BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041961
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 79/116 (68%)
Query: 1 KKIRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMK 60
K I+TF DD+ L G I L AI+ S+ ++VVFS++YA+S+WCLNELVKI++CK
Sbjct: 38 KGIKTFQDDKRLEYGATIPGELCKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRF 97
Query: 61 GQIIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDALTESSHLAG 116
Q +IP+FY V PS VR+Q F F + E ++K+ E +++WR AL E+++L G
Sbjct: 98 KQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 1 KKIRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMK 60
K I TF DD ++R I L AI+ SKISVV+FS++YASS WCL+EL++I+ CK +
Sbjct: 37 KGIVTFRDDH-IKRSHTIGHELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQ 95
Query: 61 GQIIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDALTESSHLAG 116
G ++PVFY V PSD+R QTG FG+ F LE + E WR ALT+++++ G
Sbjct: 96 GLKVMPVFYKVDPSDIRKQTGKFGMSF--LETCCGKTEERQHNWRRALTDAANILG 149
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 2 KIRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMKG 61
K TF+DDE + R I P LL+AI+ S+I++V+FSK+YASS WCLNELV+I C
Sbjct: 38 KAITFIDDE-IERSRSIGPELLSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLN 96
Query: 62 QIIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRK-WRDALTESSHLAGHEST 120
Q++IP+F+ V S+V+ QTG FG F E+ K + E ++ W+ AL + +AG++
Sbjct: 97 QMVIPIFFHVDASEVKKQTGEFGKVF---EETCKAKSEDEKQSWKQALAAVAVMAGYDLR 153
Query: 121 KF 122
K+
Sbjct: 154 KW 155
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 3 IRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMKGQ 62
I F+D +E+ D ++ L IQ S+++VV+FSKDY SS+WCL+EL +I DC N G
Sbjct: 42 INVFIDKDEVVGTDLVN--LFVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGL 99
Query: 63 IIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDALTESSHLAG 116
IP+FY ++PS V G FG F L++++K PE +KW++AL L G
Sbjct: 100 NAIPIFYKLAPSSVLELKGGFGDTFRVLKEKYKNDPERTQKWQEALESIPKLKG 153
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 1 KKIRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMK 60
+KI F+D++E R IS L + I SKI++V+FS+ Y S WC++ELVKI + +
Sbjct: 48 EKINVFIDEQEERGKYLIS--LFDTIGESKIALVIFSEGYCESHWCMDELVKIKEYMDQN 105
Query: 61 GQIIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDAL 108
IIIP+FY + V+ TG FG F L +++ +P+ + KW +AL
Sbjct: 106 RLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEAL 153
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 1 KKIRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMK 60
+KI F D+ ELR G ++ L I+ S+++V +FS+ Y S WCL+ELVK+ +
Sbjct: 384 EKINVFTDEVELR-GTNLN-YLFRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQG 441
Query: 61 GQIIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDALT 109
+++PVFY ++ + + G FG LE +++ +PE ++KW++AL+
Sbjct: 442 KLVVVPVFYRLNATACKRFMGAFGDNLRNLEWEYRSEPERIQKWKEALS 490
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 3 IRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMKGQ 62
I F+D+ E G E++ LL I+ S++++V+FS D+ S CLNEL KI + K+
Sbjct: 43 INVFIDENEFL-GSEMA-NLLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRL 100
Query: 63 IIIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDAL 108
I+IP+FY V PS V+ G FG F LE+ + + +KW++AL
Sbjct: 101 IVIPIFYKVKPSAVKFLEGKFGDNFRALERNNRHMLPITQKWKEAL 146
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 4 RTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMKGQI 63
R V+D + D +S + ++ +++SV++ + S L++LVK+LDC+ K Q+
Sbjct: 30 RKGVNDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVLDCQKNKDQV 86
Query: 64 IIPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKE 96
++PV YGV S+ + + GF + KE
Sbjct: 87 VVPVLYGVRSSETEWLSALDSKGFSSVHHSRKE 119
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 23 LNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMKGQIIIPVFYGVSPSDVRHQTGI 82
++A+ ++ ++V + Y S L+ IL+ ++ + +++ P+FY +SP D +
Sbjct: 706 VDALPKCRVLIIVLTSTYVPSN-----LLNILEHQHTEDRVVYPIFYRLSPYDFVCNS-- 758
Query: 83 FGLGFGKLEQQFKEQPEMVRKWRDALTESSHLAGHEST 120
K ++F Q E +KW+ AL E + + G+ T
Sbjct: 759 ------KNYERFYLQDE-PKKWQAALKEITQMPGYTLT 789
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 1 KKIRTFVDDEELRRGDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMK 60
K I F+D+EE+R G + L IQ SKIS+ +FS+ SK N+L+K N
Sbjct: 68 KNINVFIDEEEVR-GKGLK-NLFKRIQDSKISLAIFSE----SKCDFNDLLK----NNES 117
Query: 61 GQIIIPVFYGVSPS 74
IP+FY V +
Sbjct: 118 ADEAIPIFYKVDAT 131
>sp|A1WGU0|SYL_VEREI Leucine--tRNA ligase OS=Verminephrobacter eiseniae (strain EF01-2)
GN=leuS PE=3 SV=1
Length = 907
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 70 GVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDALTESSH 113
GV P ++ G +G +L F PE +W DA E SH
Sbjct: 659 GVDPQEL---IGKYGADTARLHTMFTAPPEAALEWNDAAVEGSH 699
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 26 IQGSKISVVVFSKDYASSKWCLNELVKILDC-KNMKGQIIIPVFYGVS 72
I+ + +SV+V + S+ L++ K+L+C +N K Q ++ V YG S
Sbjct: 57 IEKAGVSVMVLPGNCDPSEVWLDKFAKVLECQRNNKDQAVVSVLYGDS 104
>sp|B1XXY5|SYL_LEPCP Leucine--tRNA ligase OS=Leptothrix cholodnii (strain ATCC 51168 /
LMG 8142 / SP-6) GN=leuS PE=3 SV=1
Length = 887
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 70 GVSPSDVRHQTGIFGLGFGKLEQQFKEQPEMVRKWRDALTESSH 113
GV P D+ +Q +G +L F PE +W DA E +H
Sbjct: 652 GVDPQDLINQ---YGADTARLFVMFASPPEQTLEWNDAGVEGAH 692
>sp|A6GXG2|GLYA_FLAPJ Serine hydroxymethyltransferase OS=Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511) GN=glyA PE=3 SV=1
Length = 424
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 58 NMKGQIIIPVFYGVSPSDVRHQTGIFGLGFGKLEQ-QFKEQPEMV 101
N G++ P FYGV P +TG+ L + K+++ KEQP+++
Sbjct: 126 NFSGKLYNPTFYGVEP-----ETGM--LNYDKIQEIATKEQPKLI 163
>sp|B2T1M4|GATA_BURPP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=gatA PE=3 SV=1
Length = 495
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 53 ILDCKNMKGQIIIPVFYGVSPSDVRHQTGIF-GLGFGKLEQQFKEQPEMVRKWR 105
++D K ++ IPV+Y ++P++ F G+ FG ++++ +M +K R
Sbjct: 299 LVDVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSR 352
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 28 GSKISVVVFSKDYASSKWCLNELVKILDCKNMKGQIIIPVFYGV 71
G+++ VVV S + + +K++ G +++PVFYGV
Sbjct: 71 GARVLVVVISDEVEFYDPWFPKFLKVIQGWQNNGHVVVPVFYGV 114
>sp|Q75EZ2|BFR2_ASHGO Protein BFR2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=BFR2 PE=3 SV=1
Length = 528
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 8 DDEELRR---GDEISPALLNAIQGSKISVVVFSKDYASSKWCLNELVKILDCKNMKGQII 64
DDE+ R D + +LNA QGS + V + ++ N+L K +D K KG+
Sbjct: 411 DDEDFYRVLLNDLVDKKILNAQQGSNVQVAIKAR-------SQNKLKKNVDTKASKGR-- 461
Query: 65 IPVFYGVSPSDVRHQTGIFGLGFGKLEQQFKE 96
+ Y V ++ I G GF ++Q E
Sbjct: 462 -KLNYSVQEPIANYEAPING-GFKWSDEQIDE 491
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,878,510
Number of Sequences: 539616
Number of extensions: 1674446
Number of successful extensions: 3862
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3849
Number of HSP's gapped (non-prelim): 21
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)