Query 041969
Match_columns 209
No_of_seqs 130 out of 1102
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 21:47:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 6.8E-43 2.3E-47 311.9 20.4 188 2-203 3-194 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 1.4E-42 4.7E-47 308.5 20.5 193 5-207 3-202 (421)
3 2e1v_A Acyl transferase; BAHD 100.0 1.7E-38 5.9E-43 284.3 16.7 198 1-203 1-212 (454)
4 2xr7_A Malonyltransferase; xen 100.0 3.2E-38 1.1E-42 282.3 16.4 196 6-206 1-210 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 7.1E-30 2.4E-34 227.9 15.8 171 27-205 4-198 (451)
6 1q9j_A PAPA5, polyketide synth 97.9 0.00012 4.2E-09 63.0 11.2 132 26-179 6-145 (422)
7 4hvm_A Tlmii; PSI-biology, mid 97.2 0.003 1E-07 55.7 11.8 138 26-180 12-164 (493)
8 1l5a_A Amide synthase, VIBH; n 97.1 0.0025 8.6E-08 55.0 9.9 121 42-179 23-147 (436)
9 2jgp_A Tyrocidine synthetase 3 97.0 0.0068 2.3E-07 53.8 12.1 136 25-180 94-244 (520)
10 2xhg_A Tyrocidine synthetase A 96.2 0.039 1.3E-06 47.8 11.2 139 25-179 15-168 (466)
11 2vsq_A Surfactin synthetase su 95.7 0.046 1.6E-06 54.3 10.2 123 42-179 37-168 (1304)
12 3cla_A Type III chloramphenico 82.9 0.94 3.2E-05 35.8 3.5 44 135-178 164-209 (213)
13 2i9d_A Chloramphenicol acetylt 82.3 1 3.5E-05 35.8 3.5 43 135-177 172-216 (217)
14 1q23_A Chloramphenicol acetylt 81.6 1.1 3.9E-05 35.6 3.5 45 135-179 168-214 (219)
15 3b8k_A PDCE2;, dihydrolipoylly 81.4 1.3 4.6E-05 35.6 3.9 30 150-179 204-233 (239)
16 1dpb_A Dihydrolipoyl-transacet 79.1 1.5 5.1E-05 35.4 3.5 30 150-179 208-237 (243)
17 1scz_A E2, dihydrolipoamide su 79.0 1.5 5.2E-05 35.1 3.5 30 150-179 196-225 (233)
18 3rqc_A Probable lipoamide acyl 78.9 1.3 4.4E-05 35.3 3.0 31 150-180 187-217 (224)
19 2ii3_A Lipoamide acyltransfera 77.7 1.7 5.9E-05 35.5 3.5 30 150-179 224-253 (262)
20 3mae_A 2-oxoisovalerate dehydr 73.4 2.6 9E-05 34.3 3.5 31 150-180 210-240 (256)
21 3l60_A Branched-chain alpha-ke 72.3 2.9 0.0001 33.9 3.5 30 150-179 205-234 (250)
22 3dva_I Dihydrolipoyllysine-res 54.3 2.6 9.1E-05 36.9 0.0 30 150-179 391-420 (428)
23 3fot_A 15-O-acetyltransferase; 53.9 8.7 0.0003 34.4 3.3 28 55-82 70-97 (519)
24 4hhu_A OR280; engineered prote 43.4 34 0.0012 24.5 4.4 33 43-82 84-116 (170)
25 4hhu_A OR280; engineered prote 41.3 33 0.0011 24.6 4.1 31 45-82 5-35 (170)
26 2xt6_A 2-oxoglutarate decarbox 31.9 29 0.00098 34.1 3.3 30 150-179 192-221 (1113)
27 2kl8_A OR15; structural genomi 25.3 1.3E+02 0.0046 18.9 5.1 24 59-82 11-34 (85)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=6.8e-43 Score=311.93 Aligned_cols=188 Identities=29% Similarity=0.493 Sum_probs=158.4
Q ss_pred CCcceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCcee
Q 041969 2 VRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRL 81 (209)
Q Consensus 2 ~~~~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl 81 (209)
|++|+|+|.++++|+|+.+++. +.++||+||+.+++.|++.+|||+.+.. +....+++||+||+++|++||||||||
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl 79 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRL 79 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEE
T ss_pred CCceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceee
Confidence 4679999999999999998863 5799999999988899999999997643 234568999999999999999999999
Q ss_pred c----CCeEEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccc
Q 041969 82 K----DDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTH 157 (209)
Q Consensus 82 ~----~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~ 157 (209)
+ ++++|.||++||.|+||++|++++|+....+...+..|+|......+. .+.|++.+|+|+|+|||++||+++|
T Consensus 80 ~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~--~~~pll~vQvT~f~cGG~~lg~~~~ 157 (439)
T 4g22_A 80 KRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGI--SSYALLVLQVTYFKCGGVSLGVGMR 157 (439)
T ss_dssp EECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCT--TSSCSEEEEEEECTTSCEEEEEEEC
T ss_pred eeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCccccc--ccCceeEEEEEEecCCCEEEEEEee
Confidence 8 479999999999999999999999997532223456788765322222 5679999999999999999999999
Q ss_pred eeccchhhHHHHHHHHHHHHhcCCCCccccccCcccCCcccccccC
Q 041969 158 HKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFF 203 (209)
Q Consensus 158 H~v~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~~ 203 (209)
|.++||.|+.+|+++||++|||. ....+|+|||+.|.
T Consensus 158 H~v~Dg~~~~~Fl~~wa~~~rg~---------~~~~~P~~dr~~l~ 194 (439)
T 4g22_A 158 HHAADGFSGLHFINSWSDMARGL---------DVTLPPFIDRTLLR 194 (439)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTTC---------CCSSCCBCCGGGGC
T ss_pred eccCcHHHHHHHHHHHHHHhCCC---------CCCCCCcccccccc
Confidence 99999999999999999999997 33457999999653
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.4e-42 Score=308.47 Aligned_cols=193 Identities=37% Similarity=0.580 Sum_probs=165.1
Q ss_pred ceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCC--CchhHHHHHHHHHHHhhccccccCceec
Q 041969 5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSV--KSYQISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~--~~~~~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
|+|+|+++++|+|+.|++.+.+.++||+||+..++.|++.+|||+.+... +...++++||+||+++|++||+|||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 88999999999999888765568999999998778999999999976431 3567899999999999999999999999
Q ss_pred CCeEEEeCCCCceEEEEeeccchhhhcCC-CChhhhcCcccCccccCC--cCCCCCCeeEEEEEEecCCcEEEEecccee
Q 041969 83 DDFSIVCNDQGAEYVEALANGFLSEYLQK-PDQKLLRDFHPFKYAESS--AAGIGDPMLRIQATFFKCGGLAIAVCTHHK 159 (209)
Q Consensus 83 ~~~~I~~~~~gv~f~~a~~d~~l~~l~~~-p~~~~~~~l~P~~~~~~~--~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~ 159 (209)
++++|.|+++||.|++|++|++++|+... |+...++.|+|... ..+ ....+.|++.+|+|+|+|||++||+++||.
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~ 161 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHK 161 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETT
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEEEeeEE
Confidence 88999999999999999999999999875 65555667888662 111 001568999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhcCCCCccccccCcccCCcccc-cccCCC-CC
Q 041969 160 LIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVA-ATFFPA-SE 207 (209)
Q Consensus 160 v~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr-~~~~~~-~~ 207 (209)
++||.|+.+|+++||++|||.. .. .+|+||| +.++|+ +|
T Consensus 162 v~Dg~~~~~fl~~wa~~~rg~~--------~~-~~P~~dr~~~l~p~~~~ 202 (421)
T 2bgh_A 162 IADVLSLATFLNAWTATCRGET--------EI-VLPNFDLAARHFPPVDN 202 (421)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCS--------CC-CCCBCSHHHHHSCCCTT
T ss_pred echHHHHHHHHHHHHHHhcCCC--------CC-CCCccccccccCCCccc
Confidence 9999999999999999999972 22 5799999 888877 55
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.7e-38 Score=284.32 Aligned_cols=198 Identities=24% Similarity=0.335 Sum_probs=152.4
Q ss_pred CCCcceEEEEeeeEEecCCCCCCCCccccCCcccccccc-cceEEEEEEcCCCCCC--chhHHHHHHHHHHHhhcccccc
Q 041969 1 MVRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFP-IYVCTIFLYKADGSVK--SYQISQRLKSSLSKTLTKFYPF 77 (209)
Q Consensus 1 ~~~~~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~-~~i~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~l 77 (209)
|++..+|+|+++++|+|+.+++. .+.++||+||+.+.. .|++.+|||+.+...+ .+.++++||+||+++|++||+|
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhcccc
Confidence 77789999999999999976443 578999999998654 6999999999764312 3467999999999999999999
Q ss_pred Cceec--C----CeEEEeC-CCCceEEEEeeccchhhhcCCC--ChhhhcCcccCccccCCc-CCCCCCeeEEEEEEecC
Q 041969 78 AGRLK--D----DFSIVCN-DQGAEYVEALANGFLSEYLQKP--DQKLLRDFHPFKYAESSA-AGIGDPMLRIQATFFKC 147 (209)
Q Consensus 78 aGrl~--~----~~~I~~~-~~gv~f~~a~~d~~l~~l~~~p--~~~~~~~l~P~~~~~~~~-~~~~~Pll~vQvt~f~c 147 (209)
||||+ + +++|.|+ ++||.|+||+++.+++++.... +...+..|+|......+. ...+.|++.+|+|+|+|
T Consensus 80 AGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~c 159 (454)
T 2e1v_A 80 VGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPN 159 (454)
T ss_dssp GSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETT
T ss_pred ceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecC
Confidence 99997 2 6899999 5999999999999999997532 233456778765311110 01335999999999999
Q ss_pred CcEEEEeccceeccchhhHHHHHHHHHHHHh-cCCCCccccccCcccCCcccccccC
Q 041969 148 GGLAIAVCTHHKLIDGSSVGTFVNSWTATAR-ADSQSSSISNINKQVIPAFVAATFF 203 (209)
Q Consensus 148 GG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r-g~~~~~~~~~~~~~~~p~~dr~~~~ 203 (209)
||++||+++||.++||.|+.+|+++||++|| |..... . .....+|+||| .+.
T Consensus 160 gG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~-~--~~~~~~P~~dr-~l~ 212 (454)
T 2e1v_A 160 QGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDES-F--LANGTRPLYDR-IIK 212 (454)
T ss_dssp TEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHH-H--HHHSCCCBCCC-CCC
T ss_pred CcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccc-c--CCCCCCCcccc-cCC
Confidence 9999999999999999999999999999999 751000 0 01133689999 653
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=3.2e-38 Score=282.35 Aligned_cols=196 Identities=20% Similarity=0.268 Sum_probs=155.5
Q ss_pred eEEEEeeeEEecCCCCCCCCccccCCcccccccc-cceEEEEEEcCCCCCC--chhHHHHHHHHHHHhhccccccCceec
Q 041969 6 EVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFP-IYVCTIFLYKADGSVK--SYQISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 6 ~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~-~~i~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
+|+|+++++|+|+.+++. .+.++||+||+.+.+ .|++.+|||+.+...+ .+.++++||+||+++|++||+|||||+
T Consensus 1 ~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 79 (453)
T 2xr7_A 1 MASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVA 79 (453)
T ss_dssp -CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCE
T ss_pred CeEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEE
Confidence 389999999999976443 578999999998654 6999999999764322 456799999999999999999999995
Q ss_pred ------CCeEEEeC-CCCceEEEEeeccchhhhcCC--CChhhhcCcccCccccCCc-CCCCCCeeEEEEEEecCCcEEE
Q 041969 83 ------DDFSIVCN-DQGAEYVEALANGFLSEYLQK--PDQKLLRDFHPFKYAESSA-AGIGDPMLRIQATFFKCGGLAI 152 (209)
Q Consensus 83 ------~~~~I~~~-~~gv~f~~a~~d~~l~~l~~~--p~~~~~~~l~P~~~~~~~~-~~~~~Pll~vQvt~f~cGG~~L 152 (209)
++++|.|+ ++||.|+||+++.+++++... ++...+..|+|......+. ...+.|++.+|+|+|+|||++|
T Consensus 80 ~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~l 159 (453)
T 2xr7_A 80 CPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISI 159 (453)
T ss_dssp EESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEE
T ss_pred ccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEE
Confidence 37899999 599999999999999999753 2344556778765211000 0022799999999999999999
Q ss_pred EeccceeccchhhHHHHHHHHHHHHh-cCCCCccccccCcccCCcccccccCCCC
Q 041969 153 AVCTHHKLIDGSSVGTFVNSWTATAR-ADSQSSSISNINKQVIPAFVAATFFPAS 206 (209)
Q Consensus 153 g~~~~H~v~Dg~g~~~fl~~Wa~~~r-g~~~~~~~~~~~~~~~p~~dr~~~~~~~ 206 (209)
|+++||.++||.|+.+|+++||++|| |.... .......|+|||+.+++|.
T Consensus 160 g~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~----~~~~~~~P~~dr~~l~~p~ 210 (453)
T 2xr7_A 160 GFTNHHVAGDGATIVKFVRAWALLNKFGGDEQ----FLANEFIPFYDRSVIKDPN 210 (453)
T ss_dssp EEEECTTTCCSHHHHHHHHHHHHHHHTTTCGG----GSCGGGSCBCCCSSSCCSS
T ss_pred EEeeeeeeechhHHHHHHHHHHHHhhcCCCcc----cCCCCCCCccccccccCCC
Confidence 99999999999999999999999999 75110 0012346999999888654
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.97 E-value=7.1e-30 Score=227.92 Aligned_cols=171 Identities=18% Similarity=0.184 Sum_probs=127.0
Q ss_pred cccCCcccccc--cccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec---------CCeEEEeCCCCce
Q 041969 27 NFKLSLMDQIT--FPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK---------DDFSIVCNDQGAE 95 (209)
Q Consensus 27 ~~~LS~lD~~~--~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---------~~~~I~~~~~gv~ 95 (209)
.++||.|||.+ ++.|++.++||+.++..+...++++||+||+++|++||||||||+ ++++|.|++.+..
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 36899999987 689999999999643223567899999999999999999999997 1478888776667
Q ss_pred EEEEeecc-----chhhhcC--CCChh-hhcCcccCc--ccc---CCcCCCCCCeeEEEEEEecCCcEEEEeccceeccc
Q 041969 96 YVEALANG-----FLSEYLQ--KPDQK-LLRDFHPFK--YAE---SSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLID 162 (209)
Q Consensus 96 f~~a~~d~-----~l~~l~~--~p~~~-~~~~l~P~~--~~~---~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~D 162 (209)
|++++++. +++++.. .|... ....+.|.. +.. ... .+.|++.+|+|+| |||++||+++||.++|
T Consensus 84 ~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~--~~~pll~vQvT~~-~GG~~lg~~~~H~v~D 160 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPD--DPKPVILLQLNFI-KGGLILTVNGQHGAMD 160 (451)
T ss_dssp EEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTT--SCCBSEEEEEEEE-BTEEEEEEEEETTTCC
T ss_pred EEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCC--CCCceEEEEEEEe-cCceeeeeeehhcccc
Confidence 99988865 6777763 22111 011133321 101 111 4589999999966 7999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCCCccccccCcccCCcccccccCCC
Q 041969 163 GSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFPA 205 (209)
Q Consensus 163 g~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~~~~ 205 (209)
|.|+.+|+++||++|||.... .....+|+|||+.+.|.
T Consensus 161 g~g~~~Fl~awa~~~rg~~~~-----~~~~~~p~~dr~~~~p~ 198 (451)
T 2rkv_A 161 MVGQDAVIRLLSKACRNDPFT-----EEEMTAMNLDRKTIVPY 198 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCC-----HHHHHHTTCCSTTSSCC
T ss_pred HHHHHHHHHHHHHHhcCCCCC-----ccccccccCchhhcccc
Confidence 999999999999999996210 00123589999877654
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=97.85 E-value=0.00012 Score=62.99 Aligned_cols=132 Identities=14% Similarity=0.161 Sum_probs=81.6
Q ss_pred ccccCCccccccc--ccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec---CC-eEEEeCCCCce-EEE
Q 041969 26 RNFKLSLMDQITF--PIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK---DD-FSIVCNDQGAE-YVE 98 (209)
Q Consensus 26 ~~~~LS~lD~~~~--~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---~~-~~I~~~~~gv~-f~~ 98 (209)
..+|||++.+.+. ...+...+-++.+- ..++|+++|.+++.++|.|--++. +. .++........ +.+
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~ 79 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICV 79 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC------CHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEE
Confidence 4689999887543 23344555555433 378999999999999999998886 12 22222211111 111
Q ss_pred EeeccchhhhcCCCCh-hhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHH
Q 041969 99 ALANGFLSEYLQKPDQ-KLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATA 177 (209)
Q Consensus 99 a~~d~~l~~l~~~p~~-~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~ 177 (209)
. ++....+. .....-.|. + ...|++.+.+.. ..++..|.+.+||.++||.|+..|++.|.+..
T Consensus 80 ~-------d~~~~~~~~~~~~~~~~~---d-----~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y 143 (422)
T 1q9j_A 80 I-------DGTAATNGSPSGNAELRL---D-----QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRY 143 (422)
T ss_dssp E-------C------------CCCCC---C-----TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred E-------ECCCCCcchhhhcccCcc---C-----CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHH
Confidence 1 11110000 000000011 0 346888777766 66789999999999999999999999999998
Q ss_pred hc
Q 041969 178 RA 179 (209)
Q Consensus 178 rg 179 (209)
++
T Consensus 144 ~~ 145 (422)
T 1q9j_A 144 TD 145 (422)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.23 E-value=0.003 Score=55.70 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=84.2
Q ss_pred ccccCCcccccc-------cc--cceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec---CCeEEEeCCCC
Q 041969 26 RNFKLSLMDQIT-------FP--IYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK---DDFSIVCNDQG 93 (209)
Q Consensus 26 ~~~~LS~lD~~~-------~~--~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---~~~~I~~~~~g 93 (209)
..+|||++-+.+ +. ..+...+-++.+ ...++|+++|.+++.++|.|--++. +.+.+.....
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~- 84 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR------IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA- 84 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS------CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC-
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC------CCHHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC-
Confidence 468999876421 11 223344444433 3489999999999999999988886 2233222222
Q ss_pred ceEEEEeecc-ch--hhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHH
Q 041969 94 AEYVEALANG-FL--SEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFV 170 (209)
Q Consensus 94 v~f~~a~~d~-~l--~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl 170 (209)
..+.+..... +- +++.. ......-.. -+. ...|++.+.+-....+...|.+.+||.++||.|+..++
T Consensus 85 ~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~---fdl--~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~ 154 (493)
T 4hvm_A 85 DALVRSDLRGHPDPQARCVE-----LLRADRDRP---TDP--ERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVL 154 (493)
T ss_dssp CCEEEEECTTSSSHHHHHHH-----HHHHHHSSC---CCT--TTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHH
T ss_pred CCceEEECCCCCchHHHHHH-----HHHHHhcCC---CCC--CCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHH
Confidence 4443333210 00 11100 000000011 011 34588877777777667899999999999999999999
Q ss_pred HHHHHHHhcC
Q 041969 171 NSWTATARAD 180 (209)
Q Consensus 171 ~~Wa~~~rg~ 180 (209)
+.+.+...|.
T Consensus 155 ~~l~~~Y~g~ 164 (493)
T 4hvm_A 155 GAVWQAYYGR 164 (493)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhCCC
Confidence 9999999775
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=97.11 E-value=0.0025 Score=55.02 Aligned_cols=121 Identities=14% Similarity=0.071 Sum_probs=73.2
Q ss_pred eEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec--CCeEEEeCCCCceEEEEeeccchhhhcCCCCh-hhhc
Q 041969 42 VCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK--DDFSIVCNDQGAEYVEALANGFLSEYLQKPDQ-KLLR 118 (209)
Q Consensus 42 i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~-~~~~ 118 (209)
+...+-++.+- ..++|++++.+++.++|.|--++. +. .+ .......+.+.. +...++. ....
T Consensus 23 ~~~~~~l~g~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v-~~~~~~~~~~~d-------~~~~~~~~~~~~ 87 (436)
T 1l5a_A 23 VAHSLRLTGPL------DTTLLLRALHLTVSEIDLFRARFSAQGE-LY-WHPFSPPIDYQD-------LSIHLEAEPLAW 87 (436)
T ss_dssp EEEEEEEESSC------CHHHHHHHHHHHHHTCGGGGEEECTTCC-EE-ECSSCCCCEEEE-------CTTCTTHHHHHH
T ss_pred eeEEEEEeCCC------CHHHHHHHHHHHHHHhheeEEEEEecCC-eE-CCCcCCCccEEe-------CCCCCCHHHHHH
Confidence 45555555443 488999999999999999988886 22 22 221122221111 1111110 0000
Q ss_pred CcccCcc-ccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 119 DFHPFKY-AESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 119 ~l~P~~~-~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
.++-... ..-+. ...|++.+.+-....+...|.+.+||.++||.|+..|++.+.+..++
T Consensus 88 ~~~~~~~~~~fdl--~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~ 147 (436)
T 1l5a_A 88 RQIEQDLQRSSTL--IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQS 147 (436)
T ss_dssp HHHHHHHTSCCCC--BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCc--CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHH
Confidence 0000000 00011 34588877777776678999999999999999999999999999874
No 9
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=97.03 E-value=0.0068 Score=53.79 Aligned_cols=136 Identities=13% Similarity=0.186 Sum_probs=84.1
Q ss_pred CccccCCcccccc-------c--c-cceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec--C-Ce-EEEeC
Q 041969 25 LRNFKLSLMDQIT-------F--P-IYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK--D-DF-SIVCN 90 (209)
Q Consensus 25 ~~~~~LS~lD~~~-------~--~-~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~-~~-~I~~~ 90 (209)
...+|||+.-+.+ + . ..+...+-++..- ..++|++++.+++.++|.|--++. + .+ ++...
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~ 167 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL------ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHE 167 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC------CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC------CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECC
Confidence 3568999875421 1 1 2345555555443 489999999999999999988875 2 21 22222
Q ss_pred CCCceEEEEeeccchhhhcCCCChhhhcCc-ccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHH
Q 041969 91 DQGAEYVEALANGFLSEYLQKPDQKLLRDF-HPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTF 169 (209)
Q Consensus 91 ~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l-~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~f 169 (209)
.....+.... .+-+++.. ....+ -|. +. ...|++.+.+-....+...|.+.+||.++||.|+..+
T Consensus 168 ~~~~~~~~~~--~~~~~~~~-----~~~~~~~~f-----dl--~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l 233 (520)
T 2jgp_A 168 DVPFALAYSE--VTEEEARE-----LVSSLVQPF-----DL--EVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGIL 233 (520)
T ss_dssp CCCCCCEEEE--CCHHHHHH-----HHHHTCCCC-----CT--TSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHH
T ss_pred CCCCceEEEe--CCHHHHHH-----HHHHhcCCC-----CC--CCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHH
Confidence 2222221111 11111110 00000 011 11 3468887777777667789999999999999999999
Q ss_pred HHHHHHHHhcC
Q 041969 170 VNSWTATARAD 180 (209)
Q Consensus 170 l~~Wa~~~rg~ 180 (209)
++.+.+..++.
T Consensus 234 ~~el~~~Y~~~ 244 (520)
T 2jgp_A 234 LAEWVQLYQGD 244 (520)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHccC
Confidence 99999999875
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=96.24 E-value=0.039 Score=47.83 Aligned_cols=139 Identities=9% Similarity=0.023 Sum_probs=80.2
Q ss_pred CccccCCccccc-----cc-ccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec---CCe-EEEeC--CC
Q 041969 25 LRNFKLSLMDQI-----TF-PIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK---DDF-SIVCN--DQ 92 (209)
Q Consensus 25 ~~~~~LS~lD~~-----~~-~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---~~~-~I~~~--~~ 92 (209)
...+|||+..+. .+ .......+.|+... ....++|+++|.+++.+++.|--++. +.+ ++... ..
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g----~ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE----GFDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT----CCCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC----CCCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 356899987652 11 11223333444332 23488999999999999999988886 222 22222 12
Q ss_pred CceEEEEeec--cchhhhcCCCChhhhcCc-ccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHH
Q 041969 93 GAEYVEALAN--GFLSEYLQKPDQKLLRDF-HPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTF 169 (209)
Q Consensus 93 gv~f~~a~~d--~~l~~l~~~p~~~~~~~l-~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~f 169 (209)
...+.+.... ...++... .....+ -|. +. ...|++.+.+-... ++-.|-+.+||.++||.|+..+
T Consensus 91 ~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~f-----dl--~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l 158 (466)
T 2xhg_A 91 LYDFFSYNLTAQPDVQQAIE----AETQRLHSSM-----NL--QEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRIL 158 (466)
T ss_dssp CCEEEEEECTTCSCHHHHHH----HHHHHHHTTC-----CT--TTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHH
T ss_pred cceeEEEecCCcccHHHHHH----HHHHHHHhcc-----CC--CCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHH
Confidence 2333322211 01111000 000000 011 11 44688888777776 4444779999999999999999
Q ss_pred HHHHHHHHhc
Q 041969 170 VNSWTATARA 179 (209)
Q Consensus 170 l~~Wa~~~rg 179 (209)
++.+.+..++
T Consensus 159 ~~el~~~Y~~ 168 (466)
T 2xhg_A 159 FEDLATGYAQ 168 (466)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988864
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=95.73 E-value=0.046 Score=54.31 Aligned_cols=123 Identities=12% Similarity=0.065 Sum_probs=75.6
Q ss_pred eEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceecC-----CeEEEeCCCCceEEEEeeccchhhhcCCCCh--
Q 041969 42 VCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKD-----DFSIVCNDQGAEYVEALANGFLSEYLQKPDQ-- 114 (209)
Q Consensus 42 i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~-----~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~-- 114 (209)
+...+-++.+- ..++|+++|.+++.+++.|--++.. -.++........+.+.. +...++.
T Consensus 37 ~~~~~~l~g~l------d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d-------~~~~~~~~~ 103 (1304)
T 2vsq_A 37 EQITMKVKGSL------NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEID-------LTHLTGSEQ 103 (1304)
T ss_dssp EEEEEEEEECC------CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEE-------CTTSCHHHH
T ss_pred EEEEEEEcCCc------CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEE-------CCCCCchhH
Confidence 44455555443 4899999999999999999888751 12333332223332222 1111100
Q ss_pred -hhhcCcccCcc-ccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 115 -KLLRDFHPFKY-AESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 115 -~~~~~l~P~~~-~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
.....++-... ..-+. ...|++.+.+-....+...|.+.+||.++||.|+..+++.+.+..++
T Consensus 104 ~~~~~~~~~~~~~~~fdl--~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~ 168 (1304)
T 2vsq_A 104 TAKINEYKEQDKIRGFDL--TRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNA 168 (1304)
T ss_dssp HHHHHHHHHHHHHHCCCT--TTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCC--CCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHH
Confidence 00000100000 00011 44688888888887778999999999999999999999999998875
No 12
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=82.94 E-value=0.94 Score=35.84 Aligned_cols=44 Identities=23% Similarity=0.391 Sum_probs=32.6
Q ss_pred CCeeEEEEEEecCCc--EEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969 135 DPMLRIQATFFKCGG--LAIAVCTHHKLIDGSSVGTFVNSWTATAR 178 (209)
Q Consensus 135 ~Pll~vQvt~f~cGG--~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r 178 (209)
.|++.+=.-.-+.|. +-|++++||.+.||.-+..|++.+.+...
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 577754222222243 56899999999999999999999998764
No 13
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=82.28 E-value=1 Score=35.77 Aligned_cols=43 Identities=26% Similarity=0.441 Sum_probs=31.1
Q ss_pred CCeeEEEEEEecCCc--EEEEeccceeccchhhHHHHHHHHHHHH
Q 041969 135 DPMLRIQATFFKCGG--LAIAVCTHHKLIDGSSVGTFVNSWTATA 177 (209)
Q Consensus 135 ~Pll~vQvt~f~cGG--~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~ 177 (209)
.|++.+=.-.-++|. +-|++++||.+.||.-...|++.+.+..
T Consensus 172 ~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 577653211112233 5689999999999999999999998764
No 14
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=81.59 E-value=1.1 Score=35.55 Aligned_cols=45 Identities=20% Similarity=0.412 Sum_probs=33.4
Q ss_pred CCeeEEEEEEecCCc--EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 135 DPMLRIQATFFKCGG--LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 135 ~Pll~vQvt~f~cGG--~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
.|++.+=.-.-++|. +-|++++||.+.||.-...|++.+.+....
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 214 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDE 214 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHhC
Confidence 477654322223233 668999999999999999999999987753
No 15
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=81.41 E-value=1.3 Score=35.57 Aligned_cols=30 Identities=10% Similarity=0.410 Sum_probs=27.6
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 779999999999999999999999988754
No 16
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=79.12 E-value=1.5 Score=35.40 Aligned_cols=30 Identities=13% Similarity=0.327 Sum_probs=27.4
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998764
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=79.02 E-value=1.5 Score=35.12 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=27.5
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998765
No 18
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=78.91 E-value=1.3 Score=35.33 Aligned_cols=31 Identities=19% Similarity=0.423 Sum_probs=27.8
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
+-|+++++|-+.||.-...|++.|.+....-
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~p 217 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIEDP 217 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhCH
Confidence 4489999999999999999999999998753
No 19
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=77.68 E-value=1.7 Score=35.48 Aligned_cols=30 Identities=27% Similarity=0.648 Sum_probs=27.3
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998764
No 20
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=73.43 E-value=2.6 Score=34.30 Aligned_cols=31 Identities=19% Similarity=0.461 Sum_probs=28.2
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhcC
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARAD 180 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg~ 180 (209)
+-|+++++|-+.||.-...|++.|.+....-
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P 240 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKI 240 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhCh
Confidence 4599999999999999999999999998753
No 21
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=72.25 E-value=2.9 Score=33.89 Aligned_cols=30 Identities=17% Similarity=0.449 Sum_probs=27.5
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998874
No 22
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=54.29 E-value=2.6 Score=36.87 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=0.0
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.|.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999988764
No 23
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=53.93 E-value=8.7 Score=34.37 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=25.2
Q ss_pred CchhHHHHHHHHHHHhhccccccCceec
Q 041969 55 KSYQISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 55 ~~~~~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
+..++.++||.|+-.+--++|.+|+++.
T Consensus 70 ~~~~l~~~lr~AW~~lR~~hP~iA~~v~ 97 (519)
T 3fot_A 70 TLQNLKEMFELALLDARFEHPECACTVS 97 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGGCEEE
T ss_pred cHHHHHHHHHHHHHHHHhhCCcceeEEe
Confidence 3578899999999999999999999987
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=43.42 E-value=34 Score=24.50 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=26.8
Q ss_pred EEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec
Q 041969 43 CTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 43 ~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
-....|+.. .++.++++|...+.+-.-+||.+.
T Consensus 84 vm~i~f~gd-------dlea~ekalkemirqarkfagtvt 116 (170)
T 4hhu_A 84 VMVIVFEGD-------DLEALEKALKEMIRQARKFAGTVT 116 (170)
T ss_dssp EEEEEEECS-------CHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEecC-------cHHHHHHHHHHHHHHHHhhcceEE
Confidence 345566654 389999999999999999999986
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=41.34 E-value=33 Score=24.57 Aligned_cols=31 Identities=19% Similarity=0.481 Sum_probs=25.4
Q ss_pred EEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec
Q 041969 45 IFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 45 ~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
...|+..+ ++.++++|...+.+-.-+||.+.
T Consensus 5 ~i~f~gdd-------lea~ekalkemirqarkfagtvt 35 (170)
T 4hhu_A 5 VIVFEGDD-------LEALEKALKEMIRQARKFAGTVT 35 (170)
T ss_dssp EEEEECSC-------HHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEecCc-------HHHHHHHHHHHHHHHHhhcceEE
Confidence 45666543 88999999999999999999986
No 26
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=31.89 E-value=29 Score=34.12 Aligned_cols=30 Identities=17% Similarity=0.412 Sum_probs=26.6
Q ss_pred EEEEeccceeccchhhHHHHHHHHHHHHhc
Q 041969 150 LAIAVCTHHKLIDGSSVGTFVNSWTATARA 179 (209)
Q Consensus 150 ~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~rg 179 (209)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 679999999999999999999888777654
No 27
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=25.25 E-value=1.3e+02 Score=18.93 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhhccccccCceec
Q 041969 59 ISQRLKSSLSKTLTKFYPFAGRLK 82 (209)
Q Consensus 59 ~~~~L~~sL~~~L~~~p~laGrl~ 82 (209)
.++..+++|...+.+-.-+||.+.
T Consensus 11 dleafekalkemirqarkfagtvt 34 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVT 34 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEE
Confidence 478899999999999999999996
Done!