Query 041969
Match_columns 209
No_of_seqs 130 out of 1102
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 12:35:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041969.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041969hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00140 alcohol acetyltransfe 100.0 7.2E-43 1.6E-47 313.9 19.0 194 5-208 1-199 (444)
2 PLN03157 spermidine hydroxycin 100.0 9.9E-43 2.1E-47 313.2 19.3 186 5-203 1-190 (447)
3 PF02458 Transferase: Transfer 100.0 3.3E-42 7.1E-47 307.2 15.0 189 5-205 1-194 (432)
4 PLN02663 hydroxycinnamoyl-CoA: 100.0 1.5E-40 3.4E-45 297.6 19.2 183 5-202 1-188 (431)
5 PLN02481 Omega-hydroxypalmitat 100.0 3.7E-40 8.1E-45 295.7 18.8 184 5-202 12-201 (436)
6 PRK09294 acyltransferase PapA5 97.5 0.0015 3.3E-08 58.2 11.6 126 26-179 6-140 (416)
7 PF03007 WES_acyltransf: Wax e 97.2 0.0056 1.2E-07 51.6 10.7 126 40-178 18-157 (263)
8 PF00668 Condensation: Condens 97.1 0.0032 7E-08 52.2 8.5 140 27-180 4-159 (301)
9 TIGR02946 acyl_WS_DGAT acyltra 96.9 0.0036 7.9E-08 56.3 8.1 137 30-178 1-151 (446)
10 COG4908 Uncharacterized protei 96.9 0.0044 9.5E-08 55.0 7.8 130 33-180 18-156 (439)
11 PRK10252 entF enterobactin syn 94.5 0.37 8.1E-06 48.9 11.1 115 58-180 42-163 (1296)
12 PRK12467 peptide synthase; Pro 94.2 0.5 1.1E-05 53.6 11.9 115 58-180 1151-1270(3956)
13 PRK12467 peptide synthase; Pro 94.1 0.45 9.8E-06 53.9 11.6 114 58-180 2680-2801(3956)
14 PRK05691 peptide synthase; Val 92.9 0.36 7.8E-06 55.1 8.4 113 58-179 3292-3413(4334)
15 PRK12316 peptide synthase; Pro 91.7 1.1 2.4E-05 52.1 10.2 114 58-180 84-205 (5163)
16 PRK05691 peptide synthase; Val 91.3 0.76 1.6E-05 52.6 8.4 116 58-179 1763-1883(4334)
17 PRK12316 peptide synthase; Pro 90.9 1.3 2.8E-05 51.6 9.8 112 58-179 2637-2753(5163)
18 PF07247 AATase: Alcohol acety 90.7 0.68 1.5E-05 42.1 6.4 43 139-181 126-172 (480)
19 PRK13757 chloramphenicol acety 79.5 2.2 4.8E-05 35.2 3.4 29 150-178 185-213 (219)
20 PF00302 CAT: Chloramphenicol 78.8 2 4.4E-05 35.0 2.9 40 133-173 163-205 (206)
21 PRK11856 branched-chain alpha- 73.5 3.4 7.4E-05 37.1 3.2 29 150-178 375-403 (411)
22 PRK11855 dihydrolipoamide acet 68.1 5.3 0.00011 37.4 3.3 29 150-178 512-540 (547)
23 PRK11854 aceF pyruvate dehydro 57.5 11 0.00023 36.0 3.3 30 150-179 598-627 (633)
24 PF00198 2-oxoacid_dh: 2-oxoac 54.5 16 0.00034 30.3 3.5 30 150-179 196-225 (231)
25 PLN02528 2-oxoisovalerate dehy 50.6 16 0.00035 33.0 3.2 30 150-179 378-407 (416)
26 PRK11857 dihydrolipoamide acet 50.3 17 0.00036 31.5 3.1 30 150-179 270-299 (306)
27 TIGR01349 PDHac_trf_mito pyruv 49.7 16 0.00036 33.2 3.1 30 150-179 400-429 (435)
28 PRK14843 dihydrolipoamide acet 47.6 19 0.00041 31.7 3.1 30 150-179 312-341 (347)
29 PTZ00144 dihydrolipoamide succ 47.3 20 0.00043 32.5 3.2 30 150-179 381-410 (418)
30 TIGR01347 sucB 2-oxoglutarate 45.8 22 0.00048 32.0 3.3 30 150-179 366-395 (403)
31 PRK05704 dihydrolipoamide succ 45.0 22 0.00048 32.0 3.1 29 151-179 371-399 (407)
32 TIGR01348 PDHac_trf_long pyruv 43.2 26 0.00056 32.9 3.4 30 150-179 511-540 (546)
33 COG4845 Chloramphenicol O-acet 41.8 33 0.00072 28.0 3.3 47 133-179 165-213 (219)
34 PLN02226 2-oxoglutarate dehydr 41.0 27 0.00058 32.1 3.0 30 150-179 426-455 (463)
35 TIGR02927 SucB_Actino 2-oxoglu 40.8 28 0.0006 33.0 3.2 29 151-179 553-581 (590)
36 PLN02744 dihydrolipoyllysine-r 38.0 30 0.00064 32.5 2.9 30 150-179 504-533 (539)
37 KOG0558 Dihydrolipoamide trans 34.0 45 0.00097 29.6 3.1 29 150-178 436-464 (474)
No 1
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=100.00 E-value=7.2e-43 Score=313.90 Aligned_cols=194 Identities=40% Similarity=0.739 Sum_probs=165.5
Q ss_pred ceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCC--chhHHHHHHHHHHHhhccccccCceec
Q 041969 5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVK--SYQISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
|+|++++++.|+|+.|++.+...++||+||+.+++.|++.+|||+.+.+.+ ...++++||+||+++|++||||||||+
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~ 80 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVK 80 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCcccc
Confidence 689999999999999988766789999999988899999999999765322 246789999999999999999999999
Q ss_pred CCeEEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCcccc--CCcCCCCCCeeEEEEEEecCCcEEEEeccceec
Q 041969 83 DDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAE--SSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKL 160 (209)
Q Consensus 83 ~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~~~~--~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v 160 (209)
.+++|.||++||.|+||+++.+++|+...++...+..|+|..... .+ ....|++.+|||+|+|||++||+++||++
T Consensus 81 ~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~--~~~~Pll~vQvT~F~cGG~~lG~~~~H~v 158 (444)
T PLN00140 81 DNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESD--PEAIPQVAIQVNTFDCGGIALGLCFSHKI 158 (444)
T ss_pred CCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCC--ccCCceEEEEEEEeccCcEEEEeeeceEc
Confidence 889999999999999999999999997666555567788864211 12 14479999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHhcCCCCccccccCcccCCccccc-ccCCCCCC
Q 041969 161 IDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAA-TFFPASES 208 (209)
Q Consensus 161 ~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~-~~~~~~~~ 208 (209)
+||.|+.+|+++||++|||.. .....|.|||+ .++||++.
T Consensus 159 ~Dg~s~~~Fl~~WA~~~rg~~--------~~~~~P~~dr~~~~~p~~~~ 199 (444)
T PLN00140 159 IDAATASAFLDSWAANTRGHY--------SEVINPDLFEASSFFPPLNS 199 (444)
T ss_pred ccHHHHHHHHHHHHHHhcCCC--------CCCCCcccccccccCCCCCc
Confidence 999999999999999999872 22346999997 56788754
No 2
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=9.9e-43 Score=313.16 Aligned_cols=186 Identities=28% Similarity=0.407 Sum_probs=158.7
Q ss_pred ceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec--
Q 041969 5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK-- 82 (209)
Q Consensus 5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~-- 82 (209)
|.|+|++++.|+|+.|++. +.++||+||+..++.|++.+|||+.+...+...++++||+||+++|.+||||||||+
T Consensus 1 ~~v~~~~~~~v~Ps~ptp~--~~~~LS~lD~~~~~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~ 78 (447)
T PLN03157 1 MVVILKASYTVKPAKPTWT--GRRSLSEWDQVGTITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWI 78 (447)
T ss_pred CeEEEeccEEECCCCCCCC--CccCCChhhhccccccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEc
Confidence 5799999999999999875 479999999988899999999998654322345689999999999999999999997
Q ss_pred --CCeEEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceec
Q 041969 83 --DDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKL 160 (209)
Q Consensus 83 --~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v 160 (209)
++++|+||++||+|+||+++++++|+....+...+..|+|......+. ...|++.+|+|.|.|||++||+++||++
T Consensus 79 ~~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~~~~~~~~~l~P~~~~~~~~--~~~Pll~vQvT~F~cGG~~lg~~~~H~v 156 (447)
T PLN03157 79 GGGRLELECNAMGVLLIEAESEAKLDDFGDFSPTPEFEYLIPSVDYTKPI--HELPLLLVQLTKFSCGGISLGLGISHAV 156 (447)
T ss_pred CCCcEEEEECCCCeEEEEEEeCCcHHHhhccCCCHHHHhhcCCCCccccc--ccCceEEEEEEEecCCCEEEEEEeeccc
Confidence 489999999999999999999999997643334456788865322222 4579999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHhcCCCCccccccCcccCCcccccccC
Q 041969 161 IDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFF 203 (209)
Q Consensus 161 ~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~~ 203 (209)
+||.|+.+|+++||++|||. ....+|+|||+.+.
T Consensus 157 ~Dg~~~~~fl~aWA~~~rg~---------~~~~~P~~dR~~l~ 190 (447)
T PLN03157 157 ADGQSALHFISEWARIARGE---------PLGTVPFLDRKVLR 190 (447)
T ss_pred cchHhHHHHHHHHHHHhcCC---------CCCCCCccCccccc
Confidence 99999999999999999997 34457999998664
No 3
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=100.00 E-value=3.3e-42 Score=307.15 Aligned_cols=189 Identities=39% Similarity=0.683 Sum_probs=152.0
Q ss_pred ceEEEEeeeEEecCCCCCCCCccccCCccc-ccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCcee--
Q 041969 5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMD-QITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRL-- 81 (209)
Q Consensus 5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD-~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl-- 81 (209)
|+|+|.++++|+|+.+++.+ .++||+|| +++...|++.+|||+.+.+.....+++.||+||+++|++||+|||||
T Consensus 1 m~v~v~~~~~V~Ps~~tp~~--~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~~lAGrl~~ 78 (432)
T PF02458_consen 1 MKVTVLSRSLVKPSSPTPPH--TLPLSNLDLQLMPPYYVPVLLFYRPPSSSDDSDIVDNLKESLSKTLVHYYPLAGRLRD 78 (432)
T ss_dssp ---EEEEECEEE-STTS-TC--EEE--HHHHHCCGCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHTTSGGGGSEEES
T ss_pred CCCEEecCEEEECCCCCCCC--cccCchhhcCcccccEEEEEEEecCccccccchHHHHHHHHHHHhHhhCcccCcEEcc
Confidence 79999999999999988764 89999999 77788999999999988764444569999999999999999999999
Q ss_pred -cCCeEEEeCCCCceEEEEeeccchhhhcCCC-ChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEecccee
Q 041969 82 -KDDFSIVCNDQGAEYVEALANGFLSEYLQKP-DQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHK 159 (209)
Q Consensus 82 -~~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p-~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~ 159 (209)
.++++|.|||+||+|++|+++.+++|+.... +......|+|......+. ...|++.+|+|+|+|||++||+++||.
T Consensus 79 ~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~~~~~~~~~~~~l~p~~~~~~~~--~~~Pll~vQvt~f~~GG~~lg~~~~H~ 156 (432)
T PF02458_consen 79 PDGRLEIDCNDDGVEFVEAEADGTLDDLLDLEPPSEFLRDLVPQLPVSSEG--EDAPLLAVQVTRFKCGGLALGVSFHHA 156 (432)
T ss_dssp SCTTTEEEECTTTEEEEEEEESS-HHHHCSSSCCGGGGGGGSSS-SSSEEE--TTEBSEEEEEEEETTTEEEEEEEEETT
T ss_pred cccceEEEEecCCCEEEEEecccceeeccccccchHHHHHHhhhcccCCcc--cccceeEeeeeeecccceeeeeeceec
Confidence 4689999999999999999999999998754 444556777765322222 458999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhcCCCCccccccCcccCCcccccccCCC
Q 041969 160 LIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFPA 205 (209)
Q Consensus 160 v~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~~~~ 205 (209)
++||.|+..|+++||++|||. .....+|.|||+.++++
T Consensus 157 v~Dg~~~~~fl~~wa~~~rg~--------~~~~~~p~~~r~~~~~~ 194 (432)
T PF02458_consen 157 VADGTGFSQFLKAWAEICRGG--------SPPSPPPVFDRSLLLPP 194 (432)
T ss_dssp T--HHHHHHHHHHHHHHHHTT--------CHHHHHHCHSSTTSS-S
T ss_pred cCcccchhHHHHHHHhhhcCC--------cccccccccchHHhhhc
Confidence 999999999999999999998 24556799999988766
No 4
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=100.00 E-value=1.5e-40 Score=297.60 Aligned_cols=183 Identities=29% Similarity=0.492 Sum_probs=155.4
Q ss_pred ceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec--
Q 041969 5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK-- 82 (209)
Q Consensus 5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~-- 82 (209)
|+|+|++++.|+|+.|++. ++++||+||+.+++.|++.+|||+.+.+.+ ....++||+||+++|.+||+|||||+
T Consensus 1 ~~v~~~~~~~V~Ps~ptp~--~~~~LS~lD~~~~~~~~~~v~fY~~~~~~~-~~~~~~Lk~sLs~~L~~~yplaGRl~~~ 77 (431)
T PLN02663 1 MIINVRESTMVRPAEETPR--RGLWNSNVDLVVPRFHTPSVYFYRPTGASN-FFDPQVMKEALSKALVPFYPMAGRLRRD 77 (431)
T ss_pred CeEEEcCcEEECCCCCCCC--CcccCChhhcccccccccEEEEEcCCCCCC-ccCHHHHHHHHHHHHhhccccceeeeEC
Confidence 6899999999999998875 589999999998899999999999764321 22358999999999999999999998
Q ss_pred --CCeEEEeCCCCceEEEEeeccchhhhcCC-CChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEecccee
Q 041969 83 --DDFSIVCNDQGAEYVEALANGFLSEYLQK-PDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHK 159 (209)
Q Consensus 83 --~~~~I~~~~~gv~f~~a~~d~~l~~l~~~-p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~ 159 (209)
++++|.|+++||.|++|+++++++|+... +. ...+.|+|......+. .+.|++.+|+|+|.|||++||+++||+
T Consensus 78 ~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~~~~~-~~~~~l~P~~~~~~~~--~~~P~l~vQvt~F~cGG~~lg~~~~H~ 154 (431)
T PLN02663 78 EDGRIEIDCNAEGVLFVEADTPSVIDDFGDFAPT-LELRQLIPTVDYSGGI--SSYPLLVLQVTHFKCGGVSLGVGMQHH 154 (431)
T ss_pred CCCCEEEEECCCCceEEEEecCCCHHHhhccCCC-HHHHhhcCCCCCcccc--ccCceEEEEEEEeccCCEEEEEEeccc
Confidence 37999999999999999999999998763 33 3345678764211122 457999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhcCCCCccccccCcccCCccccccc
Q 041969 160 LIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATF 202 (209)
Q Consensus 160 v~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~ 202 (209)
++||.|+.+|+++||++|||. ....+|+|||+.+
T Consensus 155 v~Dg~g~~~fl~awa~~~rg~---------~~~~~p~~dr~~l 188 (431)
T PLN02663 155 AADGFSGLHFINTWSDMARGL---------DLTIPPFIDRTLL 188 (431)
T ss_pred ccchHHHHHHHHHHHHHhcCC---------CCCCCCccCcccc
Confidence 999999999999999999997 3455799999854
No 5
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=100.00 E-value=3.7e-40 Score=295.67 Aligned_cols=184 Identities=32% Similarity=0.471 Sum_probs=157.0
Q ss_pred ceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec--
Q 041969 5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK-- 82 (209)
Q Consensus 5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~-- 82 (209)
+.|++.+++.|+|+.|++. ++++||+||+.++ .|++.+|||+.++..+...++++||+||+++|.+||+|||||+
T Consensus 12 ~~v~~~~~~~V~Ps~ptp~--~~~~LS~lD~~~~-~~~~~~~fy~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRL~~~ 88 (436)
T PLN02481 12 LVVKQKEPELVPPAEETPK--GLYFLSNLDQNIA-VIVRTVYCFKSEERGSNEDPVDVIKKALSKVLVHYYPLAGRLTIS 88 (436)
T ss_pred eEEEEcCCEEeCCCCCCCC--CceecCccccCcc-eeeeEEEEECCCCcccccCHHHHHHHHHHHHhccccCCCCeeeeC
Confidence 7899999999999998875 5899999999764 7999999999876433456899999999999999999999997
Q ss_pred --CCeEEEeCCCCceEEEEeeccchhhhcC--CCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccce
Q 041969 83 --DDFSIVCNDQGAEYVEALANGFLSEYLQ--KPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHH 158 (209)
Q Consensus 83 --~~~~I~~~~~gv~f~~a~~d~~l~~l~~--~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H 158 (209)
++++|.|+++||.|++|+++.+++|+.. .|+...+..|+|..+...+. ...|++.+|+|.|.|||++||+++||
T Consensus 89 ~~g~~~i~c~~~Gv~fvea~~d~~l~~l~~~~~p~~~~~~~l~~~~~~~~~~--~~~Pll~vQvT~F~~GG~~lg~~~~H 166 (436)
T PLN02481 89 SEGKLIVDCTGEGVVFVEAEANCSIEEIGDITKPDPETLGKLVYDVPGAKNI--LEIPPLTAQVTRFKCGGFVLGLCMNH 166 (436)
T ss_pred CCCcEEEEEcCCCeEEEEEEecCcHHHhccccCCCCHHHHHhCCCCCCcccc--cccceeeeccceEecCcEEEEEEecc
Confidence 5799999999999999999999999965 34444456677654221122 45799999999999999999999999
Q ss_pred eccchhhHHHHHHHHHHHHhcCCCCccccccCcccCCccccccc
Q 041969 159 KLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATF 202 (209)
Q Consensus 159 ~v~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~ 202 (209)
.++||.|+.+|+++||++|||. ....+|++||+.+
T Consensus 167 ~v~Dg~g~~~fl~~WA~~~rg~---------~~~~~p~~dr~~l 201 (436)
T PLN02481 167 CMFDGIGAMEFVNSWGETARGL---------PLSVPPFLDRSIL 201 (436)
T ss_pred ccccHHHHHHHHHHHHHHhcCC---------CCCCCCCcCcccC
Confidence 9999999999999999999997 3445799999855
No 6
>PRK09294 acyltransferase PapA5; Provisional
Probab=97.49 E-value=0.0015 Score=58.22 Aligned_cols=126 Identities=14% Similarity=0.199 Sum_probs=78.4
Q ss_pred ccccCCccccccc--ccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec---C-CeEEEeCC---CCceE
Q 041969 26 RNFKLSLMDQITF--PIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK---D-DFSIVCND---QGAEY 96 (209)
Q Consensus 26 ~~~~LS~lD~~~~--~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---~-~~~I~~~~---~gv~f 96 (209)
-+++|++...+.+ +.|+...+-++.. ...+.|+++|.+++.++|.|..++. + .+.+.... ..+.+
T Consensus 6 ~~~~L~~~~~~f~~~~~~~~~~~~l~g~------lD~~~L~~Al~~l~~rhp~Lr~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (416)
T PRK09294 6 VIRKLAPSEEVFARYEAFTGYTAHLRGV------LDIDALSDAFDALLRAHPVLAAHLEQDSDGGWELVADDLLHPGIVV 79 (416)
T ss_pred cccCCchHHhhhhccCceEEEEEEEcCC------CCHHHHHHHHHHHHHhCHHhhEEEEECCCCceEEeeCCcCCCCeEE
Confidence 3677777776654 3555654444443 3489999999999999999999994 1 22222221 12221
Q ss_pred EEEeeccchhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHH
Q 041969 97 VEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTAT 176 (209)
Q Consensus 97 ~~a~~d~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~ 176 (209)
.... . .. ..-+. +. ..+.+++.+.+.. .+++..|.+.+||.++||.|+..|++.+.+.
T Consensus 80 ~d~~---------~--~~----~~~~~-----~l-~~~~~l~~~~~~~-~~~~~~l~l~~hH~i~DG~S~~~ll~el~~~ 137 (416)
T PRK09294 80 VDGD---------A--AR----PLPEL-----QL-DQGVSLLALDVVP-DDGGARVTLYIHHSIADAHHSASLLDELWSR 137 (416)
T ss_pred Eecc---------c--cc----ccCCC-----CC-CCCCceEEEEEEE-cCCCEEEEEEeccEeEccccHHHHHHHHHHH
Confidence 1110 0 00 00011 11 0223466555432 4578889999999999999999999999998
Q ss_pred Hhc
Q 041969 177 ARA 179 (209)
Q Consensus 177 ~rg 179 (209)
...
T Consensus 138 Y~~ 140 (416)
T PRK09294 138 YTD 140 (416)
T ss_pred HHH
Confidence 864
No 7
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=97.15 E-value=0.0056 Score=51.63 Aligned_cols=126 Identities=16% Similarity=0.190 Sum_probs=71.9
Q ss_pred cceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceecC------Ce-EEEeCCCCce--EEEEee--ccchhhh
Q 041969 40 IYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKD------DF-SIVCNDQGAE--YVEALA--NGFLSEY 108 (209)
Q Consensus 40 ~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~------~~-~I~~~~~gv~--f~~a~~--d~~l~~l 108 (209)
.++..+++|..+.........+.|++.+...+..+|.|.-|++. ++ ++...+--+. +.+... ..+.+++
T Consensus 18 mhv~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~fDl~~Hv~~~~l~~pg~~~~l 97 (263)
T PF03007_consen 18 MHVGALAIFDPPTDGAPPLDVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDFDLDYHVRRVALPAPGDRAEL 97 (263)
T ss_pred ceEEEEEEEEcCCCCCCcchHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCCChHHceEEecCCCCCCHHHH
Confidence 56788889988743222336889999999999999999998862 11 2211111111 111111 1122222
Q ss_pred cCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEe---cCCcEEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969 109 LQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFF---KCGGLAIAVCTHHKLIDGSSVGTFVNSWTATAR 178 (209)
Q Consensus 109 ~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f---~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r 178 (209)
.. ....+.-.. - +.+.|+= |+..+ ..|+++|.+.+||+++||.+.+.++..+.....
T Consensus 98 ~~-----~v~~l~~~p----L--d~~rPlW--e~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~~~~ 157 (263)
T PF03007_consen 98 QA-----LVSRLASTP----L--DRSRPLW--EVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLDRSP 157 (263)
T ss_pred HH-----HHHHHhcCC----C--CCCCCCc--EEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhCCCC
Confidence 11 111111111 0 1334543 33333 457799999999999999999999887765433
No 8
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=97.07 E-value=0.0032 Score=52.24 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=77.3
Q ss_pred cccCCcccc-------ccc-ccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec--CC--eEEEeC-C--
Q 041969 27 NFKLSLMDQ-------ITF-PIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK--DD--FSIVCN-D-- 91 (209)
Q Consensus 27 ~~~LS~lD~-------~~~-~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~~--~~I~~~-~-- 91 (209)
.+|||+.-+ ..+ ..+....+.|+... ....++|++|+.+++..+|.|-.++. +. ...... .
T Consensus 4 ~~plt~~Q~~~~~~~~~~~~~~~~~~~~~~~l~~----~~d~~~l~~A~~~~~~~h~~Lr~~~~~~~~~~~~~~~~~~~~ 79 (301)
T PF00668_consen 4 VYPLTPAQQGIWLLQQLSPDSSSYNIAFVFELDG----PIDIERLRQALERLIARHPILRTRFEEDDGFEPYQRVLESSS 79 (301)
T ss_dssp CEE--HHHHHHHHHHHHSTTSTTTEEEEEEEEEE----S--HHHHHHHHHHHHHH-GGGGEEEEECTTCSSEEEEESEEE
T ss_pred ccCCHHHHHHHHHHhccCCCCCcEEEEEEEEecC----ccchHHHhhhhHhhhhhhhhhhheeeeecccccceeeeeccc
Confidence 466666544 121 23344455555543 24589999999999999999999987 11 111111 1
Q ss_pred CCceEEEEeec-cchhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHH
Q 041969 92 QGAEYVEALAN-GFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFV 170 (209)
Q Consensus 92 ~gv~f~~a~~d-~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl 170 (209)
..+........ ....+... ......-.. -+. ...|++.+.+-....++..|.+.+||.++||.|+..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~l--~~~pl~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~ 149 (301)
T PF00668_consen 80 IEIEYIDVSSDSDSEEEILE-----LIEQELNRP---FDL--SEGPLFRFTLIRTSDDEYFLLISFHHIICDGWSLNILL 149 (301)
T ss_dssp TTCEEEECCTS-HHHHHHHH-----HHHHHHCC------T--CTSBSEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHH
T ss_pred cccccccccccccchhhhhh-----hhhhhhhhc---ccc--cccchhhccccccccccchhcccccccccccccchhhh
Confidence 11221111100 00111110 000000000 011 34588888887777669999999999999999999999
Q ss_pred HHHHHHHhcC
Q 041969 171 NSWTATARAD 180 (209)
Q Consensus 171 ~~Wa~~~rg~ 180 (209)
+.+.+.+.+.
T Consensus 150 ~~l~~~y~~~ 159 (301)
T PF00668_consen 150 RELLQAYAGL 159 (301)
T ss_dssp HHHHHHHHHH
T ss_pred hhhHHhhhcc
Confidence 9999999987
No 9
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=96.94 E-value=0.0036 Score=56.25 Aligned_cols=137 Identities=16% Similarity=0.153 Sum_probs=73.3
Q ss_pred CCccccccc-------ccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceecCCeEEEeCCCCce-EEE-Ee
Q 041969 30 LSLMDQITF-------PIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAE-YVE-AL 100 (209)
Q Consensus 30 LS~lD~~~~-------~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~I~~~~~gv~-f~~-a~ 100 (209)
||++|..+. ...+...+.++.+- ..+.|++++.+.+.++|.|.-++.... .+.|.. ... ..
T Consensus 1 ls~~D~~~l~~e~~~~~~~~~~~~~l~g~l------d~~~l~~al~~~~~rh~~LR~~~~~~~----~~~~~~~~~~~~~ 70 (446)
T TIGR02946 1 LSPVDAAFLRLETPTRPMHIGALAVFEGPL------SFEALRALLESRLPLAPRFRQRLREVP----LGLGHPYWVEDPD 70 (446)
T ss_pred CCHHHHHHHhccCCCCCceEEEEEEEcCCc------cHHHHHHHHHHhhccCChhhcccccCC----CCCCCcEEeeCCC
Confidence 566775432 13344555555443 488999999999999998887775210 001111 111 01
Q ss_pred eccchh----hhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEE-ecCCcEEEEeccceeccchhhHHHHHHHHHH
Q 041969 101 ANGFLS----EYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATF-FKCGGLAIAVCTHHKLIDGSSVGTFVNSWTA 175 (209)
Q Consensus 101 ~d~~l~----~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~-f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~ 175 (209)
.+.... ++...........++-......-+ ...|++.+.+.. +.+|+..+-+.+||+++||.+...+++.+.+
T Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~d--l~~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~ 148 (446)
T TIGR02946 71 FDLDYHVRRVALPAPGTRRELLELVGRLMSTPLD--RSRPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLD 148 (446)
T ss_pred CChHHhhccccCCCCCCHHHHHHHHHHHhcCCCC--CCCCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcC
Confidence 111110 010000111111111100000001 224877776666 6567899999999999999999999988776
Q ss_pred HHh
Q 041969 176 TAR 178 (209)
Q Consensus 176 ~~r 178 (209)
...
T Consensus 149 ~~~ 151 (446)
T TIGR02946 149 DDP 151 (446)
T ss_pred CCC
Confidence 543
No 10
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=96.89 E-value=0.0044 Score=54.97 Aligned_cols=130 Identities=12% Similarity=0.092 Sum_probs=86.0
Q ss_pred ccccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec-C----Ce-EEE-eCCCC--ceEEEEeecc
Q 041969 33 MDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK-D----DF-SIV-CNDQG--AEYVEALANG 103 (209)
Q Consensus 33 lD~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~-~----~~-~I~-~~~~g--v~f~~a~~d~ 103 (209)
.|.....+...+++.|...-+ +++|++||..+....|.|+.+.. + .+ +|. .+-+- ..+.+...|.
T Consensus 18 ~d~~i~~htl~~vi~f~~~fn------i~~lkkAl~~svka~piL~c~f~eg~~~~~Wq~i~d~~v~~~~i~l~~t~~~~ 91 (439)
T COG4908 18 DDYKINDHTLHYVITFGDKFN------IDRLKKALRYSVKAVPILSCKFSEGEKRPFWQRILDFEVDQIAIHLEETKTDE 91 (439)
T ss_pred hhcCcCCceEEEEEEeCCccC------HHHHHHHHHHHHHhhhhhhhhhhhcccchhHHHHhcccccceeEEEeeecccc
Confidence 666666788888888886543 89999999999999999999985 2 12 121 22122 2222223333
Q ss_pred chhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 104 FLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 104 ~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
++.|.. +..|+-..... . ...|++.+-+++-. -|=.|++.+||+++||.|+...+...|++..++
T Consensus 92 ~~~E~~-------fs~Fi~~k~~~--t--~~~PqI~v~~~r~~-~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys~L 156 (439)
T COG4908 92 PFGEVA-------FSRFIVRKLNI--T--KESPQIKVFVVRQT-VGDTLVINLHHAVCDGRGFLEYLYLLARLYSKL 156 (439)
T ss_pred cchhHH-------HHHHHhccccc--c--cCCCeEEEeeehhc-cCcEEEEEechhhhcchhHHHHHHHHHHHHHhc
Confidence 443332 11121111110 1 33688766666554 888899999999999999999999999999765
No 11
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=94.49 E-value=0.37 Score=48.87 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHhhccccccCceecC---C-eEEEeCCCCceEEEEeeccchhhhcCCCCh-hhhcCcccCcc-ccCCcC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLKD---D-FSIVCNDQGAEYVEALANGFLSEYLQKPDQ-KLLRDFHPFKY-AESSAA 131 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~~---~-~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~-~~~~~l~P~~~-~~~~~~ 131 (209)
...++|+++|..++.+++.|--++.. . .++......+.. ..+.|+...++. .....++-... ..-+.
T Consensus 42 ld~~~l~~Al~~lv~rh~~LRt~f~~~~g~~~q~v~~~~~~~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~fdl- 114 (1296)
T PRK10252 42 LDAPLLARAVVAGLAEADTLRMRFTEDNGEVWQWVDPALTFPL------PEIIDLRTQPDPHAAAQALMQADLQQDLRV- 114 (1296)
T ss_pred CCHHHHHHHHHHHHHhccceEEEEEcCCCeEEEEECCCCCCCc------CceeecCCCCCHHHHHHHHHHHHhcCCcCC-
Confidence 45899999999999999988877751 1 112111111110 011111111111 00001110000 00011
Q ss_pred CCC-CCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 132 GIG-DPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 132 ~~~-~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
.. .|++.+.+.....+...|.+.+||.++||.|+..+++.++++.++.
T Consensus 115 -~~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~ 163 (1296)
T PRK10252 115 -DSGKPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYCAW 163 (1296)
T ss_pred -CCCCCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHHHH
Confidence 33 4899888888887889999999999999999999999999888753
No 12
>PRK12467 peptide synthase; Provisional
Probab=94.16 E-value=0.5 Score=53.62 Aligned_cols=115 Identities=15% Similarity=0.137 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHhhccccccCceecC---Ce-EEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCc-cccCCcCC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLKD---DF-SIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFK-YAESSAAG 132 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~~---~~-~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~-~~~~~~~~ 132 (209)
...++|+++|.+++.+++.|--++.. .. ++......+.+.+...+.. .........++-.. ...-+.
T Consensus 1151 ld~~~L~~Al~~vv~rH~~LRT~f~~~~~~~~q~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~fdl-- 1222 (3956)
T PRK12467 1151 LDIEALERSFDALVARHESLRTTFVQEDGRTRQVIHPVGSLTLEEPLLLAA------DKDEAQLKVYVEAEARQPFDL-- 1222 (3956)
T ss_pred cCHHHHHHHHHHHHHhCCcceEEEEccCCeEEEEECCCCCCceEEeecCcc------cchHHHHHHHHHHHhhCCCCC--
Confidence 35899999999999999999888751 11 2222222222222211100 00000000010000 000011
Q ss_pred CCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 133 IGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 133 ~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
...|++.+.+-....+...|-+.+||.++||.|+..+++.+.+..++.
T Consensus 1223 ~~~pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ill~el~~~Y~~~ 1270 (3956)
T PRK12467 1223 EQGPLLRVGLLRLAADEHVLVLTLHHIVSDGWSMQVLVDELVALYAAY 1270 (3956)
T ss_pred CCCcceeEEEEEECCCeEEEEEecchhhhhHhHHHHHHHHHHHHHHHH
Confidence 346777777666666677889999999999999999999999998753
No 13
>PRK12467 peptide synthase; Provisional
Probab=94.14 E-value=0.45 Score=53.93 Aligned_cols=114 Identities=11% Similarity=0.168 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHhhccccccCceec--CC----eEEEeCCCCceEEEEeeccchhhhcCCCC-hhhhcCcccCccc-cCC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLK--DD----FSIVCNDQGAEYVEALANGFLSEYLQKPD-QKLLRDFHPFKYA-ESS 129 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~--~~----~~I~~~~~gv~f~~a~~d~~l~~l~~~p~-~~~~~~l~P~~~~-~~~ 129 (209)
..+++|++|+.+++.+++.|--++. +. .++........+.+.. +....+ ...+..+.-.... .-+
T Consensus 2680 ld~~~l~~A~~~vv~rH~~LRT~f~~~~~~~~~~Qvv~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~fd 2752 (3956)
T PRK12467 2680 LDVERFRTAWQAVIDRHEILRSGFLWDGELEEPLQVVYKQARLPFSRLD-------WRDRADLEQALDALAAADRQQGFD 2752 (3956)
T ss_pred CCHHHHHHHHHHHHHHhhhhheEEEecCCCCCceEEEcccccCceeEee-------cccchhHHHHHHHHHHhhhhcCCC
Confidence 4589999999999999998877764 11 1222221112211111 111000 0011111100000 001
Q ss_pred cCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 130 AAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 130 ~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
. ...|++.+.+-....+...+-+.+||.++||.++..+++.+.+..++.
T Consensus 2753 l--~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~~~ 2801 (3956)
T PRK12467 2753 L--LSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYFGQ 2801 (3956)
T ss_pred C--CCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhcCC
Confidence 1 456888877777777788899999999999999999999999999875
No 14
>PRK05691 peptide synthase; Validated
Probab=92.93 E-value=0.36 Score=55.09 Aligned_cols=113 Identities=12% Similarity=0.166 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHhhccccccCceecC----C-eEEEeCCCCceEEEEeeccchhhhcCCCC---hhhhcCcccCcc-ccC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLKD----D-FSIVCNDQGAEYVEALANGFLSEYLQKPD---QKLLRDFHPFKY-AES 128 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~~----~-~~I~~~~~gv~f~~a~~d~~l~~l~~~p~---~~~~~~l~P~~~-~~~ 128 (209)
...++|++|+..++.+++.|--++.. . .++........+... |+...+. ...+..+.-... ..-
T Consensus 3292 ld~~~l~~Aw~~vv~rh~~LRT~f~~~~~~~~~Qvv~~~~~~~~~~~-------d~~~~~~~~~~~~l~~~~~~~~~~~f 3364 (4334)
T PRK05691 3292 LDPERFAQAWQAVVARHEALRASFSWNAGETMLQVIHKPGRTPIDYL-------DWRGLPEDGQEQRLQALHKQEREAGF 3364 (4334)
T ss_pred CCHHHHHHHHHHHHHHhHHhheEeeecCCCCcEEEEccCCCCceeEe-------ecccCChhhhHHHHHHHHHHHHhCCC
Confidence 35899999999999999998877751 1 223222222222111 1111000 000111110000 000
Q ss_pred CcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 129 SAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 129 ~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+. ...|++.+.+.....+...+-+.+||.+.||.|+..+++.+.++..+
T Consensus 3365 dl--~~~pl~r~~l~~~~~~~~~l~~~~HH~i~DGwS~~ll~~dl~~~Y~~ 3413 (4334)
T PRK05691 3365 DL--LNQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMNDFFEIYTA 3413 (4334)
T ss_pred Cc--CCCCcEEEEEEEecCcEEEEEEEehhhhhccccHHHHHHHHHHHHHH
Confidence 11 45688877777777677789999999999999999999999988864
No 15
>PRK12316 peptide synthase; Provisional
Probab=91.66 E-value=1.1 Score=52.11 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHHhhccccccCceec---CCe-EEEeCCCCceEEEEeeccchhhhcCCCC---hhhhcCcccCcc-ccCC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLK---DDF-SIVCNDQGAEYVEALANGFLSEYLQKPD---QKLLRDFHPFKY-AESS 129 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~---~~~-~I~~~~~gv~f~~a~~d~~l~~l~~~p~---~~~~~~l~P~~~-~~~~ 129 (209)
...++|+++|.+++.+++.|--++. +.. ........+.+.+.. +....+ ........-... .--+
T Consensus 84 ld~~~l~~A~~~vv~rHe~LRt~f~~~~~~~~q~v~~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~~pfd 156 (5163)
T PRK12316 84 LDRQALERAFASLVQRHETLRTVFPRGADDSLAQVPLDRPLEVEFED-------CSGLPEAEQEARLRDEAQRESLQPFD 156 (5163)
T ss_pred CCHHHHHHHHHHHHHHhhhceEEEEeeCCeEEEEECCCCCCCccEEE-------CCCCChhhHHHHHHHHHHHhhcCCCC
Confidence 3589999999999999999988885 121 111112222221111 111000 000111110000 0001
Q ss_pred cCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 130 AAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 130 ~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
. ...|++.+.+-....+...+.+.+||.++||.|+..|++.+++..++.
T Consensus 157 l--~~~pl~r~~l~~~~~~~~~l~l~~HHii~Dg~S~~~l~~el~~~Y~~~ 205 (5163)
T PRK12316 157 L--CEGPLLRVRLLRLGEEEHVLLLTLHHIVSDGWSMNVLIEEFSRFYSAY 205 (5163)
T ss_pred C--CCCCceEEEEEEECCCcEEEEEcccceeechhHHHHHHHHHHHHHHHH
Confidence 1 346888777777766778999999999999999999999999998854
No 16
>PRK05691 peptide synthase; Validated
Probab=91.26 E-value=0.76 Score=52.60 Aligned_cols=116 Identities=14% Similarity=0.093 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHhhccccccCceecC---C-eEEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCcc-ccCCcCC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLKD---D-FSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKY-AESSAAG 132 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~~---~-~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~~-~~~~~~~ 132 (209)
...++|++|+.+++.+++.|--++.. . .++........+...... ++........+..+.-... ..-+.
T Consensus 1763 ld~~~L~~A~~~lv~rH~~LRT~f~~~~~~~~q~v~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~~~~~~fdl-- 1836 (4334)
T PRK05691 1763 LDVDRFEAALQALILRHETLRTTFPSVDGVPVQQVAEDSGLRMDWQDFS----ALPADARQQRLQQLADSEAHQPFDL-- 1836 (4334)
T ss_pred CCHHHHHHHHHHHHHhCCcceEEEEccCCeEEEEECCCCCCCeeEeecc----CCChHhHHHHHHHHHHHHHhcCCCC--
Confidence 45899999999999999998877751 1 122222222222211110 0000000000001110000 00011
Q ss_pred CCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 133 IGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 133 ~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
...|++.+.+-....+...+-+.+||.++||.|+..+++.+++..++
T Consensus 1837 ~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~~ 1883 (4334)
T PRK05691 1837 ERGPLLRACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYEA 1883 (4334)
T ss_pred CCCceeEEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHHH
Confidence 34688777776666566789999999999999999999999999874
No 17
>PRK12316 peptide synthase; Provisional
Probab=90.85 E-value=1.3 Score=51.59 Aligned_cols=112 Identities=11% Similarity=0.099 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHhhccccccCceecC---C-eEEEeCCCCceEEEEee-ccchhhhcCCCChhhhcCcccCccccCCcCC
Q 041969 58 QISQRLKSSLSKTLTKFYPFAGRLKD---D-FSIVCNDQGAEYVEALA-NGFLSEYLQKPDQKLLRDFHPFKYAESSAAG 132 (209)
Q Consensus 58 ~~~~~L~~sL~~~L~~~p~laGrl~~---~-~~I~~~~~gv~f~~a~~-d~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~ 132 (209)
...++|++++..++.+++.|--++.. . .++........+..... +..-+++. .......-.. -+.
T Consensus 2637 ld~~~L~~A~~~lv~rH~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---fdl-- 2706 (5163)
T PRK12316 2637 LDQAALEQAFDALVLRHETLRTRFVEVGEQTRQVILPNMSLRIVLEDCAGVADAAIR-----QRVAEEIQRP---FDL-- 2706 (5163)
T ss_pred cCHHHHHHHHHHHHHHhhHhhcceeeeCCeEEEEECCCCCccceeeccccCCHHHHH-----HHHHHHhhCC---CCC--
Confidence 45899999999999999998888751 1 11222211111111000 00000000 0000000000 011
Q ss_pred CCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 133 IGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 133 ~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
...|++.+.+-....+...+.+.+||.++||.|+..+++.+.+..++
T Consensus 2707 ~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~eL~~~Y~~ 2753 (5163)
T PRK12316 2707 ARGPLLRVRLLALDGQEHVLVITQHHIVSDGWSMQVMVDELVQAYAG 2753 (5163)
T ss_pred CCCCcEEEEEEEECCCeEEEEEecCcCcccHhHHHHHHHHHHHHHHH
Confidence 44688877777766667889999999999999999999999999886
No 18
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=90.74 E-value=0.68 Score=42.05 Aligned_cols=43 Identities=19% Similarity=0.106 Sum_probs=35.0
Q ss_pred EEEEEEecCC----cEEEEeccceeccchhhHHHHHHHHHHHHhcCC
Q 041969 139 RIQATFFKCG----GLAIAVCTHHKLIDGSSVGTFVNSWTATARADS 181 (209)
Q Consensus 139 ~vQvt~f~cG----G~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~~ 181 (209)
..++..+..+ ..-|.+.+||+++||+|...|.+.+-+..+...
T Consensus 126 ~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~L~~~~ 172 (480)
T PF07247_consen 126 LWRLIVLPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEALNSLS 172 (480)
T ss_pred CeEEEEECCCCCCcceEEEEEecccccccHHHHHHHHHHHHHHhhcc
Confidence 3567777743 467899999999999999999998888888653
No 19
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=79.52 E-value=2.2 Score=35.16 Aligned_cols=29 Identities=28% Similarity=0.509 Sum_probs=25.3
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATAR 178 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r 178 (209)
+-|++.+||+++||.=+..|++...+.+.
T Consensus 185 mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~~ 213 (219)
T PRK13757 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_pred EEEEEEEehhccchHHHHHHHHHHHHHHH
Confidence 66899999999999999999998877653
No 20
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=78.79 E-value=2 Score=34.99 Aligned_cols=40 Identities=28% Similarity=0.508 Sum_probs=24.9
Q ss_pred CCCCeeEEEEEEecCCc---EEEEeccceeccchhhHHHHHHHH
Q 041969 133 IGDPMLRIQATFFKCGG---LAIAVCTHHKLIDGSSVGTFVNSW 173 (209)
Q Consensus 133 ~~~Pll~vQvt~f~cGG---~~Lg~~~~H~v~Dg~g~~~fl~~W 173 (209)
...|.+++=-=.-. || +-|++.+||+++||.=+.+|++..
T Consensus 163 ~~~P~it~GK~~~~-~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 163 DSIPRITWGKYFEE-NGRLLMPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp -SS-EEEEE--EEE-TTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred ccccEEEeeeeEeE-CCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence 34676643222223 56 679999999999999999998754
No 21
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=73.50 E-value=3.4 Score=37.08 Aligned_cols=29 Identities=17% Similarity=0.494 Sum_probs=26.6
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATAR 178 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r 178 (209)
+-|++++||.+.||.-+..|++.|.+...
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~le 403 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELLE 403 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHHh
Confidence 66999999999999999999999998764
No 22
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=68.05 E-value=5.3 Score=37.36 Aligned_cols=29 Identities=24% Similarity=0.488 Sum_probs=26.4
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATAR 178 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r 178 (209)
+-|++++||-+.||.-...||+.|.+...
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~le 540 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLLA 540 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHHh
Confidence 45999999999999999999999998764
No 23
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=57.47 E-value=11 Score=36.01 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=26.7
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.|.+..-.
T Consensus 598 m~lslt~DHRviDGa~aa~Fl~~lk~~LE~ 627 (633)
T PRK11854 598 LPLSLSYDHRVIDGADGARFITIINDRLSD 627 (633)
T ss_pred EEEeEEccchhcchHHHHHHHHHHHHHHhC
Confidence 348999999999999999999999988753
No 24
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=54.50 E-value=16 Score=30.26 Aligned_cols=30 Identities=17% Similarity=0.451 Sum_probs=26.1
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-+..|++.+.+....
T Consensus 196 ~~lslt~DHRvidG~~aa~Fl~~l~~~le~ 225 (231)
T PF00198_consen 196 MNLSLTFDHRVIDGAEAARFLKDLKELLEN 225 (231)
T ss_dssp EEEEEEEETTTS-HHHHHHHHHHHHHHHHS
T ss_pred EEeEEeccceEEcHHHHHHHHHHHHHHHhC
Confidence 568899999999999999999999988764
No 25
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=50.64 E-value=16 Score=32.97 Aligned_cols=30 Identities=23% Similarity=0.719 Sum_probs=27.0
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-...||+.|.+....
T Consensus 378 m~lslt~DHRviDGa~aa~Fl~~lk~~le~ 407 (416)
T PLN02528 378 MTVTIGADHRVLDGATVARFCNEWKSYVEK 407 (416)
T ss_pred EEEeEeccchhcCcHHHHHHHHHHHHHHhC
Confidence 448999999999999999999999988764
No 26
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=50.27 E-value=17 Score=31.51 Aligned_cols=30 Identities=23% Similarity=0.540 Sum_probs=26.9
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-...|++.|.+....
T Consensus 270 m~lslt~DHRviDGa~aa~Fl~~lk~~LE~ 299 (306)
T PRK11857 270 MHLTVAADHRWIDGATIGRFASRVKELLEK 299 (306)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 448899999999999999999999998764
No 27
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=49.67 E-value=16 Score=33.16 Aligned_cols=30 Identities=20% Similarity=0.495 Sum_probs=27.0
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-...|++.|.+....
T Consensus 400 m~lsls~DHRviDGa~aa~Fl~~lk~~lE~ 429 (435)
T TIGR01349 400 MSVTLSCDHRVIDGAVGAEFLKSFKKYLEN 429 (435)
T ss_pred EEEeEeecchhhCcHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998754
No 28
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=47.57 E-value=19 Score=31.74 Aligned_cols=30 Identities=13% Similarity=0.428 Sum_probs=26.6
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.....|++.|.+....
T Consensus 312 m~lsls~DHRviDGa~aa~Fl~~lk~~lE~ 341 (347)
T PRK14843 312 MSLGLTIDHRVVDGMAGAKFMKDLKELIET 341 (347)
T ss_pred EEEEEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 348999999999999999999999988654
No 29
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=47.31 E-value=20 Score=32.55 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=27.0
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-+..|++.|.+....
T Consensus 381 m~lsLs~DHRviDGa~AA~FL~~lk~~LE~ 410 (418)
T PTZ00144 381 MYLALTYDHRLIDGRDAVTFLKKIKDLIED 410 (418)
T ss_pred EEEEEecchhhhChHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999987653
No 30
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=45.84 E-value=22 Score=32.01 Aligned_cols=30 Identities=27% Similarity=0.421 Sum_probs=26.9
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-...||+.|.+....
T Consensus 366 m~lsLt~DHRviDGa~aa~Fl~~l~~~le~ 395 (403)
T TIGR01347 366 MYLALSYDHRLIDGKEAVTFLVTIKELLED 395 (403)
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHhcC
Confidence 348999999999999999999999988764
No 31
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=45.01 E-value=22 Score=32.05 Aligned_cols=29 Identities=21% Similarity=0.349 Sum_probs=26.4
Q ss_pred EEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 151 AIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 151 ~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
-|++++.|-+.||.....||+.|.+....
T Consensus 371 ~lsls~DHRviDGa~aa~Fl~~l~~~le~ 399 (407)
T PRK05704 371 YLALSYDHRIIDGKEAVGFLVTIKELLED 399 (407)
T ss_pred EEEEEechhhhCcHHHHHHHHHHHHHhhC
Confidence 48999999999999999999999988764
No 32
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=43.18 E-value=26 Score=32.89 Aligned_cols=30 Identities=20% Similarity=0.435 Sum_probs=26.6
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-...||+.|.+....
T Consensus 511 m~ltls~DHRviDGa~aa~Fl~~~~~~le~ 540 (546)
T TIGR01348 511 LPLSLSYDHRVIDGADAARFTTYICESLAD 540 (546)
T ss_pred EEEeEeccchhcChHHHHHHHHHHHHHHhC
Confidence 348999999999999999999999988653
No 33
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=41.83 E-value=33 Score=28.05 Aligned_cols=47 Identities=23% Similarity=0.419 Sum_probs=31.7
Q ss_pred CCCCeeEEEEEEecCCc--EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 133 IGDPMLRIQATFFKCGG--LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 133 ~~~Pll~vQvt~f~cGG--~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
...|++..=--.=.+|- +-|++..||+.+||.=+..|++.......-
T Consensus 165 ~~~PiF~~Grf~~~~Gkl~lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~~ 213 (219)
T COG4845 165 YGQPIFYAGRFYEEDGKLTLPLAVQAHHANVDGFHIGQLFDQLQTLFSP 213 (219)
T ss_pred ccceeEeecceeccCCeEEEeEEEEecccccchhhHHHHHHHHHHHhcC
Confidence 45776643222222343 337899999999999999999877665543
No 34
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=40.96 E-value=27 Score=32.15 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=27.1
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.-...|++.|.+....
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~LE~ 455 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVVED 455 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999988653
No 35
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=40.78 E-value=28 Score=33.01 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=26.7
Q ss_pred EEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 151 AIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 151 ~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
-|++++.|-+.||.....||+.|.+....
T Consensus 553 ~lsls~DHRviDGa~aa~Fl~~lk~~LE~ 581 (590)
T TIGR02927 553 HLPLTYDHQLIDGADAGRFLTTIKDRLEE 581 (590)
T ss_pred EEeeeccchhcCcHHHHHHHHHHHHHHhC
Confidence 38999999999999999999999998775
No 36
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=38.04 E-value=30 Score=32.48 Aligned_cols=30 Identities=13% Similarity=0.451 Sum_probs=26.8
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|++++.|-+.||.....||+.|.+....
T Consensus 504 m~lsLs~DHRvIDGa~AA~FL~~lk~~LE~ 533 (539)
T PLN02744 504 MSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 533 (539)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999987653
No 37
>KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion]
Probab=33.98 E-value=45 Score=29.63 Aligned_cols=29 Identities=24% Similarity=0.652 Sum_probs=25.2
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATAR 178 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r 178 (209)
+.+.++..|-+.||.++..|-+.|-+..-
T Consensus 436 M~VswsADHRViDGaTmarFsn~WK~YlE 464 (474)
T KOG0558|consen 436 MMVSWSADHRVIDGATMARFSNQWKEYLE 464 (474)
T ss_pred EEEEeecCceeeccHHHHHHHHHHHHHhh
Confidence 44678889999999999999999988754
Done!