65 (170)
163 3pey_A ATP-dependent RNA helic 31.6 76 0.0026 21.9 4.7 34 69-102 242-277 (395)
164 1wp9_A ATP-dependent RNA helic 31.3 70 0.0024 22.6 4.5 33 68-100 359-393 (494)
165 2vvp_A Ribose-5-phosphate isom 31.2 1E+02 0.0035 19.6 6.1 53 12-83 20-75 (162)
166 1hv8_A Putative ATP-dependent 31.2 77 0.0026 21.6 4.6 35 68-102 236-272 (367)
167 4fak_A Ribosomal RNA large sub 31.0 77 0.0026 20.1 4.1 41 63-103 67-115 (163)
168 2o8n_A APOA-I binding protein; 30.4 53 0.0018 22.6 3.5 43 71-113 80-137 (265)
169 3kwp_A Predicted methyltransfe 30.4 1.3E+02 0.0043 20.9 5.5 104 4-113 27-141 (296)
170 3fht_A ATP-dependent RNA helic 30.2 44 0.0015 23.4 3.3 34 69-102 265-300 (412)
171 3k7p_A Ribose 5-phosphate isom 30.0 1.1E+02 0.0039 19.7 5.8 56 11-86 38-98 (179)
172 4atq_A 4-aminobutyrate transam 29.9 43 0.0015 24.7 3.2 48 58-105 111-164 (456)
173 3lap_A Arginine repressor; arg 29.7 55 0.0019 21.0 3.3 24 69-92 145-168 (170)
174 1xti_A Probable ATP-dependent 29.7 46 0.0016 23.1 3.2 34 69-102 249-284 (391)
175 1s2m_A Putative ATP-dependent 28.0 44 0.0015 23.4 2.9 34 69-102 257-292 (400)
176 1wch_A Protein tyrosine phosph 26.8 84 0.0029 22.0 4.1 18 68-85 237-255 (315)
177 3i32_A Heat resistant RNA depe 26.6 44 0.0015 23.2 2.7 34 69-102 27-62 (300)
178 2j0s_A ATP-dependent RNA helic 25.8 60 0.002 22.8 3.3 35 69-103 275-311 (410)
179 3rss_A Putative uncharacterize 24.8 94 0.0032 23.4 4.3 45 69-113 51-110 (502)
180 3k5w_A Carbohydrate kinase; 11 24.7 1E+02 0.0035 23.0 4.4 53 61-113 37-103 (475)
181 2ybo_A Methyltransferase; SUMT 24.6 1.7E+02 0.0059 20.0 6.4 108 5-113 37-154 (294)
182 3v4g_A Arginine repressor; vib 24.3 78 0.0027 20.5 3.3 25 69-93 151-175 (180)
183 1z63_A Helicase of the SNF2/RA 23.8 97 0.0033 22.6 4.2 40 63-102 334-376 (500)
184 1srv_A Protein (groel (HSP60 c 23.7 1.4E+02 0.0047 18.7 4.2 52 57-108 40-96 (145)
185 3m4u_A Tyrosine specific prote 23.2 1E+02 0.0034 21.3 4.0 19 68-86 220-239 (306)
186 1b4a_A Arginine repressor; hel 22.5 64 0.0022 20.1 2.6 23 69-91 124-146 (149)
187 2i75_A Tyrosine-protein phosph 22.5 1.3E+02 0.0046 21.0 4.5 19 69-87 236-255 (320)
188 4e3q_A Pyruvate transaminase; 22.3 65 0.0022 23.9 3.0 47 58-104 115-172 (473)
189 1fpr_A Protein-tyrosine phosph 22.1 1.1E+02 0.0038 20.8 4.0 20 68-87 202-222 (284)
190 1s4d_A Uroporphyrin-III C-meth 22.1 1.9E+02 0.0065 19.6 7.7 108 5-113 27-144 (280)
191 3ono_A Ribose/galactose isomer 22.0 1.8E+02 0.0062 19.3 6.3 54 12-83 24-80 (214)
192 3jux_A Protein translocase sub 22.0 85 0.0029 25.4 3.6 35 69-103 473-509 (822)
193 2ojl_A Hypothetical protein; B 21.6 79 0.0027 18.7 2.7 22 71-92 10-31 (108)
194 3eiq_A Eukaryotic initiation f 21.5 55 0.0019 22.9 2.4 35 69-103 279-315 (414)
195 3c5y_A Ribose/galactose isomer 21.2 2E+02 0.0068 19.4 6.0 56 11-83 39-97 (231)
196 4az1_A Tyrosine specific prote 21.1 1.4E+02 0.0048 20.5 4.3 19 69-87 218-237 (302)
197 2ooq_A Receptor-type tyrosine- 21.1 1.3E+02 0.0046 20.5 4.2 17 69-85 211-228 (286)
198 4grz_A Tyrosine-protein phosph 21.0 1.4E+02 0.0047 20.3 4.3 19 68-86 204-223 (288)
199 3hh1_A Tetrapyrrole methylase 20.8 1.3E+02 0.0046 17.3 5.4 90 5-100 18-116 (117)
200 3dex_A SAV_2001; alpha-beta pr 20.7 85 0.0029 18.5 2.7 21 73-93 16-36 (107)
201 3i5x_A ATP-dependent RNA helic 20.7 1.4E+02 0.0047 22.1 4.5 35 68-102 337-376 (563)
202 3mwy_W Chromo domain-containin 20.1 1.4E+02 0.0049 23.6 4.7 40 64-103 566-607 (800)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.96 E-value=1.5e-29 Score=154.94 Aligned_cols=98 Identities=30% Similarity=0.425 Sum_probs=85.4
Q ss_pred CceeCHHHHHHhh--hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 5 VASVGVDTAKDLL--SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 5 ~~~i~~~~l~~~~--~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
++.|+++|+++.+ +++++|||||++.||..||||||+|||++.+. ..+.. ++++++||+||.+|.|
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-----------~~~~~-l~~~~~ivv~C~~G~r 68 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIP-----------DNLNS-FNKNEIYYIVCAGGVR 68 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGG-----------GCGGG-CCTTSEEEEECSSSSH
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchh-----------hhhhh-hcCCCeEEEECCCCHH
Confidence 4689999999988 56789999999999999999999999997654 22222 4889999999999999
Q ss_pred HHHHHHHHHhc--CcceecccHHhHHhCCCCCCC
Q 041947 83 ALRACVDLRNA--HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 83 s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~ 114 (126)
|..++..|.+. +++.+.||+.+|.++|+|+++
T Consensus 69 S~~aa~~L~~~G~~~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 69 SAKVVEYLEANGIDAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHHTTTCEEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHHcCCCEEEecChHHHHHHCCCccee
Confidence 99999999988 666799999999999999875
No 2
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.95 E-value=1.6e-28 Score=155.84 Aligned_cols=112 Identities=48% Similarity=0.787 Sum_probs=97.0
Q ss_pred CCCceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 3 GDVASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
.....|+++++.++++++.+|||+|++.||..||||||+|||+..+...+.+.+.++...+...++++++|||||.+|.+
T Consensus 15 ~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~r 94 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGR 94 (129)
T ss_dssp CCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCSH
T ss_pred CCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCcH
Confidence 46778999999998866789999999999999999999999997665555555567777666667889999999999999
Q ss_pred HHHHHHHHHhc---CcceecccHHhHHhCCCCCCC
Q 041947 83 ALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 83 s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~ 114 (126)
|..++..|.+. +|++|.||+.+|..+|+|+++
T Consensus 95 s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (129)
T 1tq1_A 95 SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129 (129)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred HHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence 99999999888 799999999999999999763
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.95 E-value=4.6e-28 Score=148.10 Aligned_cols=98 Identities=30% Similarity=0.425 Sum_probs=85.9
Q ss_pred CceeCHHHHHHhh--hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 5 VASVGVDTAKDLL--SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 5 ~~~i~~~~l~~~~--~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
++.|+++++.+++ +++.+|||+|++.||..||||||+|+|+..+. ..+.. ++++++||+||.+|.+
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-----------~~~~~-l~~~~~iv~yC~~g~r 68 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIP-----------DNLNS-FNKNEIYYIVCAGGVR 68 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGG-----------GCGGG-CCTTSEEEEECSSSSH
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHH-----------HHHHh-CCCCCeEEEECCCChH
Confidence 3679999999988 56799999999999999999999999997553 22222 4789999999999999
Q ss_pred HHHHHHHHHhc--CcceecccHHhHHhCCCCCCC
Q 041947 83 ALRACVDLRNA--HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 83 s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~ 114 (126)
|..++..|... +|++|.||+.+|.++|+|+++
T Consensus 69 s~~a~~~L~~~G~~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 69 SAKVVEYLEANGIDAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHHTTTCEEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHHCCCCeEEeCCCHHHHHHCCCcCCC
Confidence 99999999888 899999999999999999875
No 4
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.95 E-value=2.1e-27 Score=146.46 Aligned_cols=102 Identities=21% Similarity=0.343 Sum_probs=87.4
Q ss_pred CCceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchH
Q 041947 4 DVASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRA 83 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s 83 (126)
.+..|+++++.++++. .+|||+|++.||..||||||+|+|+. ++...+.. ++++++||+||.+|.+|
T Consensus 2 ~~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA~~ip~~-----------~l~~~~~~-l~~~~~ivvyC~~G~rs 68 (108)
T 3gk5_A 2 YYRSINAADLYENIKA-YTVLDVREPFELIFGSIANSINIPIS-----------ELREKWKI-LERDKKYAVICAHGNRS 68 (108)
T ss_dssp -CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTCEECCHH-----------HHHHHGGG-SCTTSCEEEECSSSHHH
T ss_pred cccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCCEEcCHH-----------HHHHHHHh-CCCCCeEEEEcCCCcHH
Confidence 3678999999999965 99999999999999999999999996 33344444 48899999999999999
Q ss_pred HHHHHHHHhc--CcceecccHHhHHhCCCCCCCCccc
Q 041947 84 LRACVDLRNA--HVTKLEGGYSAWVDEGVAGDKPLEE 118 (126)
Q Consensus 84 ~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~~~~~ 118 (126)
..++..|... +|++|.||+.+|.++++|+++.+..
T Consensus 69 ~~aa~~L~~~G~~v~~l~GG~~~W~~~~~~~~~~~~~ 105 (108)
T 3gk5_A 69 AAAVEFLSQLGLNIVDVEGGIQSWIEEGYPVVLEHHH 105 (108)
T ss_dssp HHHHHHHHTTTCCEEEETTHHHHHHHTTCCCBCC---
T ss_pred HHHHHHHHHcCCCEEEEcCcHHHHHHcCCCCCCCCCC
Confidence 9999999888 8999999999999999999887443
No 5
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.95 E-value=6.5e-28 Score=146.76 Aligned_cols=96 Identities=24% Similarity=0.447 Sum_probs=84.2
Q ss_pred CceeCHHHHHHhh--hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 5 VASVGVDTAKDLL--SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 5 ~~~i~~~~l~~~~--~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
++.|+++++.+++ +++.+|||+|++.||..||||||+|+|++.+.. .+. .++++++||+||.+|.+
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~-----------~~~-~l~~~~~ivvyC~~g~r 68 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPD-----------NLN-YFNDNETYYIICKAGGR 68 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGG-----------CGG-GSCTTSEEEEECSSSHH
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHH-----------HHH-hCCCCCcEEEEcCCCch
Confidence 3679999999988 567999999999999999999999999976542 222 24789999999999999
Q ss_pred HHHHHHHHHhc--CcceecccHHhHHhCCCCC
Q 041947 83 ALRACVDLRNA--HVTKLEGGYSAWVDEGVAG 112 (126)
Q Consensus 83 s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~ 112 (126)
|..++..|... +|++|.||+.+|.++|+|+
T Consensus 69 s~~a~~~L~~~G~~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 69 SAQVVQYLEQNGVNAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHHTTTCEEEEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHHHCCCCEEEecccHHHHHHcCCCC
Confidence 99999999888 8999999999999999985
No 6
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.6e-27 Score=150.66 Aligned_cols=112 Identities=21% Similarity=0.335 Sum_probs=93.9
Q ss_pred CCCceeCHHHHHHhhh---CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhh-cCCCCeEEEEeC
Q 041947 3 GDVASVGVDTAKDLLS---SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASV-CSKEDHIIVVCN 78 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~---~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ivvyc~ 78 (126)
..+..|+++++.+++. ++.+|||+|++.||..||||||+|||+..+........++|...+... ++++++||+||.
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~ 99 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCA 99 (139)
T ss_dssp CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECS
T ss_pred CCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECC
Confidence 3677899999999983 578999999999999999999999999877543333334555555433 578899999999
Q ss_pred CCchHHHHHHHHHhc---CcceecccHHhHHhCCCCCCC
Q 041947 79 SGGRALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 79 ~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~ 114 (126)
+|.+|..++..|..+ +|++|.||+.+|.++|+|+.+
T Consensus 100 ~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 100 SGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 999999999999988 799999999999999998764
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.94 E-value=6.4e-27 Score=143.81 Aligned_cols=95 Identities=28% Similarity=0.456 Sum_probs=77.0
Q ss_pred HHHHhh---hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchHHHHHH
Q 041947 12 TAKDLL---SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRALRACV 88 (126)
Q Consensus 12 ~l~~~~---~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~ 88 (126)
+|++++ .++++|||+|++.||..||||||+|||+. ++...+...++++++|||||.+|.+|..++.
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~ 70 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQAVN 70 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHHHH
Confidence 566666 34689999999999999999999999996 3445554556889999999999999999999
Q ss_pred HHHhc---CcceecccHHhHHhCCCCCCCCcc
Q 041947 89 DLRNA---HVTKLEGGYSAWVDEGVAGDKPLE 117 (126)
Q Consensus 89 ~l~~~---~v~~l~gG~~~w~~~g~~~~~~~~ 117 (126)
.|... +|++|.||+.+|.++|+|+++.+.
T Consensus 71 ~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 71 LLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp HHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred HHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 99888 799999999999999999887743
No 8
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.94 E-value=1.6e-26 Score=142.36 Aligned_cols=98 Identities=18% Similarity=0.345 Sum_probs=86.3
Q ss_pred CCceeCHHHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 4 DVASVGVDTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 4 ~~~~i~~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
.+..|+++++.+++ +++.+|||+|++.||..||||||+|||+. ++..++.. ++++++||+||.+|.+
T Consensus 3 ~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~-----------~l~~~~~~-l~~~~~ivvyc~~g~r 70 (108)
T 1gmx_A 3 QFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTND-----------TLGAFMRD-NDFDTPVMVMCYHGNS 70 (108)
T ss_dssp SCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHH-----------HHHHHHHH-SCTTSCEEEECSSSSH
T ss_pred cccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHH-----------HHHHHHHh-cCCCCCEEEEcCCCch
Confidence 46789999999998 55799999999999999999999999996 34455555 5889999999999999
Q ss_pred HHHHHHHHHhc---CcceecccHHhHHhCCCCCCC
Q 041947 83 ALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 83 s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~ 114 (126)
|..++..|... +|++|.||+.+|.++ +|++.
T Consensus 71 s~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~ 104 (108)
T 1gmx_A 71 SKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV 104 (108)
T ss_dssp HHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred HHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccc
Confidence 99999999888 799999999999998 88764
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.93 E-value=2e-26 Score=148.28 Aligned_cols=98 Identities=28% Similarity=0.426 Sum_probs=86.2
Q ss_pred eeCHHHHHHhh-h--CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchH
Q 041947 7 SVGVDTAKDLL-S--SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRA 83 (126)
Q Consensus 7 ~i~~~~l~~~~-~--~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s 83 (126)
.|+++++.+++ . ++++|||+|++.+|..||||||+|||+. ++..++...++++++|||||.+|.+|
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~rs 69 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQT 69 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHHH
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChHH
Confidence 38999999999 2 3589999999999999999999999996 44455555678899999999999999
Q ss_pred HHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 84 LRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 84 ~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
..+++.|... +|++|.||+.+|.++|+|++..
T Consensus 70 ~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 104 (141)
T 3ilm_A 70 SQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGI 104 (141)
T ss_dssp HHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccC
Confidence 9999998888 7999999999999999999865
No 10
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.93 E-value=1.7e-25 Score=143.21 Aligned_cols=108 Identities=19% Similarity=0.333 Sum_probs=85.6
Q ss_pred CCceeCHHHHHHhhh---CCcEEEecCChhhhcc-cCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCC
Q 041947 4 DVASVGVDTAKDLLS---SGHRFLDVRTTEEFNE-SHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNS 79 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~---~~~~iiDvR~~~e~~~-ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~ 79 (126)
.+..|+++++.+++. ++.+|||+|++.||.. ||||||+|||+..+.......... ....++++++|||||.+
T Consensus 20 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~----~~~~~~~~~~ivvyC~~ 95 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPY----AKPIFQEDKKFVFYCAG 95 (139)
T ss_dssp TSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTT----CCGGGGSSSEEEEECSS
T ss_pred hcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchh----hhccCCCCCeEEEECCC
Confidence 467899999999984 4689999999999999 999999999997553210000000 01124788999999999
Q ss_pred CchHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 80 GGRALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 80 g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
|.+|..+++.|... +|++|+||+.+|.++|+|++..
T Consensus 96 G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 134 (139)
T 2hhg_A 96 GLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAW 134 (139)
T ss_dssp SHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC--
T ss_pred ChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecC
Confidence 99999998888888 7999999999999999999876
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.92 E-value=1.8e-25 Score=143.11 Aligned_cols=102 Identities=24% Similarity=0.376 Sum_probs=87.6
Q ss_pred CCceeCHHHHHHhhh--CCcEEEecCChhhhcc-cC--CCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeC
Q 041947 4 DVASVGVDTAKDLLS--SGHRFLDVRTTEEFNE-SH--VHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCN 78 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~--~~~~iiDvR~~~e~~~-gh--I~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~ 78 (126)
.+..|+++++.+++. ++.+|||||++.||.. || ||||+|||+..+.. ...+. .++++++|||||.
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~---------~~~~~-~l~~~~~ivvyC~ 90 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEP---------LLAKS-GLDPEKPVVVFCK 90 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHH---------HHHHH-CCCTTSCEEEECC
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhh---------HHhhc-cCCCCCeEEEEcC
Confidence 467899999999983 5699999999999999 99 99999999975531 11222 3578999999999
Q ss_pred CCchHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 79 SGGRALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 79 ~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+|.+|..++..|... +|++|.||+.+|.++|+|+++.
T Consensus 91 ~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 130 (137)
T 1qxn_A 91 TAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDR 130 (137)
T ss_dssp SSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECC
T ss_pred CCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccc
Confidence 999999999999888 7999999999999999998866
No 12
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.92 E-value=1.6e-25 Score=144.52 Aligned_cols=101 Identities=25% Similarity=0.351 Sum_probs=86.0
Q ss_pred ceeCHHHHHHhh-h--CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCC--
Q 041947 6 ASVGVDTAKDLL-S--SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSG-- 80 (126)
Q Consensus 6 ~~i~~~~l~~~~-~--~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g-- 80 (126)
..|+++++.+.+ . ++++|||+|++.||..||||||+|||+..+... . ...++++++|||||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~----------~-~~~l~~~~~ivvyC~~g~~ 84 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINED----------T-TKRLSKEKVIITYCWGPAC 84 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTT----------T-TTTCCTTSEEEEECSCTTC
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHH----------H-HhhCCCCCeEEEEECCCCc
Confidence 368999999999 3 368999999999999999999999999866421 1 12357899999999998
Q ss_pred chHHHHHHHHHhc--CcceecccHHhHHhCCCCCCCCcc
Q 041947 81 GRALRACVDLRNA--HVTKLEGGYSAWVDEGVAGDKPLE 117 (126)
Q Consensus 81 ~~s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~~~~ 117 (126)
.+|..+++.|... +|++|.||+.+|.++|+|++....
T Consensus 85 ~rs~~aa~~L~~~G~~v~~l~GG~~~W~~~g~pv~~~~~ 123 (144)
T 3nhv_A 85 NGATKAAAKFAQLGFRVKELIGGIEYWRKENGEVEGTLG 123 (144)
T ss_dssp CHHHHHHHHHHHTTCEEEEEESHHHHHHHTTCCCBSSSG
T ss_pred cHHHHHHHHHHHCCCeEEEeCCcHHHHHHCCCCccCCCC
Confidence 6999999988888 899999999999999999998733
No 13
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.92 E-value=3.4e-25 Score=139.58 Aligned_cols=98 Identities=18% Similarity=0.269 Sum_probs=83.2
Q ss_pred ceeCHHHHHHhh-h--CCcEEEecCChhhh-cccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCc
Q 041947 6 ASVGVDTAKDLL-S--SGHRFLDVRTTEEF-NESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGG 81 (126)
Q Consensus 6 ~~i~~~~l~~~~-~--~~~~iiDvR~~~e~-~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~ 81 (126)
..|+++++.+++ + ++.+|||+|++.|| ..||||||+|||+. ++...+.. ++++++||+||.+|.
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~-----------~l~~~~~~-l~~~~~ivvyC~~g~ 82 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAK-----------DLATRIGE-LDPAKTYVVYDWTGG 82 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHH-----------HHHHHGGG-SCTTSEEEEECSSSS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHH-----------HHHHHHhc-CCCCCeEEEEeCCCC
Confidence 469999999999 3 34899999999998 99999999999996 34444443 588999999999999
Q ss_pred h--HHHHHHHHHhc--CcceecccHHhHHhCCCCCCCC
Q 041947 82 R--ALRACVDLRNA--HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 82 ~--s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+ |..++..|... +|++|.||+.+|..+|+|..+.
T Consensus 83 r~~s~~a~~~L~~~G~~v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 83 TTLGKTALLVLLSAGFEAYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp CSHHHHHHHHHHHHTCEEEEETTHHHHHHHTTCCEEC-
T ss_pred chHHHHHHHHHHHcCCeEEEeCCcHHHHHHcCCCCCcc
Confidence 8 78888888877 8999999999999999987654
No 14
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.92 E-value=6.1e-26 Score=136.55 Aligned_cols=92 Identities=23% Similarity=0.271 Sum_probs=73.5
Q ss_pred CceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchHH
Q 041947 5 VASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRAL 84 (126)
Q Consensus 5 ~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s~ 84 (126)
+..|+++++.++++++.+|||+|++.||..||||||+|+|+..+.. .+. .+++ ++||+||.+|.+|.
T Consensus 1 ~~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~-----------~~~-~l~~-~~ivvyC~~g~rs~ 67 (94)
T 1wv9_A 1 MRKVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAEWVPLEKIQK-----------GEH-GLPR-RPLLLVCEKGLLSQ 67 (94)
T ss_dssp -CEECGGGHHHHHHTTCEEEECCCC--CCSCCSSCCEECCHHHHTT-----------TCC-CCCS-SCEEEECSSSHHHH
T ss_pred CCcCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCCEECCHHHHHH-----------HHH-hCCC-CCEEEEcCCCChHH
Confidence 3579999999988668999999999999999999999999975532 111 2467 99999999999999
Q ss_pred HHHHHHHhc--CcceecccHHhHHhCC
Q 041947 85 RACVDLRNA--HVTKLEGGYSAWVDEG 109 (126)
Q Consensus 85 ~~~~~l~~~--~v~~l~gG~~~w~~~g 109 (126)
.++..|... +|++|.||+.+|.++|
T Consensus 68 ~a~~~L~~~G~~v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 68 VAALYLEAEGYEAMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHHHTCCEEEETTGGGCC----
T ss_pred HHHHHHHHcCCcEEEEcccHHHHHhCc
Confidence 999999888 7889999999998765
No 15
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.92 E-value=2.3e-25 Score=144.87 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=87.6
Q ss_pred CCCceeCHHHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeC-CC
Q 041947 3 GDVASVGVDTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCN-SG 80 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~-~g 80 (126)
..+..|+++++.+++ +++.+|||+|++.||..||||||+|||+..+.. .+ ..+...++++++|||||. +|
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~-------~~-~~l~~~~~~~~~iVvyC~~~G 96 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDD-------KI-SHLVQNVKDKDTLVFHSALSQ 96 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSST-------TH-HHHHHTCCSCCEEEESSSCCS
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHHH-------HH-HHHHHhcCCCCEEEEEcCCCC
Confidence 467789999999888 578999999999999999999999999976542 22 233333478899999999 99
Q ss_pred chHHHHHHHHHh--------c---CcceecccHHhHHhCCCCCCCCc
Q 041947 81 GRALRACVDLRN--------A---HVTKLEGGYSAWVDEGVAGDKPL 116 (126)
Q Consensus 81 ~~s~~~~~~l~~--------~---~v~~l~gG~~~w~~~g~~~~~~~ 116 (126)
.++..++..|.+ . +|++|+||+.+|.++|+|+++.+
T Consensus 97 ~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 143 (152)
T 1t3k_A 97 VRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA 143 (152)
T ss_dssp SSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred cchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCC
Confidence 999888887743 3 79999999999999999998764
No 16
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.91 E-value=3e-25 Score=137.15 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=80.6
Q ss_pred CceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHh-hcCCCCeEEEEeCCCchH
Q 041947 5 VASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVAS-VCSKEDHIIVVCNSGGRA 83 (126)
Q Consensus 5 ~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ivvyc~~g~~s 83 (126)
...|+++++. .++.+|||+|++.||..||||||+|+|+..+. ..+.. .++++++||+||.+|.+|
T Consensus 4 ~~~is~~el~---~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~-----------~~~~~~~~~~~~~ivvyC~~G~rs 69 (110)
T 2k0z_A 4 DYAISLEEVN---FNDFIVVDVRELDEYEELHLPNATLISVNDQE-----------KLADFLSQHKDKKVLLHCRAGRRA 69 (110)
T ss_dssp TTEEETTTCC---GGGSEEEEEECHHHHHHSBCTTEEEEETTCHH-----------HHHHHHHSCSSSCEEEECSSSHHH
T ss_pred eeeeCHHHhc---cCCeEEEECCCHHHHhcCcCCCCEEcCHHHHH-----------HHHHhcccCCCCEEEEEeCCCchH
Confidence 4567776652 46789999999999999999999999997443 33332 358899999999999999
Q ss_pred HHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 84 LRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 84 ~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
..++..|... + ++|.||+.+|.++|+|++..
T Consensus 70 ~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~ 103 (110)
T 2k0z_A 70 LDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYD 103 (110)
T ss_dssp HHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCC
T ss_pred HHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecC
Confidence 9999999888 6 99999999999999998866
No 17
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.91 E-value=6.5e-24 Score=149.06 Aligned_cols=111 Identities=20% Similarity=0.232 Sum_probs=94.9
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCChhhhcccCCCCcccccccccccc-----C-CCCChHHHHHHHhh-cCCCCeEEEEe
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQE-----G-RVKNPEFLTQVASV-CSKEDHIIVVC 77 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~-----~-~~~~~~~~~~~~~~-~~~~~~ivvyc 77 (126)
..|+++++.+++ +++.+|||+|++.+|..||||||+|+|+..+... . ....+.|..++... ++++++|||||
T Consensus 9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc 88 (271)
T 1e0c_A 9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYD 88 (271)
T ss_dssp SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEc
Confidence 489999999999 5688999999999999999999999999876543 1 22335677788776 78999999999
Q ss_pred CCCc-hHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCCc
Q 041947 78 NSGG-RALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKPL 116 (126)
Q Consensus 78 ~~g~-~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~~ 116 (126)
.+|. ++..+++.|... +|++|+||+.+|..+|+|++...
T Consensus 89 ~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~ 131 (271)
T 1e0c_A 89 DEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSREL 131 (271)
T ss_dssp SSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCC
T ss_pred CCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCC
Confidence 9988 888888888877 79999999999999999998763
No 18
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=135.73 Aligned_cols=102 Identities=27% Similarity=0.377 Sum_probs=79.7
Q ss_pred ceeCHHHHHHhh-h-CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHH----hh-----cCCCCeEE
Q 041947 6 ASVGVDTAKDLL-S-SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVA----SV-----CSKEDHII 74 (126)
Q Consensus 6 ~~i~~~~l~~~~-~-~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~iv 74 (126)
..|+++++.+++ + ++.+|||+|++.||..||||||+|||+..+... ...+...+. .. ++++++||
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~iv 76 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPIY 76 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEEE
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeEE
Confidence 468999999999 4 369999999999999999999999999866532 122222221 11 23455999
Q ss_pred EEeCCCchHHHHHHHHHhc---------CcceecccHHhHHhCCCC
Q 041947 75 VVCNSGGRALRACVDLRNA---------HVTKLEGGYSAWVDEGVA 111 (126)
Q Consensus 75 vyc~~g~~s~~~~~~l~~~---------~v~~l~gG~~~w~~~g~~ 111 (126)
+||.+|.+|..++.+|.+. +|++|.||+.+|.++..|
T Consensus 77 v~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 77 VICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp EECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred EEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 9999999999999998865 789999999999987655
No 19
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=4.6e-24 Score=138.06 Aligned_cols=108 Identities=20% Similarity=0.346 Sum_probs=85.1
Q ss_pred CceeCHHHHHHhh-h-CCcEEEecCChhhhcc-cCC------CCccccccccccccCCCCChHHHHHHHhh-----cCCC
Q 041947 5 VASVGVDTAKDLL-S-SGHRFLDVRTTEEFNE-SHV------HGALNVPYLFITQEGRVKNPEFLTQVASV-----CSKE 70 (126)
Q Consensus 5 ~~~i~~~~l~~~~-~-~~~~iiDvR~~~e~~~-ghI------~ga~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 70 (126)
+..|+++++.+++ + ++.+|||||++.||.. ||| |||+|||+.. .. .. ..+.+...+... ++++
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~-~~-~~~~~~~~l~~~l~~~~~~~~ 80 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SD-GT-HNDNFLAELRDRIPADADQHE 80 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TT-SC-BCTTHHHHHHHHCC-------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-cc-cc-cCHHHHHHHHHHHhhccCCCC
Confidence 4579999999998 3 6899999999999997 999 9999999976 11 11 123455555443 3788
Q ss_pred CeEEEEeCCCchHHHHHHHHHhc---CcceecccH------------HhHHhCCCCCCCC
Q 041947 71 DHIIVVCNSGGRALRACVDLRNA---HVTKLEGGY------------SAWVDEGVAGDKP 115 (126)
Q Consensus 71 ~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~------------~~w~~~g~~~~~~ 115 (126)
++|||||.+|.+|..++..|... +|++|.||+ .+|+++|+|++..
T Consensus 81 ~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~ 140 (148)
T 2fsx_A 81 RPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQG 140 (148)
T ss_dssp CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC
T ss_pred CEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCcc
Confidence 99999999999999999999888 799999999 6888888888754
No 20
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=1.2e-23 Score=148.30 Aligned_cols=112 Identities=21% Similarity=0.305 Sum_probs=94.3
Q ss_pred CceeCHHHHHHhh-hCCcEEEecC----------ChhhhcccCCCCccccccccccccC-----C-CCChHHHHHHHhh-
Q 041947 5 VASVGVDTAKDLL-SSGHRFLDVR----------TTEEFNESHVHGALNVPYLFITQEG-----R-VKNPEFLTQVASV- 66 (126)
Q Consensus 5 ~~~i~~~~l~~~~-~~~~~iiDvR----------~~~e~~~ghI~ga~~i~~~~~~~~~-----~-~~~~~~~~~~~~~- 66 (126)
-..|+++++.+++ +++.+|||+| ++.+|..||||||+|+|+..+.... . ...+.|...+...
T Consensus 3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 82 (280)
T 1urh_A 3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG 82 (280)
T ss_dssp CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 3579999999999 5789999999 7789999999999999998765421 2 2346677888776
Q ss_pred cCCCCeEEEEeCCCch-HHHHHHHHHhc---CcceecccHHhHHhCCCCCCCCc
Q 041947 67 CSKEDHIIVVCNSGGR-ALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKPL 116 (126)
Q Consensus 67 ~~~~~~ivvyc~~g~~-s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~~ 116 (126)
++++++|||||.+|.+ +..+++.|... +|++|+||+.+|.++|+|+++..
T Consensus 83 i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 136 (280)
T 1urh_A 83 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGA 136 (280)
T ss_dssp CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSC
T ss_pred CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCC
Confidence 7889999999999988 77777777777 89999999999999999998763
No 21
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.90 E-value=3.4e-23 Score=145.42 Aligned_cols=108 Identities=14% Similarity=0.282 Sum_probs=91.9
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCChhhhc--------ccCCCCcccccccccccc--CCCCChHHHHHHHhh-cCCCCeE
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRTTEEFN--------ESHVHGALNVPYLFITQE--GRVKNPEFLTQVASV-CSKEDHI 73 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~~~e~~--------~ghI~ga~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~i 73 (126)
..|+++++.+.+ +++.+|||+|++.||. .||||||+|+|+..+.+. .....+++.+.+... ++++++|
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i 226 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEI 226 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSEE
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCCE
Confidence 467999999988 6679999999999999 999999999999877543 222336677777654 6889999
Q ss_pred EEEeCCCchHHHHHHHHHhc---CcceecccHHhHHhC-CCCCC
Q 041947 74 IVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVDE-GVAGD 113 (126)
Q Consensus 74 vvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~-g~~~~ 113 (126)
|+||.+|.+|..++..|..+ +|++|.||+.+|.++ ++|++
T Consensus 227 vvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~ 270 (271)
T 1e0c_A 227 VTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270 (271)
T ss_dssp EEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred EEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCc
Confidence 99999999999999998887 799999999999998 99876
No 22
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.90 E-value=1.2e-23 Score=133.32 Aligned_cols=104 Identities=27% Similarity=0.430 Sum_probs=79.2
Q ss_pred CCCceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCC----------------------CCChHHH
Q 041947 3 GDVASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGR----------------------VKNPEFL 60 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~----------------------~~~~~~~ 60 (126)
..+..|+++++.+ .++.+|||+|++.||..||||||+|||+..+..... ....++.
T Consensus 2 ~~~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (134)
T 3g5j_A 2 NAMSVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIY 79 (134)
T ss_dssp ---CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHH
T ss_pred CCccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHH
Confidence 3577899999877 678999999999999999999999999964321000 0002344
Q ss_pred HHHHhhcCCC-CeEEEEe-CCCchHHHHHHHHHhc--CcceecccHHhHHhCC
Q 041947 61 TQVASVCSKE-DHIIVVC-NSGGRALRACVDLRNA--HVTKLEGGYSAWVDEG 109 (126)
Q Consensus 61 ~~~~~~~~~~-~~ivvyc-~~g~~s~~~~~~l~~~--~v~~l~gG~~~w~~~g 109 (126)
..+... +++ ++||+|| .+|.+|..++..|... +|++|.||+.+|++..
T Consensus 80 ~~~~~~-~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 80 LQAAEL-ALNYDNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEGGYKAYRNFV 131 (134)
T ss_dssp HHHHHH-HTTCSEEEEECSSSSHHHHHHHHHHHHTTCCCEEETTHHHHHHHHH
T ss_pred HHHHHh-ccCCCeEEEEECCCChHHHHHHHHHHHcCCceEEEeCcHHHHHHHh
Confidence 444443 567 9999999 5899999999999888 8999999999998753
No 23
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.89 E-value=3.1e-23 Score=148.93 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=91.8
Q ss_pred CceeCHHHHHHhh-hCCcEEEecCChhh-hcccCCCCccccccccccc---cC-CCCChHHHHHHHhh-cCCCCeEEEEe
Q 041947 5 VASVGVDTAKDLL-SSGHRFLDVRTTEE-FNESHVHGALNVPYLFITQ---EG-RVKNPEFLTQVASV-CSKEDHIIVVC 77 (126)
Q Consensus 5 ~~~i~~~~l~~~~-~~~~~iiDvR~~~e-~~~ghI~ga~~i~~~~~~~---~~-~~~~~~~~~~~~~~-~~~~~~ivvyc 77 (126)
...|+++++.+++ +++++|||+|+..+ |..||||||+|||+..... .. ....++|..++... ++++++|||||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 3469999999999 67899999999887 9999999999999753221 11 22335788888887 78999999999
Q ss_pred CCCc-hHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 78 NSGG-RALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 78 ~~g~-~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
.+|. ++..+++.|... +|++|+||+.+|+++|+|+++.
T Consensus 119 ~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 160 (318)
T 3hzu_A 119 DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLD 160 (318)
T ss_dssp SGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCC
T ss_pred CCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccC
Confidence 9887 788877777776 7999999999999999999875
No 24
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.89 E-value=1.4e-23 Score=133.71 Aligned_cols=112 Identities=15% Similarity=0.222 Sum_probs=90.3
Q ss_pred CCceeCHHHHHHhh--hCCcEEEecCChhhhcc-cCC------CCccccccccccccCCCCChHHHHHHHhhc--CCCCe
Q 041947 4 DVASVGVDTAKDLL--SSGHRFLDVRTTEEFNE-SHV------HGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDH 72 (126)
Q Consensus 4 ~~~~i~~~~l~~~~--~~~~~iiDvR~~~e~~~-ghI------~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 72 (126)
....|+++++.+++ +++.+|||||++.||.. +|+ |||+|||+..+. ...|...+...+ +++++
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~------~~~~~~~l~~~~~~~~~~~ 76 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGED------KPGFLKKLSLKFKDPENTT 76 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGG------HHHHHHHHHTTCSCGGGCE
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeeccccc------ChhHHHHHHHHhCCCCCCE
Confidence 35679999999988 35789999999999986 343 799999986542 234555555443 67899
Q ss_pred EEEEeCCCchHHHHHHHHHhc---CcceecccH---HhHHhCCCCCCCCcccccc
Q 041947 73 IIVVCNSGGRALRACVDLRNA---HVTKLEGGY---SAWVDEGVAGDKPLEELKI 121 (126)
Q Consensus 73 ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~---~~w~~~g~~~~~~~~~~~~ 121 (126)
|||||.+|.||..++..|..+ +|+.+.||+ .+|.++|+|++.+...+++
T Consensus 77 ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~~~~~ 131 (134)
T 1vee_A 77 LYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSGP 131 (134)
T ss_dssp EEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCCCCCC
T ss_pred EEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCCCCCC
Confidence 999999999999999999888 799999999 7899999999887555544
No 25
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=1.7e-22 Score=142.46 Aligned_cols=109 Identities=28% Similarity=0.413 Sum_probs=83.0
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCChhhh-----------cccCCCCccccccccccccCCCCCh-HHHHHHHhh-cCCCC
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRTTEEF-----------NESHVHGALNVPYLFITQEGRVKNP-EFLTQVASV-CSKED 71 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~~~e~-----------~~ghI~ga~~i~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~ 71 (126)
..|+++++.+.+ +++.+|||+|++.|| ..||||||+|||+..+...+.+.+. ++...+... +++++
T Consensus 152 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (280)
T 1urh_A 152 AVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDK 231 (280)
T ss_dssp GBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSS
T ss_pred cEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCC
Confidence 458999999998 678999999999999 6899999999999887654444333 444444433 67899
Q ss_pred eEEEEeCCCchHHHHHHHHHhc---CcceecccHHhHHh-CCCCCCC
Q 041947 72 HIIVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVD-EGVAGDK 114 (126)
Q Consensus 72 ~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~-~g~~~~~ 114 (126)
+||+||.+|.+|..++..|..+ +|++|.||+.+|.. .++|++.
T Consensus 232 ~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 232 PIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp CEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred CEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 9999999999999999999888 79999999999987 5888764
No 26
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.88 E-value=2.8e-22 Score=142.51 Aligned_cols=111 Identities=26% Similarity=0.337 Sum_probs=90.2
Q ss_pred CceeCHHHHHHhh-h----CCcEEEecC--------ChhhhcccCCCCcccccccccccc-----CCCC-ChHHHHHHHh
Q 041947 5 VASVGVDTAKDLL-S----SGHRFLDVR--------TTEEFNESHVHGALNVPYLFITQE-----GRVK-NPEFLTQVAS 65 (126)
Q Consensus 5 ~~~i~~~~l~~~~-~----~~~~iiDvR--------~~~e~~~ghI~ga~~i~~~~~~~~-----~~~~-~~~~~~~~~~ 65 (126)
-..|+++++.+++ + ++.+|||+| ++.+|..||||||+|+|+..+... ..++ .+.|...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 4589999999999 4 578999999 688999999999999999866542 1222 3567777776
Q ss_pred h-cCCCCeEEEEeCC--Cch-HHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 66 V-CSKEDHIIVVCNS--GGR-ALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 66 ~-~~~~~~ivvyc~~--g~~-s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
. ++++++|||||.+ |.+ +..+++.|... +|++|+||+.+|.++|+|++..
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 143 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSE 143 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCS
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccC
Confidence 5 7889999999998 777 55656566665 7999999999999999999876
No 27
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.88 E-value=1.7e-22 Score=142.29 Aligned_cols=111 Identities=22% Similarity=0.296 Sum_probs=89.8
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCC-hhhhcccCCCCcccccccccccc---CC-CCChHHHHHHHhh-cCCCCeEEEEeC
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRT-TEEFNESHVHGALNVPYLFITQE---GR-VKNPEFLTQVASV-CSKEDHIIVVCN 78 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~-~~e~~~ghI~ga~~i~~~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~ivvyc~ 78 (126)
..|+++++.+++ +++.+|||+|+ +.+|..||||||+|||+..+... .. ...+.|..++... ++++++|||||.
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~ 85 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGG 85 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEECS
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 579999999988 56789999998 89999999999999998754321 12 2234677777775 788999999999
Q ss_pred CCc-hHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCCc
Q 041947 79 SGG-RALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKPL 116 (126)
Q Consensus 79 ~g~-~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~~ 116 (126)
+|. ++..+++.|..+ +|++|+||+.+|.++|+|++..+
T Consensus 86 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 127 (277)
T 3aay_A 86 NNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDP 127 (277)
T ss_dssp GGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCC
T ss_pred CCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCC
Confidence 876 566666666666 89999999999999999998763
No 28
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.88 E-value=2.8e-22 Score=143.03 Aligned_cols=107 Identities=19% Similarity=0.311 Sum_probs=90.4
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCChhhh-----------cccCCCCcccccccccccc-CCC-CChHHHHHHHhh-cCCC
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRTTEEF-----------NESHVHGALNVPYLFITQE-GRV-KNPEFLTQVASV-CSKE 70 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~~~e~-----------~~ghI~ga~~i~~~~~~~~-~~~-~~~~~~~~~~~~-~~~~ 70 (126)
..++.+++.+.+ +++.+|||+|++.|| ..||||||+|||+..+... +.+ ..+++.+.+... ++++
T Consensus 175 ~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 254 (302)
T 3olh_A 175 FIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLS 254 (302)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTT
T ss_pred ceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCC
Confidence 468899999988 678999999999999 7899999999999887543 333 345566666654 6889
Q ss_pred CeEEEEeCCCchHHHHHHHHHhc---CcceecccHHhHHhCCCCC
Q 041947 71 DHIIVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVDEGVAG 112 (126)
Q Consensus 71 ~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~ 112 (126)
++||+||.+|.+|..++..|..+ +|++|+||+.+|.++++|.
T Consensus 255 ~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 255 KPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp SCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred CCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 99999999999999988888777 8999999999999998874
No 29
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=9e-23 Score=144.15 Aligned_cols=112 Identities=19% Similarity=0.259 Sum_probs=91.4
Q ss_pred CCceeCHHHHHHhh-hCCcEEEecC-ChhhhcccCCCCccccccccccc---cCCC-CChHHHHHHHhh-cCCCCeEEEE
Q 041947 4 DVASVGVDTAKDLL-SSGHRFLDVR-TTEEFNESHVHGALNVPYLFITQ---EGRV-KNPEFLTQVASV-CSKEDHIIVV 76 (126)
Q Consensus 4 ~~~~i~~~~l~~~~-~~~~~iiDvR-~~~e~~~ghI~ga~~i~~~~~~~---~~~~-~~~~~~~~~~~~-~~~~~~ivvy 76 (126)
+...|+++++.+++ +++.+|||+| ++.+|..||||||+|+|+..... ...+ ..+.|..++... ++++++||||
T Consensus 6 ~~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvy 85 (285)
T 1uar_A 6 PEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLY 85 (285)
T ss_dssp GGGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 34689999999998 5578999999 68999999999999999874222 1122 234677777776 7899999999
Q ss_pred eCCCc-hHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 77 CNSGG-RALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 77 c~~g~-~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
|.+|. ++..+++.|... +|++|+||+.+|..+|+|++..
T Consensus 86 c~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 128 (285)
T 1uar_A 86 GDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTE 128 (285)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCC
T ss_pred CCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCC
Confidence 99888 677777777776 7999999999999999999875
No 30
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.87 E-value=3.1e-22 Score=142.28 Aligned_cols=110 Identities=16% Similarity=0.308 Sum_probs=92.0
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCChhhh------------cccCCCCccccccccccc-cCCCCC-hHHHHHHHhh-cCC
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRTTEEF------------NESHVHGALNVPYLFITQ-EGRVKN-PEFLTQVASV-CSK 69 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~~~e~------------~~ghI~ga~~i~~~~~~~-~~~~~~-~~~~~~~~~~-~~~ 69 (126)
..|+++++.+.+ +++.+|||+|++.|| ..||||||+|||+..+.. .+.+.+ +++...+... +++
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 239 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDL 239 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCT
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCC
Confidence 578999999988 678999999999999 789999999999987754 233333 3455555543 678
Q ss_pred CCeEEEEeCCCchHHHHHHHHHhc---CcceecccHHhHHh-CCCCCCCC
Q 041947 70 EDHIIVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVD-EGVAGDKP 115 (126)
Q Consensus 70 ~~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~-~g~~~~~~ 115 (126)
+++||+||.+|.+|..++..|..+ +|++|.||+.+|.. .++|++..
T Consensus 240 ~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 289 (296)
T 1rhs_A 240 TKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVS 289 (296)
T ss_dssp TSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEB
T ss_pred CCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccC
Confidence 999999999999999999999887 79999999999998 89998765
No 31
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.87 E-value=9.1e-23 Score=134.74 Aligned_cols=115 Identities=16% Similarity=0.233 Sum_probs=83.4
Q ss_pred CCCceeCHHHHHHhh-hC-------CcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhh-cC--CCC
Q 041947 3 GDVASVGVDTAKDLL-SS-------GHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASV-CS--KED 71 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~-~~-------~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~ 71 (126)
..++.|++++|.+++ .+ +++|||||+ .||..||||||+|||+..+..... ..+++...+... ++ ..+
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~-~l~~l~~~~~~~~~~~~~~~ 105 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPE-YLRELKHRLLEKQADGRGAL 105 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHH-HHHHHHHHHHHHHHTSSSCE
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccc-cHHHHHHHHHhhcccccCCC
Confidence 357789999999999 32 489999999 999999999999999986643100 001122211111 11 247
Q ss_pred eEEEEeCCC-chHHHHHHHHHhc---------CcceecccHHhHHhCCCCCCCCcccc
Q 041947 72 HIIVVCNSG-GRALRACVDLRNA---------HVTKLEGGYSAWVDEGVAGDKPLEEL 119 (126)
Q Consensus 72 ~ivvyc~~g-~~s~~~~~~l~~~---------~v~~l~gG~~~w~~~g~~~~~~~~~~ 119 (126)
+|||||.+| .|+..++.+|.+. +|++|.||+.+|.+++.+.+.-++.+
T Consensus 106 ~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~~~~~~ 163 (169)
T 3f4a_A 106 NVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDESVTAGY 163 (169)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTTTEESC
T ss_pred eEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcccccccc
Confidence 899999987 8888888777642 69999999999999988876654443
No 32
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.87 E-value=8e-22 Score=140.68 Aligned_cols=110 Identities=20% Similarity=0.280 Sum_probs=88.7
Q ss_pred ceeCHHHHHHhh-hC----CcEEEecC---------ChhhhcccCCCCccccccccccccC-----C-CCChHHHHHHHh
Q 041947 6 ASVGVDTAKDLL-SS----GHRFLDVR---------TTEEFNESHVHGALNVPYLFITQEG-----R-VKNPEFLTQVAS 65 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~----~~~iiDvR---------~~~e~~~ghI~ga~~i~~~~~~~~~-----~-~~~~~~~~~~~~ 65 (126)
..|+++++.+++ ++ +++|||+| ++.+|..||||||+|||++.+.+.. . ...+.|..++.+
T Consensus 22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 101 (302)
T 3olh_A 22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGR 101 (302)
T ss_dssp CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHH
Confidence 579999999999 43 89999999 7889999999999999997654321 1 233568888888
Q ss_pred h-cCCCCeEEEEeCC--C-chHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 66 V-CSKEDHIIVVCNS--G-GRALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 66 ~-~~~~~~ivvyc~~--g-~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+ ++++++|||||.+ + .+++.+++.|... +|++|+||+.+|..+|+|++..
T Consensus 102 lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 158 (302)
T 3olh_A 102 LGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSG 158 (302)
T ss_dssp TTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCS
T ss_pred cCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccC
Confidence 7 6899999999964 3 3577766667766 7999999999999999999876
No 33
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.87 E-value=4.7e-22 Score=139.33 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=85.0
Q ss_pred CCceeCHHHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhh--cCCCCeEEEEeCCC
Q 041947 4 DVASVGVDTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASV--CSKEDHIIVVCNSG 80 (126)
Q Consensus 4 ~~~~i~~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivvyc~~g 80 (126)
....|+++++.+++ +++++|||+|++.||..||||||+|+|+..+. ++..++... .+++++||+||.+|
T Consensus 120 ~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~--------~~~~~l~~~l~~~kdk~IVvyC~~G 191 (265)
T 4f67_A 120 AGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFR--------EFPDYVQRNLIDKKDKKIAMFCTGG 191 (265)
T ss_dssp TTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGG--------GHHHHHHHHTGGGTTSCEEEECSSS
T ss_pred CCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHH--------hhHHHHHHhhhhCCCCeEEEEeCCC
Confidence 46789999999999 67899999999999999999999999997664 444544433 26789999999999
Q ss_pred chHHHHHHHHHhc---CcceecccHHhHHhCCC
Q 041947 81 GRALRACVDLRNA---HVTKLEGGYSAWVDEGV 110 (126)
Q Consensus 81 ~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~ 110 (126)
.+|..++.+|... +|+.|.||+.+|.++..
T Consensus 192 ~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 192 IRCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp HHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred hHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 9999999999888 89999999999998643
No 34
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.87 E-value=3.5e-22 Score=146.20 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=90.1
Q ss_pred CceeCHHHHHHhhhCCcEEEecCC--------hhhhcccCCCCcccccccc-cccc-------CC-CCChHHHHHHHhh-
Q 041947 5 VASVGVDTAKDLLSSGHRFLDVRT--------TEEFNESHVHGALNVPYLF-ITQE-------GR-VKNPEFLTQVASV- 66 (126)
Q Consensus 5 ~~~i~~~~l~~~~~~~~~iiDvR~--------~~e~~~ghI~ga~~i~~~~-~~~~-------~~-~~~~~~~~~~~~~- 66 (126)
...|+++++.++++. .+|||+|+ +.+|..||||||+|||+.. +... .. ...+.|..++...
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~g 91 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANG 91 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTT
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcC
Confidence 678999999998855 99999998 6899999999999999986 6432 12 2335677777755
Q ss_pred cCCCCeEEEEe-CCCchHH-HHHHHHHhc--CcceecccHHhHHhCCCCCCCC
Q 041947 67 CSKEDHIIVVC-NSGGRAL-RACVDLRNA--HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 67 ~~~~~~ivvyc-~~g~~s~-~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
++++++||||| .+|.+++ .+++.|... +|++|+||+.+|.++|+|++..
T Consensus 92 i~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~~V~~L~GG~~aW~~~g~pv~~~ 144 (373)
T 1okg_A 92 MAGELPVLCYDDECGAMGGCRLWWMLNSLGADAYVINGGFQACKAAGLEMESG 144 (373)
T ss_dssp CSSSSCEEEECSSTTTTTHHHHHHHHHHHTCCEEEETTTTHHHHTTTCCEECS
T ss_pred CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCeEEEeCCCHHHHHhhcCCcccC
Confidence 78899999999 7777887 666556655 8999999999999999998876
No 35
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.87 E-value=1.5e-22 Score=119.50 Aligned_cols=76 Identities=32% Similarity=0.548 Sum_probs=65.5
Q ss_pred CcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhh-cCCCCeEEEEeCCCchHHHHHHHHHhc---Cc
Q 041947 20 GHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASV-CSKEDHIIVVCNSGGRALRACVDLRNA---HV 95 (126)
Q Consensus 20 ~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ivvyc~~g~~s~~~~~~l~~~---~v 95 (126)
+.+|||+|++.||..||||||+|+|+. ++...+... ++++++||+||.+|.+|..++..|.+. +|
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~-----------~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLK-----------EVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHH-----------HHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSE
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHH-----------HHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999996 344455554 478899999999999999999999988 78
Q ss_pred ceecccHHhHHh
Q 041947 96 TKLEGGYSAWVD 107 (126)
Q Consensus 96 ~~l~gG~~~w~~ 107 (126)
+++ ||+.+|..
T Consensus 70 ~~l-GG~~~w~~ 80 (85)
T 2jtq_A 70 ENA-GGLKDIAM 80 (85)
T ss_dssp EEE-EETTTCCS
T ss_pred Eec-cCHHHHhc
Confidence 888 99999954
No 36
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.87 E-value=1.4e-21 Score=138.10 Aligned_cols=110 Identities=24% Similarity=0.408 Sum_probs=90.2
Q ss_pred ceeCHHHHHHhhh----CCcEEEecCChhhhc----------------ccCCCCcccccccccccc-CCCCC-hHHHHHH
Q 041947 6 ASVGVDTAKDLLS----SGHRFLDVRTTEEFN----------------ESHVHGALNVPYLFITQE-GRVKN-PEFLTQV 63 (126)
Q Consensus 6 ~~i~~~~l~~~~~----~~~~iiDvR~~~e~~----------------~ghI~ga~~i~~~~~~~~-~~~~~-~~~~~~~ 63 (126)
..|+++++.+.+. ++..|||+|++.||. .||||||+|||+..+.+. +.+.+ +++...+
T Consensus 146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~ 225 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALY 225 (285)
T ss_dssp GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHH
T ss_pred eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHH
Confidence 3599999999883 666899999999997 799999999999876542 33333 4455556
Q ss_pred Hhh-cCCCCeEEEEeCCCchHHHHHHHHH-hc---CcceecccHHhHH-hCCCCCCCC
Q 041947 64 ASV-CSKEDHIIVVCNSGGRALRACVDLR-NA---HVTKLEGGYSAWV-DEGVAGDKP 115 (126)
Q Consensus 64 ~~~-~~~~~~ivvyc~~g~~s~~~~~~l~-~~---~v~~l~gG~~~w~-~~g~~~~~~ 115 (126)
... ++++++||+||.+|.+|..++..|. .+ +|++|+||+.+|. .+|+|++..
T Consensus 226 ~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 226 EPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp GGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 554 6889999999999999999888888 66 8999999999998 799998764
No 37
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.87 E-value=5.3e-22 Score=128.96 Aligned_cols=106 Identities=17% Similarity=0.237 Sum_probs=78.1
Q ss_pred CCceeCHHHHHHhhh-----CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEe-
Q 041947 4 DVASVGVDTAKDLLS-----SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVC- 77 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~-----~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc- 77 (126)
.+..|+++++.++++ ++.+|||+|++ ||..||||||+|||+..+.... -+++...+.. ...+.||+||
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~---~~~l~~~l~~--~~~~~vV~yC~ 76 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEM---YEKLAKTLFE--EKKELAVFHCA 76 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHH---HHHHHHHHHH--TTCCEEEEECS
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHH---HHHHHHHhcc--cCCCEEEEEcC
Confidence 567899999999984 37899999999 9999999999999997653210 0112222221 2344577789
Q ss_pred CCCchHHHHH----HHHHhc-----CcceecccHHhHHhCCCCCCCC
Q 041947 78 NSGGRALRAC----VDLRNA-----HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 78 ~~g~~s~~~~----~~l~~~-----~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
.+|.++..++ ..|.+. +|++|.||+.+|.+++.++..+
T Consensus 77 ~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~~ 123 (152)
T 2j6p_A 77 QSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRPD 123 (152)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCGG
T ss_pred CCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCCC
Confidence 6899988877 333333 5889999999999999887754
No 38
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.86 E-value=6.1e-22 Score=135.28 Aligned_cols=102 Identities=26% Similarity=0.374 Sum_probs=78.4
Q ss_pred CCCceeCHHHHHHhh-hC------CcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhh--c--CCCC
Q 041947 3 GDVASVGVDTAKDLL-SS------GHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASV--C--SKED 71 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~-~~------~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~ 71 (126)
..+..|+++++.+++ ++ +++|||||++.||..||||||+|||..+ .+...+... + ++++
T Consensus 54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~----------~l~~~l~~~~~~~~~~~k 123 (216)
T 3op3_A 54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQE----------ELFNFFLKKPIVPLDTQK 123 (216)
T ss_dssp SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHH----------HHHHHHTSSCCCCSSTTS
T ss_pred CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHH----------HHHHHHhhccccccccCC
Confidence 357889999999999 33 6899999999999999999999999852 222333221 1 2344
Q ss_pred --eEEEEeC-CCchHHHHHHHHHhc-------------CcceecccHHhHHhCCCCCCC
Q 041947 72 --HIIVVCN-SGGRALRACVDLRNA-------------HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 72 --~ivvyc~-~g~~s~~~~~~l~~~-------------~v~~l~gG~~~w~~~g~~~~~ 114 (126)
.||+||. +|.|+..++.+|... +|++|.||+.+|.++...+..
T Consensus 124 ~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce 182 (216)
T 3op3_A 124 RIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE 182 (216)
T ss_dssp EEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence 4999999 999999999988863 799999999999987555543
No 39
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.86 E-value=2.7e-22 Score=128.17 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=75.5
Q ss_pred ceeCHHHHHH--------hh-hCCcEEEecCChhhhcccCCCCcccccccccccc-CC-CCChHHHHHHHhh-c-C----
Q 041947 6 ASVGVDTAKD--------LL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQE-GR-VKNPEFLTQVASV-C-S---- 68 (126)
Q Consensus 6 ~~i~~~~l~~--------~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~-~~-~~~~~~~~~~~~~-~-~---- 68 (126)
..|+++++.+ .+ +++.+|||+|++.||..||||||+|+|+..+... .. .....+...+... . .
T Consensus 1 k~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
T 2ouc_A 1 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKR 80 (142)
T ss_dssp CEECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHH
T ss_pred CccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhc
Confidence 3689999998 66 5578999999999999999999999999764321 00 0011111111100 0 0
Q ss_pred -CCCeEEEEeCCCchH---------HHHHHHHHhc--CcceecccHHhHHhCCCCCCCC
Q 041947 69 -KEDHIIVVCNSGGRA---------LRACVDLRNA--HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 69 -~~~~ivvyc~~g~~s---------~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
.+++||+||.+|.++ ..++..|... +|++|+||+.+|.++|.++..+
T Consensus 81 ~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~~v~~l~GG~~~w~~~g~~~~~~ 139 (142)
T 2ouc_A 81 IFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQNHENLCDN 139 (142)
T ss_dssp HHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTCCCEEETTHHHHHTTTCGGGEEE
T ss_pred cCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCCcEEEEccCHHHHHHHCHHhhcc
Confidence 268899999999875 3456666666 8999999999999999887654
No 40
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.86 E-value=2.8e-21 Score=147.14 Aligned_cols=101 Identities=24% Similarity=0.329 Sum_probs=88.7
Q ss_pred CCceeCHHHHHHhh-h-CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc-CCCCeEEEEeCCC
Q 041947 4 DVASVGVDTAKDLL-S-SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC-SKEDHIIVVCNSG 80 (126)
Q Consensus 4 ~~~~i~~~~l~~~~-~-~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ivvyc~~g 80 (126)
.+..|+++++.+++ + ++.+|||+|++.+|..||||||+|||++ +|..++.... +++++|||||.+|
T Consensus 5 ~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~-----------~~~~~~~~l~~~~~~~iVvyc~~g 73 (539)
T 1yt8_A 5 QIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLS-----------RLELEIHARVPRRDTPITVYDDGE 73 (539)
T ss_dssp -CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGG-----------GHHHHHHHHSCCTTSCEEEECSSS
T ss_pred cCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHH-----------HHHHHHHhhCCCCCCeEEEEECCC
Confidence 46789999999999 3 4799999999999999999999999996 4556666664 5789999999999
Q ss_pred chHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 81 GRALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 81 ~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
.++..+++.|... +|++|+||+.+|+++|+|+++.
T Consensus 74 ~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 111 (539)
T 1yt8_A 74 GLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRD 111 (539)
T ss_dssp SHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCS
T ss_pred ChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccC
Confidence 9999999988888 8999999999999999999866
No 41
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.86 E-value=1.5e-21 Score=132.99 Aligned_cols=103 Identities=22% Similarity=0.388 Sum_probs=83.1
Q ss_pred CCCceeCHHHHHHhhh-------CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHH--hhcC--CCC
Q 041947 3 GDVASVGVDTAKDLLS-------SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVA--SVCS--KED 71 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~-------~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~ 71 (126)
..+..|+++++.+++. ++.+|||||++.||..||||||+|||+..+.. .++. ..++ +++
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~----------~~~~~~~~l~~~~d~ 110 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAE----------SFLLKSPIAPCSLDK 110 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHH----------HHHHTTTCCCSSTTS
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHH----------HhhhhhhhccccCCC
Confidence 4678899999999983 37899999999999999999999999964321 1122 1233 678
Q ss_pred eE--EEEeC-CCchHHHHHHHHHh----------c---CcceecccHHhHHhCCCCCCCC
Q 041947 72 HI--IVVCN-SGGRALRACVDLRN----------A---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 72 ~i--vvyc~-~g~~s~~~~~~l~~----------~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+| |+||. +|.++..++..|.+ . +|++|.||+.+|.+++.++..+
T Consensus 111 ~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 111 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred CeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 87 78899 99999999888874 3 8999999999999999988654
No 42
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.86 E-value=7.6e-22 Score=129.10 Aligned_cols=102 Identities=20% Similarity=0.358 Sum_probs=82.9
Q ss_pred CCCceeCHHHHHHhhh-------CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHH-Hh--h-cCCCC
Q 041947 3 GDVASVGVDTAKDLLS-------SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQV-AS--V-CSKED 71 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~-------~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~-~~--~-~~~~~ 71 (126)
..+..|+++++.++++ ++.+|||+|++.||..||||||+|||+..+. ... .. . .++++
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~-----------~~~~~~~~~~~~~~~ 88 (161)
T 1c25_A 20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEV-----------EDFLLKKPIVPTDGK 88 (161)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHH-----------HHHTTTSCCCCCTTS
T ss_pred CCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHH-----------HHHHhhhhhccCCCC
Confidence 3567899999999993 3789999999999999999999999996432 211 11 1 25677
Q ss_pred eE--EEEeC-CCchHHHHHHHHHh------------c-CcceecccHHhHHhCCCCCCCC
Q 041947 72 HI--IVVCN-SGGRALRACVDLRN------------A-HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 72 ~i--vvyc~-~g~~s~~~~~~l~~------------~-~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+| |+||. +|.++..++..|.+ . +|++|.||+.+|.+++.|+..+
T Consensus 89 ~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~ 148 (161)
T 1c25_A 89 RVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP 148 (161)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred CeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence 76 67899 99999999998874 2 8999999999999999888765
No 43
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.86 E-value=3.6e-21 Score=138.23 Aligned_cols=108 Identities=21% Similarity=0.387 Sum_probs=89.3
Q ss_pred ceeCHHHHHHhhhCCcEEEecCChhhhcc----------------cCCCCccccccccccc-cCCCCC-hHHHHHHHhhc
Q 041947 6 ASVGVDTAKDLLSSGHRFLDVRTTEEFNE----------------SHVHGALNVPYLFITQ-EGRVKN-PEFLTQVASVC 67 (126)
Q Consensus 6 ~~i~~~~l~~~~~~~~~iiDvR~~~e~~~----------------ghI~ga~~i~~~~~~~-~~~~~~-~~~~~~~~~~~ 67 (126)
..++++++.+.+... +|||+|++.||.. ||||||+|||+..+.+ ++.+.+ +++...+ ..+
T Consensus 179 ~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~-~~l 256 (318)
T 3hzu_A 179 IRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLY-DFI 256 (318)
T ss_dssp TBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHT-TTC
T ss_pred ccccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHh-cCC
Confidence 467899999988554 9999999999998 9999999999986543 333434 3444444 446
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHh-c---CcceecccHHhHHh-CCCCCCCC
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRN-A---HVTKLEGGYSAWVD-EGVAGDKP 115 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~-~---~v~~l~gG~~~w~~-~g~~~~~~ 115 (126)
+++++||+||.+|.+|..++..|.+ + +|++|+||+.+|.. .++|+++.
T Consensus 257 ~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g 309 (318)
T 3hzu_A 257 NPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAG 309 (318)
T ss_dssp CTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCS
T ss_pred CCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccC
Confidence 8899999999999999999999987 5 79999999999995 79999876
No 44
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.86 E-value=5.5e-22 Score=128.74 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=78.5
Q ss_pred ceeCHHHHHHhhh---CCcEEEecCChhhhcccCCCCcccccccccccc----CCCCChHHH-HHHHh--hcCCCCeEEE
Q 041947 6 ASVGVDTAKDLLS---SGHRFLDVRTTEEFNESHVHGALNVPYLFITQE----GRVKNPEFL-TQVAS--VCSKEDHIIV 75 (126)
Q Consensus 6 ~~i~~~~l~~~~~---~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~----~~~~~~~~~-~~~~~--~~~~~~~ivv 75 (126)
+.|+++++.+++. ++.+|||+|++.||..||||||+|||+..+... +......+. ..... .++++++|||
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iVv 83 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVV 83 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEEE
Confidence 5799999999983 578999999999999999999999999755210 111111111 00001 1367899999
Q ss_pred EeCCCchHHHH------HHHHH--h--c-CcceecccHHhHHhCCCCCCCC
Q 041947 76 VCNSGGRALRA------CVDLR--N--A-HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 76 yc~~g~~s~~~------~~~l~--~--~-~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
||.+|.++..+ +..|. . . +|++|+||+.+|.+++.++...
T Consensus 84 yc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~ 134 (153)
T 2vsw_A 84 YDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEG 134 (153)
T ss_dssp ECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC
T ss_pred EeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcC
Confidence 99999887654 24443 2 2 8999999999999886666554
No 45
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.86 E-value=2.5e-21 Score=136.28 Aligned_cols=108 Identities=23% Similarity=0.407 Sum_probs=87.1
Q ss_pred eeCHHHHHHhhhCCcEEEecCChhhhcc----------------cCCCCccccccccccc-cCCCCC-hHHHHHHHhh-c
Q 041947 7 SVGVDTAKDLLSSGHRFLDVRTTEEFNE----------------SHVHGALNVPYLFITQ-EGRVKN-PEFLTQVASV-C 67 (126)
Q Consensus 7 ~i~~~~l~~~~~~~~~iiDvR~~~e~~~----------------ghI~ga~~i~~~~~~~-~~~~~~-~~~~~~~~~~-~ 67 (126)
.++++++.+.+..+. |||+|++.||.. ||||||+|||+..+.. .+.+.+ +++...+... +
T Consensus 145 ~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~ 223 (277)
T 3aay_A 145 RAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGL 223 (277)
T ss_dssp EECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTC
T ss_pred hcCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 378999999884333 999999999985 9999999999986543 233333 4566666654 6
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHh-c---CcceecccHHhHHh-CCCCCCCC
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRN-A---HVTKLEGGYSAWVD-EGVAGDKP 115 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~-~---~v~~l~gG~~~w~~-~g~~~~~~ 115 (126)
+++++||+||.+|.+|..++..|.+ + +|++|+||+.+|.. +|+|+++.
T Consensus 224 ~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 224 DNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp CTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred CCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 8899999999999999998888886 5 79999999999998 99998753
No 46
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.85 E-value=2.5e-21 Score=128.20 Aligned_cols=103 Identities=21% Similarity=0.356 Sum_probs=80.4
Q ss_pred CCCceeCHHHHHHhhh-------CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHh--hcC--CCC
Q 041947 3 GDVASVGVDTAKDLLS-------SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVAS--VCS--KED 71 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~-------~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~ 71 (126)
..+..|+++++.++++ ++.+|||||++.||..||||||+|||+..+.. .++.. .++ +++
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~----------~~~~~~~~~~~~~~~ 90 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAE----------SFLLKSPIAPCSLDK 90 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHH----------HHHHSSCCCC----C
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHH----------HhhhhhhhccccCCC
Confidence 3567899999999993 37899999999999999999999999964321 11221 223 678
Q ss_pred eEEE--EeC-CCchHHHHHHHHHh----------c---CcceecccHHhHHhCCCCCCCC
Q 041947 72 HIIV--VCN-SGGRALRACVDLRN----------A---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 72 ~ivv--yc~-~g~~s~~~~~~l~~----------~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+||| ||+ +|.+|..++..|.+ + +|++|.||+.+|.+++.|+..+
T Consensus 91 ~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~ 150 (175)
T 2a2k_A 91 RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 150 (175)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence 8754 698 89999998888873 2 8999999999999999988544
No 47
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.85 E-value=3.9e-21 Score=132.21 Aligned_cols=96 Identities=25% Similarity=0.391 Sum_probs=80.9
Q ss_pred ceeCHHHHHHhhhCCcEEEecCChhhhcc----------cCCCCccccccccccccCCCCChHHHHHHHh-hcCCCCeEE
Q 041947 6 ASVGVDTAKDLLSSGHRFLDVRTTEEFNE----------SHVHGALNVPYLFITQEGRVKNPEFLTQVAS-VCSKEDHII 74 (126)
Q Consensus 6 ~~i~~~~l~~~~~~~~~iiDvR~~~e~~~----------ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iv 74 (126)
..|+++++.+ +.+|||+|++.||.. ||||||+|+|+..+.... + .+.. .++++++||
T Consensus 121 ~~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-----e---~~~~~~~~~~~~iv 188 (230)
T 2eg4_A 121 WLLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-----G---LLERLGLQPGQEVG 188 (230)
T ss_dssp GBCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-----T---HHHHHTCCTTCEEE
T ss_pred ceeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-----H---HHHhcCCCCCCCEE
Confidence 3577777766 789999999999999 999999999998775431 1 2222 357899999
Q ss_pred EEeCCCchHHHHHHHHHhc--CcceecccHHhHHhCCCCCC
Q 041947 75 VVCNSGGRALRACVDLRNA--HVTKLEGGYSAWVDEGVAGD 113 (126)
Q Consensus 75 vyc~~g~~s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~~~ 113 (126)
+||.+|.+|..++..|..+ +|++|.||+.+|..+|+|++
T Consensus 189 ~~C~~G~rs~~a~~~L~~~G~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 189 VYCHSGARSAVAFFVLRSLGVRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp EECSSSHHHHHHHHHHHHTTCEEEECSSHHHHHHHTTCCCB
T ss_pred EEcCChHHHHHHHHHHHHcCCCcEEecCcHHHHhhcCCCCC
Confidence 9999999999999999888 89999999999999999976
No 48
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.85 E-value=1.2e-21 Score=147.02 Aligned_cols=99 Identities=28% Similarity=0.529 Sum_probs=85.9
Q ss_pred CCceeCHHHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 4 DVASVGVDTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 4 ~~~~i~~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
....++++++.+.+ +++.+|||+|++.||..||||||+|+|+.++. ..+. .++++++||+||.+|.+
T Consensus 372 ~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~-----------~~~~-~l~~~~~vvv~C~~G~r 439 (474)
T 3tp9_A 372 SYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLA-----------AHIH-DVPRDGSVCVYCRTGGR 439 (474)
T ss_dssp CCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCHHHHT-----------TTGG-GSCSSSCEEEECSSSHH
T ss_pred cccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHH-----------HHHh-cCCCCCEEEEECCCCHH
Confidence 45679999999998 67899999999999999999999999997543 2222 25889999999999999
Q ss_pred HHHHHHHHHhc---CcceecccHHhHHhCCCCCCC
Q 041947 83 ALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDK 114 (126)
Q Consensus 83 s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~ 114 (126)
|..++..|... +|++|+||+.+|.++|+|++.
T Consensus 440 a~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 440 SAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp HHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 99999888887 799999999999999999863
No 49
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.84 E-value=1.1e-20 Score=143.84 Aligned_cols=101 Identities=24% Similarity=0.386 Sum_probs=89.2
Q ss_pred CCCceeCHHHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCc
Q 041947 3 GDVASVGVDTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGG 81 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~ 81 (126)
..+..|+++++.+.+ .++.+|||+|++.||..||||||+|+|.. ++...+.. ++++++||+||.+|.
T Consensus 374 ~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~~-----------~l~~~l~~-l~~~~~ivv~C~sG~ 441 (539)
T 1yt8_A 374 PRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRS-----------QLKQALER-LGTAERYVLTCGSSL 441 (539)
T ss_dssp CCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCGG-----------GHHHHHHH-HCCCSEEEEECSSSH
T ss_pred CcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCHH-----------HHHHHHHh-CCCCCeEEEEeCCCh
Confidence 356789999999999 56899999999999999999999999986 34444444 388999999999999
Q ss_pred hHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 82 RALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 82 ~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
+|..++..|... +|++|.||+.+|.++|+|+++.
T Consensus 442 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~~ 478 (539)
T 1yt8_A 442 LARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDG 478 (539)
T ss_dssp HHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCS
T ss_pred HHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCcccC
Confidence 999999999888 8999999999999999999876
No 50
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.84 E-value=7e-21 Score=141.21 Aligned_cols=110 Identities=19% Similarity=0.255 Sum_probs=92.0
Q ss_pred ceeCHHHHHHhhh---------CCcEEEecC--ChhhhcccCCCCcccccccccccc--C-CCCChHHHHHHHhh-cCCC
Q 041947 6 ASVGVDTAKDLLS---------SGHRFLDVR--TTEEFNESHVHGALNVPYLFITQE--G-RVKNPEFLTQVASV-CSKE 70 (126)
Q Consensus 6 ~~i~~~~l~~~~~---------~~~~iiDvR--~~~e~~~ghI~ga~~i~~~~~~~~--~-~~~~~~~~~~~~~~-~~~~ 70 (126)
..++++++.+++. ++.+|||+| ++.+|..||||||+|+|+..+... . ....+++.+.+... ++++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 4688899988873 368999999 999999999999999999877541 2 23445666666654 6889
Q ss_pred CeEEEEeCCCchHHHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 71 DHIIVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 71 ~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
++||+||.+|.+|..++..|..+ +|++|+||+.+|..+|+|++..
T Consensus 204 ~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g 251 (423)
T 2wlr_A 204 TTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERG 251 (423)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCS
T ss_pred CeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccC
Confidence 99999999999999988888877 7999999999999999999874
No 51
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.83 E-value=1.7e-20 Score=139.15 Aligned_cols=111 Identities=17% Similarity=0.275 Sum_probs=89.9
Q ss_pred ceeCHHHHHHhh-hCCcEEEecCChhhh-----------cccCCCCccccccc-------ccc-ccCCCCC-hHHHHHHH
Q 041947 6 ASVGVDTAKDLL-SSGHRFLDVRTTEEF-----------NESHVHGALNVPYL-------FIT-QEGRVKN-PEFLTQVA 64 (126)
Q Consensus 6 ~~i~~~~l~~~~-~~~~~iiDvR~~~e~-----------~~ghI~ga~~i~~~-------~~~-~~~~~~~-~~~~~~~~ 64 (126)
..|+.+++.+.+ .++.+|||+|++.|| ..||||||+|+|+. .+. .++.+.+ +++...+.
T Consensus 272 ~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 351 (423)
T 2wlr_A 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWK 351 (423)
T ss_dssp GEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHH
T ss_pred heecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHH
Confidence 458999999988 567899999999999 88999999999875 221 1222323 35555554
Q ss_pred h-hcCCCCeEEEEeCCCchHHHHHHHHHhc---CcceecccHHhHHh-CCCCCCCCc
Q 041947 65 S-VCSKEDHIIVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVD-EGVAGDKPL 116 (126)
Q Consensus 65 ~-~~~~~~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~-~g~~~~~~~ 116 (126)
. .++++++||+||.+|.||..++..|..+ +|++|.||+.+|.. .++|++...
T Consensus 352 ~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~ 408 (423)
T 2wlr_A 352 AWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGE 408 (423)
T ss_dssp TTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSS
T ss_pred HcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCC
Confidence 3 3688999999999999999999998887 79999999999998 899998763
No 52
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.82 E-value=8.7e-21 Score=123.05 Aligned_cols=104 Identities=21% Similarity=0.199 Sum_probs=75.4
Q ss_pred CCceeCHHHHHHhh-hC--CcEEEecCChhhhcccCCCCccccccccccc-----c-----CCCCChHHHHHHHhhcCCC
Q 041947 4 DVASVGVDTAKDLL-SS--GHRFLDVRTTEEFNESHVHGALNVPYLFITQ-----E-----GRVKNPEFLTQVASVCSKE 70 (126)
Q Consensus 4 ~~~~i~~~~l~~~~-~~--~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~ 70 (126)
....|+++++.+++ ++ +.+|||+|++.+|..||||||+|||+..+.. . ..++.......+.. ++++
T Consensus 14 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 92 (154)
T 1hzm_A 14 MAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTR-RCGT 92 (154)
T ss_dssp CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHH-STTS
T ss_pred cccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhc-cCCC
Confidence 45688999999988 44 7999999999999999999999999976431 1 12222222333333 4678
Q ss_pred CeEEEEeCCCchH------HHH-HHHHHh---c--CcceecccHHhHHhC
Q 041947 71 DHIIVVCNSGGRA------LRA-CVDLRN---A--HVTKLEGGYSAWVDE 108 (126)
Q Consensus 71 ~~ivvyc~~g~~s------~~~-~~~l~~---~--~v~~l~gG~~~w~~~ 108 (126)
++|||||.+|.++ +.+ ++.|.. . +|++|+||+.+|..+
T Consensus 93 ~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 93 DTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAE 142 (154)
T ss_dssp SCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCCCEECCCCHHHHHHH
T ss_pred CeEEEEeCCCCccccccccchHHHHHHHHHHHCCCceEEEcChHHHHHHH
Confidence 8999999988765 233 333332 2 689999999999875
No 53
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=117.95 Aligned_cols=106 Identities=19% Similarity=0.280 Sum_probs=76.0
Q ss_pred CCCceeCHHHHHHhhh---------CCcEEEecCChhhhcccCCCCcccccccccc-----ccCCCCChHHHHHHH----
Q 041947 3 GDVASVGVDTAKDLLS---------SGHRFLDVRTTEEFNESHVHGALNVPYLFIT-----QEGRVKNPEFLTQVA---- 64 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~---------~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~-----~~~~~~~~~~~~~~~---- 64 (126)
..+..|+++++.++++ ++.+|||+|++.+|..||||||+|+|+..+. ..+... +...+.
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~---~~~~~~~~~~ 84 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKIT---VLDLISCREG 84 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCC---HHHHTCCCCS
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCccc---HHhhcCCHHH
Confidence 3578899999999984 3689999999999999999999999998653 111110 000000
Q ss_pred -hhc--CCCCeEEEEeCCCc---------hHHHHHHHHHhc--CcceecccHHhHHhCCCC
Q 041947 65 -SVC--SKEDHIIVVCNSGG---------RALRACVDLRNA--HVTKLEGGYSAWVDEGVA 111 (126)
Q Consensus 65 -~~~--~~~~~ivvyc~~g~---------~s~~~~~~l~~~--~v~~l~gG~~~w~~~g~~ 111 (126)
..+ ..+++|||||.+|. ++..++..|... +|++|.||+.+|..+.-.
T Consensus 85 ~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~~v~~L~GG~~~W~~~~p~ 145 (158)
T 3tg1_B 85 KDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQNHEN 145 (158)
T ss_dssp SCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTCCEEEETTHHHHHTSSCGG
T ss_pred HHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCCcEEEeCCcHHHHHHHhhh
Confidence 001 24789999999984 578888888877 899999999999876433
No 54
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.80 E-value=3.5e-19 Score=116.17 Aligned_cols=108 Identities=13% Similarity=0.188 Sum_probs=73.3
Q ss_pred CCCceeCHHHHHHhh-hC--CcEEEecCChhhhcccCCCCccccccccccccC-------CCCChHHHHHHHhhcCCCCe
Q 041947 3 GDVASVGVDTAKDLL-SS--GHRFLDVRTTEEFNESHVHGALNVPYLFITQEG-------RVKNPEFLTQVASVCSKEDH 72 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~-~~--~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 72 (126)
.....|+++++.+++ ++ +++|||||++.||..||||||+|||...+.... .++ +. ...+.....+.+.
T Consensus 17 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp-~~-~~~l~~~~~~~~~ 94 (157)
T 2gwf_A 17 RGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLP-DD-SKDTWKKRGNVEY 94 (157)
T ss_dssp --CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSC-HH-HHHHHHTTTTSSE
T ss_pred CCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcC-HH-HHHHHHhcCCCCE
Confidence 356789999999988 44 789999999999999999999999997654211 111 11 1111122234556
Q ss_pred EEEEeCCCch----HHHHHHHHH----h------c--CcceecccHHhHHhCCCCCC
Q 041947 73 IIVVCNSGGR----ALRACVDLR----N------A--HVTKLEGGYSAWVDEGVAGD 113 (126)
Q Consensus 73 ivvyc~~g~~----s~~~~~~l~----~------~--~v~~l~gG~~~w~~~g~~~~ 113 (126)
||+||.++.+ ++.+++.|. + . +|+++.||+.+|... +|..
T Consensus 95 VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~ 150 (157)
T 2gwf_A 95 VVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQY 150 (157)
T ss_dssp EEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGG
T ss_pred EEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chhh
Confidence 9999987753 233444443 1 2 489999999999984 6654
No 55
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.79 E-value=4.3e-19 Score=115.72 Aligned_cols=110 Identities=13% Similarity=0.189 Sum_probs=75.8
Q ss_pred CCCceeCHHHHHHhh-hC--CcEEEecCChhhhcccCCCCccccccccccccC-------CCCChHHHHHHHhhcCCCCe
Q 041947 3 GDVASVGVDTAKDLL-SS--GHRFLDVRTTEEFNESHVHGALNVPYLFITQEG-------RVKNPEFLTQVASVCSKEDH 72 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~-~~--~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 72 (126)
.....|+++++.+++ .+ +++|||||++.||..||||||+|||...+.... .+++. ....+... ...+.
T Consensus 12 ~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~-~~~~~~~~-~~~~~ 89 (157)
T 1whb_A 12 KEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDD-SKDTWKKR-GNVEY 89 (157)
T ss_dssp CCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTT-HHHHHHGG-GTSSE
T ss_pred ccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChH-HHHHHHhc-CCCCE
Confidence 356789999999988 44 789999999999999999999999987653210 11111 11111111 34456
Q ss_pred EEEEeCCCch----HHHHHHHHHh----------c--CcceecccHHhHHhCCCCCCCC
Q 041947 73 IIVVCNSGGR----ALRACVDLRN----------A--HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 73 ivvyc~~g~~----s~~~~~~l~~----------~--~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
||+||.++.+ +..+++.|.+ . +|+++.||+.+|... +|....
T Consensus 90 VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 147 (157)
T 1whb_A 90 VVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 147 (157)
T ss_dssp EEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBS
T ss_pred EEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhC
Confidence 9999987753 2344555441 2 489999999999985 776544
No 56
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.79 E-value=1.4e-19 Score=138.56 Aligned_cols=94 Identities=21% Similarity=0.424 Sum_probs=81.6
Q ss_pred CCCceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 3 GDVASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 3 ~~~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
..+..|+++++.+++.++.+|||+|++.||..||||||+|+|++.+. ..+.. ++++++||+||.+|.+
T Consensus 486 ~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~-----------~~~~~-l~~~~~iv~~C~~g~r 553 (588)
T 3ics_A 486 GFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPLDELR-----------DRLEE-VPVDKDIYITCQLGMR 553 (588)
T ss_dssp TSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCHHHHT-----------TCGGG-SCSSSCEEEECSSSHH
T ss_pred cccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCHHHHH-----------HHHhh-CCCCCeEEEECCCCcH
Confidence 35678999999999977899999999999999999999999996543 22222 4788999999999999
Q ss_pred HHHHHHHHHhc--CcceecccHHhHHhC
Q 041947 83 ALRACVDLRNA--HVTKLEGGYSAWVDE 108 (126)
Q Consensus 83 s~~~~~~l~~~--~v~~l~gG~~~w~~~ 108 (126)
|..+++.|.+. +|++|.||+.+|.++
T Consensus 554 s~~a~~~l~~~G~~v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 554 GYVAARMLMEKGYKVKNVDGGFKLYGTV 581 (588)
T ss_dssp HHHHHHHHHHTTCCEEEETTHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEcchHHHHHhh
Confidence 99999999888 899999999999875
No 57
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.8e-19 Score=127.05 Aligned_cols=110 Identities=13% Similarity=0.107 Sum_probs=88.4
Q ss_pred CceeCHHHHHHhh-h---CCcEEEecC--------C-hhhh-cccCCCCccccccccccccC------CCCChHHHHHHH
Q 041947 5 VASVGVDTAKDLL-S---SGHRFLDVR--------T-TEEF-NESHVHGALNVPYLFITQEG------RVKNPEFLTQVA 64 (126)
Q Consensus 5 ~~~i~~~~l~~~~-~---~~~~iiDvR--------~-~~e~-~~ghI~ga~~i~~~~~~~~~------~~~~~~~~~~~~ 64 (126)
+..||+++|.+++ . ..+++||++ . ..|| .+||||||++++++.+.+.. +...++|.+.+.
T Consensus 27 ~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~ 106 (327)
T 3utn_X 27 FDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS 106 (327)
T ss_dssp CEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 3479999999999 2 347899985 2 3466 67999999999998765422 334477889998
Q ss_pred hh-cCCCCeEEEEeCCCchHHHHHHHHHhc----CcceecccHHhHHhCCCCCCCC
Q 041947 65 SV-CSKEDHIIVVCNSGGRALRACVDLRNA----HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 65 ~~-~~~~~~ivvyc~~g~~s~~~~~~l~~~----~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
.+ |+++++||||++.+..++..++|+++. +|++|+|| .+|+++|+|+++.
T Consensus 107 ~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~ 161 (327)
T 3utn_X 107 NLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSS 161 (327)
T ss_dssp HTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCC
T ss_pred HcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccC
Confidence 88 999999999999887777677777777 89999877 8999999999765
No 58
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.78 E-value=1e-19 Score=138.47 Aligned_cols=93 Identities=27% Similarity=0.412 Sum_probs=79.4
Q ss_pred CCceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchH
Q 041947 4 DVASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRA 83 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s 83 (126)
.+..|+++++.++ +++.+|||+|++.||..+|||||+|+|++.+.. .+. .++++++||+||.+|.||
T Consensus 471 ~~~~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~-----------~~~-~~~~~~~iv~~c~~g~rs 537 (565)
T 3ntd_A 471 DATPIHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRD-----------RMH-ELPKDKEIIIFSQVGLRG 537 (565)
T ss_dssp SCCEECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTT-----------SGG-GSCTTSEEEEECSSSHHH
T ss_pred ccceeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHH-----------HHh-hcCCcCeEEEEeCCchHH
Confidence 3566788887776 678999999999999999999999999976542 222 257899999999999999
Q ss_pred HHHHHHHHhc--CcceecccHHhHHhCC
Q 041947 84 LRACVDLRNA--HVTKLEGGYSAWVDEG 109 (126)
Q Consensus 84 ~~~~~~l~~~--~v~~l~gG~~~w~~~g 109 (126)
..+++.|.+. +|++|.||+.+|+++|
T Consensus 538 ~~a~~~l~~~G~~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 538 NVAYRQLVNNGYRARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHHHHHTTCCEEEETTHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEcChHHHHHhCc
Confidence 9999999888 8999999999999875
No 59
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.76 E-value=6.3e-19 Score=128.97 Aligned_cols=98 Identities=19% Similarity=0.320 Sum_probs=76.2
Q ss_pred hCCcEEEecCChhhhc-----------ccCCCCcccccccccc--c-cCC-CCC-hHHHHHHHhh---cCC---CCeEEE
Q 041947 18 SSGHRFLDVRTTEEFN-----------ESHVHGALNVPYLFIT--Q-EGR-VKN-PEFLTQVASV---CSK---EDHIIV 75 (126)
Q Consensus 18 ~~~~~iiDvR~~~e~~-----------~ghI~ga~~i~~~~~~--~-~~~-~~~-~~~~~~~~~~---~~~---~~~ivv 75 (126)
.++.+|||+|++.||. .||||||+|||+..+. + .+. +.+ +++...+... +++ +++||+
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 4568999999999999 9999999999998875 3 222 222 3454545432 366 899999
Q ss_pred EeCCCchHHHHHHHHHhc---CcceecccHHhHHh-CCCCCCCC
Q 041947 76 VCNSGGRALRACVDLRNA---HVTKLEGGYSAWVD-EGVAGDKP 115 (126)
Q Consensus 76 yc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~-~g~~~~~~ 115 (126)
||.+|.||..++..|..+ +|++|+||+.+|.. .++|+++.
T Consensus 252 yC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 252 SCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp ECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred ECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 999999999999998877 79999999999997 67876543
No 60
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.75 E-value=1.1e-18 Score=130.86 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=84.8
Q ss_pred CCceeCHHHHHHhhhCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchH
Q 041947 4 DVASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRA 83 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s 83 (126)
.+..|++++|.+++..+ +|||+|++.+|..||||||+|+|++ ..|..++.+..+++++|||||.++. +
T Consensus 271 ~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA~~i~~~----------~~~~~~~~~l~~~~~~vvvy~~~~~-~ 338 (474)
T 3tp9_A 271 ERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGSLNIPWN----------KSFVTWAGWLLPADRPIHLLAADAI-A 338 (474)
T ss_dssp EECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTCEECCSS----------TTHHHHHHHHCCSSSCEEEECCTTT-H
T ss_pred CCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCeEEECcc----------hHHHHHHHhcCCCCCeEEEEECCCc-H
Confidence 35679999999999556 9999999999999999999999984 3678888888788999999999776 5
Q ss_pred HHHHHHHHhc---CcceecccHHhHHhCCCCCCCC
Q 041947 84 LRACVDLRNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 84 ~~~~~~l~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
..++++|..+ +|+.|.+|+.+|..++.++...
T Consensus 339 ~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~ 373 (474)
T 3tp9_A 339 PDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASY 373 (474)
T ss_dssp HHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECC
T ss_pred HHHHHHHHHcCCcceEEecCcHHHHHhcccccccc
Confidence 5677777777 8888777999999998887654
No 61
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.74 E-value=5.2e-18 Score=116.55 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=69.9
Q ss_pred hCCcEEEecCChhhhcccCCCCccccccc--cccccC---C-CCChHHHHHHHhhcCCCCeEEEEeCCCc-hHHHHHHHH
Q 041947 18 SSGHRFLDVRTTEEFNESHVHGALNVPYL--FITQEG---R-VKNPEFLTQVASVCSKEDHIIVVCNSGG-RALRACVDL 90 (126)
Q Consensus 18 ~~~~~iiDvR~~~e~~~ghI~ga~~i~~~--~~~~~~---~-~~~~~~~~~~~~~~~~~~~ivvyc~~g~-~s~~~~~~l 90 (126)
.++.+|||+|++.+|..||||||+|+|+. .+.... . ...+.|..++... ..+++|||||.+|. ++..+++.|
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivvyc~~g~~~s~~a~~~L 82 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTL-GLRSPVVLYDEGLTSRLCRTAFFL 82 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT-TCCSSEEEECSSSCHHHHHHHHHH
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhc-CCCCEEEEEcCCCCccHHHHHHHH
Confidence 35789999999999999999999999997 443100 0 0013455555555 55889999999998 888888888
Q ss_pred Hhc---CcceecccHHhHHhCCCCCCCC
Q 041947 91 RNA---HVTKLEGGYSAWVDEGVAGDKP 115 (126)
Q Consensus 91 ~~~---~v~~l~gG~~~w~~~g~~~~~~ 115 (126)
. + +|++|+|| |.. +|++..
T Consensus 83 ~-~G~~~v~~l~GG---W~~--~p~~~~ 104 (230)
T 2eg4_A 83 G-LGGLEVQLWTEG---WEP--YATEKE 104 (230)
T ss_dssp H-HTTCCEEEECSS---CGG--GCCBCS
T ss_pred H-cCCceEEEeCCC---Ccc--CcccCC
Confidence 8 8 79999999 877 777554
No 62
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.71 E-value=4.2e-17 Score=117.37 Aligned_cols=104 Identities=17% Similarity=0.304 Sum_probs=77.8
Q ss_pred eeCHHHHHHhhh-----CCcEEEecCChhhhc-----------ccCCCCccccccccccccC-C-CC-C-hHHHHHH---
Q 041947 7 SVGVDTAKDLLS-----SGHRFLDVRTTEEFN-----------ESHVHGALNVPYLFITQEG-R-VK-N-PEFLTQV--- 63 (126)
Q Consensus 7 ~i~~~~l~~~~~-----~~~~iiDvR~~~e~~-----------~ghI~ga~~i~~~~~~~~~-~-~~-~-~~~~~~~--- 63 (126)
.++.+++.+.+. ++.+|||+|++.+|. .||||||+|+|+..+.+.. . .. . +.+...+
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 467788888772 346899999999985 5999999999998876532 1 22 1 2222222
Q ss_pred -Hh---hcCCCCeEEEEeCCCchHHHHHHHHHhc---CcceecccHHhHHhCCC
Q 041947 64 -AS---VCSKEDHIIVVCNSGGRALRACVDLRNA---HVTKLEGGYSAWVDEGV 110 (126)
Q Consensus 64 -~~---~~~~~~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~~~w~~~g~ 110 (126)
.. .++++++||+||++|.++...+..|..+ ++.+|+|+|..|.....
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~ 318 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSG 318 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHC
T ss_pred HHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccC
Confidence 21 3578899999999999998887777666 79999999999987543
No 63
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.69 E-value=1.3e-18 Score=130.48 Aligned_cols=83 Identities=27% Similarity=0.347 Sum_probs=0.0
Q ss_pred HHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHH
Q 041947 13 AKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRALRACVDLR 91 (126)
Q Consensus 13 l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~ 91 (126)
+.+.+ +++.+|||+|++.||..||||||+|+|+..+. ..+.. ++++++||+||.+|.+|..++..|.
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-----------~~~~~-l~~~~~iv~~C~~G~rs~~a~~~L~ 446 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLL-----------ETDLP-FNKNDVIYVHCQSGIRSSIAIGILE 446 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHH-----------HHHhh-CCCCCeEEEECCCChHHHHHHHHHH
Confidence 34444 56789999999999999999999999997543 22222 4788999999999999999998888
Q ss_pred hc---CcceecccHHhHHh
Q 041947 92 NA---HVTKLEGGYSAWVD 107 (126)
Q Consensus 92 ~~---~v~~l~gG~~~w~~ 107 (126)
.. +|++|.||+.+|.+
T Consensus 447 ~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 447 HKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -------------------
T ss_pred HcCCCCEEEecChHHHHhh
Confidence 87 89999999999975
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.44 E-value=1.4e-13 Score=103.26 Aligned_cols=77 Identities=17% Similarity=0.317 Sum_probs=61.6
Q ss_pred hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHHhc---C
Q 041947 18 SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRALRACVDLRNA---H 94 (126)
Q Consensus 18 ~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~---~ 94 (126)
+++++|||+|++.+|..||||||+|+|+ ...|..++.+.++++++||+||. +.++..++++|... +
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv~ip~----------~~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~ 362 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTINIPY----------DKNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYDD 362 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCEECCS----------STTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcEECCc----------cHHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhccc
Confidence 5678999999999999999999999998 34678888887889999999999 55777777777777 7
Q ss_pred cce-ecccHHhH
Q 041947 95 VTK-LEGGYSAW 105 (126)
Q Consensus 95 v~~-l~gG~~~w 105 (126)
|+. ++|+...|
T Consensus 363 v~~~l~g~~~~~ 374 (466)
T 3r2u_A 363 IAGYQLPQSKIQ 374 (466)
T ss_dssp EEEEECCC----
T ss_pred ccccccCccccc
Confidence 776 55654443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.29 E-value=2.1e-06 Score=55.31 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=48.9
Q ss_pred eCHHHHHHhh-hCCcEEEecCChhh------------hccc-CCCCccccccccccccCCCCChHHHHHHHhhc-CCCCe
Q 041947 8 VGVDTAKDLL-SSGHRFLDVRTTEE------------FNES-HVHGALNVPYLFITQEGRVKNPEFLTQVASVC-SKEDH 72 (126)
Q Consensus 8 i~~~~l~~~~-~~~~~iiDvR~~~e------------~~~g-hI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 72 (126)
++++++..+. .+-..|||+|+..| +..+ +|.|.+|+|+... ....+.+ ..+...+ ..+++
T Consensus 30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~----~~~~~~~-~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR----DIQKHDV-ETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT----TCCHHHH-HHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC----CCCHHHH-HHHHHHHHhCCCC
Confidence 5667777666 44468999997765 3344 5998999998532 1112222 2222222 35789
Q ss_pred EEEEeCCCchHHHHHHH
Q 041947 73 IIVVCNSGGRALRACVD 89 (126)
Q Consensus 73 ivvyc~~g~~s~~~~~~ 89 (126)
|+|||.+|.|+...+..
T Consensus 105 VlvHC~sG~Rs~~l~al 121 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGF 121 (156)
T ss_dssp EEEECSSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99999999988754443
No 66
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=95.10 E-value=0.0028 Score=41.23 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=22.7
Q ss_pred cEEEecCChhhhcccCCCCccccccccccc
Q 041947 21 HRFLDVRTTEEFNESHVHGALNVPYLFITQ 50 (126)
Q Consensus 21 ~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~ 50 (126)
.++||||...||. |||+|||...++.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~ 147 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEV 147 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHH
Confidence 4899999999999 9999999876543
No 67
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=95.07 E-value=0.04 Score=34.21 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=42.4
Q ss_pred HHHHHHhh-hCCcEEEecCChhhhcccCCCCc--cccccccccccCCCCCh---HHHHHHHhhcCCCCeEEEEeCCCc-h
Q 041947 10 VDTAKDLL-SSGHRFLDVRTTEEFNESHVHGA--LNVPYLFITQEGRVKNP---EFLTQVASVCSKEDHIIVVCNSGG-R 82 (126)
Q Consensus 10 ~~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga--~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ivvyc~~g~-~ 82 (126)
++++..+. .+=..|||+|+..+......+|- +++|+.... ....+ ++...+......+.+|+|+|..|. |
T Consensus 25 ~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~R 101 (150)
T 4erc_A 25 PAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC---PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGR 101 (150)
T ss_dssp HHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTS---CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHH
T ss_pred HHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCC---CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH
Confidence 44554444 34469999998766433333442 244443221 11112 233333333346789999998884 7
Q ss_pred HHHH-HHHHHh
Q 041947 83 ALRA-CVDLRN 92 (126)
Q Consensus 83 s~~~-~~~l~~ 92 (126)
+... +.+|..
T Consensus 102 sg~~~a~~l~~ 112 (150)
T 4erc_A 102 TGTMLACYLVK 112 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 7643 433444
No 68
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=94.93 E-value=0.049 Score=33.77 Aligned_cols=70 Identities=11% Similarity=0.106 Sum_probs=37.5
Q ss_pred hCCcEEEecCChhhhcccCCCC--ccccccccccccCCCCCh---HHHHHHHhhcCCCCeEEEEeCCC-chHHHHHHHH
Q 041947 18 SSGHRFLDVRTTEEFNESHVHG--ALNVPYLFITQEGRVKNP---EFLTQVASVCSKEDHIIVVCNSG-GRALRACVDL 90 (126)
Q Consensus 18 ~~~~~iiDvR~~~e~~~ghI~g--a~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~~~~l 90 (126)
.+-..|||+++..++....+++ -.++|+.... ....+ ++...+...+..+.+|+|+|..| +|+...+...
T Consensus 35 ~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~---~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~ 110 (151)
T 2img_A 35 LGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC---PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACY 110 (151)
T ss_dssp TTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTC---CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCC---CCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHHHHHHHH
Confidence 3446899999876654333332 3445543211 11112 23333333334678999999877 4765554433
No 69
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=92.76 E-value=0.49 Score=29.31 Aligned_cols=84 Identities=8% Similarity=0.008 Sum_probs=43.7
Q ss_pred CHHHHHHhh-hCCcEEEecCChhhhcc-------cCCCCccccccccccccC-CCCChHHHHHHHhhcC-CCCeEEEEeC
Q 041947 9 GVDTAKDLL-SSGHRFLDVRTTEEFNE-------SHVHGALNVPYLFITQEG-RVKNPEFLTQVASVCS-KEDHIIVVCN 78 (126)
Q Consensus 9 ~~~~l~~~~-~~~~~iiDvR~~~e~~~-------ghI~ga~~i~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~ivvyc~ 78 (126)
+..++..+. .+=..|||+|+..+... ..| .-+++|+.....+. ....+.+...+....+ .+.+|+|+|.
T Consensus 22 ~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi-~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~ 100 (151)
T 1xri_A 22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCK 100 (151)
T ss_dssp CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTC-EEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECS
T ss_pred CccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCC-eEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECC
Confidence 344544433 34569999998665321 111 12445543211111 1112334444443333 5688999999
Q ss_pred CC-chHHHHHHHHHhc
Q 041947 79 SG-GRALRACVDLRNA 93 (126)
Q Consensus 79 ~g-~~s~~~~~~l~~~ 93 (126)
.| +|+...+..++..
T Consensus 101 aG~~RTg~~~a~~l~~ 116 (151)
T 1xri_A 101 RGKHRTGCLVGCLRKL 116 (151)
T ss_dssp SSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 88 5877776555544
No 70
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=92.09 E-value=0.43 Score=31.53 Aligned_cols=74 Identities=15% Similarity=0.200 Sum_probs=37.2
Q ss_pred HHHHHhh-hCCcEEEecCChhhhcccCCC---------C--ccccccccccccCCCCCh---HHHHHHHhhcCCCCeEEE
Q 041947 11 DTAKDLL-SSGHRFLDVRTTEEFNESHVH---------G--ALNVPYLFITQEGRVKNP---EFLTQVASVCSKEDHIIV 75 (126)
Q Consensus 11 ~~l~~~~-~~~~~iiDvR~~~e~~~ghI~---------g--a~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ivv 75 (126)
+++..+. .+=..|||+|+..|...-.++ | -+++|+... ...... .+...+...+..+.+|+|
T Consensus 62 ~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~---~~p~~~~~~~~~~~i~~~~~~~~~VlV 138 (212)
T 1fpz_A 62 KDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG---GTPDIASCCEIMEELTTCLKNYRKTLI 138 (212)
T ss_dssp HHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT---CCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC---CCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 3344333 455699999998664321111 1 123333211 111111 233333333346788999
Q ss_pred EeCCC-chHHHHH
Q 041947 76 VCNSG-GRALRAC 87 (126)
Q Consensus 76 yc~~g-~~s~~~~ 87 (126)
+|..| +|+...+
T Consensus 139 HC~aG~gRTg~~~ 151 (212)
T 1fpz_A 139 HSYGGLGRSCLVA 151 (212)
T ss_dssp ECSSSSSHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 99877 4655543
No 71
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=91.90 E-value=0.41 Score=30.32 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=35.8
Q ss_pred cEEEecCChhhhcccCCCCccccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHHH-HHHHHhc
Q 041947 21 HRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALRA-CVDLRNA 93 (126)
Q Consensus 21 ~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~~ 93 (126)
..|||+|+..+-...++ .-+++|+.......... -.+....+......+.+|+|+|..| +|+... +..|...
T Consensus 34 ~~Vi~l~~~~~~~~~~i-~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 34 THILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp EEEEECSTTCCCCSTTC-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred cEEEEecCCCCCCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 58999997543111111 12344443211111100 0122233333334678999999988 787764 5555544
No 72
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=91.90 E-value=0.21 Score=31.62 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=35.0
Q ss_pred cEEEecCChhhhcccCCCC--ccccccccccccCCC-CChHHHHHHHhhcCCCCeEEEEeCCC-chHHHH-HHHHHhc
Q 041947 21 HRFLDVRTTEEFNESHVHG--ALNVPYLFITQEGRV-KNPEFLTQVASVCSKEDHIIVVCNSG-GRALRA-CVDLRNA 93 (126)
Q Consensus 21 ~~iiDvR~~~e~~~ghI~g--a~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~~ 93 (126)
..|||+|+..+.. ...| -+++|+......... .-.+....+...+..+.+|+|+|..| +|+... +.+|...
T Consensus 39 ~~Vi~l~~~~~~~--~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 39 TLCVNVSRQQPGP--RAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp EEEEECSSSCCCC--CCTTCEEEECCCCSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCCC--CCCCCEEEEEeCcCCCCchHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4899999865421 1122 234454321111000 00122233333334678999999988 677644 3444443
No 73
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=91.85 E-value=0.35 Score=29.84 Aligned_cols=71 Identities=10% Similarity=0.044 Sum_probs=36.3
Q ss_pred CcEEEecCChhhhcccCCCC---ccccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHH-HHHHHHhc
Q 041947 20 GHRFLDVRTTEEFNESHVHG---ALNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALR-ACVDLRNA 93 (126)
Q Consensus 20 ~~~iiDvR~~~e~~~ghI~g---a~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~-~~~~l~~~ 93 (126)
=..|||+++..+ ...++ -.++|+.......... -.+....+......+.+|+|+|..| +||.. ++.+|...
T Consensus 30 i~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 30 VRYILNVTREID---NFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp EEEEEECCSSSC---CSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCc---cCCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 358999997543 11222 2345553321111110 0122233333334678999999988 78754 44555543
No 74
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=91.15 E-value=0.73 Score=28.27 Aligned_cols=73 Identities=15% Similarity=0.083 Sum_probs=36.3
Q ss_pred CCcEEEecCChhh-hcccCCCCccccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHH-HHHHHHh
Q 041947 19 SGHRFLDVRTTEE-FNESHVHGALNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALR-ACVDLRN 92 (126)
Q Consensus 19 ~~~~iiDvR~~~e-~~~ghI~ga~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~-~~~~l~~ 92 (126)
+=..||++++... +...++ .-.++|+.......... -.+....+......+.+|+|+|..| +|+.. ++.+|..
T Consensus 29 gI~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~ 105 (144)
T 3ezz_A 29 GITALLNVSSDCPNHFEGHY-QYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMM 105 (144)
T ss_dssp TCCEEEECSSSCCCTTTTTS-EEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCCccCCCCc-eEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHHHHHH
Confidence 4468999997432 111111 12345554322221111 1233344444445678999999987 47654 3444444
No 75
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=90.40 E-value=0.49 Score=29.70 Aligned_cols=71 Identities=10% Similarity=0.073 Sum_probs=35.2
Q ss_pred CCcEEEecCChhhhcccCCCC--ccccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 19 SGHRFLDVRTTEEFNESHVHG--ALNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 19 ~~~~iiDvR~~~e~~~ghI~g--a~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
+=..|||+|+..+. ...| -+++|+.......... -.+....+......+.+|+|+|..| +|+... +..|..
T Consensus 33 gI~~Vi~l~~~~~~---~~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~ 108 (160)
T 1yz4_A 33 KITHIISIHESPQP---LLQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMT 108 (160)
T ss_dssp TCCEEEEECSSCCC---CCTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCCC---ccCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHHHHHH
Confidence 34589999975431 1122 1344543211111000 0122333333334678899999988 787643 344433
No 76
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=89.88 E-value=0.66 Score=30.34 Aligned_cols=68 Identities=12% Similarity=0.189 Sum_probs=33.7
Q ss_pred cEEEecCChhhhcc-cCCCCccccccccccccCCC-CChHHHHHHHhhcCCCCeEEEEeCCC-chHHHHHHH
Q 041947 21 HRFLDVRTTEEFNE-SHVHGALNVPYLFITQEGRV-KNPEFLTQVASVCSKEDHIIVVCNSG-GRALRACVD 89 (126)
Q Consensus 21 ~~iiDvR~~~e~~~-ghI~ga~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~~~~ 89 (126)
..|||+|+..+... .++ .-.++|.......... .-.++...+......+.+|+|+|..| .|+...+..
T Consensus 75 ~~Vi~l~~~~~~~~~~~~-~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~ 145 (195)
T 2q05_A 75 KYVLNLTMDKYTLPNSNI-NIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILA 145 (195)
T ss_dssp SEEEECSSSCCCCTTCCC-EEEECCCCCSSSCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHH
T ss_pred CEEEEECCCCCCcccCCc-EEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHH
Confidence 58999998653211 111 1123443321111000 00234444444334578899999988 676655443
No 77
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=89.45 E-value=0.67 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=21.1
Q ss_pred HHHHHhhcCC-CCeEEEEeCCC-chHHH-HHHHHHhc
Q 041947 60 LTQVASVCSK-EDHIIVVCNSG-GRALR-ACVDLRNA 93 (126)
Q Consensus 60 ~~~~~~~~~~-~~~ivvyc~~g-~~s~~-~~~~l~~~ 93 (126)
...+...+.. +.+|+|+|..| +|+.. ++..|...
T Consensus 104 ~~~i~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~ 140 (183)
T 3f81_A 104 ADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140 (183)
T ss_dssp HHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 3344443333 78999999988 57766 45555443
No 78
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=89.24 E-value=0.76 Score=29.89 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=35.5
Q ss_pred CCcEEEecCChhhhcccCCCCc--cccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 19 SGHRFLDVRTTEEFNESHVHGA--LNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 19 ~~~~iiDvR~~~e~~~ghI~ga--~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
+=..|||+++..+ ....+|- +++|+.......... -.+....+......+.+|+|+|..| +|+... +.+|..
T Consensus 51 gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm~ 127 (190)
T 2wgp_A 51 GITCIVNATIEIP--NFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMK 127 (190)
T ss_dssp TCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 3458999997542 1122332 334443211111100 0122333333334578899999988 777643 444444
No 79
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=87.95 E-value=3.6 Score=28.78 Aligned_cols=29 Identities=14% Similarity=0.131 Sum_probs=20.5
Q ss_pred CceeCHHHHHHhh-hCCcEEEecCChhhhc
Q 041947 5 VASVGVDTAKDLL-SSGHRFLDVRTTEEFN 33 (126)
Q Consensus 5 ~~~i~~~~l~~~~-~~~~~iiDvR~~~e~~ 33 (126)
+..++++++..+. -+=-.|||.|+..|..
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~ 82 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSREVA 82 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHHHH
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhhhh
Confidence 3456777776655 3446999999988853
No 80
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=87.81 E-value=1.1 Score=27.48 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=34.5
Q ss_pred CCcEEEecCChhhhcccCCCC--ccccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 19 SGHRFLDVRTTEEFNESHVHG--ALNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 19 ~~~~iiDvR~~~e~~~ghI~g--a~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
+=..||+++...+ .....| -.++|+.......... -.+....+......+.+|+|+|..| +||... +.+|..
T Consensus 29 gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~ 105 (144)
T 3s4e_A 29 KVTHILNVAYGVE--NAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMN 105 (144)
T ss_dssp TCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 3458999986332 111111 2345543322111110 1222333333345678899999887 465443 444444
No 81
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=86.90 E-value=0.84 Score=29.15 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=17.9
Q ss_pred HHHHHhhcCCCCeEEEEeCCC-chHHHHH
Q 041947 60 LTQVASVCSKEDHIIVVCNSG-GRALRAC 87 (126)
Q Consensus 60 ~~~~~~~~~~~~~ivvyc~~g-~~s~~~~ 87 (126)
...+......+.+|+|+|..| +|+...+
T Consensus 98 ~~~i~~~~~~~~~VlVHC~aG~~RSg~~v 126 (176)
T 3cm3_A 98 TAFLSKCDQRNEPVLVHSAAGVNRSGAMI 126 (176)
T ss_dssp HHHHHHHHHHTCCEEEECSSSSSHHHHHH
T ss_pred HHHHHHHHHCCCcEEEECCcCCCHHHHHH
Confidence 333443334578899999987 6765543
No 82
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=86.23 E-value=1.6 Score=29.02 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=35.5
Q ss_pred CCcEEEecCChhh-hcccCCCCccccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHH-HHHHHHh
Q 041947 19 SGHRFLDVRTTEE-FNESHVHGALNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALR-ACVDLRN 92 (126)
Q Consensus 19 ~~~~iiDvR~~~e-~~~ghI~ga~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~-~~~~l~~ 92 (126)
+=..|||++.... +...+| .-.++|+.......... -.+....+...+..+.+|+|+|..| .|+.. ++.+|..
T Consensus 31 GIt~VInl~~e~~~~~~~gi-~y~~ipi~D~~~~~l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~ 107 (211)
T 2g6z_A 31 HITALLNVSRRTSEACMTHL-HYKWIPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107 (211)
T ss_dssp TCCEEEECSSCCCCTTCTTS-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCccccccCC-EEEEeeCCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHH
Confidence 4458999997532 111111 12345543221111100 0223333333345678999999988 67764 3445544
No 83
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=84.79 E-value=1.2 Score=27.79 Aligned_cols=22 Identities=32% Similarity=0.282 Sum_probs=15.2
Q ss_pred CCCeEEEEeCCC-chHHHHHHHH
Q 041947 69 KEDHIIVVCNSG-GRALRACVDL 90 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~~~~~l 90 (126)
++.+|+|+|..| +|+...+...
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~ 130 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALA 130 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHH
Confidence 378999999877 5665544433
No 84
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=83.90 E-value=6.6 Score=25.64 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=17.6
Q ss_pred CCCeEEEEeCCC-chHHHH-HHHHHhc
Q 041947 69 KEDHIIVVCNSG-GRALRA-CVDLRNA 93 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~~-~~~l~~~ 93 (126)
.+.+|+|+|..| +||... +.+|...
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~ 156 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIY 156 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHH
Confidence 678899999988 777643 4445543
No 85
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=83.71 E-value=3 Score=26.82 Aligned_cols=23 Identities=30% Similarity=0.277 Sum_probs=16.1
Q ss_pred CCCCeEEEEeCCC-chHHHHHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRACVDL 90 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~~~~l 90 (126)
.++.+|+|.|..| +|+...+...
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~ 138 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALA 138 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHH
T ss_pred CCCCcEEEECCCCCCHHHHHHHHH
Confidence 5778999999877 5665544433
No 86
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=83.36 E-value=1.7 Score=26.82 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=20.1
Q ss_pred HHHhhcCCCCeEEEEeCCCc-hHHHH-HHHHHh
Q 041947 62 QVASVCSKEDHIIVVCNSGG-RALRA-CVDLRN 92 (126)
Q Consensus 62 ~~~~~~~~~~~ivvyc~~g~-~s~~~-~~~l~~ 92 (126)
.+......+.+|+|+|..|. |+... +..|..
T Consensus 81 ~i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~ 113 (157)
T 3rgo_A 81 FALKYQALGQCVYVHCKAGRSRSATMVAAYLIQ 113 (157)
T ss_dssp HHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCChHHHHHHHHHHH
Confidence 33333456789999999885 77665 444444
No 87
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=82.91 E-value=1.5 Score=27.03 Aligned_cols=25 Identities=24% Similarity=0.270 Sum_probs=18.0
Q ss_pred CCCeEEEEeCCC-chHH-HHHHHHHhc
Q 041947 69 KEDHIIVVCNSG-GRAL-RACVDLRNA 93 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~-~~~~~l~~~ 93 (126)
.+.+|+|+|..| +|+. .++.+|...
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~ 110 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLY 110 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 678999999988 7777 444545443
No 88
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=82.16 E-value=1.9 Score=30.92 Aligned_cols=81 Identities=11% Similarity=0.144 Sum_probs=42.4
Q ss_pred CHHHHHHhh----hCCcEEEecCChhhhcccCCCCcc-ccccccccccCCCCCh---HHHHHHHhhc--CCCCeEEEEeC
Q 041947 9 GVDTAKDLL----SSGHRFLDVRTTEEFNESHVHGAL-NVPYLFITQEGRVKNP---EFLTQVASVC--SKEDHIIVVCN 78 (126)
Q Consensus 9 ~~~~l~~~~----~~~~~iiDvR~~~e~~~ghI~ga~-~i~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~ivvyc~ 78 (126)
..+++...+ .+...|++++++..|......+.+ ++|+... ...+.+ .+...+...+ +++..|+|.|.
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~---~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC~ 127 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDH---NVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSK 127 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTT---SCCCHHHHHHHHHHHHHHHHTCTTCEEEEECS
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCC---CCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 356666666 467899999876666655444332 3444311 111111 2222332222 45678999998
Q ss_pred CC-chHHH-HHHHHHh
Q 041947 79 SG-GRALR-ACVDLRN 92 (126)
Q Consensus 79 ~g-~~s~~-~~~~l~~ 92 (126)
.| .|+.. ++.+|..
T Consensus 128 ~G~gRtg~~ia~~Li~ 143 (339)
T 3v0d_A 128 GGKGRTGTLVSSWLLE 143 (339)
T ss_dssp SSSHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHH
Confidence 66 34433 3444443
No 89
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=80.50 E-value=2.4 Score=26.02 Aligned_cols=26 Identities=15% Similarity=0.313 Sum_probs=18.4
Q ss_pred cCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 67 CSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 67 ~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
...+.+|+|+|..| +|+... +.+|..
T Consensus 80 ~~~~~~VlVHC~~G~~RSg~~~~ayl~~ 107 (149)
T 1zzw_A 80 HQCGKGLLIHCQAGVSRSATIVIAYLMK 107 (149)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 34678999999988 787764 344544
No 90
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=79.43 E-value=2.5 Score=26.06 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=37.0
Q ss_pred CCcEEEecCChhhhc--ccCCC-Cc--cccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHHH-HHHH
Q 041947 19 SGHRFLDVRTTEEFN--ESHVH-GA--LNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALRA-CVDL 90 (126)
Q Consensus 19 ~~~~iiDvR~~~e~~--~ghI~-ga--~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l 90 (126)
+=..|||+|+..+-. ....+ |- +++|........... -.+....+...+..+.+|+|+|..| +|+... +.+|
T Consensus 33 gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~~~~ayl 112 (154)
T 2r0b_A 33 GITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYI 112 (154)
T ss_dssp TCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred CCeEEEEeCCccccccCCCCCcCceeEEEEECCCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHHHHHHHHH
Confidence 345899999876532 11122 21 344443221111100 0122233333334678999999988 787754 3444
Q ss_pred Hh
Q 041947 91 RN 92 (126)
Q Consensus 91 ~~ 92 (126)
..
T Consensus 113 ~~ 114 (154)
T 2r0b_A 113 ME 114 (154)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 91
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=78.63 E-value=2.9 Score=25.96 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=18.0
Q ss_pred cCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 67 CSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 67 ~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
...+.+|+|+|..| .|+... +.+|..
T Consensus 82 ~~~~~~VlVHC~~G~~RS~~vv~ayLm~ 109 (155)
T 2hxp_A 82 LSQNCGVLVHSLAGVSRSVTVTVAYLMQ 109 (155)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHcCCcEEEECCCCCchhHHHHHHHHHH
Confidence 34678999999988 777654 344443
No 92
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=75.03 E-value=8.8 Score=23.49 Aligned_cols=22 Identities=14% Similarity=0.062 Sum_probs=14.2
Q ss_pred HHHHHhh-hCCcEEEecCChhhh
Q 041947 11 DTAKDLL-SSGHRFLDVRTTEEF 32 (126)
Q Consensus 11 ~~l~~~~-~~~~~iiDvR~~~e~ 32 (126)
+++..+. .+=..|||+|+..|.
T Consensus 19 ~d~~~L~~~gi~~Vi~l~~~~e~ 41 (161)
T 2i6j_A 19 NEILEWRKEGVKRVLVLPEDWEI 41 (161)
T ss_dssp HHHHHHHHHTCCEEEECSCHHHH
T ss_pred HHHHHHHHCCCCEEEEcCchhhh
Confidence 3444433 445689999998664
No 93
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=74.52 E-value=4.3 Score=25.82 Aligned_cols=30 Identities=13% Similarity=0.309 Sum_probs=19.8
Q ss_pred HHhhcCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 63 VASVCSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 63 ~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
+......+.+|+|+|..| +|+... +.+|..
T Consensus 80 i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 80 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 333334678999999988 777664 444544
No 94
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=73.97 E-value=4.1 Score=26.24 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=35.4
Q ss_pred CCcEEEecCChhhhcccCCCCc--cccccccccccCCCC-ChHHHHHHHhhcCCCCeEEEEeCCC-chHHH-HHHHHHh
Q 041947 19 SGHRFLDVRTTEEFNESHVHGA--LNVPYLFITQEGRVK-NPEFLTQVASVCSKEDHIIVVCNSG-GRALR-ACVDLRN 92 (126)
Q Consensus 19 ~~~~iiDvR~~~e~~~ghI~ga--~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivvyc~~g-~~s~~-~~~~l~~ 92 (126)
+=..||+++...+ ....+|- +++|+.......... -.+....+...+..+.+|+|+|..| +||.. ++.+|..
T Consensus 45 gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~ 121 (188)
T 2esb_A 45 QITMVINVSVEVV--NTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMK 121 (188)
T ss_dssp TCCEEEECCSSCC--CCCCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHH
Confidence 3458999997432 1112222 244443211110000 0122233333334678999999988 77764 3455543
No 95
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=73.01 E-value=6.2 Score=26.16 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=21.3
Q ss_pred HHHHhhc-CCCCeEEEEeCCC-chHHH-HHHHHHhc
Q 041947 61 TQVASVC-SKEDHIIVVCNSG-GRALR-ACVDLRNA 93 (126)
Q Consensus 61 ~~~~~~~-~~~~~ivvyc~~g-~~s~~-~~~~l~~~ 93 (126)
..+...+ ..+.+|+|+|..| .||.. ++.+|...
T Consensus 129 ~fI~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 164 (219)
T 2y96_A 129 AFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIH 164 (219)
T ss_dssp HHHHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 3444444 4678999999988 67765 44445543
No 96
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=71.87 E-value=6.1 Score=28.33 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=15.3
Q ss_pred CCCCeEEEEeCCC-chHHHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRACV 88 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~~~ 88 (126)
..+.+|+|+|..| +|+...+.
T Consensus 267 ~~~~~VLVHC~aG~gRTGtvva 288 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTLIA 288 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHHHH
T ss_pred hCCCcEEEECCCCCChHHHHHH
Confidence 5678999999987 56554433
No 97
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=70.56 E-value=1.5 Score=27.37 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=26.7
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc---CcceecccHHhH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA---HVTKLEGGYSAW 105 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~---~v~~l~gG~~~w 105 (126)
++|+++|.++ .||..+..+++.+ .+.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 4699999865 5777777777766 577888888876
No 98
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=70.26 E-value=3.4 Score=26.05 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=25.8
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--------CcceecccHHhH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--------HVTKLEGGYSAW 105 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--------~v~~l~gG~~~w 105 (126)
++|+++|.++ .||..+..+++.+ ++.+...|...|
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 45 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc
Confidence 3699999866 5777766666665 267888888876
No 99
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=69.10 E-value=9.7 Score=27.53 Aligned_cols=71 Identities=8% Similarity=0.182 Sum_probs=37.3
Q ss_pred HHHHHhh----hCCcEEEecCChhhhcccCCCCcc-ccccccccccCCCCChH---HHHHHHhhc--CCCCeEEEEeCCC
Q 041947 11 DTAKDLL----SSGHRFLDVRTTEEFNESHVHGAL-NVPYLFITQEGRVKNPE---FLTQVASVC--SKEDHIIVVCNSG 80 (126)
Q Consensus 11 ~~l~~~~----~~~~~iiDvR~~~e~~~ghI~ga~-~i~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~ivvyc~~g 80 (126)
+++.+.+ .+.+.|++++. ..|......+.+ ++|+.. .+..+.+. +...+...+ +++..|+|+|..|
T Consensus 50 ~~v~~~L~~~H~~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD---~~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG 125 (361)
T 3n0a_A 50 DDIRSFLDSRHLDHYTVYNLSP-KSYRTAKFHSRVSECSWPI---RQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDG 125 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEECSS-SCCGGGSCGGGEEECCCCS---SSCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSC
T ss_pred HHHHHHHHHhCCCeEEEEECCC-CCCChhhcCCcEEEeecCC---CCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4566665 46799999965 566665555433 344321 11111111 222222221 4667899999866
Q ss_pred -chHHH
Q 041947 81 -GRALR 85 (126)
Q Consensus 81 -~~s~~ 85 (126)
+|+..
T Consensus 126 ~GRtg~ 131 (361)
T 3n0a_A 126 RAASSI 131 (361)
T ss_dssp THHHHH
T ss_pred CccHHH
Confidence 44433
No 100
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=67.60 E-value=8.1 Score=24.12 Aligned_cols=26 Identities=12% Similarity=0.284 Sum_probs=17.2
Q ss_pred CCCCeEEEEeCCC-chHHH-HHHHHHhc
Q 041947 68 SKEDHIIVVCNSG-GRALR-ACVDLRNA 93 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~-~~~~l~~~ 93 (126)
..+.+|+|+|..| +||.. ++.+|...
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 4578999999988 46544 34555443
No 101
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=67.43 E-value=9.9 Score=24.23 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=25.6
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
.++.+++|||++-..+...+..|... .+..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTCCEEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEeCCCC
Confidence 45778999999888888888888776 7778888864
No 102
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=67.20 E-value=8.1 Score=24.06 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=25.1
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--CcceecccHHh
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--HVTKLEGGYSA 104 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--~v~~l~gG~~~ 104 (126)
++|+++|.++ .||..+..+++.+ ++.+...|..+
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~~~~~v~SAGt~~ 45 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGA 45 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTSEEEEEETTC
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhcCCCEEEeccccC
Confidence 4799999866 5777777777666 77788877744
No 103
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=66.03 E-value=5.6 Score=25.90 Aligned_cols=37 Identities=24% Similarity=0.239 Sum_probs=26.8
Q ss_pred CCeEEEEeCCC-chHHHHHHHHHhc------CcceecccHHhHH
Q 041947 70 EDHIIVVCNSG-GRALRACVDLRNA------HVTKLEGGYSAWV 106 (126)
Q Consensus 70 ~~~ivvyc~~g-~~s~~~~~~l~~~------~v~~l~gG~~~w~ 106 (126)
..+|+++|.++ .||..+..+++.+ ++.+...|..+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCcC
Confidence 35799999866 5677766666665 4678888887764
No 104
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=64.58 E-value=6.4 Score=24.11 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=24.4
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc---CcceecccHHh
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA---HVTKLEGGYSA 104 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~---~v~~l~gG~~~ 104 (126)
++|+++|.++ .||..+..+++.+ ++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 4699999866 5777777777766 47777777653
No 105
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=64.53 E-value=5 Score=25.38 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCeEEEEeCCC-chHHHHHHHHHhc--------CcceecccHHhHH
Q 041947 70 EDHIIVVCNSG-GRALRACVDLRNA--------HVTKLEGGYSAWV 106 (126)
Q Consensus 70 ~~~ivvyc~~g-~~s~~~~~~l~~~--------~v~~l~gG~~~w~ 106 (126)
..+|+++|.++ .||..+..+++.+ ++.+...|...|.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 45799999866 5677766666655 2568888888774
No 106
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=64.09 E-value=9.6 Score=24.33 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=25.4
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--CcceecccHHh
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--HVTKLEGGYSA 104 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--~v~~l~gG~~~ 104 (126)
++|+++|.++ .||..+..+++.+ ++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHSTTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCC
Confidence 4799999866 5777777777766 77788888754
No 107
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=63.95 E-value=4.5 Score=25.61 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=25.5
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--------CcceecccHHhH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--------HVTKLEGGYSAW 105 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--------~v~~l~gG~~~w 105 (126)
.+|+++|.++ .||..+..+++.+ ++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 5699999866 5677766666655 366888888776
No 108
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=63.51 E-value=9.7 Score=24.55 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=20.0
Q ss_pred HHHHhhcCCCCeEEEEeCCC-chHHHH-HHHHHh
Q 041947 61 TQVASVCSKEDHIIVVCNSG-GRALRA-CVDLRN 92 (126)
Q Consensus 61 ~~~~~~~~~~~~ivvyc~~g-~~s~~~-~~~l~~ 92 (126)
..+...+..+.+|+|+|..| .||+.. +.+|..
T Consensus 108 ~fI~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~ 141 (182)
T 2j16_A 108 SIIHAATTKREKILIHAQCGLSRSATLIIAYIMK 141 (182)
T ss_dssp HHHHHHHHTTCCEEEEESSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEECCCCCChHHHHHHHHHHH
Confidence 33344345688999999987 666554 444443
No 109
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=62.69 E-value=11 Score=24.06 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=25.3
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--CcceecccHHh
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--HVTKLEGGYSA 104 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--~v~~l~gG~~~ 104 (126)
++|+++|.++ .||..+..+++.+ ++.+...|..+
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~~~~~v~SAGt~~ 59 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGA 59 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTCEEEEEETTC
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCC
Confidence 4799999866 5777777777766 77788888754
No 110
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=62.59 E-value=4.1 Score=25.75 Aligned_cols=36 Identities=11% Similarity=0.005 Sum_probs=26.2
Q ss_pred CCeEEEEeCCC-chHHHHHHHHHhc-C--------cceecccHHhH
Q 041947 70 EDHIIVVCNSG-GRALRACVDLRNA-H--------VTKLEGGYSAW 105 (126)
Q Consensus 70 ~~~ivvyc~~g-~~s~~~~~~l~~~-~--------v~~l~gG~~~w 105 (126)
..+|+++|.++ .||..+..+++.+ . +.+...|..+|
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 35699999866 5777766666665 1 77888888776
No 111
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=61.89 E-value=13 Score=22.89 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=27.7
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4567999999888888888888777 777888886
No 112
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=60.88 E-value=10 Score=23.02 Aligned_cols=24 Identities=29% Similarity=0.235 Sum_probs=16.7
Q ss_pred CCCCeEEEEeCCC-chHHHHHHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRACVDLR 91 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~~~~l~ 91 (126)
+.+.+|+|+|..| +|+...+....
T Consensus 94 ~~~~~vlVHC~aG~~Rtg~~~a~~l 118 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLGRAPVLVALAL 118 (159)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHH
Confidence 3568999999887 67665544433
No 113
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=60.36 E-value=16 Score=25.76 Aligned_cols=76 Identities=11% Similarity=0.212 Sum_probs=36.9
Q ss_pred HHHHHHhh----hCCcEEEecCChhhhcccCCCCc-cccccccccccCCCCCh---HHHHHHHhhc--CCCCeEEEEeCC
Q 041947 10 VDTAKDLL----SSGHRFLDVRTTEEFNESHVHGA-LNVPYLFITQEGRVKNP---EFLTQVASVC--SKEDHIIVVCNS 79 (126)
Q Consensus 10 ~~~l~~~~----~~~~~iiDvR~~~e~~~ghI~ga-~~i~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~ivvyc~~ 79 (126)
..++...+ .+...|+++.+...|........ .++|+... +....+ .+...+...+ +++.+|+|+|..
T Consensus 44 i~~Vv~~l~~~~~~~~~v~nl~~e~~y~~~~~~~~~~~~~~~D~---~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~a 120 (324)
T 1d5r_A 44 IDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDH---NPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKA 120 (324)
T ss_dssp HHHHHHHHHHHSSSCEEEEEEESSCCCCTTSCSSCEEEEEECTT---SCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSS
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCCCCCChHHhCCeEEEEeecCC---CCCcHHHHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 44555544 35678999865444444333222 34444211 111111 2222233322 356789999987
Q ss_pred C-chHHHHHH
Q 041947 80 G-GRALRACV 88 (126)
Q Consensus 80 g-~~s~~~~~ 88 (126)
| +|+...+.
T Consensus 121 G~gRTGt~ia 130 (324)
T 1d5r_A 121 GKGRTGVMIC 130 (324)
T ss_dssp SSHHHHHHHH
T ss_pred CCChhHHHHH
Confidence 7 45544333
No 114
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=60.34 E-value=12 Score=23.38 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=24.2
Q ss_pred CCeEEEEeCCC-chHHHHHHHHHhc---CcceecccHH
Q 041947 70 EDHIIVVCNSG-GRALRACVDLRNA---HVTKLEGGYS 103 (126)
Q Consensus 70 ~~~ivvyc~~g-~~s~~~~~~l~~~---~v~~l~gG~~ 103 (126)
-+.|+++|.++ .||..+..+++.+ ++.+...|..
T Consensus 20 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~ 57 (148)
T 3rh0_A 20 MKSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTK 57 (148)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESS
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccC
Confidence 35799999866 5777777777766 5667776654
No 115
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=60.20 E-value=8.7 Score=23.31 Aligned_cols=34 Identities=12% Similarity=0.028 Sum_probs=24.3
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc---CcceecccHHh
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA---HVTKLEGGYSA 104 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~---~v~~l~gG~~~ 104 (126)
++|+++|.++ .||..+..+++.+ ++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 4699999866 5777777777766 56677777653
No 116
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=59.77 E-value=8.2 Score=24.18 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.7
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4578999999888888888888776 778888886
No 117
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=59.66 E-value=5.8 Score=25.08 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=24.9
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--------CcceecccHHhH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--------HVTKLEGGYSAW 105 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--------~v~~l~gG~~~w 105 (126)
.+|+++|.++ .||..+...++.+ ++.+...|...|
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc
Confidence 4699999866 4677766666654 366778887777
No 118
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=59.64 E-value=6.2 Score=24.91 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=25.7
Q ss_pred CCeEEEEeCCC-chHHHHHHHHHhc--------CcceecccHHhH
Q 041947 70 EDHIIVVCNSG-GRALRACVDLRNA--------HVTKLEGGYSAW 105 (126)
Q Consensus 70 ~~~ivvyc~~g-~~s~~~~~~l~~~--------~v~~l~gG~~~w 105 (126)
..+|+++|.++ .||..+..+++.+ ++.+...|...|
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY 49 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc
Confidence 35699999866 5677766666655 266788888777
No 119
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=59.12 E-value=11 Score=22.29 Aligned_cols=26 Identities=23% Similarity=0.486 Sum_probs=20.2
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA 93 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~ 93 (126)
.+..+|++.|..|..+...+..+.+.
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~ 29 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEG 29 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHH
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHH
Confidence 34557999999998888888888776
No 120
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=58.84 E-value=16 Score=22.87 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~hg~~ 65 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM 65 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4567999999888888888888777 777888886
No 121
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=58.34 E-value=15 Score=24.80 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=15.0
Q ss_pred eCHHHHHHhh--h--CCcEEEecCCh
Q 041947 8 VGVDTAKDLL--S--SGHRFLDVRTT 29 (126)
Q Consensus 8 i~~~~l~~~~--~--~~~~iiDvR~~ 29 (126)
.++.++.+.+ . +-..|||++..
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e 92 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNT 92 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSC
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCC
Confidence 4567776666 2 34689999864
No 122
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=57.70 E-value=19 Score=22.18 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=27.2
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++...+...+..|... .+..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4567999999888888888888776 677888875
No 123
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=57.60 E-value=8.7 Score=22.48 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=18.1
Q ss_pred CeEEEEeCCCchHHHHHHHHHhc
Q 041947 71 DHIIVVCNSGGRALRACVDLRNA 93 (126)
Q Consensus 71 ~~ivvyc~~g~~s~~~~~~l~~~ 93 (126)
++|++.|++|..+...+..+.+.
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~ 26 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQ 26 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHH
T ss_pred cEEEEECCCchhHHHHHHHHHHH
Confidence 47999999997777777766665
No 124
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=56.95 E-value=8.3 Score=24.38 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=25.6
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc-------CcceecccHHhHH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA-------HVTKLEGGYSAWV 106 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~-------~v~~l~gG~~~w~ 106 (126)
.+|+++|.++ .||..+...++.+ ++.+...|...|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc
Confidence 5699999866 5677766666655 3667888887763
No 125
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=56.77 E-value=9 Score=23.33 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=23.2
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc---CcceecccHH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA---HVTKLEGGYS 103 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~---~v~~l~gG~~ 103 (126)
++|+++|.++ .||..+..+++.+ ++.+...|..
T Consensus 5 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 5 KKVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred CEEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 4699999866 4677766666666 5667776664
No 126
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=56.76 E-value=7.8 Score=24.86 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=23.9
Q ss_pred CeEEEEeCCC-chHHHHHHHHHhc--------CcceecccHHhH
Q 041947 71 DHIIVVCNSG-GRALRACVDLRNA--------HVTKLEGGYSAW 105 (126)
Q Consensus 71 ~~ivvyc~~g-~~s~~~~~~l~~~--------~v~~l~gG~~~w 105 (126)
.+|+++|.++ -||..+...++.+ .+.+..-|..+|
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~ 62 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGW 62 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccC
Confidence 4799999765 5677666666544 366777776665
No 127
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=55.93 E-value=9.3 Score=24.65 Aligned_cols=36 Identities=17% Similarity=0.092 Sum_probs=23.8
Q ss_pred CCeEEEEeCCC-chHHHHHHHHHhc------CcceecccHHhH
Q 041947 70 EDHIIVVCNSG-GRALRACVDLRNA------HVTKLEGGYSAW 105 (126)
Q Consensus 70 ~~~ivvyc~~g-~~s~~~~~~l~~~------~v~~l~gG~~~w 105 (126)
.-+|+++|.++ .||..+...++.. ++.+..-|...|
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~ 76 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAP 76 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCC
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCc
Confidence 34699999866 4666666555433 566777776555
No 128
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=53.39 E-value=18 Score=19.97 Aligned_cols=26 Identities=12% Similarity=0.065 Sum_probs=21.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA 93 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~ 93 (126)
--+++|++.|.++..+......+.++
T Consensus 48 AGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 48 AGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 45789999999999888888777654
No 129
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=53.25 E-value=17 Score=21.66 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=22.6
Q ss_pred eEEEEeCCC-chHHHHHHHHHhc--CcceecccHHh
Q 041947 72 HIIVVCNSG-GRALRACVDLRNA--HVTKLEGGYSA 104 (126)
Q Consensus 72 ~ivvyc~~g-~~s~~~~~~l~~~--~v~~l~gG~~~ 104 (126)
+|+++|.++ .||..+..+++.+ ++.+...|...
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~v~SAGt~~ 36 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAKSWKAESAGVEK 36 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCSSCCEEEEESSC
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcCCEEEEecCCCC
Confidence 488999865 5777766666666 56677766643
No 130
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=53.21 E-value=17 Score=22.64 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=14.3
Q ss_pred CCCeEEEEeCCC-chHHHHHH
Q 041947 69 KEDHIIVVCNSG-GRALRACV 88 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~~~~ 88 (126)
.+.+|+|+|..| +|+...+.
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va 132 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVC 132 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHH
Confidence 678999999877 56554433
No 131
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=52.87 E-value=17 Score=20.04 Aligned_cols=25 Identities=20% Similarity=0.252 Sum_probs=20.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHh
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRN 92 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~ 92 (126)
--+++|+|.|.+...+......+.+
T Consensus 53 AGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 53 AGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHh
Confidence 4578999999999888887777654
No 132
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=50.34 E-value=13 Score=21.80 Aligned_cols=37 Identities=11% Similarity=0.121 Sum_probs=22.3
Q ss_pred CCeEEEEeCCCchHHHHHH-HHHhc----C---cceecccHHhHH
Q 041947 70 EDHIIVVCNSGGRALRACV-DLRNA----H---VTKLEGGYSAWV 106 (126)
Q Consensus 70 ~~~ivvyc~~g~~s~~~~~-~l~~~----~---v~~l~gG~~~w~ 106 (126)
-++|++.|.+|..+...+. .+.+. + +.+-.-++....
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~~~ 62 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAK 62 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHHHh
Confidence 4679999999965544444 66555 3 334444555443
No 133
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=49.13 E-value=17 Score=21.33 Aligned_cols=25 Identities=20% Similarity=0.391 Sum_probs=17.7
Q ss_pred CCCeEEEEeCCCchHHH-HHHHHHhc
Q 041947 69 KEDHIIVVCNSGGRALR-ACVDLRNA 93 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~-~~~~l~~~ 93 (126)
..++|++.|++|..++. ++..+.+.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~ 45 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKEL 45 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHH
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHH
Confidence 34579999999965544 56766665
No 134
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=49.01 E-value=28 Score=22.22 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=26.7
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 53 ~~~~~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~ 88 (191)
T 2p6n_A 53 TPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK 88 (191)
T ss_dssp SCSCEEEECSCHHHHHHHHHHHHHHTCCEEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 3457999999888888878888766 677888875
No 135
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=48.29 E-value=16 Score=19.77 Aligned_cols=25 Identities=16% Similarity=0.387 Sum_probs=19.6
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHh
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRN 92 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~ 92 (126)
--+++|++.|.++..+......+.+
T Consensus 45 AGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 45 CGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred eeCCEEEEEECCHHHHHHHHHHHHH
Confidence 3578999999998887777776654
No 136
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=47.25 E-value=22 Score=23.67 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCC-chHHHHHHHHHhc---CcceecccH
Q 041947 69 KEDHIIVVCNSG-GRALRACVDLRNA---HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~~~~~l~~~---~v~~l~gG~ 102 (126)
...+|+++|.++ .||..+..+++.+ ++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 356799999866 5677766666665 577777775
No 137
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=46.68 E-value=53 Score=20.77 Aligned_cols=52 Identities=23% Similarity=0.402 Sum_probs=30.8
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchH
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRA 83 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s 83 (126)
++++.+ ..+..++|+-+..+ .++..| ++...+...+ ...+.-|++|.+|.-.
T Consensus 29 ~i~~~L~~~G~eV~D~G~~~~-------~~~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~ 83 (155)
T 1o1x_A 29 KVKNYLLGKGIEVEDHGTYSE-------ESVDYP-------------DYAKKVVQSILSNEADFGILLCGTGLGM 83 (155)
T ss_dssp HHHHHHHHTTCEEEECCCCSS-------SCCCHH-------------HHHHHHHHHHHTTSCSEEEEEESSSHHH
T ss_pred HHHHHHHHCCCEEEEeCCCCC-------CCCChH-------------HHHHHHHHHHHcCCCceEEEEcCCcHHH
Confidence 445555 67889999976321 222222 4445555443 3456789999998533
No 138
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=46.54 E-value=21 Score=21.51 Aligned_cols=25 Identities=28% Similarity=0.381 Sum_probs=17.4
Q ss_pred CCCeEEEEeCCCchHHHH-HHHHHhc
Q 041947 69 KEDHIIVVCNSGGRALRA-CVDLRNA 93 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~-~~~l~~~ 93 (126)
.-++|++.|++|..++.. +..+.+.
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~ 37 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKK 37 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHH
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHH
Confidence 446799999999665554 4566554
No 139
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=44.89 E-value=16 Score=23.67 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=27.0
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~lhg~~ 65 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDL 65 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4678999999877777777777766 777888885
No 140
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=44.78 E-value=56 Score=20.49 Aligned_cols=52 Identities=15% Similarity=0.344 Sum_probs=30.6
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCch
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGR 82 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~ 82 (126)
.+++.| ..+..++|+-+..+ . .++..| ++...+...+...+.-|++|.+|.-
T Consensus 24 ~i~~~L~~~G~eV~D~G~~~~---~---~~~dYp-------------d~a~~va~~V~~~d~GIliCGTGiG 76 (148)
T 4em8_A 24 FLSAYLRDLGCEVFDCGCDPK---E---HSVDYP-------------DYVHDVVREVSDTSFGVLICGTGIG 76 (148)
T ss_dssp HHHHHHHHTTCEEEECCCCTT---C---SCCCGG-------------GGTHHHHTTCBTTBEEEEEESSSHH
T ss_pred HHHHHHHHCCCEEEEeCCCCC---C---CCCChH-------------HHHHHHHHHHHHhCeEEEEccCcHH
Confidence 344555 67889999987431 1 023332 3444555554455667999998853
No 141
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=43.59 E-value=22 Score=24.72 Aligned_cols=25 Identities=24% Similarity=0.155 Sum_probs=16.5
Q ss_pred CCCeEEEEeCCC-chHHH-HHHHHHhc
Q 041947 69 KEDHIIVVCNSG-GRALR-ACVDLRNA 93 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~-~~~~l~~~ 93 (126)
.+.+|+|+|..| +||.. ++.+|...
T Consensus 105 ~g~~VLVHC~aG~sRS~tvv~ayLm~~ 131 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPAVALTYMFWV 131 (294)
T ss_dssp HCSEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCchhHHHHHHHHHHH
Confidence 478899999988 46544 44445443
No 142
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=42.98 E-value=15 Score=21.39 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=17.0
Q ss_pred CeEEEEeCCCchHHHHHHHHHhc
Q 041947 71 DHIIVVCNSGGRALRACVDLRNA 93 (126)
Q Consensus 71 ~~ivvyc~~g~~s~~~~~~l~~~ 93 (126)
-+|++.|.+|..++..+..+.+.
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~ 27 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKY 27 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHH
T ss_pred eEEEEECCChHhHHHHHHHHHHH
Confidence 35999999986555777777665
No 143
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=42.90 E-value=63 Score=21.79 Aligned_cols=43 Identities=16% Similarity=0.112 Sum_probs=27.5
Q ss_pred CeEEEEeCCC---chHHHHHHHHHhc--Cccee-ccc----------HHhHHhCCCCCC
Q 041947 71 DHIIVVCNSG---GRALRACVDLRNA--HVTKL-EGG----------YSAWVDEGVAGD 113 (126)
Q Consensus 71 ~~ivvyc~~g---~~s~~~~~~l~~~--~v~~l-~gG----------~~~w~~~g~~~~ 113 (126)
++|+|+|+.| ..+-.+|++|... +|.++ .+. +..|...|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 5899999876 4566777777777 55543 221 345666666543
No 144
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=42.90 E-value=40 Score=23.73 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=29.0
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
..+.+++|||++-..+...+..|.+. ++..+.|++.
T Consensus 274 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~~~~~~h~~~~ 311 (417)
T 2i4i_A 274 GKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 311 (417)
T ss_dssp CTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHCCCCeeEecCCCC
Confidence 46788999999888888888888776 7778888763
No 145
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=42.84 E-value=19 Score=20.01 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=19.6
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHh
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRN 92 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~ 92 (126)
--+++|+|.|.++..+......+.+
T Consensus 57 AGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 57 CGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp ECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHH
Confidence 4678999999998887777776654
No 146
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=41.72 E-value=68 Score=20.59 Aligned_cols=51 Identities=27% Similarity=0.459 Sum_probs=30.1
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCch
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGR 82 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~ 82 (126)
.+++.+ ..+..++|+-+..+ .++..| ++...+...+ ...+.-|++|.+|.-
T Consensus 37 ~i~~~L~~~G~eV~D~G~~~~-------~~~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG 90 (169)
T 3ph3_A 37 EIADFLKKRGYEVIDFGTHGN-------ESVDYP-------------DFGLKVAEAVKSGECDRGIVICGTGLG 90 (169)
T ss_dssp HHHHHHHHTTCEEEECCCCSS-------SCCCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHH
T ss_pred HHHHHHHHCCCEEEEcCCCCC-------CCCCHH-------------HHHHHHHHHHHcCCCCEEEEEcCCcHH
Confidence 344555 67789999987431 122222 4445555443 345678999999853
No 147
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=41.28 E-value=35 Score=26.13 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=29.3
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
.+..++|||.+-..+...+..|... .+..|.||+
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~~~~~~h~~l 301 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANL 301 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCCCEEEecCCC
Confidence 5688999999988888888888877 788899987
No 148
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=40.58 E-value=70 Score=20.46 Aligned_cols=54 Identities=19% Similarity=0.342 Sum_probs=28.9
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchHHH
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRALR 85 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s~~ 85 (126)
.+++.+ ..+..++|+-+..+ .++..| ++...+...+ ...+.-|++|.+|.-.+.
T Consensus 38 ~i~~~L~~~G~eV~D~G~~~~-------~~~dYP-------------d~a~~va~~V~~g~~d~GIliCGTGiG~sI 94 (166)
T 3s5p_A 38 FLQQRASAHGYEVMDLGTESD-------ASVDYP-------------DFAKIGCEAVTSGRADCCILVCGTGIGISI 94 (166)
T ss_dssp HHHHHHHHTTCEEEEEEC---------------C-------------HHHHHHHHHHHTTSCSEEEEEESSSHHHHH
T ss_pred HHHHHHHHCCCEEEEcCCCCC-------CCCCHH-------------HHHHHHHHHHHcCCCcEEEEEcCCcHHHHH
Confidence 344444 67889999976431 122222 4444444443 345668999999854333
No 149
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=39.63 E-value=40 Score=25.26 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=29.2
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
.+.+++|||++-..+...+..|... ++..|.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCCEEEecCCCC
Confidence 5678999999888888888888877 7788889874
No 150
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=39.22 E-value=70 Score=20.04 Aligned_cols=53 Identities=26% Similarity=0.423 Sum_probs=31.2
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchHH
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRAL 84 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s~ 84 (126)
.+++.+ ..+..++|+-+..+ .++..| .+...+...+ ...+.-|++|.+|.-.+
T Consensus 17 ~i~~~L~~~G~eV~D~G~~~~-------~~~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~s 72 (149)
T 3he8_A 17 EIADFLKKRGYEVIDFGTHGN-------ESVDYP-------------DFGLKVAEAVKSGECDRGIVICGTGLGIS 72 (149)
T ss_dssp HHHHHHHHTTCEEEECCCCSS-------SCCCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHHHH
T ss_pred HHHHHHHHCCCEEEEcCCCCC-------CCCCHH-------------HHHHHHHHHHHcCCCCEEEEEcCCcHHHH
Confidence 344555 67889999987431 122222 4445554443 34566899999985433
No 151
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=37.56 E-value=35 Score=23.19 Aligned_cols=35 Identities=14% Similarity=0.039 Sum_probs=26.8
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc---CcceecccH
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA---HVTKLEGGY 102 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~ 102 (126)
..+++++|||............|.+. .+..+.|+.
T Consensus 110 ~~~~kvlIFs~~~~~~~~l~~~L~~~~g~~~~~l~G~~ 147 (271)
T 1z5z_A 110 DEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGEL 147 (271)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTS
T ss_pred hCCCeEEEEeccHHHHHHHHHHHHHhcCCcEEEEECCC
Confidence 46788999999877777777777653 677888886
No 152
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=37.06 E-value=30 Score=23.13 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=24.3
Q ss_pred hcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHHhc--Ccceecc
Q 041947 32 FNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEG 100 (126)
Q Consensus 32 ~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~g 100 (126)
...|||.+.-.+|+.- . -.+++|+|++. |..+...+..|.+. +|.++..
T Consensus 12 ~~~~~~~~~~~~Pifl-----------------~--L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 12 HSSGHIEGRHMYTVML-----------------D--LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp ----------CCEEEE-----------------C--CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECS
T ss_pred cccCcccccCccccEE-----------------E--cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECC
Confidence 3568999988888841 1 14566666655 66667777777776 6666643
No 153
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=36.74 E-value=44 Score=25.96 Aligned_cols=44 Identities=9% Similarity=0.153 Sum_probs=32.2
Q ss_pred HHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 59 FLTQVASVCSKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 59 ~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
+...+...+..+..++|+|.+-.++...+..|.+. ++..+.|++
T Consensus 434 Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~~~~lh~~~ 479 (661)
T 2d7d_A 434 LIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEI 479 (661)
T ss_dssp HHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred HHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCCCeEEEeCCC
Confidence 33444444456789999999888888888888877 666777774
No 154
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=35.68 E-value=53 Score=22.59 Aligned_cols=20 Identities=25% Similarity=0.551 Sum_probs=13.8
Q ss_pred CCCCeEEEEeCCC-chHHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRAC 87 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~~ 87 (126)
....+|||+|..| +|+...+
T Consensus 207 ~~~~PivVHCsaGvGRTGtfi 227 (287)
T 2b49_A 207 VDSEPVLVHCSAGIGRTGVLV 227 (287)
T ss_dssp CTTCCEEEECSSSSHHHHHHH
T ss_pred cCCCcEEEEcCCCCcHHHHHH
Confidence 3468999999877 4554433
No 155
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=35.17 E-value=83 Score=19.69 Aligned_cols=52 Identities=23% Similarity=0.324 Sum_probs=31.0
Q ss_pred HHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCch
Q 041947 11 DTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGR 82 (126)
Q Consensus 11 ~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~ 82 (126)
+.+++.+ ..+..++|+-+..+ .++..| ++...+...+ ...+.-|++|.+|.-
T Consensus 17 ~~i~~~L~~~G~eV~D~G~~~~-------~~~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG 71 (149)
T 2vvr_A 17 HEIVAHLVERGVEVIDKGTWSS-------ERTDYP-------------HYASQVALAVAGGEVDGGILICGTGVG 71 (149)
T ss_dssp HHHHHHHHHTTCEEEECCCCSS-------SCCCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHH
T ss_pred HHHHHHHHHCCCEEEEeCCCCC-------CCCChH-------------HHHHHHHHHHHcCCCceEEEEeCCcHH
Confidence 3455666 67889999976321 122222 4445555543 345678999999853
No 156
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=34.99 E-value=37 Score=26.43 Aligned_cols=44 Identities=9% Similarity=0.039 Sum_probs=31.9
Q ss_pred HHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 59 FLTQVASVCSKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 59 ~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
+...+...+..+..++|+|.+-.++...+..|.+. ++..+.|++
T Consensus 428 Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~~~~lh~~~ 473 (664)
T 1c4o_A 428 LMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHEL 473 (664)
T ss_dssp HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred HHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCceeecCCC
Confidence 33344433346789999999888888888888877 676777775
No 157
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=33.68 E-value=45 Score=22.72 Aligned_cols=27 Identities=15% Similarity=0.324 Sum_probs=19.1
Q ss_pred CeEEEEeCCC---chHHHHHHHHHhc--Ccce
Q 041947 71 DHIIVVCNSG---GRALRACVDLRNA--HVTK 97 (126)
Q Consensus 71 ~~ivvyc~~g---~~s~~~~~~l~~~--~v~~ 97 (126)
++|+|+|+.| ..+-.+|++|... +|.+
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v 117 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQVIL 117 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 5799999876 4566777777776 4443
No 158
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=33.67 E-value=44 Score=23.44 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=19.6
Q ss_pred CeEEEEeCCC---chHHHHHHHHHhc--Cccee
Q 041947 71 DHIIVVCNSG---GRALRACVDLRNA--HVTKL 98 (126)
Q Consensus 71 ~~ivvyc~~g---~~s~~~~~~l~~~--~v~~l 98 (126)
.+|+|+|+.| ..+-.+|++|... +|.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 5799999876 4566777777776 44433
No 159
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=33.16 E-value=61 Score=24.17 Aligned_cols=26 Identities=4% Similarity=-0.130 Sum_probs=18.8
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHHHHhc
Q 041947 68 SKEDHIIVVCNSGG-RALRACVDLRNA 93 (126)
Q Consensus 68 ~~~~~ivvyc~~g~-~s~~~~~~l~~~ 93 (126)
...++++|+|.+|. .|......|.++
T Consensus 396 ~~~~~~~vVC~~GigtS~lL~~~L~~~ 422 (485)
T 3sqn_A 396 AQTMTAYFLFQGEPAWKAFLQQELAAY 422 (485)
T ss_dssp CCSEEEEEECCSCHHHHHHHHHHHHHH
T ss_pred cccceEEEECCCchhHHHHHHHHHHHh
Confidence 45567999999984 566666666666
No 160
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=32.98 E-value=85 Score=19.18 Aligned_cols=16 Identities=25% Similarity=0.372 Sum_probs=11.7
Q ss_pred CCeEEEEeCCCchHHH
Q 041947 70 EDHIIVVCNSGGRALR 85 (126)
Q Consensus 70 ~~~ivvyc~~g~~s~~ 85 (126)
++.|+|.|.++.+...
T Consensus 97 G~dVLVnnAgg~r~~~ 112 (157)
T 3gxh_A 97 GKDVLVHCLANYRASA 112 (157)
T ss_dssp TSCEEEECSBSHHHHH
T ss_pred CCCEEEECCCCCCHHH
Confidence 4489999998765443
No 161
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=32.03 E-value=52 Score=24.65 Aligned_cols=34 Identities=9% Similarity=0.025 Sum_probs=19.3
Q ss_pred CCCeEEEEeCCCch-------HHHHHHHHHhcCcceecccH
Q 041947 69 KEDHIIVVCNSGGR-------ALRACVDLRNAHVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~-------s~~~~~~l~~~~v~~l~gG~ 102 (126)
....|++||++..- +....++|.+.++.++.||-
T Consensus 145 r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~LVtGGG 185 (462)
T 3gh1_A 145 ATPNLVVCWGGHSINEVEYQYTREVGHELGLRELNICTGCG 185 (462)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc
Confidence 56779999997632 22222333333676666654
No 162
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=38.01 E-value=9.8 Score=23.70 Aligned_cols=35 Identities=26% Similarity=0.211 Sum_probs=26.2
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
...+++|||++-..+...+..|... .+..+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGINNCYLEGEMV 65 (170)
Confidence 4567899999887777777777766 6777777764
No 163
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=31.63 E-value=76 Score=21.89 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=28.1
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... ++..+.|++
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 277 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDL 277 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECTTS
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCCC
Confidence 5678999999878888888888777 788888886
No 164
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=31.31 E-value=70 Score=22.59 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=26.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc--Ccceecc
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEG 100 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~g 100 (126)
..+.+++|||.+-..+...+..|... ++..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCCcEEEec
Confidence 46788999999877777777777776 6778888
No 165
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=31.24 E-value=1e+02 Score=19.57 Aligned_cols=53 Identities=21% Similarity=0.233 Sum_probs=30.2
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchH
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRA 83 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s 83 (126)
.+++.+ ..+..++|+-+..+ . .++..| .+...+...+ ...+.-|++|.+|.-.
T Consensus 20 ~i~~~L~~~G~eV~D~G~~~~---~---~~~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~ 75 (162)
T 2vvp_A 20 RIIEHLKQTGHEPIDCGALRY---D---ADDDYP-------------AFCIAAATRTVADPGSLGIVLGGSGNGE 75 (162)
T ss_dssp HHHHHHHHTTCEEEECSCCSC---C---TTCCHH-------------HHHHHHHHHHHHSTTCEEEEEESSSHHH
T ss_pred HHHHHHHHCCCEEEEeCCCCC---C---CCCChH-------------HHHHHHHHHHHcCCCceEEEEeCCcHHH
Confidence 344555 67889999976321 0 122222 3444444443 3556789999998533
No 166
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=31.24 E-value=77 Score=21.57 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=28.2
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
....+++|||++-..+...+..|.+. ++..+.|++
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 272 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDL 272 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCCCeEEeeCCC
Confidence 46677999999888888888888777 777888876
No 167
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=30.97 E-value=77 Score=20.11 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=27.7
Q ss_pred HHhhcCCCCeEEEEeCCC--chHHHHHHHHHhc------CcceecccHH
Q 041947 63 VASVCSKEDHIIVVCNSG--GRALRACVDLRNA------HVTKLEGGYS 103 (126)
Q Consensus 63 ~~~~~~~~~~ivvyc~~g--~~s~~~~~~l~~~------~v~~l~gG~~ 103 (126)
+...++++..+|+.|..| ..|...|.++.+. ++..+-||-.
T Consensus 67 il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 67 ILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 344457777788888766 4577777777764 5777778754
No 168
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=30.38 E-value=53 Score=22.57 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=27.1
Q ss_pred CeEEEEeCCC---chHHHHHHHHHhc--Cccee-cc---------cHHhHHhCCCCCC
Q 041947 71 DHIIVVCNSG---GRALRACVDLRNA--HVTKL-EG---------GYSAWVDEGVAGD 113 (126)
Q Consensus 71 ~~ivvyc~~g---~~s~~~~~~l~~~--~v~~l-~g---------G~~~w~~~g~~~~ 113 (126)
++|+|+|+.| ..+-.+|++|... +|.++ .+ .+..|.+.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 5899999876 4566777777776 55543 22 1245666666554
No 169
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=30.38 E-value=1.3e+02 Score=20.91 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=51.5
Q ss_pred CCceeCHHHHHHhhhCCcEEE-ecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCC--
Q 041947 4 DVASVGVDTAKDLLSSGHRFL-DVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSG-- 80 (126)
Q Consensus 4 ~~~~i~~~~l~~~~~~~~~ii-DvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g-- 80 (126)
+...|+...+..+...+.++. |.|.........-+++.-+++... ...+....+...+..++.|++.+..|
T Consensus 27 ~~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~~~i~~~~~------~~~~~~~~li~~l~~G~~Va~lsdaGdP 100 (296)
T 3kwp_A 27 NLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITTKQISFHEH------NTQERIPQLIAKLKQGMQIAQVSDAGMP 100 (296)
T ss_dssp CGGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCCEEEECSTT------THHHHHHHHHHHHHTTCEEEEECSSBCT
T ss_pred CccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeeeeeeehhhc------chhhHhHHHHHHHhcCceEEEeccCCCC
Confidence 455677666555557888888 666443322211112222222111 01233334433335678888887434
Q ss_pred ---chHHHHHHHHHhc--CcceecccH---HhHHhCCCCCC
Q 041947 81 ---GRALRACVDLRNA--HVTKLEGGY---SAWVDEGVAGD 113 (126)
Q Consensus 81 ---~~s~~~~~~l~~~--~v~~l~gG~---~~w~~~g~~~~ 113 (126)
.........+.+. .|.++.|=- .+....|+|+.
T Consensus 101 ~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~~ 141 (296)
T 3kwp_A 101 SISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQ 141 (296)
T ss_dssp TSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCCS
T ss_pred CCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCCC
Confidence 2334444555544 555665532 24455677664
No 170
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=30.21 E-value=44 Score=23.35 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=28.3
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|.+. ++..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCeEEEecCCC
Confidence 4578999999888888888888877 788888885
No 171
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=30.00 E-value=1.1e+02 Score=19.73 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHHHHhh-h--CCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchHHH
Q 041947 11 DTAKDLL-S--SGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRALR 85 (126)
Q Consensus 11 ~~l~~~~-~--~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s~~ 85 (126)
+.+++.| . .+..++|+-+..+ .++..| ++...+...+ ...+.-|++|.+|.-.+.
T Consensus 38 ~~i~~~L~~~~~G~eV~D~G~~s~-------~s~DYP-------------d~a~~vA~~V~~g~~d~GIliCGTGiG~sI 97 (179)
T 3k7p_A 38 ENLILYVKEAGDEFVPVYCGPKTA-------ESVDYP-------------DFASRVAEMVARKEVEFGVLAAGSGIGMSI 97 (179)
T ss_dssp HHHHHHHHHTCTTEEEEECSCSSS-------SCCCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEcCCCCC-------CCCCHH-------------HHHHHHHHHHHcCCCCEEEEEccCcHHHhh
Confidence 3455555 5 6788999876431 122222 4445555443 345668999999854433
Q ss_pred H
Q 041947 86 A 86 (126)
Q Consensus 86 ~ 86 (126)
+
T Consensus 98 a 98 (179)
T 3k7p_A 98 A 98 (179)
T ss_dssp H
T ss_pred H
Confidence 3
No 172
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=29.92 E-value=43 Score=24.75 Aligned_cols=48 Identities=19% Similarity=0.282 Sum_probs=31.4
Q ss_pred HHHHHHHhhcCC-CCeEEEEeCCCchHHHHHHHHHhc-----CcceecccHHhH
Q 041947 58 EFLTQVASVCSK-EDHIIVVCNSGGRALRACVDLRNA-----HVTKLEGGYSAW 105 (126)
Q Consensus 58 ~~~~~~~~~~~~-~~~ivvyc~~g~~s~~~~~~l~~~-----~v~~l~gG~~~w 105 (126)
++.+.+....+. .-.-+++|++|..+-..|-.+.+. +|-.+.||+.+|
T Consensus 111 ~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~ 164 (456)
T 4atq_A 111 AVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGR 164 (456)
T ss_dssp HHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCS
T ss_pred HHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCc
Confidence 345555555443 345688899988777666666555 666777887654
No 173
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=29.69 E-value=55 Score=20.96 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=18.4
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHh
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRN 92 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~ 92 (126)
-+++|+|.|.++..+.....++.+
T Consensus 145 GDDTIlVi~r~~~~a~~l~~~l~~ 168 (170)
T 3lap_A 145 GDDTILVVAREPTTGAQLAGMFEN 168 (170)
T ss_dssp CSSEEEEEECTTCCHHHHHHHHHH
T ss_pred cCCEEEEEeCCHHHHHHHHHHHHh
Confidence 568889999888877777776654
No 174
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=29.67 E-value=46 Score=23.13 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=27.7
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 284 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM 284 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5678999999888888888888777 677888875
No 175
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=28.00 E-value=44 Score=23.38 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=27.5
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 292 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARM 292 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTS
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCCeEEecCCC
Confidence 5678999999877888888888776 777888886
No 176
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=26.84 E-value=84 Score=21.96 Aligned_cols=18 Identities=33% Similarity=0.660 Sum_probs=13.1
Q ss_pred CCCCeEEEEeCCC-chHHH
Q 041947 68 SKEDHIIVVCNSG-GRALR 85 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~ 85 (126)
....+|||+|..| +|+..
T Consensus 237 ~~~~PivVHCsaGvGRTGt 255 (315)
T 1wch_A 237 HRSGPIITHCSAGIGRSGT 255 (315)
T ss_dssp CCSSCEEEECSSSSHHHHH
T ss_pred CCCCCEEEEcCCCCcHHHH
Confidence 4578999999877 45544
No 177
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=26.64 E-value=44 Score=23.15 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=26.8
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGY 102 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~ 102 (126)
...+++|||++-..+...+..|... .+..+.|++
T Consensus 27 ~~~~~LVF~~t~~~~~~l~~~L~~~g~~~~~lhg~l 62 (300)
T 3i32_A 27 SPDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDM 62 (300)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHTTTCCEEEECSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4678999999877777777777766 777888885
No 178
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=25.81 E-value=60 Score=22.81 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=27.7
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
...+++|||++-..+...+..|.+. ++..+.|++.
T Consensus 275 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~~~~~h~~~~ 311 (410)
T 2j0s_A 275 TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP 311 (410)
T ss_dssp TSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSC
T ss_pred CCCcEEEEEcCHHHHHHHHHHHHhCCCceEEeeCCCC
Confidence 3457999999877778878888777 7888888863
No 179
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=24.83 E-value=94 Score=23.41 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=28.3
Q ss_pred CCCeEEEEeCCCc---hHHHHHHHHHhc--Ccce--eccc--------HHhHHhCCCCCC
Q 041947 69 KEDHIIVVCNSGG---RALRACVDLRNA--HVTK--LEGG--------YSAWVDEGVAGD 113 (126)
Q Consensus 69 ~~~~ivvyc~~g~---~s~~~~~~l~~~--~v~~--l~gG--------~~~w~~~g~~~~ 113 (126)
..++|+|+|+.|+ ....++++|... +|.+ +... +..|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999998764 456667777766 4443 3221 345777776654
No 180
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=24.73 E-value=1e+02 Score=23.03 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=30.8
Q ss_pred HHHHhhcCCCCeEEEEeCCCc---hHHHHHHHHHhc-Ccceec-c---------cHHhHHhCCCCCC
Q 041947 61 TQVASVCSKEDHIIVVCNSGG---RALRACVDLRNA-HVTKLE-G---------GYSAWVDEGVAGD 113 (126)
Q Consensus 61 ~~~~~~~~~~~~ivvyc~~g~---~s~~~~~~l~~~-~v~~l~-g---------G~~~w~~~g~~~~ 113 (126)
.++...++..++|+|+|+.|+ ..-.++++|... +|.++- + -+..|++.|.++.
T Consensus 37 ~~i~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~~~V~v~~~~~~~~~~a~~~~~~~~~~g~~~~ 103 (475)
T 3k5w_A 37 RAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFRVLVFEMKLTKSPMCQLQKERAKKAGVVIK 103 (475)
T ss_dssp HHHHTTSCTTCEEEEEECSSHHHHHHHHHHHHHBTTBEEEEEESSCCCSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCCeEEEEECCCCCHHHHHHHHHHHHcCCceEEEEeCCCCCHHHHHHHHHHHHCCCcEe
Confidence 334444456788999998764 455666666654 444332 2 1345666666543
No 181
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=24.55 E-value=1.7e+02 Score=20.00 Aligned_cols=108 Identities=9% Similarity=0.021 Sum_probs=50.3
Q ss_pred CceeCHHHHHHhhhCCcEEEecCChhhhcccCCC-CccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCC---
Q 041947 5 VASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVH-GALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSG--- 80 (126)
Q Consensus 5 ~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~-ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g--- 80 (126)
...|+...+..+.+.+.++.|.+...+... +++ ++..+...+.........++....+......++.|++.+.+.
T Consensus 37 p~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~i~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i 115 (294)
T 2ybo_A 37 PGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESCQRIYVGKRCGHHSLPQEEINELLVRLARQQRRVVRLKGGDPFI 115 (294)
T ss_dssp GGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTSEEEECC--------CHHHHHHHHHHHHHTTCCEEEEEEBCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCCeEEecccccccccCCHHHHHHHHHHHHHCCCeEEEEcCCCCCc
Confidence 345565555554477888888875444332 222 222222111100000111233344443334566676665432
Q ss_pred -chHHHHHHHHHhc--CcceecccH---HhHHhCCCCCC
Q 041947 81 -GRALRACVDLRNA--HVTKLEGGY---SAWVDEGVAGD 113 (126)
Q Consensus 81 -~~s~~~~~~l~~~--~v~~l~gG~---~~w~~~g~~~~ 113 (126)
.+.......+.+. .+.++.|=- .+....|.|+.
T Consensus 116 ~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt 154 (294)
T 2ybo_A 116 FGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLT 154 (294)
T ss_dssp SSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSC
T ss_pred cCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcc
Confidence 3445555666555 566765421 23455788774
No 182
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=24.27 E-value=78 Score=20.49 Aligned_cols=25 Identities=8% Similarity=-0.011 Sum_probs=20.5
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA 93 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~ 93 (126)
-+++|+|.|.+...+......+.++
T Consensus 151 GDDTIlVi~r~~~~a~~l~~~l~~l 175 (180)
T 3v4g_A 151 GDDTIFITPTLTITTEQLFKSVCEL 175 (180)
T ss_dssp CSSEEEEEECTTSCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 5789999999998888877777654
No 183
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=23.83 E-value=97 Score=22.56 Aligned_cols=40 Identities=13% Similarity=0.050 Sum_probs=28.8
Q ss_pred HHhhcCCCCeEEEEeCCCchHHHHHHHHHhc---CcceecccH
Q 041947 63 VASVCSKEDHIIVVCNSGGRALRACVDLRNA---HVTKLEGGY 102 (126)
Q Consensus 63 ~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~---~v~~l~gG~ 102 (126)
+......+++++|||..-.........|.+. ++..+.|+.
T Consensus 334 l~~~~~~~~k~lvF~~~~~~~~~l~~~l~~~~~~~~~~~~g~~ 376 (500)
T 1z63_A 334 IEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGEL 376 (500)
T ss_dssp HHHHHTTTCCEEEECSCHHHHHHHHHHHHHHHTCCCCEEETTS
T ss_pred HHHHHccCCcEEEEEehHHHHHHHHHHHHHhhCCCeEEEECCC
Confidence 3333457788999999877766767777653 777888886
No 184
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=23.67 E-value=1.4e+02 Score=18.66 Aligned_cols=52 Identities=13% Similarity=0.195 Sum_probs=31.6
Q ss_pred hHHHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHHhc----Ccc-eecccHHhHHhC
Q 041947 57 PEFLTQVASVCSKEDHIIVVCNSGGRALRACVDLRNA----HVT-KLEGGYSAWVDE 108 (126)
Q Consensus 57 ~~~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~----~v~-~l~gG~~~w~~~ 108 (126)
.++...+......++++++++.+-..-+.+...+.++ +|. +=.-||..++++
T Consensus 40 ~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~ 96 (145)
T 1srv_A 40 RELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKE 96 (145)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHH
Confidence 4666777666677899999998544433433333333 554 444666666554
No 185
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=23.21 E-value=1e+02 Score=21.32 Aligned_cols=19 Identities=32% Similarity=0.576 Sum_probs=13.0
Q ss_pred CCCCeEEEEeCCC-chHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRA 86 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~ 86 (126)
....+|||+|..| +|+...
T Consensus 220 ~~~~PivVHCsaGvGRTGtf 239 (306)
T 3m4u_A 220 VTTSPILVHCSAGIGRTGTL 239 (306)
T ss_dssp CCSSCEEEECSSSSHHHHHH
T ss_pred CCCCCEEEEcCCCCcchhee
Confidence 3468999999877 454443
No 186
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=22.52 E-value=64 Score=20.07 Aligned_cols=23 Identities=17% Similarity=0.406 Sum_probs=16.0
Q ss_pred CCCeEEEEeCCCchHHHHHHHHH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLR 91 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~ 91 (126)
-+++|+|.|.+...+......+.
T Consensus 124 GDDTIlvi~r~~~~a~~l~~~l~ 146 (149)
T 1b4a_A 124 GDDTCLIICRTPKDAKKVSNQLL 146 (149)
T ss_dssp CSSEEEEEESSHHHHHHHHHHHH
T ss_pred cCCEEEEEeCCHHHHHHHHHHHH
Confidence 46778888887776666665554
No 187
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=22.48 E-value=1.3e+02 Score=20.95 Aligned_cols=19 Identities=37% Similarity=0.690 Sum_probs=13.5
Q ss_pred CCCeEEEEeCCC-chHHHHH
Q 041947 69 KEDHIIVVCNSG-GRALRAC 87 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~~~ 87 (126)
...+|||+|..| +|+...+
T Consensus 236 ~~~PivVHCsaGvGRTGtfi 255 (320)
T 2i75_A 236 KEEPVVVHCSAGIGRTGVLI 255 (320)
T ss_dssp CCSCEEEECSSSSSHHHHHH
T ss_pred CCCCEEEEcCCCCcHHHHHH
Confidence 468899999876 4555443
No 188
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=22.29 E-value=65 Score=23.90 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=28.6
Q ss_pred HHHHHHHhhcCCCCeEEEEeCCCchHHHHHHHHHhc-----------CcceecccHHh
Q 041947 58 EFLTQVASVCSKEDHIIVVCNSGGRALRACVDLRNA-----------HVTKLEGGYSA 104 (126)
Q Consensus 58 ~~~~~~~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~-----------~v~~l~gG~~~ 104 (126)
++.+.+....+.+-.-|+||++|..+-..|-.+.+. +|-.+.||+.+
T Consensus 115 ~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG 172 (473)
T 4e3q_A 115 MLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHG 172 (473)
T ss_dssp HHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred HHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECC
Confidence 455666666554444588999997766655555331 35566677654
No 189
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=22.14 E-value=1.1e+02 Score=20.81 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=13.8
Q ss_pred CCCCeEEEEeCCC-chHHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRAC 87 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~~ 87 (126)
....+|||+|..| +|+...+
T Consensus 202 ~~~~pivVHCsaGvGRTGtfi 222 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTGTII 222 (284)
T ss_dssp TTCCCEEEESSBSSHHHHHHH
T ss_pred CCCCcEEEEcCCCCcHHHHHH
Confidence 4578999999876 4554433
No 190
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=22.14 E-value=1.9e+02 Score=19.59 Aligned_cols=108 Identities=11% Similarity=0.067 Sum_probs=53.4
Q ss_pred CceeCHHHHHHhhhCCcEEEecCChhhhcccCCC-CccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCC---
Q 041947 5 VASVGVDTAKDLLSSGHRFLDVRTTEEFNESHVH-GALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSG--- 80 (126)
Q Consensus 5 ~~~i~~~~l~~~~~~~~~iiDvR~~~e~~~ghI~-ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g--- 80 (126)
...|+...+..+...+.++.|.+....... +++ ++.-++..+.........++....+......++.|++.+.+.
T Consensus 27 ~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~~~~~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i 105 (280)
T 1s4d_A 27 PGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGAVLEFAGKRGGKPSPKQRDISLRLVELARAGNRVLRLKGGDPFV 105 (280)
T ss_dssp TTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTCCEEECSCCC--CCCCHHHHHHHHHHHHHTTCCEEEEESBCTTS
T ss_pred HHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCCEEEeccccccccccCHHHHHHHHHHHHhCCCeEEEEcCCCCcc
Confidence 345665555555578889998876444332 332 222222211000001112334444444434567777777632
Q ss_pred -chHHHHHHHHHhc--Ccceeccc---HHhHHhCCCCCC
Q 041947 81 -GRALRACVDLRNA--HVTKLEGG---YSAWVDEGVAGD 113 (126)
Q Consensus 81 -~~s~~~~~~l~~~--~v~~l~gG---~~~w~~~g~~~~ 113 (126)
.+.......+.+. .+.++.|= ..+....|.|+.
T Consensus 106 ~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~ 144 (280)
T 1s4d_A 106 FGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVT 144 (280)
T ss_dssp SSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSC
T ss_pred ccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCcc
Confidence 3455556666655 56666542 124455677774
No 191
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=22.01 E-value=1.8e+02 Score=19.34 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=30.6
Q ss_pred HHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchH
Q 041947 12 TAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRA 83 (126)
Q Consensus 12 ~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s 83 (126)
.+++.+ ..+..++|+-. ..+. ..++..| .+...+...+ ...+.-|++|++|.-.
T Consensus 24 ~l~~~L~~~G~eV~D~G~-~~~~----~~~~dYp-------------d~a~~vA~~V~~g~~d~GIliCGTGiG~ 80 (214)
T 3ono_A 24 ELNSVAGGLGHDVFNVGM-TDEN----DHHLTYI-------------HLGIMASILLNSKAVDFVVTGCGTGQGA 80 (214)
T ss_dssp HHHHHHHHTTCEEEECSC-SSTT----SSCCCHH-------------HHHHHHHHHHHTTSCSEEEEEESSSHHH
T ss_pred HHHHHHHHCCCEEEEcCC-CCCC----CCCCCHH-------------HHHHHHHHHHHcCCCCEEEEEcCCcHHH
Confidence 566666 67889999974 1011 0122222 3444444443 3456789999998533
No 192
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=22.01 E-value=85 Score=25.40 Aligned_cols=35 Identities=17% Similarity=0.126 Sum_probs=28.9
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
.+++++|+|.+-..+...+..|.+. ....+.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGIPHQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTCCCEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEeeCCch
Confidence 5789999999988888888888877 6668888853
No 193
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=21.63 E-value=79 Score=18.67 Aligned_cols=22 Identities=23% Similarity=0.179 Sum_probs=13.2
Q ss_pred CeEEEEeCCCchHHHHHHHHHh
Q 041947 71 DHIIVVCNSGGRALRACVDLRN 92 (126)
Q Consensus 71 ~~ivvyc~~g~~s~~~~~~l~~ 92 (126)
+-.|.||....+..++++...+
T Consensus 10 ~V~I~YC~~C~w~lRa~~laqe 31 (108)
T 2ojl_A 10 RIAIQYCTQCQWLLRAAWMAQE 31 (108)
T ss_dssp EEEEEEETTTTCHHHHHHHHHH
T ss_pred EEEEEECCCCCChHHHHHHHHH
Confidence 3468999977655554443333
No 194
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=21.54 E-value=55 Score=22.94 Aligned_cols=35 Identities=9% Similarity=0.167 Sum_probs=24.9
Q ss_pred CCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 69 KEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 69 ~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
...+++|||++-..+...+..|... ++..+.|++.
T Consensus 279 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~~~~~h~~~~ 315 (414)
T 3eiq_A 279 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMD 315 (414)
T ss_dssp CCSSCEEECSCHHHHHHHHHHHHTTTCCCEEC---CH
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHhcCCeEEEecCCCC
Confidence 4567899999877777777777776 7888888864
No 195
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=21.17 E-value=2e+02 Score=19.44 Aligned_cols=56 Identities=11% Similarity=0.178 Sum_probs=29.7
Q ss_pred HHHHHhh-hCCcEEEecCChhhhcccCCCCccccccccccccCCCCChHHHHHHHhhc--CCCCeEEEEeCCCchH
Q 041947 11 DTAKDLL-SSGHRFLDVRTTEEFNESHVHGALNVPYLFITQEGRVKNPEFLTQVASVC--SKEDHIIVVCNSGGRA 83 (126)
Q Consensus 11 ~~l~~~~-~~~~~iiDvR~~~e~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ivvyc~~g~~s 83 (126)
+.+++.+ ..+..++|+-+...-.. .++..| .+...+...+ ...+.-|++|++|.-.
T Consensus 39 e~i~~~L~~~G~eV~D~G~~s~~d~----~svDYP-------------d~a~~vA~~V~~g~~d~GIliCGTGiG~ 97 (231)
T 3c5y_A 39 EALTTVAEPLGHKVFNYGMYTAEDK----ASLTYV-------------MNGLLAGILLNSGAADFVVTGCGTGMGS 97 (231)
T ss_dssp HHHHHHHGGGTCEEEECCCCSTTCS----SCCCHH-------------HHHHHHHHHHHHTSCSEEEEEESSSHHH
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCC----CCCChH-------------HHHHHHHHHHHcCCCCeEEEEcCCcHHH
Confidence 3445555 56788888865221000 111222 3444444443 3556789999998533
No 196
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=21.09 E-value=1.4e+02 Score=20.54 Aligned_cols=19 Identities=26% Similarity=0.504 Sum_probs=13.3
Q ss_pred CCCeEEEEeCCC-chHHHHH
Q 041947 69 KEDHIIVVCNSG-GRALRAC 87 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~~~ 87 (126)
...+|||+|..| +|+...+
T Consensus 218 ~~~PivVHCsaGvGRTGtfi 237 (302)
T 4az1_A 218 TTVPVVVHCSAGIGRTGTLI 237 (302)
T ss_dssp TTSCEEEESSSSSSHHHHHH
T ss_pred CCCCEEEECCCCCcHHHHHH
Confidence 567999999866 4554433
No 197
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=21.06 E-value=1.3e+02 Score=20.47 Aligned_cols=17 Identities=35% Similarity=0.669 Sum_probs=12.4
Q ss_pred CCCeEEEEeCCC-chHHH
Q 041947 69 KEDHIIVVCNSG-GRALR 85 (126)
Q Consensus 69 ~~~~ivvyc~~g-~~s~~ 85 (126)
...+|||+|..| +|+..
T Consensus 211 ~~~PivVHCsaGvGRTGt 228 (286)
T 2ooq_A 211 EAGPIVVHCSAGAGRTGC 228 (286)
T ss_dssp TSCCEEEECSSSSHHHHH
T ss_pred CCCcEEEEeCCCCcHHHH
Confidence 567899999877 45444
No 198
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=21.01 E-value=1.4e+02 Score=20.33 Aligned_cols=19 Identities=32% Similarity=0.433 Sum_probs=13.4
Q ss_pred CCCCeEEEEeCCC-chHHHH
Q 041947 68 SKEDHIIVVCNSG-GRALRA 86 (126)
Q Consensus 68 ~~~~~ivvyc~~g-~~s~~~ 86 (126)
....+|||+|..| +|+...
T Consensus 204 ~~~~PivVHCsaGvGRTGtf 223 (288)
T 4grz_A 204 PHAGPIIVHSSAGIGRTGTI 223 (288)
T ss_dssp TTCCCEEEECSSSSHHHHHH
T ss_pred CCCCcEEEEeCCCCcHHHHH
Confidence 4578999999877 454443
No 199
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=20.79 E-value=1.3e+02 Score=17.30 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=41.1
Q ss_pred CceeCHHHHHHhhhCCcEEE-ecCChhhhcc-cCCCCccccccccccccCCCCChHHHHHHHhhcCCCCeEEEEeCCC--
Q 041947 5 VASVGVDTAKDLLSSGHRFL-DVRTTEEFNE-SHVHGALNVPYLFITQEGRVKNPEFLTQVASVCSKEDHIIVVCNSG-- 80 (126)
Q Consensus 5 ~~~i~~~~l~~~~~~~~~ii-DvR~~~e~~~-ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivvyc~~g-- 80 (126)
...|+...+..+.+.+.++. |.+...++.. -.+++..-+.+... ...+....+......++.|++.++.|
T Consensus 18 ~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~~G~~V~~l~d~GdP 91 (117)
T 3hh1_A 18 LDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSF------NEERAVRQVIELLEEGSDVALVTDAGTP 91 (117)
T ss_dssp GGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECCST------THHHHHHHHHHHHHTTCCEEEEEETTSC
T ss_pred HHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccCCc------cHHHHHHHHHHHHHCCCeEEEEecCCcC
Confidence 34566655555447777776 4443333322 12443322222111 11233333333335677788888323
Q ss_pred ---chHHHHHHHHHhc--Ccceecc
Q 041947 81 ---GRALRACVDLRNA--HVTKLEG 100 (126)
Q Consensus 81 ---~~s~~~~~~l~~~--~v~~l~g 100 (126)
.........+.+. .|.++.|
T Consensus 92 ~i~~~~~~l~~~~~~~gi~v~viPG 116 (117)
T 3hh1_A 92 AISDPGYTMASAAHAAGLPVVPVPG 116 (117)
T ss_dssp GGGSTTHHHHHHHHHTTCCEEEEC-
T ss_pred eEeccHHHHHHHHHHCCCcEEEeCC
Confidence 2334444554444 5555554
No 200
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=20.75 E-value=85 Score=18.51 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=12.7
Q ss_pred EEEEeCCCchHHHHHHHHHhc
Q 041947 73 IIVVCNSGGRALRACVDLRNA 93 (126)
Q Consensus 73 ivvyc~~g~~s~~~~~~l~~~ 93 (126)
.|.||....+..++++....+
T Consensus 16 ~I~YC~~C~w~lRa~~laqeL 36 (107)
T 3dex_A 16 QIEYCTQCRWLPRAAWLAQEL 36 (107)
T ss_dssp EEEEETTTTCHHHHHHHHHHH
T ss_pred EEEECCCCCChHHHHHHHHHH
Confidence 478999876555544444433
No 201
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=20.66 E-value=1.4e+02 Score=22.12 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=27.6
Q ss_pred CCCCeEEEEeCCCchHHHHHHHHHhc-----CcceecccH
Q 041947 68 SKEDHIIVVCNSGGRALRACVDLRNA-----HVTKLEGGY 102 (126)
Q Consensus 68 ~~~~~ivvyc~~g~~s~~~~~~l~~~-----~v~~l~gG~ 102 (126)
.....++|||.+-..+...+..|... .+..+.|++
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~~v~~~h~~~ 376 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKI 376 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTSCEEEESTTS
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCceEEEecCCC
Confidence 46778999999887787878887764 566788886
No 202
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=20.09 E-value=1.4e+02 Score=23.56 Aligned_cols=40 Identities=8% Similarity=0.022 Sum_probs=28.1
Q ss_pred HhhcCCCCeEEEEeCCCchHHHHHHHHHhc--CcceecccHH
Q 041947 64 ASVCSKEDHIIVVCNSGGRALRACVDLRNA--HVTKLEGGYS 103 (126)
Q Consensus 64 ~~~~~~~~~ivvyc~~g~~s~~~~~~l~~~--~v~~l~gG~~ 103 (126)
......+++++|||..-.........|... .+..+.|+..
T Consensus 566 ~~~~~~g~kvLIFsq~~~~ld~L~~~L~~~g~~~~~i~G~~~ 607 (800)
T 3mwy_W 566 TRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVP 607 (800)
T ss_dssp HHHTTTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEESTTSC
T ss_pred HHHhhCCCeEEEEechHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 333457789999999766666666666555 7778888863
Done!