Query 041958
Match_columns 126
No_of_seqs 106 out of 620
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 21:35:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041958.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041958hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 1.5E-29 5E-34 219.6 7.3 106 3-112 427-554 (554)
2 3m00_A Aristolochene synthase; 100.0 2.4E-29 8.2E-34 218.1 7.9 106 3-112 422-550 (550)
3 3n0f_A Isoprene synthase; terp 100.0 3.4E-29 1.1E-33 217.3 8.3 105 3-111 425-551 (555)
4 3p5p_A Taxadiene synthase; cla 99.9 5.2E-28 1.8E-32 216.0 9.5 111 2-116 626-760 (764)
5 3sdr_A Alpha-bisabolene syntha 99.9 5E-28 1.7E-32 217.4 7.5 108 2-112 686-817 (817)
6 1n1b_A (+)-bornyl diphosphate 99.9 8.5E-28 2.9E-32 207.9 8.0 96 13-111 432-549 (549)
7 2ong_A 4S-limonene synthase; m 99.9 4.7E-27 1.6E-31 202.9 9.9 96 13-111 425-543 (543)
8 3s9v_A Abietadiene synthase, c 99.9 8.3E-27 2.8E-31 208.8 9.2 105 2-110 657-784 (785)
9 2j5c_A 1,8-cineole synthase; t 99.9 9.2E-27 3.1E-31 202.3 7.1 96 13-111 452-569 (569)
10 1ps1_A Pentalenene synthase; a 99.7 1.1E-17 3.7E-22 133.7 6.3 71 4-79 197-267 (337)
11 3kb9_A EPI-isozizaene synthase 99.7 4E-17 1.4E-21 134.4 6.8 72 3-79 238-309 (382)
12 1di1_A Aristolochene synthase; 99.6 7.8E-17 2.7E-21 126.4 4.8 65 13-80 190-262 (300)
13 3bny_A Aristolochene synthase; 99.6 8.7E-16 3E-20 121.8 5.7 64 13-79 204-275 (320)
14 3v1v_A 2-MIB synthase, 2-methy 99.5 2.4E-14 8.1E-19 120.8 6.0 72 3-79 315-387 (433)
15 3pya_A ENT-copalyl diphosphate 98.7 8.6E-09 3E-13 92.0 3.7 80 5-116 627-725 (727)
16 1yyq_A Trichodiene synthase; t 96.4 0.005 1.7E-07 50.8 6.0 63 14-79 211-274 (374)
17 3fau_A NEDD4-binding protein 2 61.5 8.4 0.00029 24.3 3.4 22 54-77 6-27 (82)
18 2d9i_A NEDD4-binding protein 2 44.1 21 0.00072 23.1 3.2 21 54-76 14-34 (96)
19 2zqe_A MUTS2 protein; alpha/be 40.6 28 0.00097 22.2 3.4 21 54-76 10-30 (83)
20 4akk_A Nitrate regulatory prot 33.9 40 0.0014 27.5 4.0 58 27-86 353-411 (423)
21 3tqc_A Pantothenate kinase; bi 32.1 50 0.0017 26.0 4.2 50 14-79 236-286 (321)
22 3qd7_X Uncharacterized protein 31.0 44 0.0015 23.4 3.4 36 38-77 39-74 (137)
23 1tr8_A Conserved protein (MTH1 29.8 33 0.0011 23.2 2.4 24 44-69 66-89 (102)
24 4evx_A Putative phage endolysi 28.9 1.2E+02 0.0042 19.8 5.2 22 58-79 50-71 (106)
25 1xri_A AT1G05000; structural g 28.0 45 0.0015 22.3 2.9 26 43-70 106-131 (151)
26 3rz2_A Protein tyrosine phosph 25.7 37 0.0013 23.9 2.2 27 41-69 129-155 (189)
27 3hdf_A Lysozyme; antimicrobial 25.2 1.4E+02 0.0047 20.6 5.1 32 58-89 41-85 (140)
28 3s4o_A Protein tyrosine phosph 25.0 39 0.0013 22.6 2.2 25 43-69 123-148 (167)
29 4e97_A Lysozyme; hydrolase, al 24.7 1.2E+02 0.0041 21.7 4.9 35 57-91 80-132 (187)
30 3s4e_A Dual specificity protei 22.3 56 0.0019 21.7 2.5 25 44-70 96-121 (144)
31 3mmj_A MYO-inositol hexaphosph 21.6 38 0.0013 27.2 1.7 50 40-91 224-293 (314)
32 1yn9_A BVP, polynucleotide 5'- 21.3 59 0.002 22.3 2.5 25 43-69 127-152 (169)
33 2c46_A MRNA capping enzyme; ph 20.3 72 0.0024 23.9 3.0 25 43-69 155-180 (241)
34 1rxd_A Protein tyrosine phosph 20.2 55 0.0019 21.6 2.1 26 42-69 109-134 (159)
35 2vkc_A NEDD4-binding protein 2 20.1 82 0.0028 21.6 3.0 21 53-75 58-78 (135)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=99.96 E-value=1.5e-29 Score=219.56 Aligned_cols=106 Identities=22% Similarity=0.295 Sum_probs=88.4
Q ss_pred chhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---
Q 041958 3 MDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL--- 79 (126)
Q Consensus 3 ~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln--- 79 (126)
+++++.+.. +|+++++++.|+| |+|||+||++|++||+++|+|+||||||| +|+|+|+++|+++|+++||+||
T Consensus 427 ~e~~e~~~~-~p~i~~~~~~I~R-L~NDI~S~k~E~~rG~van~V~cYMke~G--vSeEeA~~~i~~~Ie~~wK~lN~e~ 502 (554)
T 3g4d_A 427 PETFKWAAS-DPKIIQASTIICR-FMDDVAEHKFKHRREDDCSAIECYMEEYG--VTAQEAYDVFNKHVESAWKDLNQEF 502 (554)
T ss_dssp HHHHHHHHT-CCHHHHHHHHHHH-HHHHHHHHCC------CCCHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc-cHHHHHHHHHHHH-HhcccchhhhhhccCCccHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555332 3999999999999 99999999999999999999999999999 9999999999999999999999
Q ss_pred --------hHHHHHHHHHhh----c----CCCCCChhhhh---hhccccccC
Q 041958 80 --------PYLKLQLNFVES----Y----DYGVQNQETMD---TLLFQPILE 112 (126)
Q Consensus 80 --------~~~~~~lNlaRv----Y----gyt~~~~~~k~---sll~~Pi~~ 112 (126)
+|++++||+||+ | |||.|+.++|+ +||++||++
T Consensus 503 l~~~~~p~~~~~~~~NlaR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~l 554 (554)
T 3g4d_A 503 LKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554 (554)
T ss_dssp SSSCSSCHHHHHHHHHHHHHHHHHSCC-----CCCHHHHHHHHHHHTCCCCC
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHhcCCCCC
Confidence 899999999999 6 99998778999 999999974
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=99.96 E-value=2.4e-29 Score=218.07 Aligned_cols=106 Identities=17% Similarity=0.228 Sum_probs=93.7
Q ss_pred chhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---
Q 041958 3 MDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL--- 79 (126)
Q Consensus 3 ~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln--- 79 (126)
+++++.+.. +|++++++++|+| |+|||+||++|++||+++|+|+||||||| +|+|+|+++|+++|+++||+||
T Consensus 422 ~e~~e~~~~-~p~i~~~~~~I~R-L~NDI~S~k~E~~rG~vas~V~cYMke~G--vSeEeA~~~i~~~Ie~~wK~lN~e~ 497 (550)
T 3m00_A 422 EQDFEWLSK-NPKILEASVIICR-VIDDTATYEVEKSRGQIATGIECCMRDYG--ISTKEAMAKFQNMAETAWKDINEGL 497 (550)
T ss_dssp HHHHHHHHT-CCHHHHHHHHHHH-HHHHHHSHHHHHHTTCTTSHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhcc-cHHHHHHHhhhhe-eeccchhHHHHHhcCCcccHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555332 4999999999999 99999999999999999999999999999 9999999999999999999999
Q ss_pred --------hHHHHHHHHHhh----c-----CCCCCChhhhh---hhccccccC
Q 041958 80 --------PYLKLQLNFVES----Y-----DYGVQNQETMD---TLLFQPILE 112 (126)
Q Consensus 80 --------~~~~~~lNlaRv----Y-----gyt~~~~~~k~---sll~~Pi~~ 112 (126)
+|++++||+||+ | |||.|+.+||+ +||++||++
T Consensus 498 l~~~~~p~~~~~~~~NlaR~~~~~Y~~~~Dg~t~~~~~~k~~i~~ll~~Pi~~ 550 (550)
T 3m00_A 498 LRPTPVSTEFLTPILNLARIIEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 550 (550)
T ss_dssp SSSCSSCGGGTHHHHHHHHHHHHHTSCC-----CCHHHHHHHHHHHHTCCCCC
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHhhCCCCC
Confidence 899999999999 6 67887668999 999999974
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=99.95 E-value=3.4e-29 Score=217.32 Aligned_cols=105 Identities=23% Similarity=0.467 Sum_probs=94.3
Q ss_pred chhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---
Q 041958 3 MDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL--- 79 (126)
Q Consensus 3 ~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln--- 79 (126)
+++++.+. .+|++++++++|+| |+|||+||++|++||+++|+|+||||||| +|+|+|+++|+++|+++||+||
T Consensus 425 ~e~~e~~~-~~p~i~~~~~~i~R-L~NDi~S~~~E~~rG~vas~V~cYMke~G--vSeEeA~~~i~~~Ie~~wK~lN~e~ 500 (555)
T 3n0f_A 425 KEEIENLQ-KYHDIISRPSHIFR-LCNDLASASAEIARGETANSVSCYMRTKG--ISEELATESVMNLIDETWKKMNKEK 500 (555)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHH-HHHHHHHHHHHHTTTCCCSHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc-cchHHHHHHHHHHH-HhccchhhhhhhhcCCcchHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455432 24999999999999 99999999999999999999999999999 9999999999999999999999
Q ss_pred --------hHHHHHHHHHhh----c----CCCCCChhhhh---hhcccccc
Q 041958 80 --------PYLKLQLNFVES----Y----DYGVQNQETMD---TLLFQPIL 111 (126)
Q Consensus 80 --------~~~~~~lNlaRv----Y----gyt~~~~~~k~---sll~~Pi~ 111 (126)
+|++++||+||+ | |||.|+.+||+ +||++||+
T Consensus 501 l~~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~ 551 (555)
T 3n0f_A 501 LGGSLFAKPFVETAINLARQSHCTYHNGDAHTSPDELTRKRVLSVITEPIL 551 (555)
T ss_dssp HSCCSSCHHHHHHHHHHHHHHHHHSCCC---CCHHHHHHHHHHHHTTSCCC
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHhcCCC
Confidence 899999999999 6 99987668999 99999998
No 4
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=99.95 E-value=5.2e-28 Score=215.98 Aligned_cols=111 Identities=23% Similarity=0.322 Sum_probs=94.4
Q ss_pred cchhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcC-CccCCHHHHHHHHHHHHHHHHHHHh-
Q 041958 2 SMDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEI-NWHLEEEVARDHINDLVRQTWKKIL- 79 (126)
Q Consensus 2 ~~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~-g~~vteEeA~~~i~~lIe~~WKeln- 79 (126)
++++++.+++ +|+|+++++.|+| |+|||+||++|++||+++|+|+|||||| | +|+|+|+++|+++|+++||+||
T Consensus 626 t~e~~e~~~~-~~~l~~~~~~I~R-L~NDi~S~k~E~~rG~~as~V~cYMke~~g--vSeEeA~~~i~~~Ie~~wKeln~ 701 (764)
T 3p5p_A 626 KDDVVEKVHY-PSNMFELVSLSWR-LTNDTKTYQAEKARGQQASGIACYMKDNPG--ATEEDAIKHICRVVDRALKEASF 701 (764)
T ss_dssp CGGGHHHHST-TSHHHHHHHHHHH-HHHHHHHHHHHHTTTCCCSHHHHHHHHSTT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHhhhhh-hHHHHHHHHHHHH-hhhcccchHHHHhcCCcchHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777665 3999999999999 9999999999999999999999999999 7 9999999999999999999998
Q ss_pred -----------hHHHHHHHHHhh----c----CCCCCChhhhh---hhccccccCCCcc
Q 041958 80 -----------PYLKLQLNFVES----Y----DYGVQNQETMD---TLLFQPILEDKGM 116 (126)
Q Consensus 80 -----------~~~~~~lNlaRv----Y----gyt~~~~~~k~---sll~~Pi~~~~~~ 116 (126)
+|++++||+||+ | |||.|+.+||+ +||++||+.-.+|
T Consensus 702 e~l~~~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~~~~~~ 760 (764)
T 3p5p_A 702 EYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQVGSHH 760 (764)
T ss_dssp HHHSCCSSSCHHHHHHHHHTHHHHHHHSCC-------CCCHHHHHHHHHTCCCCC----
T ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHHhcCCccCccC
Confidence 899999999999 6 99998667999 9999999865443
No 5
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=99.94 E-value=5e-28 Score=217.36 Aligned_cols=108 Identities=24% Similarity=0.358 Sum_probs=93.5
Q ss_pred cchhhhhccc-chhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcC-CccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 2 SMDLLDDLEL-FIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEI-NWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 2 ~~~~~~~~~~-~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~-g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
++++++.+++ .+|+|+++++.|+| |+|||+||++|++||+++|+|+|||||| | +|+|+|+++|+++|+++||+||
T Consensus 686 t~e~~e~~~~~s~p~l~~~~~~I~R-L~NDi~S~k~E~~rG~~assV~cYMke~~g--vS~EeA~~~i~~~Ie~~wKeln 762 (817)
T 3sdr_A 686 SQEALEKVDYPGRRVLTELNSLISR-LADDTKTYKAEKARGELASSIECYMKDHPE--CTEEEALDHIYSILEPAVKELT 762 (817)
T ss_dssp CHHHHHTTCCTTSCSHHHHHHHHHH-HHHHHHSSCC------CCCHHHHHHHHSTT--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhcccccchHHHHHHHHHHHH-HhccchHHHHHHhcCCcchHHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 4567777876 24699999999999 9999999999999999999999999999 7 9999999999999999999999
Q ss_pred -----------hHHHHHHHHHhh----c----CCCCCChhhhh---hhccccccC
Q 041958 80 -----------PYLKLQLNFVES----Y----DYGVQNQETMD---TLLFQPILE 112 (126)
Q Consensus 80 -----------~~~~~~lNlaRv----Y----gyt~~~~~~k~---sll~~Pi~~ 112 (126)
+|++++||+||+ | |||.|+.+||+ +||++||+.
T Consensus 763 ~e~l~~~~~p~~~~~~~ln~aR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~pi~l 817 (817)
T 3sdr_A 763 REFLKPDDVPFACKKMLFEETRVTMVIFKDGDGFGVSKLEVKDHIKECLIEPLPL 817 (817)
T ss_dssp HHHHSCCSSCHHHHHHHHHHHHHHHHHTCSCCSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhcCCCCC
Confidence 899999999999 6 89998778999 999999973
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=99.94 E-value=8.5e-28 Score=207.92 Aligned_cols=96 Identities=34% Similarity=0.495 Sum_probs=79.9
Q ss_pred hhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh-----------hH
Q 041958 13 IDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL-----------PY 81 (126)
Q Consensus 13 ~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln-----------~~ 81 (126)
+|+++++++.|+| |+|||+||++|++||+++|+|+||||||| +|+|||+++++++|+++||++| +|
T Consensus 432 ~p~i~~~~~~i~R-L~NDi~S~~~E~~rG~v~n~V~cyMke~g--~s~eeA~~~i~~~i~~~wk~ln~e~l~~~~vp~~~ 508 (549)
T 1n1b_A 432 YHDILCLAGIILR-LPDDLGTSYFELARGDVPKTIQCYMKETN--ASEEEAVEHVKFLIREAWKDMNTAIAAGYPFPDGM 508 (549)
T ss_dssp TCHHHHHHHHHHH-HHHHHC---------CCCCHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCHHH
T ss_pred cHHHHHHHHHHHH-HhcccchhhhhhccCCccHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 4999999999999 99999999999999999999999999999 9999999999999999999999 89
Q ss_pred HHHHHHHHhh----c----CCCCCChhhhh---hhcccccc
Q 041958 82 LKLQLNFVES----Y----DYGVQNQETMD---TLLFQPIL 111 (126)
Q Consensus 82 ~~~~lNlaRv----Y----gyt~~~~~~k~---sll~~Pi~ 111 (126)
+++++|+||+ | |||.|+.++|+ +||++|||
T Consensus 509 ~~~~~n~~R~~~~~Y~~~Dg~t~~~~~~k~~i~~l~~~pi~ 549 (549)
T 1n1b_A 509 VAGAANIGRVAQFIYLHGDGFGVQHSKTYEHIAGLLFEPYA 549 (549)
T ss_dssp HHHHHHHHHHHHHHTTTSCCC----CHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHeeehheeCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence 9999999999 6 89998778999 99999986
No 7
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=99.94 E-value=4.7e-27 Score=202.85 Aligned_cols=96 Identities=29% Similarity=0.488 Sum_probs=91.2
Q ss_pred hhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh------------h
Q 041958 13 IDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL------------P 80 (126)
Q Consensus 13 ~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln------------~ 80 (126)
+|+++++++.|+| |+|||+||++|++||+++|+|+||||||| +|+|+|+++++++|+++||+|| +
T Consensus 425 ~p~i~~~~~~i~R-L~NDi~S~~~E~~rG~~~n~V~cyMke~g--~s~eeA~~~i~~~ie~~wk~ln~e~~l~~~~vp~~ 501 (543)
T 2ong_A 425 YHDLVRWSSFVLR-LADDLGTSVEEVSRGDVPKSLQCYMSDYN--ASEAEARKHVKWLIAEVWKKMNAERVSKDSPFGKD 501 (543)
T ss_dssp TCHHHHHHHHHHH-HHHHHHSSHHHHHTSCCCCHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHHHHTCSSCSSCHH
T ss_pred cHHHHHHHHHHHH-HhcccchhhhccccCCccHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHH
Confidence 4999999999999 99999999999999999999999999999 9999999999999999999998 7
Q ss_pred HHHHHHHHHhh----c----CCCCCChhhhh---hhcccccc
Q 041958 81 YLKLQLNFVES----Y----DYGVQNQETMD---TLLFQPIL 111 (126)
Q Consensus 81 ~~~~~lNlaRv----Y----gyt~~~~~~k~---sll~~Pi~ 111 (126)
|+++++|+||+ | |||.|+.++|+ +||++|||
T Consensus 502 ~~~~~~n~aR~~~~~Y~~~D~~t~~~~~~k~~i~~l~~~pi~ 543 (543)
T 2ong_A 502 FIGCAVDLGRMAQLMYHNGDGHGTQHPIIHQQMTRTLFEPFA 543 (543)
T ss_dssp HHHHHHHHHHHHHHHTSSCSTTSSSCTTHHHHHHHHHTSCC-
T ss_pred HHHHHHHHHHeehhheeCCCCCCCccHHHHHHHHHHhccCCC
Confidence 79999999999 6 99998778999 99999986
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=99.93 E-value=8.3e-27 Score=208.75 Aligned_cols=105 Identities=19% Similarity=0.355 Sum_probs=92.5
Q ss_pred cchhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcC-CccCCHHHHHHHHHHHHHHHHHHHh-
Q 041958 2 SMDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEI-NWHLEEEVARDHINDLVRQTWKKIL- 79 (126)
Q Consensus 2 ~~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~-g~~vteEeA~~~i~~lIe~~WKeln- 79 (126)
++++++.+++ +|+|+++++.|+| |+|||+||++|++||+++|+|+|||||| | +|+|+|+++|+++|+++||+||
T Consensus 657 t~e~~e~~~~-~~~l~~~~~~I~R-L~NDi~S~k~E~~rG~~as~V~cYMke~~g--vSeEeA~~~i~~~Ie~~wKeln~ 732 (785)
T 3s9v_A 657 TDEVLSKIDR-ESRFLQLMGLTGR-LVNDTKTYQAERGQGEVASAIQCYMKDHPK--ISEEEALQHVYSVMENALEELNR 732 (785)
T ss_dssp CHHHHTTTST-TSHHHHHHHHHHH-HHHHHHHHHHHHHHSCCCSHHHHHHHHCTT--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhcccc-cHHHHHHHHHHHH-HhcccchhhHHHhcCCcchHHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666665 3999999999999 9999999999999999999999999999 8 9999999999999999999999
Q ss_pred ---------hHHHHHHHHHhh----c----CCCCCCh-hhhh---hhccccc
Q 041958 80 ---------PYLKLQLNFVES----Y----DYGVQNQ-ETMD---TLLFQPI 110 (126)
Q Consensus 80 ---------~~~~~~lNlaRv----Y----gyt~~~~-~~k~---sll~~Pi 110 (126)
+|++++||+||+ | |||.|+. +||+ +||++||
T Consensus 733 e~l~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~~k~~i~~ll~~Pi 784 (785)
T 3s9v_A 733 EFVNNKIPDIYKRLVFETARIMQLFYMQGDGLTLSHDMEIKEHVKNCLFQPV 784 (785)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHTSCC
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHhcccC
Confidence 689999999999 6 8998765 6999 9999997
No 9
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=99.93 E-value=9.2e-27 Score=202.25 Aligned_cols=96 Identities=33% Similarity=0.525 Sum_probs=74.8
Q ss_pred hhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh----------hHH
Q 041958 13 IDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL----------PYL 82 (126)
Q Consensus 13 ~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln----------~~~ 82 (126)
+|+++++++.|+| |+|||+||++|++||+++|+|+|||||+| +|+|+|+++++++|+++||+|| +|+
T Consensus 452 ~p~i~~~~~~i~R-L~NDI~S~~~E~~rG~v~s~V~cyMke~g--~s~eeA~~~i~~~ie~~wk~ln~e~l~~~vp~~~~ 528 (569)
T 2j5c_A 452 YHDIVRASCTILR-LADDMGTSLDEVERGDVPKSVQCYMNEKN--ASEEEAREHVRSLIDQTWKMMNKEMMTSSFSKYFV 528 (569)
T ss_dssp TCHHHHHHHHHHH-HHHHHHC----------CCHHHHC--------CCHHHHHHHHHHHHHHHHHHHHHHHHCCSCHHHH
T ss_pred cHHHHHHHHHHHH-HhcccchhhhhcccCCccHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH
Confidence 4999999999999 99999999999999999999999999999 9999999999999999999998 899
Q ss_pred HHHHHHHhh----c-----CCCCCChhhhh---hhcccccc
Q 041958 83 KLQLNFVES----Y-----DYGVQNQETMD---TLLFQPIL 111 (126)
Q Consensus 83 ~~~lNlaRv----Y-----gyt~~~~~~k~---sll~~Pi~ 111 (126)
++++|+||+ | |||.|+.++|+ +||++|||
T Consensus 529 ~~~~nlaR~~~~~Y~~~~Dg~t~~~~~~k~~i~~ll~~pi~ 569 (569)
T 2j5c_A 529 EVSANLARMAQWIYQHESDGFGMQHSLVNKMLRDLLFHRYE 569 (569)
T ss_dssp HHHHHHHHHHHHHTGGGSCTTC-CCCHHHHHHHHHHTSCCC
T ss_pred HHHHHHHheeehhccCCCcCCCCchHHHHHHHHHHhccCCC
Confidence 999999999 5 58888778999 99999986
No 10
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.70 E-value=1.1e-17 Score=133.71 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=65.3
Q ss_pred hhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 4 DLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 4 ~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
+++++..+ +++.++++.++| |+|||.||++|+++|+++|+|.|||+|+| +|+|+|++++.++|+++||++|
T Consensus 197 ~~~~~p~~--~~l~~~~~~i~r-L~NDl~S~~kE~~~G~~~n~V~~~m~~~g--~s~eeA~~~v~~~i~~~~~~~~ 267 (337)
T 1ps1_A 197 RVFDSAVM--SAMLQIAVDVNL-LLNDIASLEKEEARGEQNNMVMILRREHG--WSKSRSVSHMQNEVRARLEQYL 267 (337)
T ss_dssp HHHTSHHH--HHHHHHHHHHHH-HHHHHHTHHHHHHTTCCCSHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhChHH--HHHHHHHHHHHH-HHHHHhhHHHHHhcCCcchHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 44444433 689999999999 99999999999999999999999999999 9999999999999999999998
No 11
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.68 E-value=4e-17 Score=134.40 Aligned_cols=72 Identities=10% Similarity=-0.028 Sum_probs=66.2
Q ss_pred chhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 3 MDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 3 ~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
++++++..+ ++++++++.++| |+|||.||++|+++|+++|+|.|||+++| +|+|+|+++++++|++.||++|
T Consensus 238 ~~~~~~p~~--~~l~~~~~~i~r-L~NDi~S~~kE~~~G~~~N~V~~~m~~~g--~s~eeA~~~v~~~i~~~~k~~~ 309 (382)
T 3kb9_A 238 DAVRKHPAY--RRAALLSQEFAA-WYNDLCSLPKEIAGDEVHNLGISLITHHS--LTLEEAIGEVRRRVEECITEFL 309 (382)
T ss_dssp HHHHTSHHH--HHHHHHHHHHHH-HHHHHHHHHHHHHTTCCCSHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhChHH--HHHHHHHHHHHH-HHHHHHHHHHHHhcCCcccHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 344555444 789999999999 99999999999999999999999999999 9999999999999999999999
No 12
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.65 E-value=7.8e-17 Score=126.43 Aligned_cols=65 Identities=9% Similarity=0.013 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHhHHhcCcchhhHHHHhcCC--------CchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhh
Q 041958 13 IDTFERFGRTCLRSLNSGELASKEELARVD--------ASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKILP 80 (126)
Q Consensus 13 ~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~--------~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln~ 80 (126)
.++++++++.++| |+|||.||++|+++|+ ++|+|.|||+++| +|+|+|+++++++|++.||++|.
T Consensus 190 ~~~l~~~~~~~~~-l~NDl~S~~kE~~~g~~~h~~~~~~~n~V~~~m~~~g--~s~eeA~~~~~~~i~~~~~~~~~ 262 (300)
T 1di1_A 190 MKALEANCAKQLS-VVNDIYSYDKEEEASRTGHKEGAFLCSAVKVLAEESK--LGIPATKRVLWSMTREWETVHDE 262 (300)
T ss_dssp THHHHHHHHHHHH-HHHHHHHTTTTCCC----------CCCHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHhhhHHHHHHHHhhccccccccccchhHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999 9999999999999999 8899999999999 99999999999999999999983
No 13
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.59 E-value=8.7e-16 Score=121.83 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHhHHhcCcchhhHHHHhcCC--------CchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 13 IDTFERFGRTCLRSLNSGELASKEELARVD--------ASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 13 ~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~--------~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
+++++++++.++| |+|||.||++|+++|+ ++|+|.|||+|+| +|+|+|++++.++|++.|++++
T Consensus 204 ~~~l~~~~~~~~~-L~NDl~S~~kE~~~g~~~~~~~~~~~N~V~~~m~~~g--~s~eeA~~~~~~~i~~~~~~~~ 275 (320)
T 3bny_A 204 VREIDANCSKHLS-VVNDIYSYEKELYTSKTAHSEGGILCTSVQILAQEAD--VTAEAAKRVLFVMCREWELRHQ 275 (320)
T ss_dssp THHHHHHHHHHHH-HHHHHHHHHHHCC-----------CCSHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhcccchhHHHHHhhcccccccccccchHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999 9999999999999998 7899999999999 9999999999999999999988
No 14
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=99.49 E-value=2.4e-14 Score=120.81 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=64.0
Q ss_pred chhhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcC-CCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 3 MDLLDDLELFIDTFERFGRTCLRSLNSGELASKEELARV-DASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 3 ~~~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG-~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
++++++..+ .+|.++++.++| |+|||.||++|+++| ++.|+|.|||+++| +|+|+|++++.++|++.++++.
T Consensus 315 ~~v~~~p~~--~~L~~~~~~i~r-L~NDI~Sy~kE~~~gg~~~N~V~~~mke~g--~S~eeA~~~v~~~i~~~~~~F~ 387 (433)
T 3v1v_A 315 ADLHARPDM--QRVIALAGNATT-IVNDLYSYTKELNSPGRHLNLPVVIAEREQ--LCERDAYLKAVEVHNELQHSFE 387 (433)
T ss_dssp HHHHTSHHH--HHHHHHHHHHHH-HHHHHHSHHHHTTSSSCCCCHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCchH--HHHHHHHHHHHH-HhchHHHHHHHHhcCCCCCcHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 344444443 678999999999 999999999999994 78899999999999 9999999999999999999876
No 15
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=98.67 E-value=8.6e-09 Score=91.98 Aligned_cols=80 Identities=9% Similarity=0.086 Sum_probs=55.9
Q ss_pred hhhhcccchhHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh-----
Q 041958 5 LLDDLELFIDTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL----- 79 (126)
Q Consensus 5 ~~~~~~~~~p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln----- 79 (126)
++.+.+| ..|+++++.||| |+||+++|++|+ .+++++.||..|++|+
T Consensus 627 ~l~~~ey--~~L~~ltn~icr-llndl~~~~~E~-------------------------~~~~~~~IE~~mqEL~~lVl~ 678 (727)
T 3pya_A 627 FFTHTHF--VRLAEIINRICL-PRQYLKARRNDE-------------------------KEKTIKSMEKEMGKMVELALS 678 (727)
T ss_dssp GGSSHHH--HHHHHHHHHHSC-CCC------CHH-------------------------HHHHHHHHHHHHHHHHHHHHS
T ss_pred hccChhH--HHHHHHHHHHhH-HHhHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHhc
Confidence 7778888 899999999999 999999999977 4467788888888886
Q ss_pred --------hHHHHHHHHHhh-c--CCCCCChhhhh---hhccccccCCCcc
Q 041958 80 --------PYLKLQLNFVES-Y--DYGVQNQETMD---TLLFQPILEDKGM 116 (126)
Q Consensus 80 --------~~~~~~lNlaRv-Y--gyt~~~~~~k~---sll~~Pi~~~~~~ 116 (126)
+| .|+.++++ | +|+.| . |.. +++++|+-.+.+|
T Consensus 679 ~~~~~ip~~~--tf~~V~ksFYy~ay~~p-~-i~~hI~kVl~~~~~~~~~~ 725 (727)
T 3pya_A 679 ESDTFRDVSI--TFLDVAKAFYYFALCGD-H-LQTHISKVLFQKVGSHHHH 725 (727)
T ss_dssp CCTTTHHHHH--HHHHHHHHHHHHHHHTT-S-CHHHHHHHHHSCCC-----
T ss_pred cCCCCCCCcc--cHHHHHHHHHhhhcCCH-H-HHHHHHHHHcCcccccccc
Confidence 44 55666666 5 99987 4 777 9999999876554
No 16
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=96.42 E-value=0.005 Score=50.85 Aligned_cols=63 Identities=8% Similarity=0.009 Sum_probs=51.9
Q ss_pred hHHHHHHHHHhHHhcCcchhhHHHHhc-CCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 14 DTFERFGRTCLRSLNSGELASKEELAR-VDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 14 p~i~~~~~~i~R~L~nDi~s~k~E~~r-G~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
...++.+..+.= +.|||.||.+|... |+..|.|..++.++| +|.++|+.++..++...-.++.
T Consensus 211 ~~~i~am~~~i~-~~NDIlSf~KE~~~~Gd~~NlV~vl~~~~g--~S~~eAl~~v~~~~~~~~~r~~ 274 (374)
T 1yyq_A 211 TSAIAQMENWMV-WVNDLMSFYKEFDDERDQISLVKNYVVSDE--ISLHEALEKLTQDTLHSSKQMV 274 (374)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHTTCSSCCCCHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hhhhhhccchhhhccCCccchhhhehhcCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 345555555665 79999999999984 999999999999999 9999999999888877766653
No 17
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=61.53 E-value=8.4 Score=24.33 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=19.5
Q ss_pred CCccCCHHHHHHHHHHHHHHHHHH
Q 041958 54 INWHLEEEVARDHINDLVRQTWKK 77 (126)
Q Consensus 54 ~g~~vteEeA~~~i~~lIe~~WKe 77 (126)
|| .+.+||+..+.+.+.++|..
T Consensus 6 HG--l~v~eA~~~l~~~l~~~~~~ 27 (82)
T 3fau_A 6 HG--LHVDEALEHLMRVLEKKTEE 27 (82)
T ss_dssp TT--SCHHHHHHHHHHHHHHHHHH
T ss_pred CC--CcHHHHHHHHHHHHHHHHHH
Confidence 57 99999999999999988863
No 18
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=44.12 E-value=21 Score=23.06 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=18.5
Q ss_pred CCccCCHHHHHHHHHHHHHHHHH
Q 041958 54 INWHLEEEVARDHINDLVRQTWK 76 (126)
Q Consensus 54 ~g~~vteEeA~~~i~~lIe~~WK 76 (126)
|| .+.+||+..+...|.+++.
T Consensus 14 HG--l~v~eA~~~L~~~L~~~~~ 34 (96)
T 2d9i_A 14 HG--LHVDEALEHLMRVLEKKTE 34 (96)
T ss_dssp TT--SCHHHHHHHHHHHHHHHHH
T ss_pred CC--CCHHHHHHHHHHHHHHHHH
Confidence 68 9999999999999998763
No 19
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=40.60 E-value=28 Score=22.19 Aligned_cols=21 Identities=10% Similarity=0.037 Sum_probs=18.8
Q ss_pred CCccCCHHHHHHHHHHHHHHHHH
Q 041958 54 INWHLEEEVARDHINDLVRQTWK 76 (126)
Q Consensus 54 ~g~~vteEeA~~~i~~lIe~~WK 76 (126)
|| .+.|||+..+.+.|.++..
T Consensus 10 hG--~~~~eA~~~l~~fl~~a~~ 30 (83)
T 2zqe_A 10 RG--LTVAEALLEVDQALEEARA 30 (83)
T ss_dssp TT--CCHHHHHHHHHHHHHHHHH
T ss_pred CC--CCHHHHHHHHHHHHHHHHH
Confidence 57 8999999999999998885
No 20
>4akk_A Nitrate regulatory protein; transcription; 2.14A {Klebsiella oxytoca}
Probab=33.92 E-value=40 Score=27.50 Aligned_cols=58 Identities=16% Similarity=0.160 Sum_probs=38.3
Q ss_pred hcCcchhhHHHH-hcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 041958 27 LNSGELASKEEL-ARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKKILPYLKLQL 86 (126)
Q Consensus 27 L~nDi~s~k~E~-~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKeln~~~~~~l 86 (126)
|.+.+...+... .|.-+.-+..+-|+.+| +|+++|.+.|++.-.+....|-.+...++
T Consensus 353 l~~~~~~l~~~l~~r~~i~~Akg~lm~~~~--~~e~~A~~~l~~~sm~~~~~l~~vA~~ii 411 (423)
T 4akk_A 353 LSGQLASLKDALEERKLIEKAKSVLMTYQG--MQEEQAWQALRKMAMDKNQRMVEIARALL 411 (423)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhhC--cCHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 444444444332 23445566668999999 99999999999988877665544444433
No 21
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=32.06 E-value=50 Score=26.04 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=33.1
Q ss_pred hHHHHHHHHHhHHhcCcchhhHHHHhcCCCchhhhhhhhcC-CccCCHHHHHHHHHHHHHHHHHHHh
Q 041958 14 DTFERFGRTCLRSLNSGELASKEELARVDASKSIDCYRHEI-NWHLEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 14 p~i~~~~~~i~R~L~nDi~s~k~E~~rG~~assI~cYMkE~-g~~vteEeA~~~i~~lIe~~WKeln 79 (126)
|.-++....+-| +-..||..-..++.|..+| + .|+|+|.. .+..-|..+|
T Consensus 236 ~~d~~~~R~i~R----------d~~~r~~a~~~~~s~~~~y~~--~s~~ea~~----~a~~~w~~~~ 286 (321)
T 3tqc_A 236 QAQVIQKWYIDR----------VLSFWRTTFKDPHSYFHYLTQ--MSETEVAA----FAKHVWNEIN 286 (321)
T ss_dssp CHHHHHHHHHHH----------HHHHHHTGGGSTTSTTGGGGG--SCHHHHHH----HHHHHHHHTH
T ss_pred CHHHHHHHHHHh----------cchhhhhhccChHHHHHHHhc--CCHHHHHH----HHHHHHHhcc
Confidence 444555666666 2234555445567888999 7 99999885 5556787776
No 22
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=30.99 E-value=44 Score=23.40 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=26.8
Q ss_pred HhcCCCchhhhhhhhcCCccCCHHHHHHHHHHHHHHHHHH
Q 041958 38 LARVDASKSIDCYRHEINWHLEEEVARDHINDLVRQTWKK 77 (126)
Q Consensus 38 ~~rG~~assI~cYMkE~g~~vteEeA~~~i~~lIe~~WKe 77 (126)
..+|+. .++.-+-=|| .+.|||+..+...|.++...
T Consensus 39 Lr~G~~--~~~~~LDLHG--~~~~EA~~~L~~fL~~a~~~ 74 (137)
T 3qd7_X 39 LRSGKY--PQQASLNLLR--QPVEECRKMVFSFIQQALAD 74 (137)
T ss_dssp HHSCCC--CGGGEEECTT--CCHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCC--CCCeEEECCC--CCHHHHHHHHHHHHHHHHHC
Confidence 566764 2444443479 99999999999999998753
No 23
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=29.77 E-value=33 Score=23.16 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=19.9
Q ss_pred chhhhhhhhcCCccCCHHHHHHHHHH
Q 041958 44 SKSIDCYRHEINWHLEEEVARDHIND 69 (126)
Q Consensus 44 assI~cYMkE~g~~vteEeA~~~i~~ 69 (126)
..-|+.-|.|-| +|.++|++.+++
T Consensus 66 ~edi~lv~~q~~--vs~~~A~~aL~~ 89 (102)
T 1tr8_A 66 EDDIELVMNQTG--ASREDATRALQE 89 (102)
T ss_dssp HHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCHHHHHHHHHH
Confidence 356888998889 999999987764
No 24
>4evx_A Putative phage endolysin; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MLY MSE; 1.70A {Salmonella enterica subsp}
Probab=28.94 E-value=1.2e+02 Score=19.82 Aligned_cols=22 Identities=9% Similarity=0.001 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh
Q 041958 58 LEEEVARDHINDLVRQTWKKIL 79 (126)
Q Consensus 58 vteEeA~~~i~~lIe~~WKeln 79 (126)
+|+++|..-+..-+....+.++
T Consensus 50 iT~~ea~~ll~~dl~~~~~~v~ 71 (106)
T 4evx_A 50 ITPDQAEAFLLDDLNSCDILLQ 71 (106)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998888877775
No 25
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=27.97 E-value=45 Score=22.27 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=20.0
Q ss_pred CchhhhhhhhcCCccCCHHHHHHHHHHH
Q 041958 43 ASKSIDCYRHEINWHLEEEVARDHINDL 70 (126)
Q Consensus 43 ~assI~cYMkE~g~~vteEeA~~~i~~l 70 (126)
.+..+.|||+..| ++.++|+++++..
T Consensus 106 Tg~~~a~~l~~~g--~~~~~a~~~~~~~ 131 (151)
T 1xri_A 106 TGCLVGCLRKLQK--WCLTSIFDEYQRF 131 (151)
T ss_dssp HHHHHHHHHHHTT--BCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHHh
Confidence 3455678999779 9999999877654
No 26
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=25.73 E-value=37 Score=23.95 Aligned_cols=27 Identities=19% Similarity=-0.022 Sum_probs=20.8
Q ss_pred CCCchhhhhhhhcCCccCCHHHHHHHHHH
Q 041958 41 VDASKSIDCYRHEINWHLEEEVARDHIND 69 (126)
Q Consensus 41 G~~assI~cYMkE~g~~vteEeA~~~i~~ 69 (126)
|-.+..+-||+...| ++.++|++.++.
T Consensus 129 gRSg~~va~~L~~~g--~~~~~a~~~vr~ 155 (189)
T 3rz2_A 129 GRAPVLVALALIEGG--MKYEDAVQFIRQ 155 (189)
T ss_dssp TTHHHHHHHHHHTTT--CCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 345566789999779 999999887764
No 27
>3hdf_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosid hydrolase, late protein; 1.70A {Enterobacteria phage P21}
Probab=25.18 E-value=1.4e+02 Score=20.57 Aligned_cols=32 Identities=9% Similarity=0.081 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-------------hHHHHHHHHH
Q 041958 58 LEEEVARDHINDLVRQTWKKIL-------------PYLKLQLNFV 89 (126)
Q Consensus 58 vteEeA~~~i~~lIe~~WKeln-------------~~~~~~lNla 89 (126)
+|+++|..-+..-+...-+.++ ++..+++|+.
T Consensus 41 iT~~ea~~ll~~dl~~~~~~v~~~v~~~l~q~q~dALvSfafNvG 85 (140)
T 3hdf_A 41 YTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFVYNVG 85 (140)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHhcC
Confidence 8999999999999988888776 5556666654
No 28
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=25.03 E-value=39 Score=22.60 Aligned_cols=25 Identities=20% Similarity=0.020 Sum_probs=20.2
Q ss_pred CchhhhhhhhcC-CccCCHHHHHHHHHH
Q 041958 43 ASKSIDCYRHEI-NWHLEEEVARDHIND 69 (126)
Q Consensus 43 ~assI~cYMkE~-g~~vteEeA~~~i~~ 69 (126)
.+..+-||+... | ++.++|++.+++
T Consensus 123 Tg~~~a~~L~~~~~--~~~~~a~~~vr~ 148 (167)
T 3s4o_A 123 APILVALALVEYGN--VSALDAIALIRE 148 (167)
T ss_dssp HHHHHHHHHHHTTC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCHHHHHHHHHH
Confidence 455677888887 8 999999998875
No 29
>4e97_A Lysozyme; hydrolase, alkylation with 2-mercaptoethanol; 1.30A {Enterobacteria phage T4} PDB: 4ekp_A 4ekq_A* 4ekr_A 4eks_A
Probab=24.68 E-value=1.2e+02 Score=21.67 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=25.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHH-------------h-----hHHHHHHHHHhh
Q 041958 57 HLEEEVARDHINDLVRQTWKKI-------------L-----PYLKLQLNFVES 91 (126)
Q Consensus 57 ~vteEeA~~~i~~lIe~~WKel-------------n-----~~~~~~lNlaRv 91 (126)
.+|+++|.+-+.+-|..+-+.+ + +++..+||+...
T Consensus 80 ~it~~~a~~ll~~Dl~~~~~~~~~~~~~~~~~~~l~~~~~~ALvsm~FNlG~~ 132 (187)
T 4e97_A 80 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCAAINHVFQMGVT 132 (187)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHSCHHHHHHHHHHHHHHCHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHheeeeeccCCc
Confidence 3899999998888777666554 3 567777887754
No 30
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=22.26 E-value=56 Score=21.73 Aligned_cols=25 Identities=4% Similarity=-0.075 Sum_probs=18.6
Q ss_pred chhhhhhhhcC-CccCCHHHHHHHHHHH
Q 041958 44 SKSIDCYRHEI-NWHLEEEVARDHINDL 70 (126)
Q Consensus 44 assI~cYMkE~-g~~vteEeA~~~i~~l 70 (126)
++.+-+|+-.+ | .+.++|...++..
T Consensus 96 ~~~v~ayLm~~~~--~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 96 AAIVIGFLMNSEQ--TSFTSAFSLVKNA 121 (144)
T ss_dssp HHHHHHHHHHHHC--CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 45566787654 8 8999999888763
No 31
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=21.61 E-value=38 Score=27.18 Aligned_cols=50 Identities=6% Similarity=0.048 Sum_probs=35.6
Q ss_pred cCCCchhhhhh--hhcCCccCCHHHHHHHHHHHHH-------------HHHHHHh-----hHHHHHHHHHhh
Q 041958 40 RVDASKSIDCY--RHEINWHLEEEVARDHINDLVR-------------QTWKKIL-----PYLKLQLNFVES 91 (126)
Q Consensus 40 rG~~assI~cY--MkE~g~~vteEeA~~~i~~lIe-------------~~WKeln-----~~~~~~lNlaRv 91 (126)
+|-....+-|| |++.+ ++.+|++++++.+-. +.||.-. .+++.|.+.++-
T Consensus 224 ~GRTgt~ma~y~ll~~~~--vs~eeii~r~~~lgg~~~~~~~~~~~~~~~~k~~~~~~r~~fl~~Fy~Y~~~ 293 (314)
T 3mmj_A 224 VGRTTAFMVMTDMLKNPS--VSLKDILYRQHEIGGFYYGEFPIKTKDKDSWKTKYYREKIVMIEQFYRYVQE 293 (314)
T ss_dssp SHHHHHHHHHHHHHHCTT--SCHHHHHHHHHHTTSCCCSCCCCCCCGGGTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCC--CCHHHHHHHHHHhCCcccccccccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 34455566687 45658 999999999987643 5677743 777888887765
No 32
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=21.29 E-value=59 Score=22.25 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=19.7
Q ss_pred Cchhhhhhhhc-CCccCCHHHHHHHHHH
Q 041958 43 ASKSIDCYRHE-INWHLEEEVARDHIND 69 (126)
Q Consensus 43 ~assI~cYMkE-~g~~vteEeA~~~i~~ 69 (126)
.+..+-||+.. .| ++.++|+..++.
T Consensus 127 Tg~~va~~L~~~~~--~~~~~a~~~~r~ 152 (169)
T 1yn9_A 127 TGYMVCRYLMHTLG--IAPQEAIDRFEK 152 (169)
T ss_dssp HHHHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence 34567789988 58 899999988765
No 33
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=20.29 E-value=72 Score=23.90 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=19.5
Q ss_pred CchhhhhhhhcC-CccCCHHHHHHHHHH
Q 041958 43 ASKSIDCYRHEI-NWHLEEEVARDHIND 69 (126)
Q Consensus 43 ~assI~cYMkE~-g~~vteEeA~~~i~~ 69 (126)
.+..|-||+-+. | ++.++|+..++.
T Consensus 155 TGt~ia~yLm~~~~--~s~~eAi~~vr~ 180 (241)
T 2c46_A 155 TGFLICAFLVEKMD--WSIEAAVATFAQ 180 (241)
T ss_dssp HHHHHHHHHHHTTC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence 446778997775 8 899999988764
No 34
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=20.21 E-value=55 Score=21.62 Aligned_cols=26 Identities=19% Similarity=0.019 Sum_probs=19.7
Q ss_pred CCchhhhhhhhcCCccCCHHHHHHHHHH
Q 041958 42 DASKSIDCYRHEINWHLEEEVARDHIND 69 (126)
Q Consensus 42 ~~assI~cYMkE~g~~vteEeA~~~i~~ 69 (126)
-.+..+-+|+...| ++.++|++.++.
T Consensus 109 Rtg~~~a~~l~~~~--~~~~~a~~~vr~ 134 (159)
T 1rxd_A 109 RAPVLVALALIEGG--MKYEDAVQFIRQ 134 (159)
T ss_dssp THHHHHHHHHHHTT--CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence 34455668888788 999999887764
No 35
>2vkc_A NEDD4-binding protein 2; human BCL3 binding protein, alternative splicing, homologous recombination, mismatch repair, small MUTS related; NMR {Homo sapiens}
Probab=20.09 E-value=82 Score=21.62 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=17.9
Q ss_pred cCCccCCHHHHHHHHHHHHHHHH
Q 041958 53 EINWHLEEEVARDHINDLVRQTW 75 (126)
Q Consensus 53 E~g~~vteEeA~~~i~~lIe~~W 75 (126)
=|| .+.+||+..+...|.++.
T Consensus 58 LHG--l~v~EA~~~L~~fL~~a~ 78 (135)
T 2vkc_A 58 LHG--LHVDEALEHLMRVLEKKT 78 (135)
T ss_dssp CTT--CCHHHHHHHHHHHHHHHH
T ss_pred eCC--CcHHHHHHHHHHHHHHHH
Confidence 369 999999999999888763
Done!