BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041950
(307 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q44|A Chain A, Crystal Structure Of An Arabidopsis Thaliana Putative
Steroid Sulfotransferase
pdb|2Q3M|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of An
Arabidopsis Thaliana Putative Steroid Sulphotransferase
Length = 326
Score = 250 bits (639), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 192/306 (62%), Gaps = 13/306 (4%)
Query: 1 LVASLPKGKGWMTEHLVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWL 60
L++SLPK KGW+ + ++G W T L+G++ Q F+A+ +DI L T PK GTTWL
Sbjct: 23 LISSLPKEKGWLVSEIYEFQGLWHTQ-AILQGILICQKRFEAKDSDIILVTNPKSGTTWL 81
Query: 61 KALIFATMNRSRYDFPS---HPLLSASPHDCVPFLDAYIFQNNPVSSIHSLPSPRLFATH 117
KAL+FA +NR ++ S HPLL +PH VPFL+ ++ +P SLPSPRL TH
Sbjct: 82 KALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEG-VYYESPDFDFSSLPSPRLMNTH 140
Query: 118 IPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVS 177
I + LP S+ SS + VY CRNPKD+ VS W F K P+E +E A E FC+G
Sbjct: 141 ISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEGKF 200
Query: 178 HYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVV 237
GPFWDH+L YW AS E+P K+LF+ YEE+ ++ V +KR+AEFL F EE V
Sbjct: 201 IGGPFWDHILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECGFIEEE----EV 256
Query: 238 HEIIRLCSFENLSSLEVNKTKVKRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQI 297
EI++LCSFE+LS+LEVNK + N I+ FFRKG +G W + L++ + E +D+
Sbjct: 257 REIVKLCSFESLSNLEVNKE--GKLPNG--IETKTFFRKGEIGGWRDTLSESLAEEIDRT 312
Query: 298 TEEKLE 303
EEK +
Sbjct: 313 IEEKFK 318
>pdb|2AD1|A Chain A, Human Sulfotransferase Sult1c2
pdb|2GWH|A Chain A, Human Sulfotranferase Sult1c2 In Complex With Pap And
Pentachlorophenol
pdb|2GWH|B Chain B, Human Sulfotranferase Sult1c2 In Complex With Pap And
Pentachlorophenol
Length = 298
Score = 147 bits (371), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 149/271 (54%), Gaps = 26/271 (9%)
Query: 39 HFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQ 98
+F+A+P D+ ++T+PK GTTW + ++ N + A H PFL+ I
Sbjct: 36 NFQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSK----RAPTHQRFPFLEMKIPS 91
Query: 99 -NNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MNKA 155
+ + H++PSPR+ TH+P+ LLP S++ + +Y+ RNPKD +VS + F MNKA
Sbjct: 92 LGSGLEQAHAMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKA 151
Query: 156 RPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVL 215
P P + E+ FE F G +G + +HV G+W+A + +IL+L YE+M + P
Sbjct: 152 LP---APGTWEEYFETFLAGKVCWGSWHEHVKGWWEA--KDKHRILYLFYEDMKKNPKHE 206
Query: 216 LKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSN--QLVIDN--C 271
+++LAEF+G+ D V+ +I+ SF+ + + + +S+ ++D+
Sbjct: 207 IQKLAEFIGKKL-----DDKVLDKIVHYTSFDVMK-----QNPMANYSSIPAEIMDHSIS 256
Query: 272 DFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
F RKG VGDW+ H T ER D+ ++K+
Sbjct: 257 PFMRKGAVGDWKKHFTVAQNERFDEDYKKKM 287
>pdb|3BFX|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
pdb|3BFX|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
Length = 296
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 143/269 (53%), Gaps = 22/269 (8%)
Query: 40 FKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLD-AYIFQ 98
F+A+P D+ + T+PK GTTW++ ++ + ++ PF++ A Q
Sbjct: 35 FEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRH----PFIEWARPPQ 90
Query: 99 NNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MNKAR 156
+ V ++PSPR+ TH+ LLP S + +F+Y+ RN KD +VS + F MN
Sbjct: 91 PSGVEKAKAMPSPRILKTHLSTQLLPPSFWENNCKFLYVARNAKDCMVSYYHFQRMNHML 150
Query: 157 PKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVLL 216
P P + E+ FE F G +G ++DHV G+W+ ++ +ILFL YE++ R+P +
Sbjct: 151 PD---PGTWEEYFETFINGKVVWGSWFDHVKGWWE--MKDRHQILFLFYEDIKRDPKHEI 205
Query: 217 KRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVIDN--CDFF 274
+++ +F+G+ + V+ +I++ SFE + N + ++ ++D F
Sbjct: 206 RKVMQFMGKKV-----DETVLDKIVQETSFEKMKE---NPMTNRSTVSKSILDQSISSFM 257
Query: 275 RKGRVGDWENHLTKEMTERLDQITEEKLE 303
RKG VGDW+NH T ER D+I K+E
Sbjct: 258 RKGTVGDWKNHFTVAQNERFDEIYRRKME 286
>pdb|3F3Y|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|C Chain C, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|D Chain D, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
Length = 285
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 149/293 (50%), Gaps = 21/293 (7%)
Query: 12 MTEHLVYYKGCWLTAYG-ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNR 70
M++ ++++G G + L ++D F + D+ + T+PK GT WL ++ ++
Sbjct: 1 MSDDFLWFEGIAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSK 60
Query: 71 SRYDF-PSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMIS 129
+ S P+ SP ++ +++ SPRLF++H+P L P S S
Sbjct: 61 GDAKWIQSVPIWERSP---------WVESEIGYTALSETESPRLFSSHLPIQLFPKSFFS 111
Query: 130 SGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
S ++ +Y+ RNP+DVLVS + F + + P S E+ FE FC+G YG ++DH+ G+
Sbjct: 112 SKAKVIYLMRNPRDVLVSGYFFWKNMKFIK-KPKSWEEYFEWFCQGTVLYGSWFDHIHGW 170
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
+ + L L YEE+ ++ ++++ +FLG+ EE ++ I++ SF+++
Sbjct: 171 --MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEE-----LNLILKNSSFQSM 223
Query: 250 SSLEVNKTKVKRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E + S V+D RKG GDW+NH T E D++ +EK+
Sbjct: 224 K--ENKMSNYSLLSVDYVVDKAQLLRKGVSGDWKNHFTVAQAEDFDKLFQEKM 274
>pdb|1EFH|A Chain A, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
pdb|1EFH|B Chain B, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
Length = 292
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 149/293 (50%), Gaps = 21/293 (7%)
Query: 12 MTEHLVYYKGCWLTAYG-ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNR 70
M++ ++++G G + L ++D F + D+ + T+PK GT WL ++ ++
Sbjct: 1 MSDDFLWFEGIAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSK 60
Query: 71 SRYDF-PSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMIS 129
+ S P+ SP ++ +++ SPRLF++H+P L P S S
Sbjct: 61 GDAKWIQSVPIWERSP---------WVESEIGYTALSETESPRLFSSHLPIQLFPKSFFS 111
Query: 130 SGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
S ++ +Y+ RNP+DVLVS + F + + P S E+ FE FC+G YG ++DH+ G+
Sbjct: 112 SKAKVIYLMRNPRDVLVSGYFFWKNMKFIK-KPKSWEEYFEWFCQGTVLYGSWFDHIHGW 170
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
+ + L L YEE+ ++ ++++ +FLG+ EE ++ I++ SF+++
Sbjct: 171 --MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEE-----LNLILKNSSFQSM 223
Query: 250 SSLEVNKTKVKRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E + S V+D RKG GDW+NH T E D++ +EK+
Sbjct: 224 K--ENKMSNYSLLSVDYVVDKAQLLRKGVSGDWKNHFTVAQAEDFDKLFQEKM 274
>pdb|4IFB|A Chain A, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
pdb|4IFB|B Chain B, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
Length = 285
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 149/293 (50%), Gaps = 21/293 (7%)
Query: 12 MTEHLVYYKGCWLTAYG-ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNR 70
M++ ++++G G + L ++D F + D+ + T+PK GT WL ++ ++
Sbjct: 1 MSDDFLWFEGIAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSK 60
Query: 71 SRYDF-PSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMIS 129
+ S P+ SP ++ +++ SPRLF++H+P L P S S
Sbjct: 61 GDAKWIQSVPIWERSP---------WVESEIGYTALSETESPRLFSSHLPIQLFPKSFFS 111
Query: 130 SGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
S ++ +Y+ RNP+DVLVS + F + + P S E+ FE FC+G YG ++DH+ G+
Sbjct: 112 SKAKVIYLMRNPRDVLVSGYFFWKNMKFIK-KPKSWEEYFEWFCQGTVLYGSWFDHIHGW 170
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
+ + L L YEE+ ++ ++++ +FLG+ EE ++ I++ SF+++
Sbjct: 171 --MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEE-----LNLILKNSSFQSM 223
Query: 250 SSLEVNKTKVKRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E + S V+D RKG GDW+NH T E D++ +EK+
Sbjct: 224 K--ENKMSNYSGGSVDYVVDKAQLLRKGVSGDWKNHFTVAQAEDFDKLFQEKM 274
>pdb|1OV4|A Chain A, Crystal Structure Of Human Dhea-st Complexed With
Androsterone
Length = 293
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 21/301 (6%)
Query: 4 SLPKGKGWMTEHLVYYKGCWLTAYG-ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKA 62
+P+ ++ ++++G G + L ++D F + D+ + T+PK GT WL
Sbjct: 1 GIPRNSRVDSDDFLWFEGIAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSGTNWLAE 60
Query: 63 LIFATMNRSRYDF-PSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYD 121
++ ++ + S P+ SP ++ +++ SPRLF++H+P
Sbjct: 61 ILCLMHSKGDAKWIQSVPIWERSP---------WVESEIGYTALSETESPRLFSSHLPIQ 111
Query: 122 LLPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVSHYGP 181
L P S SS ++ +Y+ RNP+DVLVS + F + + P S E+ FE FC+G YG
Sbjct: 112 LFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFIK-KPKSWEEYFEWFCQGTVLYGS 170
Query: 182 FWDHVLGYWKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEII 241
++DH+ G+ + + L L YEE+ ++ ++++ +FLG+ EE ++ I+
Sbjct: 171 WFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEE-----LNLIL 223
Query: 242 RLCSFENLSSLEVNKTKVKRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEK 301
+ SF+++ E + S V+D RKG GDW+NH T E D++ +EK
Sbjct: 224 KNSSFQSMK--ENKMSNYSLLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAEDFDKLFQEK 281
Query: 302 L 302
+
Sbjct: 282 M 282
>pdb|1J99|A Chain A, Crystal Structure Of Human Dehydroepiandrosterone
Sulfotransferase In Complex With Substrate
Length = 293
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 21/301 (6%)
Query: 4 SLPKGKGWMTEHLVYYKGCWLTAYG-ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKA 62
+P+ ++ ++++G G + L ++D F + D+ + T+PK GT WL
Sbjct: 1 GIPRNSRVDSDDFLWFEGIAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSGTNWLAE 60
Query: 63 LIFATMNRSRYDF-PSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYD 121
++ ++ + S P+ SP ++ +++ SPRLF++H+P
Sbjct: 61 ILCLMHSKGDAKWIQSVPIWERSP---------WVESEIGYTALSETESPRLFSSHLPIQ 111
Query: 122 LLPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVSHYGP 181
L P S SS ++ +Y+ RNP+DVLVS + F + + P S E+ FE FC+G YG
Sbjct: 112 LFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFLK-KPKSWEEYFEWFCQGTVLYGS 170
Query: 182 FWDHVLGYWKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEII 241
++DH+ G+ + + L L YEE+ ++ ++++ +FLG+ EE ++ I+
Sbjct: 171 WFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEE-----LNLIL 223
Query: 242 RLCSFENLSSLEVNKTKVKRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEK 301
+ SF+++ E + S V+D RKG GDW+NH T E D++ +EK
Sbjct: 224 KNSSFQSMK--ENKMSNYSLLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAEDFDKLFQEK 281
Query: 302 L 302
+
Sbjct: 282 M 282
>pdb|2QP3|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 138/268 (51%), Gaps = 20/268 (7%)
Query: 36 IQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF-PSHPLLSASPHDCVPFLDA 94
++D F + D+ + T+PK GT WL ++ ++ + S P+ SP
Sbjct: 25 VRDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSP--------- 75
Query: 95 YIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVFMNK 154
++ +++ SPRLF++H+P L P S SS ++ +Y+ RNP+DVLVS + F
Sbjct: 76 WVESEIGYTALSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKN 135
Query: 155 ARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFV 214
+ + P S E+ FE FC+G YG ++DH+ G+ + + L L YEE+ ++
Sbjct: 136 IKFIK-KPKSWEEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGR 192
Query: 215 LLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVIDNCDFF 274
++++ +FLG+ EE ++ I++ SF+++ E + S V+D
Sbjct: 193 TIEKICQFLGKTLEPEE-----LNLILKNSSFQSMK--ENKMSNYSLLSVDYVVDKTQLL 245
Query: 275 RKGRVGDWENHLTKEMTERLDQITEEKL 302
RKG GDW+NH T E D++ +EK+
Sbjct: 246 RKGVSGDWKNHFTVAQAEDFDKLFQEKM 273
>pdb|2QP4|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 138/268 (51%), Gaps = 20/268 (7%)
Query: 36 IQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF-PSHPLLSASPHDCVPFLDA 94
++D F + D+ + T+PK GT WL ++ ++ + S P+ SP
Sbjct: 25 VRDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSP--------- 75
Query: 95 YIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVFMNK 154
++ +++ SPRLF++H+P L P S SS ++ +Y+ RNP+DVLVS + F
Sbjct: 76 WVESEIGYTALSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKN 135
Query: 155 ARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFV 214
+ + P S E+ FE FC+G YG ++DH+ G+ + + L L YEE+ ++
Sbjct: 136 WKFIK-KPKSWEEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGR 192
Query: 215 LLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVIDNCDFF 274
++++ +FLG+ EE ++ I++ SF+++ E + S V+D
Sbjct: 193 TIEKICQFLGKTLEPEE-----LNLILKNSSFQSMK--ENKMSNYSLLSVDYVVDKTQLL 245
Query: 275 RKGRVGDWENHLTKEMTERLDQITEEKL 302
RKG GDW+NH T E D++ +EK+
Sbjct: 246 RKGVSGDWKNHFTVAQAEDFDKLFQEKM 273
>pdb|3CKL|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult1b1 In Complex With Pap And Resveratrol
pdb|3CKL|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult1b1 In Complex With Pap And Resveratrol
Length = 298
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 38 DHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYI- 96
+ F ++P DI +AT+PK GTTW+ +I +N + ++ + VP L+ +
Sbjct: 34 EQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFIT----EKVPMLEMTLP 89
Query: 97 -FQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MN 153
+ + + + PSPR+ TH+P DLLP S + + +Y+ RN KDV VS + F MN
Sbjct: 90 GLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMN 149
Query: 154 KARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPF 213
+P P + E+ E F G YG ++ HV +WK E P ILFL YE+M P
Sbjct: 150 NLQPF---PGTWEEYLEKFLTGKVAYGSWFTHVKNWWKKKEEHP--ILFLYYEDMKENPK 204
Query: 214 VLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLE-VNKTKVKRFSNQLVIDNCD 272
+K++ FL + +D ++ II SFE + VN T + V+D+
Sbjct: 205 EEIKKIIRFLEKNL-----NDEILDRIIHHTSFEVMKDNPLVNYTHLP----TTVMDHSK 255
Query: 273 --FFRKGRVGDWENHLTKEMTERLDQITEEKL 302
F RKG GDW+N+ T E+ D I E ++
Sbjct: 256 SPFMRKGTAGDWKNYFTVAQNEKFDAIYETEM 287
>pdb|2Z5F|A Chain A, Human Sulfotransferase Sult1b1 In Complex With Pap
pdb|2Z5F|B Chain B, Human Sulfotransferase Sult1b1 In Complex With Pap
Length = 298
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 38 DHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYI- 96
+ F ++P DI +AT+PK GTTW+ +I +N + ++ + VP L+ +
Sbjct: 34 EQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFIT----EKVPMLEMTLP 89
Query: 97 -FQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MN 153
+ + + + PSPR+ TH+P DLLP S + + +Y+ RN KDV VS + F MN
Sbjct: 90 GLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMN 149
Query: 154 KARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPF 213
+P P + E+ E F G YG ++ HV +WK E P ILFL YE+M P
Sbjct: 150 NLQPF---PGTWEEYLEKFLTGKVAYGSWFTHVKNWWKRKEEHP--ILFLYYEDMKENPK 204
Query: 214 VLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLE-VNKTKVKRFSNQLVIDNCD 272
+K++ FL + +D ++ II SFE + VN T + V+D+
Sbjct: 205 EEIKKIIRFLEKNL-----NDEILDRIIHHTSFEVMKDNPLVNYTHLP----TTVMDHSK 255
Query: 273 --FFRKGRVGDWENHLTKEMTERLDQITEEKL 302
F RKG GDW+N+ T E+ D I E ++
Sbjct: 256 SPFMRKGTAGDWKNYFTVAQNEKFDAIYETEM 287
>pdb|2ZPT|X Chain X, Crystal Structure Of Mouse Sulfotransferase Sult1d1
Complex With Pap
pdb|2ZVP|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And P-Nitrophenol
pdb|2ZVQ|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And Alpha-naphthol
pdb|2ZYT|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Paps
pdb|2ZYU|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Paps And P-Nitrophenyl Sulfate
pdb|2ZYV|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With PapsPAP AND P-Nitrophenol
pdb|2ZYW|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And P-Nitrophenol, Obtained By
Two-Step Soaking Method
Length = 295
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 144/273 (52%), Gaps = 26/273 (9%)
Query: 38 DHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYI- 96
+ F+A+P DI ++T+PK GTTW+ ++ N + + + VPF++ I
Sbjct: 32 ESFEARPDDILISTYPKSGTTWVSEILDLIYNNGD----AEKCKRDAIYKRVPFMELIIP 87
Query: 97 FQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MNK 154
N V ++++PSPR+ TH+P LLP+S + + +Y+ RN KDV+VS + F M K
Sbjct: 88 GITNGVEMLNNMPSPRIVKTHLPVQLLPSSFWKNDCKIIYVARNAKDVVVSYYYFYQMAK 147
Query: 155 ARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFV 214
P+ P + E+ E F G +GP++DHV +W+ E +IL+L YE+M P
Sbjct: 148 IHPE---PGTWEEFLEKFMAGQVSFGPWYDHVKSWWEKRKEY--RILYLFYEDMKENPKC 202
Query: 215 LLKRLAEFLGQPFSLEEESDGVVHEIIRLCSF----ENLSSLEVNKTKVKRFSNQLVIDN 270
++++ +FL + E ++++I+ SF EN S+ N T + + ++
Sbjct: 203 EIQKILKFLEKDIPEE-----ILNKILYHSSFSVMKENPSA---NYTTMMK--EEMDHSV 252
Query: 271 CDFFRKGRVGDWENHLTKEMTERLDQITEEKLE 303
F RKG GDW+N T E+ ++ +K+E
Sbjct: 253 SPFMRKGISGDWKNQFTVAQYEKFEEDYVKKME 285
>pdb|1AQU|A Chain A, Estrogen Sulfotransferase With Bound Inactive Cofactor Pap
And 17-Beta Estradiol
pdb|1AQU|B Chain B, Estrogen Sulfotransferase With Bound Inactive Cofactor Pap
And 17-Beta Estradiol
pdb|1AQY|A Chain A, Estrogen Sulfotransferase With Pap
pdb|1AQY|B Chain B, Estrogen Sulfotransferase With Pap
pdb|1BO6|A Chain A, Estrogen Sulfotransferase With Inactive Cofactor Pap And
Vanadate
pdb|1BO6|B Chain B, Estrogen Sulfotransferase With Inactive Cofactor Pap And
Vanadate
Length = 297
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 140/277 (50%), Gaps = 34/277 (12%)
Query: 38 DHFKAQPTDIFLATFPKCGTTWLKALIF-----ATMNRSRYD--FPSHPLLSASPHDCVP 90
+ F A+P D+ +AT+PK GTTW+ +++ + + + D F P L D +
Sbjct: 34 EMFLARPDDLVIATYPKSGTTWISEVVYMIYKEGDVEKCKEDAIFNRIPYLECRNEDLI- 92
Query: 91 FLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWV 150
N + + SPR+ TH+P LLP S + +Y+CRN KDV VS +
Sbjct: 93 ---------NGIKQLKEKESPRIVKTHLPPKLLPASFWEKNCKMIYLCRNAKDVAVSYYY 143
Query: 151 F--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEM 208
F M + P P S + E F +G YG ++DHV +W+ S S ++LF+ YE+M
Sbjct: 144 FLLMITSYPN---PKSFSEFVEKFMQGQVPYGSWYDHVKAWWEKSKNS--RVLFMFYEDM 198
Query: 209 MREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL-SSLEVNKTKV-KRFSNQL 266
+ + +L EFL + S E +V II+ SF+ + ++ N T + + NQ
Sbjct: 199 KEDIRREVVKLIEFLERKPSAE-----LVDRIIQHTSFQEMKNNPSTNYTMMPEEMMNQK 253
Query: 267 VIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKLE 303
V F RKG +GDW+NH + + ER D+ +++++
Sbjct: 254 V---SPFMRKGIIGDWKNHFPEALRERFDEHYKQQMK 287
>pdb|1CJM|A Chain A, Human Sult1a3 With Sulfate Bound
pdb|2A3R|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1a3 In
Complex With Dopamine And 3-Phosphoadenosine 5-Phosphate
pdb|2A3R|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1a3 In
Complex With Dopamine And 3-Phosphoadenosine 5-Phosphate
Length = 295
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 36/298 (12%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ + T+PK GTTW+ ++ +
Sbjct: 12 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLINTYPKSGTTWVSQILDMIYQGGDLEK 69
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNP-----VSSIHSLPSPRLFATHIPYDLLPNSMISS 130
+ A + VPFL+ N+P + ++ P PRL +H+P LLP +++
Sbjct: 70 CNR----APIYVRVPFLEV----NDPGEPSGLETLKDTPPPRLIKSHLPLALLPQTLLDQ 121
Query: 131 GSRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLG 188
+ VY+ RNPKDV VS + F M KA P+ P + + E F G YG ++ HV
Sbjct: 122 KVKVVYVARNPKDVAVSYYHFHRMEKAHPE---PGTWDSFLEKFMAGEVSYGSWYQHVQE 178
Query: 189 YWKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFEN 248
+W+ S P +L+L YE+M P ++++ EF+G+ SL EE+ + +++ SF+
Sbjct: 179 WWELSRTHP--VLYLFYEDMKENPKREIQKILEFVGR--SLPEET---MDFMVQHTSFK- 230
Query: 249 LSSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q ++D+ F RKG GDW+ T ER D EK+
Sbjct: 231 ----EMKKNPMTNYTTVPQELMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 284
>pdb|1Z29|A Chain A, Crystal Structures Of Sult1a2 And Sult1a13: Implications
In The Bioactivation Of N-Hydroxy-2-Acetylamino Fluorine
(Oh-Aaf)
Length = 295
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 24/292 (8%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 12 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 68
Query: 76 PSHPLLSASPHDCVPFLDAYIFQ-NNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRF 134
A VPFL+ + + + ++ + P+PRL TH+P LLP +++ +
Sbjct: 69 ---KCHRAPIFMRVPFLEFKVPGIPSGMETLKNTPAPRLLKTHLPLALLPQTLLDQKVKV 125
Query: 135 VYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKA 192
VY+ RN KDV VS + F M K P P + E E F G YG ++ HV +W+
Sbjct: 126 VYVARNAKDVAVSYYHFYHMAKVYPH---PGTWESFLEKFMAGEVSYGSWYQHVQEWWEL 182
Query: 193 SLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSL 252
S P +L+L YE+M P ++++ EF+G+ SL EE+ V ++ SF+ +
Sbjct: 183 SRTHP--VLYLFYEDMKENPKREIQKILEFVGR--SLPEET---VDLMVEHTSFKEMKKN 235
Query: 253 EV-NKTKVKR-FSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
+ N T V+R F + + F RKG GDW+ T ER D EK+
Sbjct: 236 PMTNYTTVRREFMDHSI---SPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 284
>pdb|1HY3|A Chain A, Crystal Structure Of Human Estrogen Sulfotransferase V269e
Mutant In The Presence Of Paps
pdb|1HY3|B Chain B, Crystal Structure Of Human Estrogen Sulfotransferase V269e
Mutant In The Presence Of Paps
Length = 294
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 141/270 (52%), Gaps = 24/270 (8%)
Query: 40 FKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQN 99
F+A+P D+ +AT+PK GTTW+ +++ + ++ + +PFL+ +N
Sbjct: 33 FQARPDDLVIATYPKSGTTWVSEIVYMIYKEGDVEKCKEDVI----FNRIPFLECRK-EN 87
Query: 100 --NPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MNKA 155
N V + + SPR+ TH+P +LLP S + +Y+CRN KDV VS + F M
Sbjct: 88 LMNGVKQLDEMNSPRIVKTHLPPELLPASFWEKDCKIIYLCRNAKDVAVSFYYFFLMVAG 147
Query: 156 RPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVL 215
P P S + E F +G YG ++ HV +W+ +SP ++LFL YE++ +
Sbjct: 148 HPN---PGSFPEFVEKFMQGQVPYGSWYKHVKSWWEKG-KSP-RVLFLFYEDLKEDIRKE 202
Query: 216 LKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL-SSLEVNKTKV-KRFSNQLVIDNCDF 273
+ +L FL + + S+ +V II SF+ + ++ N T + NQ + F
Sbjct: 203 VIKLIHFLER-----KPSEELVDRIIHHTSFQEMKNNPSTNYTTLPDEIMNQKL---SPF 254
Query: 274 FRKGRVGDWENHLTKEMTERLDQITEEKLE 303
RKG GDW+NH T+ + E+ D+ E++++
Sbjct: 255 MRKGITGDWKNHFTEALNEKFDKHYEQQMK 284
>pdb|3QVU|A Chain A, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And P-Nitrophenol
pdb|3QVU|B Chain B, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And P-Nitrophenol
pdb|3QVV|A Chain A, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And 3-Cyc
pdb|3QVV|B Chain B, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And 3-Cyc
Length = 295
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 12 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 68
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A + VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 69 ---KCHRAPIFNRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 122
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P P + + E F G YG ++ HV +
Sbjct: 123 VKVVYVARNAKDVAVSYYHFYHMAKVHPD---PGTWDSFLEKFMVGEVCYGSWYQHVQEW 179
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G SL EE+ V +++ SF+
Sbjct: 180 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGH--SLPEET---VDFMVQHTSFK-- 230
Query: 250 SSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q ++D+ F RKG GDW+ T ER D EK+
Sbjct: 231 ---EMKKNPMTNYTTIPQEIMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 284
>pdb|1Z28|A Chain A, Crystal Structures Of Sult1a2 And Sult1a13: Implications
In The Bioactivation Of N-Hydroxy-2-Acetylamino Fluorine
(Oh-Aaf)
Length = 295
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 12 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 68
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 69 ---KCHRAPIFMRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 122
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P+ P + + E F G YG ++ HV +
Sbjct: 123 VKVVYVARNAKDVAVSYYHFYHMAKVHPE---PGTWDSFLEKFMVGEVSYGSWYQHVQEW 179
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G+ SL EE+ V +++ SF+
Sbjct: 180 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGR--SLPEET---VDFVVQHTSFK-- 230
Query: 250 SSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q +D+ F RKG GDW+ T ER D EK+
Sbjct: 231 ---EMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 284
>pdb|1G3M|A Chain A, Crystal Structure Of Human Estrogen Sulfotransferase In
Complex With In-Active Cofactor Pap And 3,5,3',5'-
Tetrachloro-Biphenyl-4,4'-Diol
pdb|1G3M|B Chain B, Crystal Structure Of Human Estrogen Sulfotransferase In
Complex With In-Active Cofactor Pap And 3,5,3',5'-
Tetrachloro-Biphenyl-4,4'-Diol
Length = 294
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 24/270 (8%)
Query: 40 FKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQN 99
F+A+P D+ +AT+PK GTTW+ +++ + ++ + +PFL+ +N
Sbjct: 33 FQARPDDLVIATYPKSGTTWVSEIVYMIYKEGDVEKCKEDVI----FNRIPFLECRK-EN 87
Query: 100 --NPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVF--MNKA 155
N V + + SPR+ TH+P +LLP S + +Y+CRN KDV VS + F M
Sbjct: 88 LMNGVKQLDEMNSPRIVKTHLPPELLPASFWEKDCKIIYLCRNAKDVAVSFYYFFLMVAG 147
Query: 156 RPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVL 215
P P S + E F +G YG ++ HV +W+ +SP ++LFL YE++ +
Sbjct: 148 HPN---PGSFPEFVEKFMQGQVPYGSWYKHVKSWWEKG-KSP-RVLFLFYEDLKEDIRKE 202
Query: 216 LKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL-SSLEVNKTKV-KRFSNQLVIDNCDF 273
+ +L FL + + S+ +V II SF+ + ++ N T + NQ + F
Sbjct: 203 VIKLIHFLER-----KPSEELVDRIIHHTSFQEMKNNPSTNYTTLPDEIMNQKL---SPF 254
Query: 274 FRKGRVGDWENHLTKEMTERLDQITEEKLE 303
RKG GDW+NH T + E+ D+ E++++
Sbjct: 255 MRKGITGDWKNHFTVALNEKFDKHYEQQMK 284
>pdb|4GRA|A Chain A, Crystal Structure Of Sult1a1 Bound With Pap
pdb|4GRA|B Chain B, Crystal Structure Of Sult1a1 Bound With Pap
Length = 299
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 16 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 72
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 73 ---KCHRAPIFMRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 126
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P+ P + + E F G YG ++ HV +
Sbjct: 127 VKVVYVARNAKDVAVSYYHFYHMAKVHPE---PGTWDSFLEKFMVGEVSYGSWYQHVQEW 183
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G+ SL EE+ V +++ SF+
Sbjct: 184 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGR--SLPEET---VDFMVQHTSFK-- 234
Query: 250 SSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q +D+ F RKG GDW+ T ER D EK+
Sbjct: 235 ---EMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 288
>pdb|3U3K|A Chain A, Crystal Structure Of Hsult1a1 Bound To Pap And 2-Naphtol
pdb|3U3K|B Chain B, Crystal Structure Of Hsult1a1 Bound To Pap And 2-Naphtol
pdb|3U3M|A Chain A, Crystal Structure Of Human Sult1a1 Bound To Pap And
3-Cyano-7- Hydroxycoumarin
pdb|3U3O|A Chain A, Crystal Structure Of Human Sult1a1 Bound To Pap And Two
3-Cyano-7- Hydroxycoumarin
Length = 315
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 34/297 (11%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 32 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 88
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 89 ---KCHRAPIFMRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 142
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P+ P + + E F G YG ++ HV +
Sbjct: 143 VKVVYVARNAKDVAVSYYHFYHMAKVHPE---PGTWDSFLEKFMVGEVSYGSWYQHVQEW 199
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G SL EE+ V +++ SF+
Sbjct: 200 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGH--SLPEET---VDFMVQHTSFK-- 250
Query: 250 SSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q +D+ F RKG GDW+ T ER D EK+
Sbjct: 251 ---EMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 304
>pdb|3U3J|A Chain A, Crystal Structure Of Hsult1a1 Bound To Pap
pdb|3U3J|B Chain B, Crystal Structure Of Hsult1a1 Bound To Pap
Length = 314
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 34/297 (11%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 32 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 88
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 89 ---KCHRAPIFMRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 142
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P+ P + + E F G YG ++ HV +
Sbjct: 143 VKVVYVARNAKDVAVSYYHFYHMAKVHPE---PGTWDSFLEKFMVGEVSYGSWYQHVQEW 199
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G SL EE+ V +++ SF+
Sbjct: 200 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGH--SLPEET---VDFMVQHTSFK-- 250
Query: 250 SSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q +D+ F RKG GDW+ T ER D EK+
Sbjct: 251 ---EMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 304
>pdb|1LS6|A Chain A, Human Sult1a1 Complexed With Pap And P-Nitrophenol
pdb|2D06|A Chain A, Human Sult1a1 Complexed With Pap And Estradiol
pdb|2D06|B Chain B, Human Sult1a1 Complexed With Pap And Estradiol
Length = 295
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 34/297 (11%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 12 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 68
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 69 ---KCHRAPIFMRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 122
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P+ P + + E F G YG ++ HV +
Sbjct: 123 VKVVYVARNAKDVAVSYYHFYHMAKVHPE---PGTWDSFLEKFMVGEVSYGSWYQHVQEW 179
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G SL EE+ V +++ SF+
Sbjct: 180 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGH--SLPEET---VDFMVQHTSFK-- 230
Query: 250 SSLEVNKTKVKRFSN--QLVIDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
E+ K + ++ Q +D+ F RKG GDW+ T ER D EK+
Sbjct: 231 ---EMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 284
>pdb|2REO|A Chain A, Crystal Structure Of Human Sulfotransferase 1c3 (Sult1c3)
In Complex With Pap
Length = 305
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 33/275 (12%)
Query: 39 HFKAQPTDIFLATFPKCGTTWLKALIFATMN-------RSRYDFPSHPLLSAS-PHDCVP 90
+F+A+P D+ LAT+PK GTTW+ ++ +N + H L PH P
Sbjct: 42 NFQAKPDDLILATYPKSGTTWMHEILDMILNDGDVEKCKRAQTLDRHAFLELKFPHKEKP 101
Query: 91 FLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWV 150
L+ + + SP+L TH+P L+P S+ + VY+ RNPKD LVS +
Sbjct: 102 DLEFVL----------EMSSPQLIKTHLPSHLIPPSIWKENCKIVYVARNPKDCLVSYYH 151
Query: 151 FMNKARPKELP-PLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMM 209
F A +P P +LE+ +E F G G ++DHV G+W A + +IL+L YE++
Sbjct: 152 FHRMAS--FMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWAA--KDMHRILYLFYEDIK 207
Query: 210 REPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVID 269
++P ++++ +FL + S E ++++II SF+ + + S ++D
Sbjct: 208 KDPKREIEKILKFLEKDISEE-----ILNKIIYHTSFDVMKQNPMTNYTTLPTS---IMD 259
Query: 270 N--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
+ F RKG GDW+N+ T E D+ ++K+
Sbjct: 260 HSISPFMRKGMPGDWKNYFTVAQNEEFDKDYQKKM 294
>pdb|2H8K|A Chain A, Human Sulfotranferase Sult1c3 In Complex With Pap
pdb|2H8K|B Chain B, Human Sulfotranferase Sult1c3 In Complex With Pap
Length = 306
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 33/275 (12%)
Query: 39 HFKAQPTDIFLATFPKCGTTWLKALIFATMN-------RSRYDFPSHPLLSAS-PHDCVP 90
+F+A+P D+ LAT+PK GTTW+ ++ +N + H L PH P
Sbjct: 43 NFQAKPDDLILATYPKSGTTWMHEILDMILNDGDVEKCKRAQTLDRHAFLELKFPHKEKP 102
Query: 91 FLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWV 150
L+ + + SP+L TH+P L+P S+ + VY+ RNPKD LVS +
Sbjct: 103 DLEFVL----------EMSSPQLIKTHLPSHLIPPSIWKENCKIVYVARNPKDCLVSYYH 152
Query: 151 FMNKARPKELP-PLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMM 209
F A +P P +LE+ +E F G G ++DHV G+W A + +IL+L YE++
Sbjct: 153 FHRMAS--FMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWAA--KDMHRILYLFYEDIK 208
Query: 210 REPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVID 269
++P ++++ +FL + S E ++++II SF+ + + S ++D
Sbjct: 209 KDPKREIEKILKFLEKDISEE-----ILNKIIYHTSFDVMKQNPMTNYTTLPTS---IMD 260
Query: 270 N--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
+ F RKG GDW+N+ T E D+ ++K+
Sbjct: 261 HSISPFMRKGMPGDWKNYFTVAQNEEFDKDYQKKM 295
>pdb|3U3R|A Chain A, Crystal Structure Of D249g Mutated Human Sult1a1 Bound To
Pap And P- Nitrophenol
Length = 315
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 144/295 (48%), Gaps = 30/295 (10%)
Query: 16 LVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF 75
L Y KG L Y A + L +Q F+A+P D+ ++T+PK GTTW+ ++ +
Sbjct: 32 LEYVKGVPLIKYFA-EALGPLQS-FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLE- 88
Query: 76 PSHPLLSASPHDCVPFLDAYIFQNNPVSS----IHSLPSPRLFATHIPYDLLPNSMISSG 131
A VPFL+ F+ + S + P+PRL TH+P LLP +++
Sbjct: 89 ---KCHRAPIFMRVPFLE---FKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQK 142
Query: 132 SRFVYICRNPKDVLVSKWVF--MNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGY 189
+ VY+ RN KDV VS + F M K P+ P + + E F G YG ++ HV +
Sbjct: 143 VKVVYVARNAKDVAVSYYHFYHMAKVHPE---PGTWDSFLEKFMVGEVSYGSWYQHVQEW 199
Query: 190 WKASLESPEKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENL 249
W+ S P +L+L YE+M P ++++ EF+G SL EE+ V +++ SF+ +
Sbjct: 200 WELSRTHP--VLYLFYEDMKENPKREIQKILEFVGH--SLPEET---VDFMVQHTSFKEM 252
Query: 250 SSLEV-NKTKV-KRFSNQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
+ N T V + F + F RKG GDW+ T ER D EK+
Sbjct: 253 KKNPMTNYTTVPQEFMGHSI---SPFMRKGMAGDWKTTFTVAQNERFDADYAEKM 304
>pdb|1ZD1|A Chain A, Human Sulfortransferase Sult4a1
pdb|1ZD1|B Chain B, Human Sulfortransferase Sult4a1
Length = 284
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 44/279 (15%)
Query: 31 KGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVP 90
+G M +F +P+D+++ T+PK GT+ L+ +++ + D + + + +P
Sbjct: 32 RGKMEEIANFPVRPSDVWIVTYPKSGTSLLQEVVYLVSQGADPD----EIGLMNIDEQLP 87
Query: 91 FLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKWV 150
L+ + + I L SPRL +H+PY LP+ + + S+ +Y+ RNPKD++VS +
Sbjct: 88 VLE---YPQPGLDIIKELTSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQ 144
Query: 151 FMNKARPKELPPLSLEDAFELFCKGVSH----YGPFWDHVLGYWKASLESPEKILFLKYE 206
F R +S F+ FC+ + YG +++HV +W+ ++S +LFLKYE
Sbjct: 145 FHRSLR-----TMSYRGTFQEFCRRFMNDKLGYGSWFEHVQEFWEHRMDS--NVLFLKYE 197
Query: 207 EMMREPFVLLKRLAEFLG---QPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFS 263
+M R+ ++++LA FLG LE ++ H+++ C N +L V
Sbjct: 198 DMHRDLVTMVEQLARFLGVSCDKAQLEALTEH-CHQLVDQCC--NAEALPVG-------- 246
Query: 264 NQLVIDNCDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
+GRVG W++ T M E+ D + ++K+
Sbjct: 247 ------------RGRVGLWKDIFTVSMNEKFDLVYKQKM 273
>pdb|1Q1Z|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(Sult2b1b) In The Presence Of Pap
pdb|1Q20|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(Sult2b1b) In The Presence Of Pap And Pregnenolone
pdb|1Q22|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(sult2b1b) In The Presence Of Dhea And Pap
Length = 299
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 23/278 (8%)
Query: 29 ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF-PSHPLLSASPHD 87
+L+ + ++ + DIF+ T+PK GTTW+ +I + + S P+ +P
Sbjct: 32 SLESISLAENTQDVRDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVPIWERAPW- 90
Query: 88 CVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVS 147
C + A+ S+ SPRL ++H+P + + SS ++ +Y+ RNP+DV+VS
Sbjct: 91 CETIVGAF--------SLPDQYSPRLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVS 142
Query: 148 KWVFMNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEE 207
+ + +K + P + + F KG +G ++DH+ G+ + ++ + LF+ YEE
Sbjct: 143 LYHY-SKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLR--MKGKDNFLFITYEE 199
Query: 208 MMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLV 267
+ ++ ++R+ FLG+P E V H S+++ N +
Sbjct: 200 LQQDLQGSVERICGFLGRPLGKEALGSVVAH--------STFSAMKANTMSNYTLLPPSL 251
Query: 268 IDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKLE 303
+D+ F RKG GDW+NH T +E D+ +++
Sbjct: 252 LDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRKQMR 289
>pdb|1Q1Q|A Chain A, Crystal Structure Of Human Pregnenolone Sulfotransferase
(Sult2b1a) In The Presence Of Pap
Length = 350
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 23/277 (8%)
Query: 29 ALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALIFATMNRSRYDF-PSHPLLSASPHD 87
+L+ + ++ + DIF+ T+PK GTTW+ +I + + S P+ +P
Sbjct: 30 SLESISLAENTQDVRDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVPIWERAPW- 88
Query: 88 CVPFLDAYIFQNNPVSSIHSLPSPRLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVS 147
C + A+ S+ SPRL ++H+P + + SS ++ +Y+ RNP+DV+VS
Sbjct: 89 CETIVGAF--------SLPDQYSPRLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVS 140
Query: 148 KWVFMNKARPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEE 207
+ + +K + P + + F KG +G ++DH+ G+ + ++ + LF+ YEE
Sbjct: 141 LYHY-SKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLR--MKGKDNFLFITYEE 197
Query: 208 MMREPFVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLV 267
+ ++ ++R+ FLG+P E V H S+++ N +
Sbjct: 198 LQQDLQGSVERICGFLGRPLGKEALGSVVAH--------STFSAMKANTMSNYTLLPPSL 249
Query: 268 IDN--CDFFRKGRVGDWENHLTKEMTERLDQITEEKL 302
+D+ F RKG GDW+NH T +E D+ +++
Sbjct: 250 LDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRKQM 286
>pdb|1FMJ|A Chain A, Crystal Structure Of Mercury Derivative Of Retinol
Dehydratase In A Complex With Retinol And Pap
pdb|1FMJ|B Chain B, Crystal Structure Of Mercury Derivative Of Retinol
Dehydratase In A Complex With Retinol And Pap
pdb|1FML|A Chain A, Crystal Structure Of Retinol Dehydratase In A Complex With
Retinol And Pap
pdb|1FML|B Chain B, Crystal Structure Of Retinol Dehydratase In A Complex With
Retinol And Pap
Length = 351
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 65/330 (19%)
Query: 21 GCWLTAYGAL--KGLMFIQDHFKA---------QPTDIFLATFPKCGTTWLKALIFATMN 69
G + T Y L KG M + + K +PTD+F+A++ + GTT + L++ N
Sbjct: 29 GAFPTTYVKLGPKGYMVYRPYLKDAANIYNMPLRPTDVFVASYQRSGTTMTQELVWLIEN 88
Query: 70 RSRYDFPS----------------HPLLSASPHDCVP---------FLDAYIFQNNPVSS 104
++ P +D +P +L + + P SS
Sbjct: 89 DLNFEAAKTYMSLRYIYLDGFMIYDPEKQEEYNDILPNPENLDMERYLGLLEYSSRPGSS 148
Query: 105 IHSLPSP---RLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKW------VFMNKA 155
+ + P R TH+P L+P +M+ + + VY+ R+P+DV VS + +NK
Sbjct: 149 LLAAVPPTEKRFVKTHLPLSLMPPNMLDT-VKMVYLARDPRDVAVSSFHHARLLYLLNKQ 207
Query: 156 RPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVL 215
+ +D +E+F +G+ P+++HV W A P +LFL YE+ +++
Sbjct: 208 S-------NFKDFWEMFHRGLYTLTPYFEHVKEAW-AKRHDP-NMLFLFYEDYLKDLPGC 258
Query: 216 LKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVI--DNCDF 273
+ R+A+FLG+ S E+ I RLC N + N ++ I D F
Sbjct: 259 IARIADFLGKKLSEEQ--------IQRLCEHLNFEKFKNNGAVNMEDYREIGILADGEHF 310
Query: 274 FRKGRVGDWENHLTKEMTERLDQITEEKLE 303
RKG+ G W ++ +EMT++ ++ ++ L+
Sbjct: 311 IRKGKAGCWRDYFDEEMTKQAEKWIKDNLK 340
>pdb|1X8J|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
Androsterone And Inactive Cofactor Pap
pdb|1X8J|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
Androsterone And Inactive Cofactor Pap
pdb|1X8K|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
Anhydroretinol And Inactive Cofactor Pap
pdb|1X8K|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
Anhydroretinol And Inactive Cofactor Pap
pdb|1X8L|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
All-Trans-4-Oxoretinol And Inactive Cofactor Pap
pdb|1X8L|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
All-Trans-4-Oxoretinol And Inactive Cofactor Pap
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 61/328 (18%)
Query: 21 GCWLTAYGAL--KGLMFIQDHFKA---------QPTDIFLATFPKCGTTWLKALIFATMN 69
G + T Y L KG M + + K +PTD+F+A++ + GTT + L++ N
Sbjct: 29 GAFPTTYVKLGPKGYMVYRPYLKDAANIYNMPLRPTDVFVASYQRSGTTMTQELVWLIEN 88
Query: 70 RSRYDFPS----------------HPLLSASPHDCVP---------FLDAYIFQNNPVSS 104
++ P +D +P +L + + P SS
Sbjct: 89 DLNFEAAKTYMSLRYIYLDGFMIYDPEKQEEYNDILPNPENLDMERYLGLLEYSSRPGSS 148
Query: 105 IHSLPSP---RLFATHIPYDLLPNSMISSGSRFVYICRNPKDVLVSKW------VFMNKA 155
+ + P R TH+P L+P +M+ + + VY+ R+P+DV VS + +NK
Sbjct: 149 LLAAVPPTEKRFVKTHLPLSLMPPNMLDT-VKMVYLARDPRDVAVSSFHHARLLYLLNKQ 207
Query: 156 RPKELPPLSLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVL 215
+ +D +E+F +G+ P+++HV W A P +LFL YE+ +++
Sbjct: 208 S-------NFKDFWEMFHRGLYTLTPYFEHVKEAW-AKRHDP-NMLFLFYEDYLKDLPGS 258
Query: 216 LKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSNQLVIDNCDFFR 275
+ R+A+FLG+ L EE + E + F+N + VN + ++ D F R
Sbjct: 259 IARIADFLGK--KLSEEQIQRLSEHLNFEKFKNNGA--VNMEDYREIG--ILADGEHFIR 312
Query: 276 KGRVGDWENHLTKEMTERLDQITEEKLE 303
KG+ G W ++ +EMT++ ++ ++ L+
Sbjct: 313 KGKAGCWRDYFDEEMTKQAEKWIKDNLK 340
>pdb|3NIB|A Chain A, Teg14 Apo
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/277 (17%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 5 LPKGKGWMTEHLVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALI 64
+P+G H+ G G++ G+ +I A++PK G TWL+ ++
Sbjct: 15 VPRGS-----HMASMTGGQQMGRGSMNGIRWI-------------ASYPKAGNTWLRCML 56
Query: 65 FATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLP-----SPRLFATHIP 119
A ++ ++ + + + +P P L TH+
Sbjct: 57 AA-------------YITGKAPQTWKDMETVSLELEGMLHLGDMPPTEPTKPVLVKTHLK 103
Query: 120 YDLLPNSMISSGS-RFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAF------ELF 172
D+ + S + + +Y+ RNP+D+L+S +R + F +
Sbjct: 104 ADVPVLGLYSEATAKVLYLVRNPRDILLSAMRMTAISRDDMESSRTFARDFIANEGLRMR 163
Query: 173 CKGVSHYGPFWDHVLGYWKASLES---PEKILFLKYEEMMREPFVLLKRLAEF--LGQPF 227
+G W + W S +L ++YE++ +P + EF LG P
Sbjct: 164 GRGGGAGLGSWPENVRIWTESSRDRFPNADVLTMRYEDLKGDPVARFSEIVEFLDLGDPV 223
Query: 228 SLEEESDGVVHEIIRLCSFENLSSLEVNKTKVKRFSN 264
+E+ + + C+ E + LE + ++++
Sbjct: 224 DIED-----IRRAVAACTLERMRELEKRSQQQGQWAS 255
>pdb|3MGB|A Chain A, Teg 12 Ternary Structure Complexed With Pap And The
Teicoplanin Aglycone
pdb|3MGB|B Chain B, Teg 12 Ternary Structure Complexed With Pap And The
Teicoplanin Aglycone
pdb|3MGC|A Chain A, Teg12 Apo
pdb|3MGC|B Chain B, Teg12 Apo
Length = 319
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 102/274 (37%), Gaps = 67/274 (24%)
Query: 5 LPKGKGWMTEHLVYYKGCWLTAYGALKGLMFIQDHFKAQPTDIFLATFPKCGTTWLKALI 64
+P+G H+ G G++ G+ +I A++PK G TW++ ++
Sbjct: 15 VPRGS-----HMASMTGGQQMGRGSMNGIRWI-------------ASYPKAGNTWVRCML 56
Query: 65 FATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQNNPVSSIHSLP-----SPRLFATHIP 119
A ++ +DA + LP P L TH+
Sbjct: 57 AA-------------YITGKAPQVWNDIDAESLTLEAMLRFGDLPPAEPMEPVLVKTHLK 103
Query: 120 YDLLPNSMISSGS-RFVYICRNPKDVLVSKWVFMNKARPKELPPLSLEDAFELFCKGVSH 178
D+ + + + +Y+ RNP+D+L+S + +R +E + + K +++
Sbjct: 104 ADVPVLGLYGEATAKVLYLVRNPRDMLLSSMRMASISRD------DVEKSRDFARKFIAN 157
Query: 179 YGPFWDHVLGYWKASLES-PEK----------------ILFLKYEEMMREPFVLLKRLAE 221
G W+ + L S PE +L ++YE++ +P + E
Sbjct: 158 EGLGWNALGAGGGVGLGSWPENVRSWTESSSDRFPNADVLTMRYEDLKGDPVARFSEIVE 217
Query: 222 F--LGQPFSLEEESDGVVHEIIRLCSFENLSSLE 253
F LG P +E+ + + + E + LE
Sbjct: 218 FLDLGGPVDIED-----IRRAVAASTLERMRELE 246
>pdb|3MG9|A Chain A, Teg 12 Binary Structure Complexed With The Teicoplanin
Aglycone
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 90/231 (38%), Gaps = 49/231 (21%)
Query: 48 FLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQNNPVSSIHS 107
++A++PK G TW++ ++ A ++ +DA +
Sbjct: 15 WIASYPKAGNTWVRCMLAA-------------YITGKAPQVWNDIDAESLTLEAMLRFGD 61
Query: 108 LP-----SPRLFATHIPYDLLPNSMISSGS-RFVYICRNPKDVLVSKWVFMNKARPKELP 161
LP P L TH+ D+ + + + +Y+ RNP+D+L+S + +R
Sbjct: 62 LPPAEPMEPVLVKTHLKADVPVLGLYGEATAKVLYLVRNPRDMLLSSMRMASISRD---- 117
Query: 162 PLSLEDAFELFCKGVSHYGPFWDHVLGY-------WKASLES----------PEKILFLK 204
+E + + K +++ G W+ + W ++ S +L ++
Sbjct: 118 --DVEKSRDFARKFIANEGLGWNALGAGGGVGLGSWPENVRSWTESSSDRFPNADVLTMR 175
Query: 205 YEEMMREPFVLLKRLAEF--LGQPFSLEEESDGVVHEIIRLCSFENLSSLE 253
YE++ +P + EF LG P +E+ + + + E + LE
Sbjct: 176 YEDLKGDPVARFSEIVEFLDLGGPVDIED-----IRRAVAASTLERMRELE 221
>pdb|4EEC|A Chain A, Crystal Structure Of The Glycopeptide Antibiotic
Sulfotransferase Stal Complexed With A3p And
Desulfo-A47934.
pdb|4EEC|B Chain B, Crystal Structure Of The Glycopeptide Antibiotic
Sulfotransferase Stal Complexed With A3p And
Desulfo-A47934
Length = 286
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 48 FLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQNNPVSSIHS 107
++A++PK G WL+ ++ + + + + P + A VP L+ + S+
Sbjct: 22 WIASYPKAGGHWLRCMLTSYVTGEPVE--TWPGIQAG----VPHLEGLLRDGEAPSAD-- 73
Query: 108 LPSPR-LFATHIPYDL-LPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSL 165
P + L ATH D + S ++ V + RNP+D ++S R K +PP +
Sbjct: 74 -PDEQVLLATHFTADRPVLRFYRESTAKVVCLIRNPRDAMLS------LMRMKGIPPEDV 126
Query: 166 EDAFELFCKGVSHYG----------PFWDHVLGYWKASLESP---EKILFLKYEEMMREP 212
E ++ ++ G W + W S+ +L ++YE++ ++P
Sbjct: 127 EACRKIAETFIADEGFSSVRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRKDP 186
Query: 213 FVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLE 253
L ++ +F LE V + + C+ E + +E
Sbjct: 187 EGELWKVVDF------LELGGRDGVADAVANCTLERMREME 221
>pdb|2OV8|A Chain A, Crystal Structure Of Stal
pdb|2OVB|A Chain A, Crystal Structure Of Stal-Sulfate Complex
pdb|2OVF|A Chain A, Crystal Structure Of Stal-Pap Complex
Length = 288
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 48 FLATFPKCGTTWLKALIFATMNRSRYDFPSHPLLSASPHDCVPFLDAYIFQNNPVSSIHS 107
++A++PK G WL+ ++ + + + + P + A VP L+ + S+
Sbjct: 24 WIASYPKAGGHWLRCMLTSYVTGEPVE--TWPGIQAG----VPHLEGLLRDGEAPSAD-- 75
Query: 108 LPSPR-LFATHIPYDL-LPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPLSL 165
P + L ATH D + S ++ V + RNP+D ++S R K +PP +
Sbjct: 76 -PDEQVLLATHFTADRPVLRFYRESTAKVVCLIRNPRDAMLS------LMRMKGIPPEDV 128
Query: 166 EDAFELFCKGVSHYG----------PFWDHVLGYWKASLESP---EKILFLKYEEMMREP 212
E ++ ++ G W + W S+ +L ++YE++ ++P
Sbjct: 129 EACRKIAETFIADEGFSSVRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRKDP 188
Query: 213 FVLLKRLAEFLGQPFSLEEESDGVVHEIIRLCSFENLSSLE 253
L ++ +F LE V + + C+ E + +E
Sbjct: 189 EGELWKVVDF------LELGGRDGVADAVANCTLERMREME 223
>pdb|4GBM|A Chain A, Sulfotransferase Domain From The Curacin Biosynthetic
Pathway
Length = 323
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 110 SPRLFATHIPYDLLPNSMISSG------SRFVYICRNPKDVLVSKWVFMNKARPKELPPL 163
+PRL P + +++ G S+++Y+ R+P V+ S +V M R ++L L
Sbjct: 129 APRLLVDKSPTYAMEPTILERGEALFANSKYIYLVRHPYSVIES-FVRM---RMQKLVGL 184
Query: 164 SLEDAFELFCKGVSHYGPFWDHVLGYWKASLESPEKILFLKYEEMMREPFVLLKRLAEFL 223
E+ + + + ++L + + LE PE+ ++YE+++++P +L +L +FL
Sbjct: 185 GEENPYRV---AEQVWAKSNQNILNFL-SQLE-PERQHQIRYEDLVKKPQQVLSQLCDFL 239
Query: 224 GQPFSLE 230
PF E
Sbjct: 240 NVPFEPE 246
>pdb|2Z6V|A Chain A, Crystal Structure Of Sulfotransferase Stf9 From
Mycobacterium Avium
Length = 414
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 198 EKILFLKYEEMMREPFVLLKRLAEFLGQPFSLEEES 233
E+ + Y EMMR+P +++R+ E+ +P + E E+
Sbjct: 329 ERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEA 364
>pdb|1T36|B Chain B, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|D Chain D, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|F Chain F, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|H Chain H, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
Length = 382
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 50 ATFPKCGTTWLKALIFATM------NRSRYDFPSHPLLSASPHDCVPFLDAYI 96
AT P K+L T+ ++ + F HP S PHD P D +I
Sbjct: 319 ATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFI 371
>pdb|1C30|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C3O|B Chain B, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|D Chain D, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|F Chain F, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|H Chain H, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
Length = 382
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 50 ATFPKCGTTWLKALIFATM------NRSRYDFPSHPLLSASPHDCVPFLDAYI 96
AT P K+L T+ ++ + F HP S PHD P D +I
Sbjct: 319 ATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFI 371
>pdb|1CS0|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1KEE|B Chain B, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|D Chain D, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|F Chain F, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|H Chain H, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
Length = 382
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 50 ATFPKCGTTWLKALIFATM------NRSRYDFPSHPLLSASPHDCVPFLDAYI 96
AT P K+L T+ ++ + F HP S PHD P D +I
Sbjct: 319 ATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFI 371
>pdb|1JDB|C Chain C, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|F Chain F, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|I Chain I, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|L Chain L, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1BXR|B Chain B, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|D Chain D, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|F Chain F, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|H Chain H, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1CE8|B Chain B, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|D Chain D, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|F Chain F, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|H Chain H, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
Length = 382
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 50 ATFPKCGTTWLKALIFATM------NRSRYDFPSHPLLSASPHDCVPFLDAYI 96
AT P K+L T+ ++ + F HP S PHD P D +I
Sbjct: 319 ATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFI 371
>pdb|1MCP|H Chain H, Phosphocholine Binding Immunoglobulin Fab McPC603. AN
X-Ray Diffraction Study At 2.7 Angstroms
pdb|2MCP|H Chain H, Refined Crystal Structure Of The Mc/pc603
Fab-phosphocholine Complex At 3.1 Angstroms Resolution
Length = 222
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1 LVASLPKGKGWMTEHLVYYKGCWLTAYGALKGLMFIQ-DHFKAQPTDIFLATFPKCGTTW 59
+ AS KG + TE+ KG ++ + + ++++Q + +A+ T I+ G+TW
Sbjct: 48 IAASRNKGNKYTTEYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIYYCARNYYGSTW 107
>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
pdb|3VKG|B Chain B, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
Length = 3245
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 118 IPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPL----SLEDAFELFC 173
+P L +S+ S + + R K VLVS K +P +LPP+ S A +++C
Sbjct: 766 VPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPQLPPITDAESKTKADQIYC 825
Query: 174 K 174
+
Sbjct: 826 Q 826
>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
pdb|3VKH|B Chain B, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
Length = 3367
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 118 IPYDLLPNSMISSGSRFVYICRNPKDVLVSKWVFMNKARPKELPPL----SLEDAFELFC 173
+P L +S+ S + + R K VLVS K +P +LPP+ S A +++C
Sbjct: 766 VPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPQLPPITDAESKTKADQIYC 825
Query: 174 K 174
+
Sbjct: 826 Q 826
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,561,310
Number of Sequences: 62578
Number of extensions: 391410
Number of successful extensions: 957
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 777
Number of HSP's gapped (non-prelim): 63
length of query: 307
length of database: 14,973,337
effective HSP length: 99
effective length of query: 208
effective length of database: 8,778,115
effective search space: 1825847920
effective search space used: 1825847920
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)