BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041965
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPG+ NPLDGT + +S F+Y++KIVPT Y + +VL
Sbjct: 242 GLDNINMTHEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVL 301
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V E+ RSF H +T +CA++GG
Sbjct: 302 RTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGV 361
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 362 FTVAGLIDSLIYYSTRAIQK 381
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL
Sbjct: 235 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 294
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 295 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 354
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 355 FTVAGLIDSLIYHSARAIQK 374
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL
Sbjct: 236 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL
Sbjct: 236 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPG+ NPLDG+ +S F+Y++KIVPT Y + +VL
Sbjct: 237 GLDNINMTHEIRHLSFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVL 296
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 297 RTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGV 356
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 357 FTVAGLIDSLVYYSTRAIQK 376
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL
Sbjct: 236 GLDNINMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL
Sbjct: 236 GLDNINMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 296 RTNQFSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Query: 21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
G N+N++H I LSFG YPGI NPLD T S ++Y++KIVPT Y +V+
Sbjct: 236 GLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVV 295
Query: 81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
TNQFSVT + N D+ P V+ LY+LSP+ V E++RSF H +T +CA++GG
Sbjct: 296 KTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGV 355
Query: 139 FALTGMLDRWMYRLLEALTK 158
F + G++D +Y A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 3/136 (2%)
Query: 26 NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQF 85
NVSH I+ LSFG +PGI NPLD + G F+Y++K+VPT Y ++ + + TNQ+
Sbjct: 240 NVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQY 299
Query: 86 SVTEYF---STFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 142
SVTE++ + E P ++F+YDLSPI + + E +SF +T +CA++GG F +
Sbjct: 300 SVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVF 359
Query: 143 GMLDRWMYRLLEALTK 158
G+ D ++Y + L K
Sbjct: 360 GIFDSFIYYSTKNLQK 375
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Query: 26 NVSHVIHDLSFGPK-----YPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
+++H+IH L+FG K G N L G R+ + + Y +KIVPT Y +
Sbjct: 145 DMTHIIHKLAFGAKLQVQHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQR 204
Query: 81 PTNQFSVT-EYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTF 139
+ Q++V + + ++ R PA++F YDLSPITV E RR F IT +CA++GGTF
Sbjct: 205 FSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTF 264
Query: 140 ALTGMLDRWMYRLLEALTK 158
+ G++D ++ EA K
Sbjct: 265 TVAGIIDSCIFTASEAWKK 283
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Query: 26 NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTN 83
N SH I LSFG PGI NPLDGT ++ D + F+Y+I +VPT+ IS D T+
Sbjct: 212 NFSHRIDHLSFGELVPGIINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISAD---TH 268
Query: 84 QFSVTEYFSTFNEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFAL 141
QFSVTE N + ++ YDLS + VT+ EE F RLC ++GG F+
Sbjct: 269 QFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFST 328
Query: 142 TGML 145
TGML
Sbjct: 329 TGML 332
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Query: 26 NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTN 83
N SH I LSFG PGI NPLDGT ++ D + F+Y+I +VPT+ IS D T+
Sbjct: 212 NFSHRIDHLSFGELVPGIINPLDGTEKIALDHNQMFQYFITVVPTKLHTYKISAD---TH 268
Query: 84 QFSVTEYFSTFNEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFAL 141
QFSVTE N + ++ YDLS + VT+ EE F RLC ++GG F+
Sbjct: 269 QFSVTERERVINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFST 328
Query: 142 TGML 145
TGML
Sbjct: 329 TGML 332
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 23 KNVNVSHVIHDLSFGP--KYPGIH---NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
+N +++HVIH LSFG + IH N L G R+ + + Y +KIVPT Y S
Sbjct: 142 QNPDMTHVIHKLSFGDTLQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSG 201
Query: 78 DVLPTNQFSV-TEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 136
+ Q++V + + ++ R PA++F YDLSPITV E R+ IT +CA++G
Sbjct: 202 KQRYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIG 261
Query: 137 GTFALTGMLDRWMYRLLEALTK 158
GTF + G+LD ++ EA K
Sbjct: 262 GTFTVAGILDSCIFTASEAWKK 283
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
Query: 23 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVL 80
++ N SH I LSFG P I NPLDGT ++ D + F+Y+I +VPT+ IS D
Sbjct: 209 ESYNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD-- 266
Query: 81 PTNQFSVTEYFSTFNEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
T+QFSVTE N + ++ YDLS + VT+ EE F RLC ++GG
Sbjct: 267 -THQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGI 325
Query: 139 FALTGML 145
F+ TGML
Sbjct: 326 FSTTGML 332
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
Query: 23 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVL 80
++ N SH I LSFG P I NPLDGT ++ D + F+Y+I +VPT+ IS D
Sbjct: 209 ESYNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD-- 266
Query: 81 PTNQFSVTEYFSTFNEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
T+QFSVTE N + ++ YDLS + VT+ EE F RLC ++GG
Sbjct: 267 -THQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGI 325
Query: 139 FALTGML 145
F+ TGML
Sbjct: 326 FSTTGML 332
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 26 NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQF 85
N SH I LSFG + PGI NPLDGT ++ D + F+Y+I IVPT+ + K T+Q+
Sbjct: 211 NFSHRIDHLSFGEEIPGILNPLDGTEKVSADHNQMFQYFITIVPTKLQ-TYKVYADTHQY 269
Query: 86 SVTEYFSTFNEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTG 143
SVTE N + ++ YD+S + V + E+ F + RLC ++GG F+ TG
Sbjct: 270 SVTERERVINHAAGSHGVSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGGIFSTTG 329
Query: 144 ML 145
ML
Sbjct: 330 ML 331
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 23 KNVNVSHVIHDLSFGPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
+N +++H IH LSFG G N L G R+ + + Y +KIVPT Y S
Sbjct: 142 QNPDMTHTIHKLSFGDTLQVQNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSG 201
Query: 78 DVLPTNQFSV-TEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 136
+ Q++V + + ++ R PA++F YDLSPITV E R+ IT +CA++G
Sbjct: 202 KQRYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIG 261
Query: 137 GTFALTGMLDRWMYRLLEALTK 158
GTF + G+LD ++ EA K
Sbjct: 262 GTFTVAGILDSCIFTASEAWKK 283
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 24 NVNVSHVIHDLSFGP--KYPGIH---NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKD 78
N ++ H+IH LSFG + IH N L G ++ + Y +KIVPT Y ++
Sbjct: 143 NPDMRHIIHKLSFGNTLQVDNIHGAFNALGGADKLASKALESHDYVLKIVPTVYEDLNGK 202
Query: 79 VLPTNQFSVT-EYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
+ Q++V + + ++ R PA++F YDLSPITV E R+ IT +CA++GG
Sbjct: 203 QQFSYQYTVANKAYVAYSHTGRVVPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGG 262
Query: 138 TFALTGMLDRWMYRLLEALTK 158
TF + G+LD +++ EA K
Sbjct: 263 TFTVAGILDSFIFTASEAWKK 283
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 17/144 (11%)
Query: 26 NVSHVIHDLSFGPKYPG-IH--NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP- 81
++SH IH LSFGP +H NPLDGTV+ + ++Y+IK V ++ +SK LP
Sbjct: 241 DMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPI 300
Query: 82 -TNQFSVTEY-----------FSTFNEFDRTWPAVYFLYDLSPITVTIKEER-RSFLHLI 128
TN+++VT++ T F P V+F +D+SP+ V ++ R +F +
Sbjct: 301 DTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQVRGNTFGGFL 360
Query: 129 TRLCAVLGGTFALTGMLDRWMYRL 152
+ + A+LGG L +DR Y +
Sbjct: 361 SNVLALLGGCVTLASFVDRGYYEV 384
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 23 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTS-GTFKYYIKIVPTEYRYISKDVLP 81
+ + +HVI++ SFG YP I NPLD T + D T+ YY +VPT ++ + +V
Sbjct: 195 EELKFNHVINEFSFGDFYPYIDNPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKLGAEV-D 253
Query: 82 TNQFSVTEYFSTFNEF----DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
TNQ+SV +Y + + D+ P ++F Y+ P+++ + + R SF+ + RL A+
Sbjct: 254 TNQYSVNDYRYLYKDVAAKGDKM-PGIFFKYNFEPLSIVVSDVRLSFIQFLVRLVAIC-- 310
Query: 138 TFALTGMLDRWMYRLLE 154
+ W++ LL+
Sbjct: 311 --SFLVYCASWIFTLLD 325
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 24 NVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTN 83
++N +H I +LSFG YP + N LDG +D F+YY+ ++PT Y+ S TN
Sbjct: 185 SLNFTHYIEELSFGEYYPALVNALDGHYGHANDHPFAFQYYLSVLPTSYKS-SFRSFETN 243
Query: 84 QFSVTEYFSTFNE--FDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFAL 141
Q+S+TE S + F P ++ YDL P+ V + ++ + + R+ A+ GG +
Sbjct: 244 QYSLTEN-SVVRQLGFGSLPPGIFIDYDLEPLAVRVVDKHPNVASTLLRILAISGGLITV 302
Query: 142 TGMLDR 147
++R
Sbjct: 303 ASWIER 308
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 22 AKNVNVSHVIHDLSFGPK--------------YPGI-HNPLDGTVRMLHDTSG---TFKY 63
+ +N+SHV++ LSFG + Y G+ H+ LDG + G T ++
Sbjct: 322 SSQMNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEH 381
Query: 64 YIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRS 123
Y++IV TE + L + T + S + + P F ++LSP+ V I E +S
Sbjct: 382 YLQIVKTEVVKSNGQAL-VEAYEYTAHSSVAHSY--YLPVAKFHFELSPMQVLITENSKS 438
Query: 124 FLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 158
F H IT +CA++GG F + G+LD ++ + + K
Sbjct: 439 FSHFITNVCAIIGGVFTVAGILDSILHHSMTLMKK 473
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 24 NVNVSHVIHDLSFG---------------PKYPGIHNPLDGTVRMLH----DTSGTFKYY 64
+NVSH + SFG P G H+ L G ++ + + T ++Y
Sbjct: 325 QINVSHYVTQFSFGKRLSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHY 384
Query: 65 IKIVPTEYRYI--SKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERR 122
++IV TE + SK++ ++ T + S + F P V F ++ SP+ V + E +
Sbjct: 385 LQIVKTELVTLRSSKELKLVEEYEYTAHSSLVHSF--YVPVVKFHFEPSPMQVLVTELPK 442
Query: 123 SFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 158
SF H IT +CA++GG F + G+LD + L + K
Sbjct: 443 SFSHFITNVCAIIGGVFTVAGILDSIFHNTLRLVKK 478
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 22 AKNVNVSHVIHDLSFG----PK----------YPGI-HNPLDGTVRMLHDTSG---TFKY 63
+ +N+SHV+ SFG P+ Y G+ H+ LDG + G T ++
Sbjct: 322 SSQMNMSHVVSHFSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEH 381
Query: 64 YIKIVPTEY--RYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEER 121
Y++ V TE R ++ ++ T + S + P F ++LSP+ + I E
Sbjct: 382 YLQTVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTY--YLPVAKFHFELSPMQILITENP 439
Query: 122 RSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 158
+SF H IT LCA++GG F + G+LD + + + K
Sbjct: 440 KSFSHFITNLCAIIGGVFTVAGILDSIFHNTVRLVKK 476
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 34/171 (19%)
Query: 18 IFGGAKNVNVSHVIHDLSFGP-------------KYPGI---HNPLDGTVRMLHDTSGT- 60
++ N+N +H+I+ LSFG ++ G +PLDG R + T
Sbjct: 241 LYDKTSNLNFNHIINHLSFGKPIQSHSKLLGNDKRHGGAVVATSPLDG--RQVFPDRNTH 298
Query: 61 ---FKYYIKIVPTEYRYISKDVLPTNQFSVTEY---FSTFNEFDR--------TWPAVYF 106
F Y+ KIVPT Y Y+ V+ T QFS T + + + D P ++
Sbjct: 299 FHQFSYFAKIVPTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGMFV 358
Query: 107 LYDLSPITVTIKEER-RSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 156
+++SP+ V KE+ +++ I +GG A+ ++D+ Y+ ++
Sbjct: 359 FFEMSPLKVINKEQHGQTWSGFILNCITSIGGVLAVGTVMDKLFYKAQRSI 409
>sp|Q5KYR3|IOLC_GEOKA 5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain
HTA426) GN=iolC PE=3 SV=1
Length = 335
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Query: 25 VNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP 81
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 85 IDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLLI 144
Query: 82 TNQF-----SVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 136
+ S F + R V F D P T KEE + +L C V+
Sbjct: 145 SGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKEETAIYYNLAAEKCDVII 204
Query: 137 GTFALTGMLDRW 148
GT M++R+
Sbjct: 205 GTREEFDMMERF 216
>sp|A4IPB3|IOLC_GEOTN 5-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=iolC PE=3 SV=1
Length = 337
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Query: 25 VNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP 81
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 85 IDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIHEDYIRQAKCLLI 144
Query: 82 TNQF-----SVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 136
+ S F R V+F D P T KEE + +L C V+
Sbjct: 145 SGTALAKSPSREAVFLALEYARRHGVVVFFDLDYRPYTWQSKEETAIYYNLAAEKCDVII 204
Query: 137 GTFALTGMLDRW 148
GT M++++
Sbjct: 205 GTREEFDMMEQF 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,408,696
Number of Sequences: 539616
Number of extensions: 2857605
Number of successful extensions: 6778
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6719
Number of HSP's gapped (non-prelim): 32
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)