BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041968
         (87 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
          4'-O-Methyltransferase Complexed With Sah And
          2,7,4'-Trihydroxyisoflavanone
          Length = 358

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 49/67 (73%)

Query: 21 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCI 80
          EL  AQ  ++   +N+++SM+LK A+ELGI D IH HG+PMTLS++AS+L +  +K + +
Sbjct: 6  ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 65

Query: 81 QRLMRIL 87
           R +R+L
Sbjct: 66 HRFLRLL 72


>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
          Complexed With (+)-6a-hydroxymaackiain
 pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
          Isoflavanone 4'-O- Methyltransferase
          Length = 357

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 49/67 (73%)

Query: 21 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCI 80
          EL  AQ  ++   +N+++SM+LK A+ELGI D IH HG+PMTLS++AS+L +  +K + +
Sbjct: 5  ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 64

Query: 81 QRLMRIL 87
           R +R+L
Sbjct: 65 HRFLRLL 71


>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
          Complexed With (+)-Pisatin
          Length = 354

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 49/67 (73%)

Query: 21 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCI 80
          EL  AQ  ++   +N+++SM+LK A+ELGI D IH HG+PMTLS++AS+L +  +K + +
Sbjct: 2  ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 61

Query: 81 QRLMRIL 87
           R +R+L
Sbjct: 62 HRFLRLL 68


>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
          Homolog In Complex With Biochanin A And Sah
 pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
          Homolog In Complex With Biochanin A And Sah
          Length = 357

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 47/67 (70%)

Query: 21 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCI 80
          E+ KAQA ++   + +++SMSLK ++E+ IP++IH HG+P+TLS + S L I   K   +
Sbjct: 12 EIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDNV 71

Query: 81 QRLMRIL 87
          QRLMR L
Sbjct: 72 QRLMRYL 78


>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
          O-Methyltransferase
          Length = 352

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 47/67 (70%)

Query: 21 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCI 80
          E+ KAQA ++   + +I+SMSLK AVE+ IP++I  HG+P++LS + S L +  +K   +
Sbjct: 12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV 71

Query: 81 QRLMRIL 87
          +RLMR L
Sbjct: 72 RRLMRYL 78


>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine
          Substituted Isoflavone O-Methyltransferase
          Length = 352

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 44/67 (65%)

Query: 21 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCI 80
          E+ KAQA ++   + +I+S SLK AVE  IP++I  HG+P++LS + S L +  +K   +
Sbjct: 12 EIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV 71

Query: 81 QRLMRIL 87
          +RL R L
Sbjct: 72 RRLXRYL 78


>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
          Sah
 pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Sinapaldehyde
 pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Coniferaldehyde
 pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Coniferaldehyde
 pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Coniferaldehyde
 pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
          With S- Adenosyl-L-Homocysteine And Coniferaldehyde
          Length = 364

 Score = 26.9 bits (58), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 40 MSLKCAVELGIPDV-IHKHGQPMTLSQIASALDIQKN--KAHCIQRLMRIL 87
          M+LK A+ELG+ ++ +   G+ +T +++A+ L    N      + R++R+L
Sbjct: 35 MTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLL 85


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.324    0.132    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,863,302
Number of Sequences: 62578
Number of extensions: 46663
Number of successful extensions: 164
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 158
Number of HSP's gapped (non-prelim): 7
length of query: 87
length of database: 14,973,337
effective HSP length: 55
effective length of query: 32
effective length of database: 11,531,547
effective search space: 369009504
effective search space used: 369009504
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)