Query 041970
Match_columns 327
No_of_seqs 275 out of 2074
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 21:47:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nxc_A L11 mtase, ribosomal pr 100.0 3.1E-38 1.1E-42 291.2 16.8 201 74-327 2-223 (254)
2 3grz_A L11 mtase, ribosomal pr 99.9 2.3E-21 8E-26 170.2 13.7 137 163-325 1-162 (205)
3 3lec_A NADB-rossmann superfami 99.4 6E-13 2E-17 122.3 10.1 96 207-325 12-128 (230)
4 3dmg_A Probable ribosomal RNA 99.4 1.7E-12 5.7E-17 126.9 13.0 113 185-322 198-340 (381)
5 3gnl_A Uncharacterized protein 99.4 1.4E-12 4.8E-17 120.8 9.9 96 207-325 12-128 (244)
6 3kr9_A SAM-dependent methyltra 99.4 2.2E-12 7.5E-17 118.1 10.0 95 207-324 6-121 (225)
7 4dcm_A Ribosomal RNA large sub 99.3 8.9E-12 3E-16 121.4 8.5 114 184-322 192-334 (375)
8 3fzg_A 16S rRNA methylase; met 99.2 4.9E-12 1.7E-16 113.8 6.0 98 198-321 24-151 (200)
9 3p9n_A Possible methyltransfer 99.2 3.6E-11 1.2E-15 104.1 9.2 104 197-322 20-153 (189)
10 3v97_A Ribosomal RNA large sub 99.2 5.8E-11 2E-15 124.5 11.8 118 183-322 507-657 (703)
11 2igt_A SAM dependent methyltra 99.2 6.3E-11 2.1E-15 113.6 10.8 121 183-321 117-271 (332)
12 4gek_A TRNA (CMO5U34)-methyltr 99.2 5.9E-11 2E-15 109.9 10.2 102 198-324 52-180 (261)
13 3lcv_B Sisomicin-gentamicin re 99.2 4.6E-11 1.6E-15 112.2 9.3 97 198-321 107-235 (281)
14 4dmg_A Putative uncharacterize 99.2 7.5E-11 2.6E-15 115.7 10.5 115 183-321 181-325 (393)
15 3mti_A RRNA methylase; SAM-dep 99.1 1.4E-10 4.8E-15 99.5 10.0 101 200-323 6-136 (185)
16 2esr_A Methyltransferase; stru 99.1 1.5E-10 5.3E-15 98.5 9.2 106 196-323 8-139 (177)
17 2ift_A Putative methylase HI07 99.1 1E-10 3.5E-15 103.1 8.2 114 186-323 24-164 (201)
18 3c0k_A UPF0064 protein YCCW; P 99.1 1.4E-10 4.9E-15 112.8 9.8 120 183-322 188-339 (396)
19 2as0_A Hypothetical protein PH 99.1 1.2E-10 4.2E-15 113.2 8.4 120 183-322 185-335 (396)
20 2frn_A Hypothetical protein PH 99.1 3.3E-10 1.1E-14 105.2 10.6 112 184-323 96-226 (278)
21 3hem_A Cyclopropane-fatty-acyl 99.1 5.9E-10 2E-14 103.4 12.2 86 214-325 70-186 (302)
22 1wxx_A TT1595, hypothetical pr 99.1 1.9E-10 6.5E-15 111.5 8.2 118 183-322 178-325 (382)
23 3k6r_A Putative transferase PH 99.1 4.3E-10 1.5E-14 105.8 9.8 113 183-324 95-227 (278)
24 3frh_A 16S rRNA methylase; met 99.1 4.1E-10 1.4E-14 104.6 9.2 97 198-320 81-204 (253)
25 2fhp_A Methylase, putative; al 99.0 2.2E-10 7.5E-15 97.7 6.6 107 197-322 22-154 (187)
26 2fpo_A Methylase YHHF; structu 99.0 5.7E-10 1.9E-14 98.4 9.2 104 197-323 32-161 (202)
27 1dus_A MJ0882; hypothetical pr 99.0 1.6E-09 5.5E-14 92.0 11.7 100 199-323 37-158 (194)
28 2b78_A Hypothetical protein SM 99.0 6.6E-10 2.3E-14 108.2 10.3 123 183-323 179-332 (385)
29 3njr_A Precorrin-6Y methylase; 99.0 1.3E-09 4.3E-14 96.6 10.5 106 193-324 30-156 (204)
30 3lpm_A Putative methyltransfer 99.0 5.9E-10 2E-14 101.7 8.5 85 216-321 49-175 (259)
31 2b3t_A Protein methyltransfera 99.0 2.3E-09 7.9E-14 98.6 12.3 109 185-321 80-237 (276)
32 2a14_A Indolethylamine N-methy 99.0 1.7E-09 5.9E-14 98.9 10.2 92 215-326 54-201 (263)
33 3f4k_A Putative methyltransfer 99.0 1E-09 3.6E-14 98.4 8.3 104 196-323 27-151 (257)
34 3e05_A Precorrin-6Y C5,15-meth 99.0 2.8E-09 9.6E-14 93.0 10.1 87 214-324 38-144 (204)
35 2yx1_A Hypothetical protein MJ 99.0 2E-09 6.8E-14 102.8 9.9 112 183-324 165-293 (336)
36 3kkz_A Uncharacterized protein 98.9 1.7E-09 5.8E-14 98.3 8.9 104 196-323 27-151 (267)
37 3eey_A Putative rRNA methylase 98.9 3.7E-09 1.3E-13 91.4 10.4 98 203-322 9-139 (197)
38 2pjd_A Ribosomal RNA small sub 98.9 2.2E-09 7.6E-14 102.4 9.8 110 184-322 166-303 (343)
39 3tfw_A Putative O-methyltransf 98.9 9.7E-09 3.3E-13 93.4 12.7 102 203-325 51-173 (248)
40 2b25_A Hypothetical protein; s 98.9 1.3E-09 4.6E-14 103.1 7.0 117 177-322 72-219 (336)
41 3evz_A Methyltransferase; NYSG 98.9 5.9E-09 2E-13 92.3 10.7 88 210-321 49-178 (230)
42 3ntv_A MW1564 protein; rossman 98.9 4.1E-09 1.4E-13 94.7 9.3 88 215-324 70-178 (232)
43 1nkv_A Hypothetical protein YJ 98.9 4.5E-09 1.5E-13 94.2 9.5 98 201-322 19-140 (256)
44 3dr5_A Putative O-methyltransf 98.9 3.4E-09 1.2E-13 95.4 8.5 104 201-324 39-165 (221)
45 1ws6_A Methyltransferase; stru 98.9 2.4E-09 8.1E-14 89.7 7.0 111 186-323 13-148 (171)
46 3duw_A OMT, O-methyltransferas 98.9 7.5E-09 2.6E-13 91.3 10.5 106 201-325 44-170 (223)
47 1nv8_A HEMK protein; class I a 98.9 6.3E-09 2.2E-13 97.2 10.4 109 185-321 93-248 (284)
48 3hm2_A Precorrin-6Y C5,15-meth 98.9 5.2E-09 1.8E-13 88.4 8.6 87 214-324 23-129 (178)
49 3a27_A TYW2, uncharacterized p 98.9 4.4E-09 1.5E-13 97.4 8.7 113 183-324 89-221 (272)
50 3jwg_A HEN1, methyltransferase 98.9 1.1E-08 3.7E-13 89.9 10.8 101 199-321 10-140 (219)
51 1l3i_A Precorrin-6Y methyltran 98.8 6.5E-09 2.2E-13 88.0 8.1 100 201-323 16-135 (192)
52 3lbf_A Protein-L-isoaspartate 98.8 3.5E-09 1.2E-13 92.5 6.5 102 193-321 52-173 (210)
53 3jwh_A HEN1; methyltransferase 98.8 1.7E-08 5.7E-13 88.7 10.9 96 204-321 15-140 (217)
54 3tr6_A O-methyltransferase; ce 98.8 1.5E-08 5E-13 89.4 10.2 104 203-324 52-176 (225)
55 3ocj_A Putative exported prote 98.8 9.9E-09 3.4E-13 95.5 9.4 94 207-324 109-229 (305)
56 3dlc_A Putative S-adenosyl-L-m 98.8 1.5E-08 5E-13 87.8 9.8 75 226-323 72-149 (219)
57 1jsx_A Glucose-inhibited divis 98.8 1.1E-08 3.6E-13 89.0 8.7 80 216-321 65-164 (207)
58 3fpf_A Mtnas, putative unchara 98.8 9.2E-09 3.2E-13 97.8 8.8 83 214-322 120-222 (298)
59 3u81_A Catechol O-methyltransf 98.8 2.9E-08 1E-12 88.0 11.6 101 203-325 46-173 (221)
60 3bzb_A Uncharacterized protein 98.8 1.1E-08 3.9E-13 94.8 9.3 106 200-321 61-204 (281)
61 1kpg_A CFA synthase;, cyclopro 98.8 2.9E-08 9.8E-13 90.9 11.5 98 201-324 47-170 (287)
62 1ve3_A Hypothetical protein PH 98.8 2.7E-08 9.1E-13 87.2 10.8 98 200-322 22-142 (227)
63 2ozv_A Hypothetical protein AT 98.8 5.9E-09 2E-13 95.7 6.8 91 215-321 35-169 (260)
64 2o57_A Putative sarcosine dime 98.8 2.3E-08 7.7E-13 92.0 10.8 104 198-324 58-189 (297)
65 1o9g_A RRNA methyltransferase; 98.8 6.7E-09 2.3E-13 93.9 7.0 36 287-322 167-214 (250)
66 3lcc_A Putative methyl chlorid 98.8 1.3E-08 4.6E-13 90.4 8.7 94 206-323 56-172 (235)
67 2gpy_A O-methyltransferase; st 98.8 2.4E-08 8.3E-13 88.9 9.9 89 215-323 53-161 (233)
68 3d2l_A SAM-dependent methyltra 98.8 3.9E-08 1.3E-12 87.0 10.9 92 204-321 21-136 (243)
69 3c3p_A Methyltransferase; NP_9 98.8 2.5E-08 8.4E-13 87.5 9.2 100 201-324 42-162 (210)
70 3ofk_A Nodulation protein S; N 98.8 3.4E-08 1.2E-12 86.4 10.1 97 199-322 31-154 (216)
71 1dl5_A Protein-L-isoaspartate 98.7 8.6E-09 2.9E-13 97.1 6.3 108 186-322 45-175 (317)
72 3bus_A REBM, methyltransferase 98.7 5E-08 1.7E-12 88.3 11.1 99 203-324 46-168 (273)
73 1yzh_A TRNA (guanine-N(7)-)-me 98.7 3.3E-08 1.1E-12 87.1 9.7 75 226-322 71-156 (214)
74 3vc1_A Geranyl diphosphate 2-C 98.7 3.9E-08 1.3E-12 91.8 10.7 86 215-323 116-222 (312)
75 2fk8_A Methoxy mycolic acid sy 98.7 6.9E-08 2.4E-12 89.9 12.2 95 204-324 76-196 (318)
76 1xxl_A YCGJ protein; structura 98.7 3.6E-08 1.2E-12 88.3 9.7 99 199-323 6-125 (239)
77 3g07_A 7SK snRNA methylphospha 98.7 1E-08 3.5E-13 95.4 6.3 36 286-321 175-219 (292)
78 4htf_A S-adenosylmethionine-de 98.7 2.8E-08 9.5E-13 91.0 9.1 94 208-323 60-174 (285)
79 1xdz_A Methyltransferase GIDB; 98.7 2.3E-08 8E-13 89.9 8.4 85 215-321 69-173 (240)
80 3m70_A Tellurite resistance pr 98.7 4.3E-08 1.5E-12 89.8 10.2 92 203-322 109-223 (286)
81 2yxd_A Probable cobalt-precorr 98.7 2.9E-08 9.9E-13 83.5 8.4 99 197-323 14-132 (183)
82 2kw5_A SLR1183 protein; struct 98.7 1.1E-07 3.7E-12 82.3 12.1 85 214-324 28-133 (202)
83 4dzr_A Protein-(glutamine-N5) 98.7 7.6E-09 2.6E-13 89.4 4.7 100 200-320 11-163 (215)
84 1ri5_A MRNA capping enzyme; me 98.7 6E-08 2.1E-12 88.4 10.9 90 211-322 59-174 (298)
85 1jg1_A PIMT;, protein-L-isoasp 98.7 1.6E-08 5.6E-13 90.5 6.9 104 191-321 64-188 (235)
86 3g89_A Ribosomal RNA small sub 98.7 1.5E-08 5.1E-13 92.8 6.8 75 226-322 110-185 (249)
87 2jjq_A Uncharacterized RNA met 98.7 5E-08 1.7E-12 96.5 10.8 109 184-322 260-387 (425)
88 3r3h_A O-methyltransferase, SA 98.7 1.1E-08 3.8E-13 93.1 5.5 104 203-324 48-172 (242)
89 3mb5_A SAM-dependent methyltra 98.7 4.1E-08 1.4E-12 88.3 8.9 84 214-323 91-195 (255)
90 1vl5_A Unknown conserved prote 98.7 3.1E-08 1.1E-12 89.4 7.9 85 215-323 36-141 (260)
91 3sm3_A SAM-dependent methyltra 98.7 8.7E-09 3E-13 90.4 3.9 93 209-323 23-142 (235)
92 2avd_A Catechol-O-methyltransf 98.7 4.3E-08 1.5E-12 86.7 8.4 101 206-324 60-181 (229)
93 1sui_A Caffeoyl-COA O-methyltr 98.7 8E-08 2.7E-12 87.7 10.4 105 203-324 67-192 (247)
94 3pfg_A N-methyltransferase; N, 98.7 5.4E-08 1.8E-12 87.9 9.0 92 200-321 34-150 (263)
95 3c3y_A Pfomt, O-methyltransfer 98.7 3.5E-08 1.2E-12 89.2 7.8 105 203-324 58-183 (237)
96 1y8c_A S-adenosylmethionine-de 98.7 6.4E-08 2.2E-12 85.4 9.3 93 203-321 24-141 (246)
97 2hnk_A SAM-dependent O-methylt 98.7 5E-08 1.7E-12 87.5 8.7 98 215-324 59-183 (239)
98 2h00_A Methyltransferase 10 do 98.6 1.2E-08 4.1E-13 92.1 4.0 56 201-259 46-125 (254)
99 3cbg_A O-methyltransferase; cy 98.6 6.1E-08 2.1E-12 87.1 8.6 102 203-324 60-184 (232)
100 2xvm_A Tellurite resistance pr 98.6 1.1E-07 3.9E-12 81.3 9.8 82 216-322 32-136 (199)
101 2pxx_A Uncharacterized protein 98.6 6.3E-08 2.1E-12 83.7 8.2 93 205-323 31-160 (215)
102 3dh0_A SAM dependent methyltra 98.6 1.1E-07 3.7E-12 83.2 9.6 87 214-324 35-145 (219)
103 1i1n_A Protein-L-isoaspartate 98.6 2.7E-08 9.1E-13 88.0 5.6 94 203-321 64-181 (226)
104 3ldu_A Putative methylase; str 98.6 3.7E-07 1.3E-11 89.0 14.2 36 69-104 2-37 (385)
105 3ujc_A Phosphoethanolamine N-m 98.6 2.1E-08 7.3E-13 89.7 4.9 85 214-324 53-161 (266)
106 3gdh_A Trimethylguanosine synt 98.6 1.6E-09 5.4E-14 96.8 -2.6 100 195-319 58-178 (241)
107 4fsd_A Arsenic methyltransfera 98.6 7.5E-08 2.6E-12 93.1 8.9 95 214-324 81-205 (383)
108 1zx0_A Guanidinoacetate N-meth 98.6 1.2E-07 3.9E-12 84.8 9.5 86 213-321 57-169 (236)
109 1ixk_A Methyltransferase; open 98.6 1E-07 3.5E-12 90.2 9.7 97 201-323 105-247 (315)
110 3htx_A HEN1; HEN1, small RNA m 98.6 1.4E-07 4.8E-12 100.4 11.6 111 187-322 690-834 (950)
111 2ex4_A Adrenal gland protein A 98.6 6.9E-08 2.3E-12 86.3 7.5 84 216-323 79-186 (241)
112 3r0q_C Probable protein argini 98.6 6.5E-08 2.2E-12 93.7 7.9 96 202-322 47-169 (376)
113 2yxe_A Protein-L-isoaspartate 98.6 4.5E-08 1.5E-12 85.7 6.1 102 193-321 52-176 (215)
114 1vbf_A 231AA long hypothetical 98.6 2.9E-08 9.9E-13 87.8 5.0 101 193-322 45-165 (231)
115 3bt7_A TRNA (uracil-5-)-methyl 98.6 1.7E-07 5.8E-12 90.4 10.8 120 185-321 182-325 (369)
116 1uwv_A 23S rRNA (uracil-5-)-me 98.6 2.2E-07 7.5E-12 91.7 11.7 117 184-322 253-389 (433)
117 1wzn_A SAM-dependent methyltra 98.6 2.6E-07 9E-12 82.5 11.1 81 215-321 40-144 (252)
118 3uwp_A Histone-lysine N-methyl 98.6 1.6E-07 5.3E-12 93.4 10.0 88 214-322 171-288 (438)
119 3dtn_A Putative methyltransfer 98.6 2E-07 6.7E-12 82.4 9.7 83 215-324 43-150 (234)
120 2fyt_A Protein arginine N-meth 98.6 2.1E-07 7.3E-12 88.8 10.4 90 206-319 52-168 (340)
121 3orh_A Guanidinoacetate N-meth 98.6 1.6E-07 5.6E-12 84.7 8.9 86 214-322 58-170 (236)
122 3thr_A Glycine N-methyltransfe 98.6 3.9E-08 1.3E-12 90.1 4.8 88 215-321 56-174 (293)
123 3m4x_A NOL1/NOP2/SUN family pr 98.6 1.2E-07 4.1E-12 94.9 8.7 97 201-322 92-234 (456)
124 2pbf_A Protein-L-isoaspartate 98.6 4.9E-08 1.7E-12 86.3 5.1 99 202-321 66-192 (227)
125 3e23_A Uncharacterized protein 98.5 1.3E-07 4.4E-12 82.5 7.6 79 213-322 40-141 (211)
126 2yvl_A TRMI protein, hypotheti 98.5 2.6E-07 9E-12 82.2 9.7 83 215-322 90-190 (248)
127 3g2m_A PCZA361.24; SAM-depende 98.5 2.5E-07 8.6E-12 85.5 9.8 93 207-322 73-190 (299)
128 2p8j_A S-adenosylmethionine-de 98.5 2.7E-07 9.2E-12 79.9 9.4 85 214-323 21-129 (209)
129 2i62_A Nicotinamide N-methyltr 98.5 3.5E-07 1.2E-11 81.8 10.4 91 215-325 55-201 (265)
130 2p7i_A Hypothetical protein; p 98.5 1.2E-07 4.2E-12 83.4 7.2 90 203-322 30-141 (250)
131 4hc4_A Protein arginine N-meth 98.5 1.2E-07 4.2E-12 92.6 7.9 93 204-321 69-188 (376)
132 2g72_A Phenylethanolamine N-me 98.5 4E-07 1.4E-11 83.7 10.8 40 286-325 172-218 (289)
133 3tma_A Methyltransferase; thum 98.5 3.4E-07 1.2E-11 87.3 10.7 83 215-321 202-316 (354)
134 1xtp_A LMAJ004091AAA; SGPP, st 98.5 2.4E-07 8.2E-12 82.6 8.9 82 215-322 92-197 (254)
135 3axs_A Probable N(2),N(2)-dime 98.5 1.6E-07 5.6E-12 92.2 8.4 85 215-321 51-157 (392)
136 3mgg_A Methyltransferase; NYSG 98.5 1.9E-07 6.6E-12 84.7 8.3 84 215-322 36-142 (276)
137 3q7e_A Protein arginine N-meth 98.5 2.4E-07 8.1E-12 88.8 9.2 84 214-321 64-172 (349)
138 3l8d_A Methyltransferase; stru 98.5 1.7E-07 5.8E-12 83.0 7.6 93 204-323 41-154 (242)
139 2gb4_A Thiopurine S-methyltran 98.5 2E-07 7E-12 85.6 8.3 96 207-323 57-192 (252)
140 3adn_A Spermidine synthase; am 98.5 1.9E-07 6.4E-12 88.0 8.1 116 186-322 52-198 (294)
141 3b3j_A Histone-arginine methyl 98.5 2.4E-07 8.1E-12 93.0 9.3 93 203-320 143-261 (480)
142 3g5t_A Trans-aconitate 3-methy 98.5 3.6E-07 1.2E-11 84.4 9.8 100 206-322 25-149 (299)
143 3hnr_A Probable methyltransfer 98.5 2.8E-07 9.4E-12 80.6 8.5 87 205-322 36-145 (220)
144 1yb2_A Hypothetical protein TA 98.5 2.1E-07 7.3E-12 85.4 8.1 71 226-323 141-212 (275)
145 2yqz_A Hypothetical protein TT 98.5 2.6E-07 8.9E-12 82.6 8.2 94 203-321 23-140 (263)
146 2vdw_A Vaccinia virus capping 98.5 4.7E-07 1.6E-11 85.3 10.2 94 216-323 48-170 (302)
147 3k0b_A Predicted N6-adenine-sp 98.5 4.7E-06 1.6E-10 81.6 17.7 69 226-318 269-346 (393)
148 3cgg_A SAM-dependent methyltra 98.5 2.6E-07 8.9E-12 78.2 7.7 86 208-322 38-147 (195)
149 3bgv_A MRNA CAP guanine-N7 met 98.5 4.9E-07 1.7E-11 84.2 10.2 91 215-322 33-155 (313)
150 3ou2_A SAM-dependent methyltra 98.5 1.7E-07 5.7E-12 81.4 6.5 91 203-323 34-147 (218)
151 1pjz_A Thiopurine S-methyltran 98.5 2.4E-07 8.4E-12 81.5 7.6 96 205-322 10-140 (203)
152 1nt2_A Fibrillarin-like PRE-rR 98.5 1.9E-07 6.4E-12 83.2 6.9 85 214-321 55-160 (210)
153 1inl_A Spermidine synthase; be 98.5 2.4E-07 8.2E-12 86.9 7.9 86 215-321 89-204 (296)
154 3gu3_A Methyltransferase; alph 98.5 3.6E-07 1.2E-11 84.1 8.9 82 215-322 21-126 (284)
155 3ajd_A Putative methyltransfer 98.5 8.2E-08 2.8E-12 88.7 4.5 97 203-322 72-211 (274)
156 2fca_A TRNA (guanine-N(7)-)-me 98.5 3.5E-07 1.2E-11 81.2 8.5 75 226-322 68-153 (213)
157 3dxy_A TRNA (guanine-N(7)-)-me 98.5 2.3E-07 7.9E-12 83.2 7.2 76 226-322 64-150 (218)
158 2pt6_A Spermidine synthase; tr 98.5 2.7E-07 9.1E-12 87.9 8.1 86 215-321 115-229 (321)
159 1o54_A SAM-dependent O-methylt 98.5 3.2E-07 1.1E-11 84.1 8.3 83 214-322 110-213 (277)
160 1u2z_A Histone-lysine N-methyl 98.5 6.8E-07 2.3E-11 88.9 11.3 91 214-322 240-359 (433)
161 2gs9_A Hypothetical protein TT 98.5 3.8E-07 1.3E-11 79.3 8.2 91 204-323 24-133 (211)
162 3g5l_A Putative S-adenosylmeth 98.5 3.1E-07 1.1E-11 82.3 7.7 88 207-321 33-144 (253)
163 1iy9_A Spermidine synthase; ro 98.5 2.9E-07 1E-11 85.5 7.8 86 215-321 74-188 (275)
164 3bxo_A N,N-dimethyltransferase 98.4 7E-07 2.4E-11 78.6 9.7 92 201-322 25-141 (239)
165 3m33_A Uncharacterized protein 98.4 1.4E-07 4.6E-12 83.9 4.9 88 203-320 35-140 (226)
166 3ggd_A SAM-dependent methyltra 98.4 4.9E-07 1.7E-11 80.6 8.5 102 201-324 41-165 (245)
167 3m6w_A RRNA methylase; rRNA me 98.4 3.2E-07 1.1E-11 92.0 8.0 96 201-322 88-229 (464)
168 2frx_A Hypothetical protein YE 98.4 6E-07 2E-11 90.2 9.7 101 200-323 101-247 (479)
169 1i9g_A Hypothetical protein RV 98.4 5.7E-07 1.9E-11 81.9 8.7 85 214-323 97-204 (280)
170 1xj5_A Spermidine synthase 1; 98.4 2.5E-07 8.6E-12 88.8 6.6 117 185-321 88-234 (334)
171 2y1w_A Histone-arginine methyl 98.4 6.3E-07 2.2E-11 85.7 9.4 82 215-321 49-154 (348)
172 1g6q_1 HnRNP arginine N-methyl 98.4 7E-07 2.4E-11 84.7 9.6 83 214-320 36-143 (328)
173 2p35_A Trans-aconitate 2-methy 98.4 4.5E-07 1.5E-11 81.0 7.8 89 204-322 20-132 (259)
174 1r18_A Protein-L-isoaspartate( 98.4 1.5E-07 5.1E-12 83.6 4.5 94 203-321 71-193 (227)
175 3iv6_A Putative Zn-dependent a 98.4 3.1E-07 1E-11 85.5 6.7 82 214-321 43-147 (261)
176 2r3s_A Uncharacterized protein 98.4 5.1E-07 1.8E-11 84.3 8.3 85 215-324 164-273 (335)
177 1tw3_A COMT, carminomycin 4-O- 98.4 2.9E-07 9.8E-12 87.3 6.6 84 215-324 182-290 (360)
178 2ipx_A RRNA 2'-O-methyltransfe 98.4 8.3E-07 2.8E-11 79.0 9.1 84 215-321 76-181 (233)
179 2dul_A N(2),N(2)-dimethylguano 98.4 6.1E-07 2.1E-11 87.5 8.9 83 216-322 47-164 (378)
180 3bwc_A Spermidine synthase; SA 98.4 5.6E-07 1.9E-11 84.7 8.2 88 215-322 94-210 (304)
181 4hg2_A Methyltransferase type 98.4 2.7E-07 9.1E-12 85.2 5.8 88 205-322 28-135 (257)
182 1g8a_A Fibrillarin-like PRE-rR 98.4 4.8E-07 1.6E-11 80.0 7.2 84 215-321 72-177 (227)
183 2b2c_A Spermidine synthase; be 98.4 5.7E-07 2E-11 85.5 8.1 87 215-322 107-222 (314)
184 2pwy_A TRNA (adenine-N(1)-)-me 98.4 7.1E-07 2.4E-11 79.8 8.1 83 214-322 94-198 (258)
185 3bkx_A SAM-dependent methyltra 98.4 1.1E-06 3.9E-11 79.4 9.4 103 201-324 27-161 (275)
186 2avn_A Ubiquinone/menaquinone 98.4 9.1E-07 3.1E-11 80.1 8.5 89 204-322 42-152 (260)
187 1uir_A Polyamine aminopropyltr 98.4 6.9E-07 2.4E-11 84.5 8.0 86 215-321 76-194 (314)
188 2ld4_A Anamorsin; methyltransf 98.4 2.4E-07 8.1E-12 78.8 4.3 84 214-322 10-101 (176)
189 3h2b_A SAM-dependent methyltra 98.4 8E-07 2.7E-11 76.8 7.7 78 217-323 42-142 (203)
190 3tm4_A TRNA (guanine N2-)-meth 98.4 1.2E-06 4.2E-11 84.6 9.7 84 214-321 215-329 (373)
191 1mjf_A Spermidine synthase; sp 98.4 9.8E-07 3.4E-11 82.0 8.7 85 215-321 74-192 (281)
192 2o07_A Spermidine synthase; st 98.3 6E-07 2.1E-11 84.8 7.2 87 215-322 94-209 (304)
193 3bkw_A MLL3908 protein, S-aden 98.3 5.6E-07 1.9E-11 79.5 6.6 80 216-322 43-144 (243)
194 3q87_B N6 adenine specific DNA 98.3 8E-07 2.7E-11 76.0 7.1 88 201-323 8-124 (170)
195 3i9f_A Putative type 11 methyl 98.3 8.5E-07 2.9E-11 74.5 7.1 79 214-324 15-114 (170)
196 1fbn_A MJ fibrillarin homologu 98.3 1E-06 3.5E-11 78.6 7.9 84 215-321 73-177 (230)
197 3gwz_A MMCR; methyltransferase 98.3 3.1E-06 1.1E-10 81.2 11.7 84 215-324 201-309 (369)
198 3dp7_A SAM-dependent methyltra 98.3 3E-06 1E-10 81.1 11.6 86 215-324 178-289 (363)
199 3mcz_A O-methyltransferase; ad 98.3 1.2E-06 4.1E-11 82.7 8.5 94 208-324 169-289 (352)
200 2aot_A HMT, histamine N-methyl 98.3 1.2E-06 4.1E-11 80.8 8.0 80 226-321 88-171 (292)
201 2vdv_E TRNA (guanine-N(7)-)-me 98.3 1.3E-06 4.4E-11 78.8 7.7 75 226-321 79-172 (246)
202 2qm3_A Predicted methyltransfe 98.3 5.8E-06 2E-10 79.7 12.7 74 226-321 201-277 (373)
203 2yxl_A PH0851 protein, 450AA l 98.3 1.7E-06 5.8E-11 85.7 9.0 106 194-323 235-390 (450)
204 1qzz_A RDMB, aclacinomycin-10- 98.3 1.5E-06 5.1E-11 82.6 8.3 83 215-323 181-288 (374)
205 3i53_A O-methyltransferase; CO 98.3 1.7E-06 5.8E-11 81.3 8.3 83 216-324 169-276 (332)
206 1x19_A CRTF-related protein; m 98.3 2.4E-06 8.3E-11 81.2 9.2 103 195-323 166-296 (359)
207 2okc_A Type I restriction enzy 98.3 1.1E-06 3.9E-11 86.7 7.0 72 226-320 214-305 (445)
208 3dli_A Methyltransferase; PSI- 98.2 1.2E-06 4.3E-11 78.0 6.5 80 214-323 39-141 (240)
209 2f8l_A Hypothetical protein LM 98.2 1.1E-06 3.6E-11 83.6 6.0 70 226-321 165-255 (344)
210 1sqg_A SUN protein, FMU protei 98.2 1.9E-06 6.5E-11 84.7 7.6 98 200-322 232-374 (429)
211 1wy7_A Hypothetical protein PH 98.2 2.7E-06 9.1E-11 73.8 7.6 74 215-318 48-145 (207)
212 2i7c_A Spermidine synthase; tr 98.2 2.3E-06 7.9E-11 79.6 7.6 87 215-322 77-192 (283)
213 3ckk_A TRNA (guanine-N(7)-)-me 98.2 2.4E-06 8.3E-11 77.4 7.2 75 226-321 76-167 (235)
214 4df3_A Fibrillarin-like rRNA/T 98.2 2.6E-06 9E-11 78.1 7.5 85 214-321 75-181 (233)
215 3ccf_A Cyclopropane-fatty-acyl 98.2 1.6E-06 5.5E-11 79.1 5.9 78 215-322 56-154 (279)
216 3gjy_A Spermidine synthase; AP 98.2 1.4E-06 4.7E-11 83.4 5.5 102 199-322 67-200 (317)
217 3id6_C Fibrillarin-like rRNA/T 98.2 4.5E-06 1.5E-10 76.3 8.6 85 214-321 74-180 (232)
218 3p2e_A 16S rRNA methylase; met 98.2 1.8E-06 6E-11 77.7 5.8 89 209-320 17-137 (225)
219 2ip2_A Probable phenazine-spec 98.2 4E-06 1.4E-10 78.5 8.2 81 218-324 169-274 (334)
220 1vlm_A SAM-dependent methyltra 98.1 5.2E-06 1.8E-10 73.0 8.3 86 206-323 38-140 (219)
221 2qe6_A Uncharacterized protein 98.1 1.1E-05 3.7E-10 74.7 10.7 84 226-324 110-198 (274)
222 3e8s_A Putative SAM dependent 98.1 2.2E-06 7.5E-11 74.4 5.2 83 215-323 51-153 (227)
223 1ne2_A Hypothetical protein TA 98.1 8.1E-06 2.8E-10 70.6 8.2 91 195-319 30-144 (200)
224 3mq2_A 16S rRNA methyltransfer 98.1 4E-06 1.4E-10 73.5 6.2 91 204-321 17-139 (218)
225 1p91_A Ribosomal RNA large sub 98.1 5.7E-06 2E-10 74.7 7.3 89 201-322 69-178 (269)
226 1zq9_A Probable dimethyladenos 98.1 7.2E-06 2.5E-10 76.3 7.9 62 215-301 27-106 (285)
227 3cvo_A Methyltransferase-like 98.1 2.3E-05 7.9E-10 70.4 10.7 106 209-324 23-156 (202)
228 2cmg_A Spermidine synthase; tr 98.1 3.2E-06 1.1E-10 78.2 5.1 80 215-321 71-170 (262)
229 3ege_A Putative methyltransfer 98.0 4.4E-06 1.5E-10 75.7 5.4 87 206-323 22-131 (261)
230 3ldg_A Putative uncharacterize 98.0 3.1E-05 1.1E-09 75.6 10.6 70 226-319 262-340 (384)
231 2h1r_A Dimethyladenosine trans 98.0 2.6E-05 9E-10 73.1 9.6 71 203-301 31-119 (299)
232 1af7_A Chemotaxis receptor met 98.0 1.7E-05 5.7E-10 74.1 8.1 35 286-320 211-250 (274)
233 2b9e_A NOL1/NOP2/SUN domain fa 97.9 4.7E-05 1.6E-09 72.1 10.8 98 201-322 89-234 (309)
234 3cc8_A Putative methyltransfer 97.9 8.4E-06 2.9E-10 70.8 5.0 79 215-322 31-130 (230)
235 2bm8_A Cephalosporin hydroxyla 97.9 1.1E-05 3.8E-10 72.9 4.8 96 201-322 67-187 (236)
236 2qfm_A Spermine synthase; sper 97.8 1.7E-05 5.8E-10 77.2 5.5 117 186-321 159-313 (364)
237 2ih2_A Modification methylase 97.8 1E-05 3.5E-10 77.9 3.5 90 197-320 18-162 (421)
238 3hp7_A Hemolysin, putative; st 97.8 3.1E-06 1.1E-10 80.0 -0.5 125 168-321 34-184 (291)
239 3lkd_A Type I restriction-modi 97.7 0.0001 3.6E-09 75.0 10.3 75 226-319 254-355 (542)
240 3dou_A Ribosomal RNA large sub 97.7 4.9E-05 1.7E-09 66.5 6.8 35 287-321 90-138 (191)
241 3giw_A Protein of unknown func 97.7 6.4E-05 2.2E-09 70.6 7.7 94 218-324 80-202 (277)
242 2ar0_A M.ecoki, type I restric 97.7 4.4E-05 1.5E-09 77.6 7.0 74 226-320 217-310 (541)
243 3lst_A CALO1 methyltransferase 97.7 2.4E-05 8.4E-10 74.1 4.6 81 215-324 183-288 (348)
244 1ej0_A FTSJ; methyltransferase 97.7 1.7E-05 5.7E-10 65.5 3.0 40 286-325 86-139 (180)
245 4e2x_A TCAB9; kijanose, tetron 97.7 1.9E-05 6.6E-10 76.3 3.9 81 215-321 106-207 (416)
246 4azs_A Methyltransferase WBDD; 97.7 0.00011 3.8E-09 74.7 9.2 96 207-324 57-175 (569)
247 3khk_A Type I restriction-modi 97.6 9E-05 3.1E-09 75.5 7.7 72 226-319 289-392 (544)
248 3sso_A Methyltransferase; macr 97.6 8.7E-05 3E-09 73.4 6.9 39 286-324 286-326 (419)
249 3opn_A Putative hemolysin; str 97.6 3.7E-06 1.3E-10 76.3 -3.1 81 216-321 37-136 (232)
250 2p41_A Type II methyltransfera 97.5 4.1E-05 1.4E-09 72.3 3.4 36 286-321 146-190 (305)
251 2xyq_A Putative 2'-O-methyl tr 97.5 6.1E-05 2.1E-09 71.0 4.5 38 286-323 121-172 (290)
252 2plw_A Ribosomal RNA methyltra 97.5 0.00011 3.9E-09 63.0 5.9 38 286-323 104-155 (201)
253 3v97_A Ribosomal RNA large sub 97.5 0.00054 1.9E-08 71.7 12.0 73 227-320 263-345 (703)
254 4a6d_A Hydroxyindole O-methylt 97.4 0.00037 1.3E-08 66.5 8.7 83 215-324 178-285 (353)
255 3tqs_A Ribosomal RNA small sub 97.4 0.00071 2.4E-08 62.3 10.2 71 214-307 27-115 (255)
256 3gru_A Dimethyladenosine trans 97.4 0.00033 1.1E-08 66.0 7.8 63 214-302 48-128 (295)
257 2zfu_A Nucleomethylin, cerebra 97.4 0.00013 4.4E-09 63.4 4.5 38 286-323 113-152 (215)
258 2wa2_A Non-structural protein 97.4 3.5E-05 1.2E-09 71.8 0.7 37 286-322 146-193 (276)
259 3s1s_A Restriction endonucleas 97.3 0.00023 7.9E-09 75.7 6.7 74 226-320 354-463 (878)
260 2oxt_A Nucleoside-2'-O-methylt 97.3 4E-05 1.4E-09 70.9 0.6 37 286-322 138-185 (265)
261 3ll7_A Putative methyltransfer 97.3 0.00016 5.4E-09 71.4 4.8 63 213-297 90-172 (410)
262 1fp1_D Isoliquiritigenin 2'-O- 97.3 0.00021 7E-09 68.3 4.8 96 195-324 185-308 (372)
263 1fp2_A Isoflavone O-methyltran 97.2 0.00023 7.7E-09 67.4 4.9 96 195-324 164-290 (352)
264 3reo_A (ISO)eugenol O-methyltr 97.2 0.00036 1.2E-08 66.9 6.1 96 195-324 179-302 (368)
265 3p9c_A Caffeic acid O-methyltr 97.2 0.00041 1.4E-08 66.4 6.5 96 195-324 177-300 (364)
266 2r6z_A UPF0341 protein in RSP 97.2 0.00011 3.9E-09 67.6 2.3 72 203-297 72-170 (258)
267 4fzv_A Putative methyltransfer 97.1 0.0018 6.1E-08 62.8 9.7 98 201-321 135-283 (359)
268 4gqb_A Protein arginine N-meth 97.0 0.00087 3E-08 69.6 6.3 69 226-319 391-464 (637)
269 1m6y_A S-adenosyl-methyltransf 96.9 0.00092 3.1E-08 63.1 5.7 64 214-297 24-107 (301)
270 1qam_A ERMC' methyltransferase 96.8 0.0053 1.8E-07 55.4 9.9 49 205-259 17-85 (244)
271 3ufb_A Type I restriction-modi 96.8 0.0044 1.5E-07 62.7 10.0 53 226-298 260-312 (530)
272 1zg3_A Isoflavanone 4'-O-methy 96.8 0.00092 3.2E-08 63.3 4.4 83 208-324 182-295 (358)
273 1yub_A Ermam, rRNA methyltrans 96.8 9.5E-05 3.2E-09 66.7 -2.4 79 215-319 28-142 (245)
274 3ua3_A Protein arginine N-meth 96.4 0.0044 1.5E-07 65.1 7.1 75 226-319 452-531 (745)
275 3ftd_A Dimethyladenosine trans 96.3 0.014 4.8E-07 53.2 9.2 68 215-309 30-116 (249)
276 3fut_A Dimethyladenosine trans 96.2 0.0054 1.9E-07 57.0 5.5 60 214-300 45-122 (271)
277 3o4f_A Spermidine synthase; am 95.9 0.02 6.8E-07 54.1 8.0 114 186-320 52-196 (294)
278 1g60_A Adenine-specific methyl 95.8 0.0079 2.7E-07 54.8 4.8 48 198-245 191-259 (260)
279 2oyr_A UPF0341 protein YHIQ; a 95.7 0.0026 8.9E-08 58.8 1.1 61 215-297 85-173 (258)
280 2zig_A TTHA0409, putative modi 95.7 0.0072 2.5E-07 56.2 4.0 48 196-243 212-280 (297)
281 3uzu_A Ribosomal RNA small sub 95.7 0.047 1.6E-06 50.7 9.5 70 215-308 41-134 (279)
282 2wk1_A NOVP; transferase, O-me 95.5 0.05 1.7E-06 50.9 9.2 72 232-323 173-245 (282)
283 3cjs_A L11 mtase, ribosomal pr 95.4 0.029 9.9E-07 40.5 5.3 56 76-157 4-59 (59)
284 1qyr_A KSGA, high level kasuga 95.3 0.023 7.8E-07 52.0 6.0 28 226-259 49-76 (252)
285 3c6k_A Spermine synthase; sper 94.2 0.057 1.9E-06 52.8 6.0 87 216-320 205-329 (381)
286 4dcm_A Ribosomal RNA large sub 92.5 0.63 2.1E-05 44.7 10.2 68 229-322 67-136 (375)
287 3b5i_A S-adenosyl-L-methionine 91.6 0.11 3.9E-06 50.3 3.8 21 303-323 206-226 (374)
288 2qy6_A UPF0209 protein YFCK; s 91.4 0.38 1.3E-05 44.0 6.9 34 287-320 172-211 (257)
289 1wg8_A Predicted S-adenosylmet 89.6 0.34 1.2E-05 45.5 5.0 74 187-297 25-98 (285)
290 3trk_A Nonstructural polyprote 89.5 0.26 8.9E-06 46.2 4.0 37 287-323 210-260 (324)
291 2px2_A Genome polyprotein [con 89.4 0.23 7.9E-06 46.2 3.5 34 286-320 137-181 (269)
292 3gcz_A Polyprotein; flavivirus 89.0 0.14 4.7E-06 48.1 1.7 36 286-321 154-200 (282)
293 2nyu_A Putative ribosomal RNA 88.3 0.23 7.8E-06 41.7 2.5 37 287-323 96-146 (196)
294 2k4m_A TR8_protein, UPF0146 pr 87.8 0.43 1.5E-05 40.9 3.9 19 207-225 26-44 (153)
295 4auk_A Ribosomal RNA large sub 85.5 1.7 5.7E-05 42.3 7.2 13 213-225 208-220 (375)
296 1boo_A Protein (N-4 cytosine-s 83.8 0.5 1.7E-05 44.3 2.6 51 195-245 228-299 (323)
297 4gua_A Non-structural polyprot 82.6 1.1 3.8E-05 45.9 4.6 41 283-323 216-270 (670)
298 2efj_A 3,7-dimethylxanthine me 81.1 3.8 0.00013 39.7 7.8 19 305-323 208-226 (384)
299 2zig_A TTHA0409, putative modi 80.1 1.2 4.2E-05 40.9 3.8 36 286-321 38-96 (297)
300 4b7c_A Probable oxidoreductase 75.7 10 0.00034 34.8 8.6 131 167-325 89-251 (336)
301 2uyo_A Hypothetical protein ML 73.7 37 0.0013 31.4 12.1 112 198-324 83-220 (310)
302 1v3u_A Leukotriene B4 12- hydr 72.1 12 0.00042 34.1 8.2 34 287-324 213-246 (333)
303 2oo3_A Protein involved in cat 70.7 5.3 0.00018 37.3 5.4 73 226-320 119-196 (283)
304 3tka_A Ribosomal RNA small sub 67.6 4.5 0.00015 38.9 4.2 77 187-296 60-136 (347)
305 2hwk_A Helicase NSP2; rossman 67.1 4 0.00014 38.6 3.6 37 287-323 205-255 (320)
306 1boo_A Protein (N-4 cytosine-s 66.6 4.1 0.00014 38.0 3.7 36 286-321 31-83 (323)
307 4ej6_A Putative zinc-binding d 59.5 10 0.00035 35.6 5.1 36 287-325 252-287 (370)
308 1g60_A Adenine-specific methyl 57.1 7.1 0.00024 34.9 3.4 36 286-321 21-73 (260)
309 3evf_A RNA-directed RNA polyme 56.1 10 0.00034 35.3 4.3 36 286-321 138-183 (277)
310 1eg2_A Modification methylase 52.9 10 0.00034 35.5 3.8 47 198-244 221-291 (319)
311 2cz4_A Hypothetical protein TT 50.9 12 0.00041 30.2 3.5 74 63-137 12-95 (119)
312 2py6_A Methyltransferase FKBM; 44.1 21 0.00073 34.2 4.7 27 226-253 258-287 (409)
313 2nyu_A Putative ribosomal RNA 43.9 11 0.00036 31.1 2.2 12 214-225 20-31 (196)
314 1eg2_A Modification methylase 43.8 16 0.00053 34.1 3.5 36 286-321 56-105 (319)
315 3eld_A Methyltransferase; flav 42.1 24 0.00081 33.2 4.4 36 286-321 145-190 (300)
316 4hb7_A Dihydropteroate synthas 38.2 20 0.0007 33.1 3.3 40 186-225 12-51 (270)
317 1eye_A DHPS 1, dihydropteroate 37.1 28 0.00097 32.1 4.1 39 187-225 12-50 (280)
318 2vef_A Dihydropteroate synthas 36.0 24 0.00082 33.1 3.5 40 186-225 15-54 (314)
319 1i4w_A Mitochondrial replicati 33.9 1.1E+02 0.0036 29.1 7.7 28 226-260 88-115 (353)
320 3dmg_A Probable ribosomal RNA 29.2 44 0.0015 31.8 4.1 37 286-322 99-139 (381)
321 3dfe_A Putative PII-like signa 29.0 41 0.0014 26.7 3.3 32 74-105 7-38 (111)
322 3r24_A NSP16, 2'-O-methyl tran 28.9 34 0.0012 32.6 3.2 36 286-321 167-216 (344)
323 2y5s_A DHPS, dihydropteroate s 28.4 26 0.0009 32.6 2.3 40 186-225 28-67 (294)
324 2o66_A PII protein; regulation 28.4 70 0.0024 26.2 4.7 41 62-104 4-44 (135)
325 3two_A Mannitol dehydrogenase; 28.2 56 0.0019 29.9 4.6 35 288-325 234-268 (348)
326 1nh8_A ATP phosphoribosyltrans 28.1 69 0.0024 30.1 5.1 34 72-105 266-299 (304)
327 1pqw_A Polyketide synthase; ro 25.9 43 0.0015 27.8 3.0 34 287-324 106-139 (198)
328 3ce8_A Putative PII-like nitro 25.7 63 0.0022 26.1 3.9 35 71-105 21-56 (120)
329 1aj0_A DHPS, dihydropteroate s 25.0 50 0.0017 30.4 3.5 39 187-225 21-59 (282)
330 3k13_A 5-methyltetrahydrofolat 24.4 40 0.0014 31.5 2.7 16 186-201 174-190 (300)
331 2dqw_A Dihydropteroate synthas 24.0 22 0.00076 33.1 0.9 40 186-225 34-73 (294)
332 3mhy_A PII-like protein PZ; PI 23.3 87 0.003 24.5 4.2 31 74-104 2-32 (112)
333 1tx2_A DHPS, dihydropteroate s 23.2 54 0.0018 30.5 3.4 39 187-225 46-84 (297)
334 2ns1_B Nitrogen regulatory pro 23.0 85 0.0029 24.6 4.1 32 73-104 5-36 (116)
335 2j9c_A GLNK1, hypothetical nit 22.6 1E+02 0.0034 24.3 4.5 31 74-104 4-34 (119)
336 2vd3_A ATP phosphoribosyltrans 22.2 1E+02 0.0036 28.6 5.1 34 72-105 251-284 (289)
337 2vp8_A Dihydropteroate synthas 22.2 35 0.0012 32.2 1.9 39 187-225 48-86 (318)
338 2lic_A Vitellogenin; lipid tra 22.2 26 0.0009 21.8 0.7 9 47-55 15-23 (35)
339 1aj0_A DHPS, dihydropteroate s 21.4 48 0.0017 30.5 2.7 24 186-213 181-204 (282)
340 1f6y_A 5-methyltetrahydrofolat 20.8 94 0.0032 28.1 4.4 27 186-213 156-183 (262)
341 2eg2_A Nitrogen regulatory pro 20.8 94 0.0032 24.1 3.9 30 75-104 3-32 (112)
342 2dqw_A Dihydropteroate synthas 20.5 72 0.0025 29.6 3.7 31 186-217 193-223 (294)
343 1vfj_A Nitrogen regulatory pro 20.5 90 0.0031 24.4 3.8 30 75-104 3-32 (116)
344 2yci_X 5-methyltetrahydrofolat 20.2 96 0.0033 28.2 4.4 27 186-213 165-192 (271)
345 1hwu_A PII protein; herbaspiri 20.1 99 0.0034 23.9 3.9 30 75-104 3-32 (112)
No 1
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=100.00 E-value=3.1e-38 Score=291.16 Aligned_cols=201 Identities=26% Similarity=0.397 Sum_probs=169.2
Q ss_pred EEEEEEeCCchHHHHHHHHHhcCCceEEEEcCCCCCCCCCCcEEEEEEcCCCCCHHHHHHhhhhhcCCCCCCcceeeecc
Q 041970 74 LLVRICCQKHALDMFSEAPLCFGASSTSVDEHDNDADENSDEIYIDSIFPECKDVDECILNTANSIGLKEIPRYEVKMGE 153 (327)
Q Consensus 74 ~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied~~~~~~~~~~~~~v~ayfp~~~~~~~~l~~~~~~~~l~~~~~~~~~~~e 153 (327)
++|+|.|+++++|+++++|.+.|+.|++++|. .|++||+++.+.. .++ .++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-----------~~~~~~~~~~~~~--------~~~-------~~~~~~ 55 (254)
T 2nxc_A 2 WVYRLKGTLEALDPILPGLFDGGARGLWEREG-----------EVWAFFPAPVDLP--------YEG-------VWEEVG 55 (254)
T ss_dssp EEEEEESCHHHHGGGHHHHHHTTCCEEEEETT-----------EEEEEESSCCCCS--------SCC-------EEEECC
T ss_pred EEEEEEcCHHHHHHHHHHHHhhCCCEEEEECC-----------eEEEEEcCCcchh--------hcC-------ceeecC
Confidence 68999999999999999999999999998752 7899999876543 111 566678
Q ss_pred chhhHHHHhhcCceEEEcCcEEEEcCCCC---CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-----
Q 041970 154 QCNWIKKAQESFHPVEVTKGLWIVPEWNV---QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT----- 225 (327)
Q Consensus 154 e~DW~~~Wk~~f~P~~vg~~l~I~P~W~~---~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc----- 225 (327)
++||++.||++|+|+++|+ ++|+|+|+. +...+.|+||||||||+|+||++|+++|+++++++++|||+||
T Consensus 56 ~~dw~~~~~~~~~p~~~~~-~~i~~~w~~~~~~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l 134 (254)
T 2nxc_A 56 DEDWLEAWRRDLKPALAPP-FVVLAPWHTWEGAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVL 134 (254)
T ss_dssp HHHHHHHHHHHCCCEEETT-EEEECTTCCCCSSSEEEECCCC-----CCSHHHHHHHHHHHHHCCTTCEEEEETCTTSHH
T ss_pred hhHHHHHHHhhCCCEEEec-EEEeCCCCCCCCCceEEEECCCccccCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCcHH
Confidence 8899999999999999998 999999983 4577999999999999999999999999999889999999999
Q ss_pred -------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEE
Q 041970 226 -------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVV 292 (327)
Q Consensus 226 -------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlV 292 (327)
+|+||.+++.|++|++.|++. +++. .+|.. + .+ +.++||+|
T Consensus 135 ~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~---v~~~--~~d~~---------~-----------~~-~~~~fD~V 188 (254)
T 2nxc_A 135 AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR---PRFL--EGSLE---------A-----------AL-PFGPFDLL 188 (254)
T ss_dssp HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC---CEEE--ESCHH---------H-----------HG-GGCCEEEE
T ss_pred HHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc---EEEE--ECChh---------h-----------cC-cCCCCCEE
Confidence 999999999999999999975 4543 34431 1 01 14689999
Q ss_pred EEcCChHHHHHHHHHHhhccCCCcEEEEeeccCCC
Q 041970 293 IANILLNPLLQLADHIVSYAKPGAVVGISGILSEQ 327 (327)
Q Consensus 293 vANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~~Q 327 (327)
++|++.+.+..+++.+.++|+|||++++||++.+|
T Consensus 189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~~~ 223 (254)
T 2nxc_A 189 VANLYAELHAALAPRYREALVPGGRALLTGILKDR 223 (254)
T ss_dssp EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGGG
T ss_pred EECCcHHHHHHHHHHHHHHcCCCCEEEEEeeccCC
Confidence 99999999999999999999999999999998653
No 2
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.86 E-value=2.3e-21 Score=170.25 Aligned_cols=137 Identities=35% Similarity=0.508 Sum_probs=115.1
Q ss_pred hcCceEEEcCcEEEEcCCCC------CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-----------
Q 041970 163 ESFHPVEVTKGLWIVPEWNV------QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT----------- 225 (327)
Q Consensus 163 ~~f~P~~vg~~l~I~P~W~~------~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc----------- 225 (327)
++|+|+++|+.++++|.|.. +...+.++|+++||+|.|++++.+++++.++++++++|||+||
T Consensus 1 ~~~~~~~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~ 80 (205)
T 3grz_A 1 KYYHVINLSRHLAIVPEWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHK 80 (205)
T ss_dssp CCCCCEEEETTEEEEETTCCCCCSSTTCEEEEESCC-----CCHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHH
T ss_pred CCCCcEEECCcEEEeccccccccCCCCceeEEecCCcccCCCCCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHH
Confidence 58999999999999999982 2467899999999999999999999999999999999999999
Q ss_pred --------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC
Q 041970 226 --------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL 297 (327)
Q Consensus 226 --------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl 297 (327)
+|+++.+++.|++|++.+++. + +++. .+|.. .. ..++||+|++|..
T Consensus 81 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~-v~~~--~~d~~---------------------~~-~~~~fD~i~~~~~ 134 (205)
T 3grz_A 81 LGAKSVLATDISDESMTAAEENAALNGIY-D-IALQ--KTSLL---------------------AD-VDGKFDLIVANIL 134 (205)
T ss_dssp TTCSEEEEEESCHHHHHHHHHHHHHTTCC-C-CEEE--ESSTT---------------------TT-CCSCEEEEEEESC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHcCCC-c-eEEE--ecccc---------------------cc-CCCCceEEEECCc
Confidence 999999999999999999986 3 6654 35542 11 1478999999999
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 298 LNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 298 a~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
.+.+..++..+.+.|+|||+++++++..
T Consensus 135 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 135 AEILLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HHHHHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 9999999999999999999999998754
No 3
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=6e-13 Score=122.31 Aligned_cols=96 Identities=13% Similarity=0.168 Sum_probs=81.9
Q ss_pred HHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 207 LLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
|+++.+++++|.+|||+|| +|+|+.|++.|++|+++||+. +++++. .+|.+
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~-~~I~~~--~gD~l------ 82 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT-SKIDVR--LANGL------ 82 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEE--ECSGG------
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--ECchh------
Confidence 5788999999999999999 999999999999999999997 678875 46653
Q ss_pred cccchhhhcccccccCCCCCCCeeEE-EEcCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVV-IANILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlV-vANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
+ .+.+..+||+| +||+.++.+..++++....|+++|+||+||+..
T Consensus 83 --~------------~~~~~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~~ 128 (230)
T 3lec_A 83 --S------------AFEEADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPNNR 128 (230)
T ss_dssp --G------------GCCGGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred --h------------ccccccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECCCC
Confidence 1 12123379975 599999999999999999999999999999864
No 4
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.40 E-value=1.7e-12 Score=126.93 Aligned_cols=113 Identities=18% Similarity=0.231 Sum_probs=93.4
Q ss_pred eeEEEccCcccCCCchhhHHHHHHHHHhhhc----CCCeeeeeee------------------ecCCHHHHHHHHHHHHh
Q 041970 185 TNIILNPGLAFGTGEHATTKLCLLLLRSLIK----GGELFLDYGT------------------VDIDPQVIKSAHQNAAL 242 (327)
Q Consensus 185 ~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~----~g~~VLDvGc------------------VDIDp~AV~~A~eNa~l 242 (327)
..+..+||+.|+++.+++|+++++.+.+.+. ++.+|||+|| +|+|+.+++.|++|++.
T Consensus 198 ~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~ 277 (381)
T 3dmg_A 198 YTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEA 277 (381)
T ss_dssp EEEEECTTCTTTTSCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHH
T ss_pred EEEEeCCCceeCCCCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999999999999999988764 7889999999 99999999999999999
Q ss_pred cCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC--------hHHHHHHHHHHhhccCC
Q 041970 243 NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL--------LNPLLQLADHIVSYAKP 314 (327)
Q Consensus 243 Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl--------a~vL~~L~p~i~~~Lkp 314 (327)
|++. +++. .+|.. + .....++||+|++|.. .+....++..+.++|||
T Consensus 278 ~~~~---v~~~--~~D~~---------~-----------~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lkp 332 (381)
T 3dmg_A 278 NALK---AQAL--HSDVD---------E-----------ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRP 332 (381)
T ss_dssp TTCC---CEEE--ECSTT---------T-----------TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEE
T ss_pred cCCC---eEEE--Ecchh---------h-----------ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCc
Confidence 9975 4443 35542 0 0112468999999954 35567899999999999
Q ss_pred CcEEEEee
Q 041970 315 GAVVGISG 322 (327)
Q Consensus 315 GG~LIlSG 322 (327)
||+++++.
T Consensus 333 GG~l~iv~ 340 (381)
T 3dmg_A 333 GGVFFLVS 340 (381)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999974
No 5
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.37 E-value=1.4e-12 Score=120.84 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=81.3
Q ss_pred HHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 207 LLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
|+++.+++++|.+|||+|| +|+|+.|++.|++|+++||+. +++++. .+|.+
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-~~I~v~--~gD~l------ 82 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT-EQIDVR--KGNGL------ 82 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEE--ECSGG------
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEE--ecchh------
Confidence 6788999999999999999 999999999999999999997 678875 46653
Q ss_pred cccchhhhcccccccCCCCCCCeeEE-EEcCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVV-IANILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlV-vANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
+ .+.+..+||+| +||+..+.+..++++...+|+++|+||+|++..
T Consensus 83 --~------------~~~~~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 83 --A------------VIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNIA 128 (244)
T ss_dssp --G------------GCCGGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred --h------------ccCccccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 0 12112369975 599999999999999999999999999999753
No 6
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.35 E-value=2.2e-12 Score=118.12 Aligned_cols=95 Identities=17% Similarity=0.217 Sum_probs=80.2
Q ss_pred HHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 207 LLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
|+.+.+++++|.+|||+|| +|+++.|++.|++|++.||+. +++++. .+|.+
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-~~i~~~--~~d~l------ 76 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK-EKIQVR--LANGL------ 76 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEE--ECSGG------
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEE--ECchh------
Confidence 6789999999999999999 999999999999999999997 678875 46653
Q ss_pred cccchhhhcccccccCCCCCCCeeEE-EEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVV-IANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlV-vANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+ .+....+||+| +||+-...+..+++....+|+++|+||++++.
T Consensus 77 --~------------~l~~~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 77 --A------------AFEETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp --G------------GCCGGGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred --h------------hcccCcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 1 12112369955 58999889999999999999999999999984
No 7
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.25 E-value=8.9e-12 Score=121.38 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=90.4
Q ss_pred ceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhc
Q 041970 184 ATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 184 ~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lN 243 (327)
...+..+||+.+..+.++.|+++++++.. .++.+|||+|| +|+++.+++.|++|++.|
T Consensus 192 ~~~~~~~pg~Fs~~~~d~~~~~ll~~l~~--~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n 269 (375)
T 4dcm_A 192 DWTIHNHANVFSRTGLDIGARFFMQHLPE--NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 269 (375)
T ss_dssp TEEEEECTTCTTCSSCCHHHHHHHHTCCC--SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred ceEEEeCCCcccCCcccHHHHHHHHhCcc--cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc
Confidence 35688899999999999999999888763 35689999999 999999999999999999
Q ss_pred CCCC-CcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH--------HHHHHHHHHhhccCC
Q 041970 244 NIGP-KKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN--------PLLQLADHIVSYAKP 314 (327)
Q Consensus 244 gv~~-~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~--------vL~~L~p~i~~~Lkp 314 (327)
++.. .++++. .+|.. + .+ ..++||+|++|+..+ ....++..+.++|||
T Consensus 270 gl~~~~~v~~~--~~D~~--------~------------~~-~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp 326 (375)
T 4dcm_A 270 MPEALDRCEFM--INNAL--------S------------GV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 326 (375)
T ss_dssp CGGGGGGEEEE--ECSTT--------T------------TC-CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEE
T ss_pred CCCcCceEEEE--echhh--------c------------cC-CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC
Confidence 9762 135443 45552 0 11 256899999997643 345688999999999
Q ss_pred CcEEEEee
Q 041970 315 GAVVGISG 322 (327)
Q Consensus 315 GG~LIlSG 322 (327)
||++++++
T Consensus 327 gG~l~iv~ 334 (375)
T 4dcm_A 327 NGELYIVA 334 (375)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999975
No 8
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.25 E-value=4.9e-12 Score=113.76 Aligned_cols=98 Identities=21% Similarity=0.127 Sum_probs=77.8
Q ss_pred CchhhHHHHHHHHHhh-------hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcE
Q 041970 198 GEHATTKLCLLLLRSL-------IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKM 250 (327)
Q Consensus 198 G~H~TT~lcLe~Le~~-------~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v 250 (327)
..|++||+||..++++ +.+..+|||+|| +|||+.+++.|++|++.||+. .++
T Consensus 24 ~~H~STReRLp~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~-~~v 102 (200)
T 3fzg_A 24 KIHSSTNERVATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT-IKY 102 (200)
T ss_dssp HHSHHHHTTGGGHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS-SEE
T ss_pred hhCCCHHHHhHhHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ccE
Confidence 3699999999999987 456789999999 999999999999999999987 456
Q ss_pred EEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHH---HHHHHhhccCCCcEEEEe
Q 041970 251 KLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQ---LADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 251 ~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~---L~p~i~~~LkpGG~LIlS 321 (327)
++. |.. .. .+.++||+|+++-+.+.+.+ .+-.+.+.|+|||.+|.-
T Consensus 103 ~~~----d~~--------~~-------------~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 103 RFL----NKE--------SD-------------VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp EEE----CCH--------HH-------------HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred EEe----ccc--------cc-------------CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 652 221 10 13678999999988777743 233899999999988753
No 9
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.21 E-value=3.6e-11 Score=104.12 Aligned_cols=104 Identities=18% Similarity=0.193 Sum_probs=76.9
Q ss_pred CCchhhHHHHHHHHHhhh-----cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEE
Q 041970 197 TGEHATTKLCLLLLRSLI-----KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKL 252 (327)
Q Consensus 197 TG~H~TT~lcLe~Le~~~-----~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v 252 (327)
.|.+||+....+.+-+.+ .+|++|||+|| +|+|+.+++.|++|++.|++. ++++
T Consensus 20 ~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~ 97 (189)
T 3p9n_A 20 RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS--GATL 97 (189)
T ss_dssp CCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCS--CEEE
T ss_pred CCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCC--ceEE
Confidence 467888888877776655 57889999999 999999999999999999983 5666
Q ss_pred EecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH----HHHHHHHHHhh--ccCCCcEEEEee
Q 041970 253 HLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN----PLLQLADHIVS--YAKPGAVVGISG 322 (327)
Q Consensus 253 ~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~----vL~~L~p~i~~--~LkpGG~LIlSG 322 (327)
. .+|.. +... .. ..++||+|++|.... .+..++..+.+ +|+|||++++.-
T Consensus 98 ~--~~d~~---------~~~~--------~~-~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 98 R--RGAVA---------AVVA--------AG-TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp E--ESCHH---------HHHH--------HC-CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred E--EccHH---------HHHh--------hc-cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 4 45541 1110 01 146899999997643 46778888888 999999999863
No 10
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=5.8e-11 Score=124.46 Aligned_cols=118 Identities=17% Similarity=0.257 Sum_probs=97.0
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN 243 (327)
+.+.+.+|++..+.||.+...+.+.+++.++. +|++|||+|| ||+++.|++.|++|+++|
T Consensus 507 ~g~~~~v~~~~~~~tG~f~d~r~~r~~l~~~~-~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~n 585 (703)
T 3v97_A 507 YNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS-KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN 585 (703)
T ss_dssp TTEEEEECSSSSSSCSCCGGGHHHHHHHHHHC-TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEeccccccCCCcccHHHHHHHHHHhc-CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 45678899999999999999999999998865 6899999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--------------HHHHHHHHHHh
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--------------NPLLQLADHIV 309 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--------------~vL~~L~p~i~ 309 (327)
|+..+++++. .+|++ +.+. . ..++||+|++|+.. ..+..++..+.
T Consensus 586 gl~~~~v~~i--~~D~~---------~~l~--------~--~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~ 644 (703)
T 3v97_A 586 GLTGRAHRLI--QADCL---------AWLR--------E--ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 644 (703)
T ss_dssp TCCSTTEEEE--ESCHH---------HHHH--------H--CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHH
T ss_pred CCCccceEEE--ecCHH---------HHHH--------h--cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHH
Confidence 9974567764 46642 1111 0 14689999999863 34667888999
Q ss_pred hccCCCcEEEEee
Q 041970 310 SYAKPGAVVGISG 322 (327)
Q Consensus 310 ~~LkpGG~LIlSG 322 (327)
++|+|||+|++|-
T Consensus 645 ~~LkpgG~L~~s~ 657 (703)
T 3v97_A 645 RLLRAGGTIMFSN 657 (703)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEE
Confidence 9999999999875
No 11
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.19 E-value=6.3e-11 Score=113.59 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=93.6
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhc---CCCeeeeeee------------------ecCCHHHHHHHHHHHH
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIK---GGELFLDYGT------------------VDIDPQVIKSAHQNAA 241 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~---~g~~VLDvGc------------------VDIDp~AV~~A~eNa~ 241 (327)
+...+.++|...|-||..+.++...+++.+++. ++++|||+|| ||+++.|++.|++|++
T Consensus 117 ~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~ 196 (332)
T 2igt_A 117 LGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQV 196 (332)
T ss_dssp TTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH
Confidence 456788999999999999999999888888874 5779999999 9999999999999999
Q ss_pred hcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------HHHHHHHHHH
Q 041970 242 LNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------NPLLQLADHI 308 (327)
Q Consensus 242 lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------~vL~~L~p~i 308 (327)
+|++...++++. .+|+. +.... .....++||+|++|+.. ..+..++..+
T Consensus 197 ~~gl~~~~v~~i--~~D~~---------~~l~~-------~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~ 258 (332)
T 2igt_A 197 LAGLEQAPIRWI--CEDAM---------KFIQR-------EERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDIC 258 (332)
T ss_dssp HHTCTTSCEEEE--CSCHH---------HHHHH-------HHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHH
T ss_pred HcCCCccceEEE--ECcHH---------HHHHH-------HHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHH
Confidence 999863247764 45642 11100 00013589999999862 2456788889
Q ss_pred hhccCCCcEEEEe
Q 041970 309 VSYAKPGAVVGIS 321 (327)
Q Consensus 309 ~~~LkpGG~LIlS 321 (327)
.++|+|||+++++
T Consensus 259 ~~~LkpgG~lli~ 271 (332)
T 2igt_A 259 REILSPKALGLVL 271 (332)
T ss_dssp HHTBCTTCCEEEE
T ss_pred HHhcCcCcEEEEE
Confidence 9999999997664
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.19 E-value=5.9e-11 Score=109.89 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=82.1
Q ss_pred CchhhHHHHHHHHHhhhcCCCeeeeeee----------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEec
Q 041970 198 GEHATTKLCLLLLRSLIKGGELFLDYGT----------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLV 255 (327)
Q Consensus 198 G~H~TT~lcLe~Le~~~~~g~~VLDvGc----------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~ 255 (327)
|.+...+++..++++++++|.+|||+|| ||+++.+++.|++|++..+.. .++++.
T Consensus 52 ~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~-~~v~~~-- 128 (261)
T 4gek_A 52 GYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP-TPVDVI-- 128 (261)
T ss_dssp THHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS-SCEEEE--
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC-ceEEEe--
Confidence 4677788888899999999999999999 899999999999999988876 567764
Q ss_pred CCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH-----HHHHHHHHhhccCCCcEEEEeecc
Q 041970 256 PDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP-----LLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 256 ~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v-----L~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.+|.. .+ +.++||+|++|...+. ...++..+.+.|||||+|+++-..
T Consensus 129 ~~D~~---------------------~~-~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 129 EGDIR---------------------DI-AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ESCTT---------------------TC-CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ecccc---------------------cc-cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 45642 12 1457999999965432 346889999999999999998543
No 13
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.18 E-value=4.6e-11 Score=112.18 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=78.1
Q ss_pred CchhhHHHHHHHHHhhhc-------CCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcE
Q 041970 198 GEHATTKLCLLLLRSLIK-------GGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKM 250 (327)
Q Consensus 198 G~H~TT~lcLe~Le~~~~-------~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v 250 (327)
|.|++|++||..|+.+.. +..+|||+|| +|||+.+++.+++|++.||+. .++
T Consensus 107 ~~H~STreRLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~ 185 (281)
T 3lcv_B 107 SVHISTRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-HRT 185 (281)
T ss_dssp TTSHHHHHHGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEE
T ss_pred hcCCCHHHHhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceE
Confidence 689999999999997742 3579999999 999999999999999999986 334
Q ss_pred EEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHH-----HHHHHhhccCCCcEEEEe
Q 041970 251 KLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQ-----LADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 251 ~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~-----L~p~i~~~LkpGG~LIlS 321 (327)
.+ .|.. .-.+.++||+|++|++.+.|.+ ++ .+...|+|||.+|--
T Consensus 186 ~v----~D~~---------------------~~~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 186 NV----ADLL---------------------EDRLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp EE----CCTT---------------------TSCCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred EE----eeec---------------------ccCCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 32 4432 0113678999999999999864 45 789999999988753
No 14
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=7.5e-11 Score=115.75 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=93.7
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcC
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNN 244 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNg 244 (327)
+...+.+|+...+.||.+...+..-+++.++.++|++|||+|| +|+++.|++.|++|+++|+
T Consensus 181 ~g~~f~vd~~~~~~tG~f~dqr~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng 260 (393)
T 4dmg_A 181 DGLRFPIPLALAQKTGYYLDQRENRRLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLG 260 (393)
T ss_dssp TTEEEEEETTTCCTTSSCGGGHHHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEechhccccCcCCCHHHHHHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhC
Confidence 4567889999999999999999999999998888999999999 9999999999999999999
Q ss_pred CCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------------HHHHHHHHHHhhcc
Q 041970 245 IGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------NPLLQLADHIVSYA 312 (327)
Q Consensus 245 v~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------~vL~~L~p~i~~~L 312 (327)
+. .++. .+|+. +.+. .. .++||+|++|+.. ..+..++..+.++|
T Consensus 261 ~~-~~~~----~~D~~---------~~l~--------~~--~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~L 316 (393)
T 4dmg_A 261 LR-VDIR----HGEAL---------PTLR--------GL--EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLL 316 (393)
T ss_dssp CC-CEEE----ESCHH---------HHHH--------TC--CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTE
T ss_pred CC-CcEE----EccHH---------HHHH--------Hh--cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 97 3433 35542 1111 11 2349999999875 45567888899999
Q ss_pred CCCcEEEEe
Q 041970 313 KPGAVVGIS 321 (327)
Q Consensus 313 kpGG~LIlS 321 (327)
+|||+|+++
T Consensus 317 kpGG~Lv~~ 325 (393)
T 4dmg_A 317 AEEGFLWLS 325 (393)
T ss_dssp EEEEEEEEE
T ss_pred CCCCEEEEE
Confidence 999999854
No 15
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.15 E-value=1.4e-10 Score=99.47 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=77.9
Q ss_pred hhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 200 HATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 200 H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
...+.++.+++...+++|++|||+|| +|+++.+++.|++|++.+++. ++++.. ++.
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~--~~~-- 79 (185)
T 3mti_A 6 KRPIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIE--NTELIL--DGH-- 79 (185)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCC--CEEEEE--SCG--
T ss_pred HhHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEe--CcH--
Confidence 45578888899988899999999999 999999999999999999983 577642 332
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcC------------ChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANI------------LLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANI------------la~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
..+. .. ..++||+|++|+ ..+....++..+.++|||||++++...
T Consensus 80 -------~~l~---------~~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 80 -------ENLD---------HY-VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp -------GGGG---------GT-CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -------HHHH---------hh-ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1110 11 256899999995 224445677899999999999988643
No 16
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.13 E-value=1.5e-10 Score=98.52 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=72.1
Q ss_pred CCCchhhHHHHHHHHHhhhc---CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEE
Q 041970 196 GTGEHATTKLCLLLLRSLIK---GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLH 253 (327)
Q Consensus 196 GTG~H~TT~lcLe~Le~~~~---~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~ 253 (327)
|.+..||+....+.+.+.+. ++++|||+|| +|+++.+++.|++|++.+++. +++++.
T Consensus 8 ~~~~rp~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~ 86 (177)
T 2esr_A 8 GKITRPTSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE-NRFTLL 86 (177)
T ss_dssp ----------CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG-GGEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEE
Confidence 55778999988888777654 6789999999 999999999999999999986 467764
Q ss_pred ecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--HHHHHHHHHHh--hccCCCcEEEEeec
Q 041970 254 LVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--NPLLQLADHIV--SYAKPGAVVGISGI 323 (327)
Q Consensus 254 ~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--~vL~~L~p~i~--~~LkpGG~LIlSGI 323 (327)
.+|.. +... .. .++||+|++|... .....++..+. +.|+|||+++++-.
T Consensus 87 --~~d~~---------~~~~--------~~--~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 87 --KMEAE---------RAID--------CL--TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp --CSCHH---------HHHH--------HB--CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred --ECcHH---------HhHH--------hh--cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 45541 1110 11 3579999999764 44455666666 89999999998753
No 17
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.12 E-value=1e-10 Score=103.15 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=74.6
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhh---cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLI---KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~---~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN 243 (327)
.+...+| .+.+||+....+.+.+.+ .++.+|||+|| +|+|+.+++.|++|++.|
T Consensus 24 ~l~~~~~----~~~rp~~~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 99 (201)
T 2ift_A 24 KLPVLNS----EGLRPTGDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL 99 (201)
T ss_dssp EEECC-------------CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred EecCCCC----CCcCcCHHHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh
Confidence 4444443 467888888777665544 26889999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCC-eeEEEEcCC--hHHHHHHHHHH--hhccCCCcEE
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEE-YDVVIANIL--LNPLLQLADHI--VSYAKPGAVV 318 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~-fDlVvANIl--a~vL~~L~p~i--~~~LkpGG~L 318 (327)
++..+++++. .+|.. +.. ... ..++ ||+|++|.. ......++..+ .++|+|||++
T Consensus 100 ~~~~~~v~~~--~~d~~---------~~~--------~~~-~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l 159 (201)
T 2ift_A 100 KCSSEQAEVI--NQSSL---------DFL--------KQP-QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALI 159 (201)
T ss_dssp TCCTTTEEEE--CSCHH---------HHT--------TSC-CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCccceEEE--ECCHH---------HHH--------Hhh-ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEE
Confidence 9832357764 45531 111 011 1467 999999987 34455666677 5679999999
Q ss_pred EEeec
Q 041970 319 GISGI 323 (327)
Q Consensus 319 IlSGI 323 (327)
+++-.
T Consensus 160 ~i~~~ 164 (201)
T 2ift_A 160 YVETE 164 (201)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98754
No 18
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.12 E-value=1.4e-10 Score=112.84 Aligned_cols=120 Identities=16% Similarity=0.189 Sum_probs=95.8
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN 243 (327)
+...+.++|...+.||.....+.+.+++.++ .+|++|||+|| +|+++.|++.|++|+++|
T Consensus 188 ~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n 266 (396)
T 3c0k_A 188 HGMKLLVDIQHGHKTGYYLDQRDSRLATRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN 266 (396)
T ss_dssp TTEEEEECTTTSSTTSSCGGGHHHHHHHHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEeccccccCCcCcCHHHHHHHHHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 3467889999999999999999998888887 67899999999 999999999999999999
Q ss_pred CC-CCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------------HHHHHHHHHHhh
Q 041970 244 NI-GPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------NPLLQLADHIVS 310 (327)
Q Consensus 244 gv-~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------~vL~~L~p~i~~ 310 (327)
++ . +++++. .+|.. +.... .....++||+|++|+.. ..+..++..+.+
T Consensus 267 gl~~-~~v~~~--~~D~~---------~~~~~-------~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~ 327 (396)
T 3c0k_A 267 KLDL-SKAEFV--RDDVF---------KLLRT-------YRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQ 327 (396)
T ss_dssp TCCG-GGEEEE--ESCHH---------HHHHH-------HHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHH
T ss_pred CCCc-cceEEE--ECCHH---------HHHHH-------HHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHH
Confidence 98 5 357764 45542 11100 00013589999999875 667788899999
Q ss_pred ccCCCcEEEEee
Q 041970 311 YAKPGAVVGISG 322 (327)
Q Consensus 311 ~LkpGG~LIlSG 322 (327)
.|+|||++++|-
T Consensus 328 ~LkpgG~l~~~~ 339 (396)
T 3c0k_A 328 LLNEGGILLTFS 339 (396)
T ss_dssp TEEEEEEEEEEE
T ss_pred hcCCCcEEEEEe
Confidence 999999999864
No 19
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.10 E-value=1.2e-10 Score=113.21 Aligned_cols=120 Identities=22% Similarity=0.288 Sum_probs=94.2
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN 243 (327)
+...+.++| .+|.||.+..++.+.+++.++.++|++|||+|| +|+++.|++.|++|+++|
T Consensus 185 ~g~~~~~~~-~~~~tg~f~~~~~~~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n 263 (396)
T 2as0_A 185 GRAKFIVDM-RGQKTGFFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLN 263 (396)
T ss_dssp TTEEEEEES-SSSSSCCCSTTHHHHHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEec-cccccCccCCHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 346688999 889999999998988888887668899999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------------HHHHHHHHHHhhc
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------NPLLQLADHIVSY 311 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------~vL~~L~p~i~~~ 311 (327)
++. +++++. .+|+. +.... .....++||+|++|+.. ..+..++..+.+.
T Consensus 264 ~~~-~~v~~~--~~d~~---------~~~~~-------~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (396)
T 2as0_A 264 GVE-DRMKFI--VGSAF---------EEMEK-------LQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNL 324 (396)
T ss_dssp TCG-GGEEEE--ESCHH---------HHHHH-------HHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTT
T ss_pred CCC-ccceEE--ECCHH---------HHHHH-------HHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 986 367764 35541 11100 00014689999999865 4567788899999
Q ss_pred cCCCcEEEEee
Q 041970 312 AKPGAVVGISG 322 (327)
Q Consensus 312 LkpGG~LIlSG 322 (327)
|+|||+++++-
T Consensus 325 LkpgG~lv~~~ 335 (396)
T 2as0_A 325 VKDGGILVTCS 335 (396)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 99999988873
No 20
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.09 E-value=3.3e-10 Score=105.19 Aligned_cols=112 Identities=16% Similarity=0.159 Sum_probs=83.7
Q ss_pred ceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcC
Q 041970 184 ATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNN 244 (327)
Q Consensus 184 ~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNg 244 (327)
.....+|+.- ++.++..+.-.+.+.+++++|++|||+|| +|+++.|++.|++|+++|+
T Consensus 96 g~~f~~d~~~---~~f~~~~~~~~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~ 172 (278)
T 2frn_A 96 GIKYKLDVAK---IMFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNK 172 (278)
T ss_dssp TEEEEEETTT---SCCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEEccc---eeEcCCcHHHHHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 4566777643 44555544445566666788999999999 9999999999999999999
Q ss_pred CCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 245 IGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 245 v~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+. +++++. .+|.. + ....++||+|++|..... ..+++.+.+.|+|||++++...
T Consensus 173 ~~-~~v~~~--~~D~~---------~------------~~~~~~fD~Vi~~~p~~~-~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 173 VE-DRMSAY--NMDNR---------D------------FPGENIADRILMGYVVRT-HEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp CT-TTEEEE--CSCTT---------T------------CCCCSCEEEEEECCCSSG-GGGHHHHHHHEEEEEEEEEEEE
T ss_pred CC-ceEEEE--ECCHH---------H------------hcccCCccEEEECCchhH-HHHHHHHHHHCCCCeEEEEEEe
Confidence 97 567764 46652 1 112568999999987543 4567788899999999998543
No 21
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.09 E-value=5.9e-10 Score=103.43 Aligned_cols=86 Identities=8% Similarity=0.054 Sum_probs=70.7
Q ss_pred hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 214 IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 214 ~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
+++|++|||+|| +|+++.+++.|++|++.+++. +++++. .+|..
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~-------------- 132 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP-RRKEVR--IQGWE-------------- 132 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCS-SCEEEE--ECCGG--------------
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCC-CceEEE--ECCHH--------------
Confidence 367889999999 999999999999999999986 567765 34431
Q ss_pred cccccccCCCCCCCeeEEEEcCChHHH------------HHHHHHHhhccCCCcEEEEeeccC
Q 041970 275 LSSHKIRGISETEEYDVVIANILLNPL------------LQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~vL------------~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
.+ .++||+|++|-..+.+ ..++..+.++|||||++++..+..
T Consensus 133 -------~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 133 -------EF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp -------GC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred -------Hc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 12 5789999999765444 788999999999999999988753
No 22
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.07 E-value=1.9e-10 Score=111.54 Aligned_cols=118 Identities=19% Similarity=0.289 Sum_probs=93.7
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcC
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNN 244 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNg 244 (327)
+...+.++|...+.||.+...+.+.+++.++ +|++|||+|| +|+++.+++.|++|+++|+
T Consensus 178 ~g~~f~i~~~~~~~~g~f~~~~~~~~~~~~~--~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~ 255 (382)
T 1wxx_A 178 GRVRYLVDLRAGQKTGAYLDQRENRLYMERF--RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNG 255 (382)
T ss_dssp TTEEEEEECSTTSCCCCCGGGHHHHHHGGGC--CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEchhcccCccccchHHHHHHHHhc--CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 3466889999999999999998888888877 7889999999 9999999999999999999
Q ss_pred CCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------------HHHHHHHHHHhhcc
Q 041970 245 IGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------NPLLQLADHIVSYA 312 (327)
Q Consensus 245 v~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------~vL~~L~p~i~~~L 312 (327)
+. + +++. .+|.. +.... .....++||+|++|+.. ..+..++..+.+.|
T Consensus 256 ~~-~-~~~~--~~d~~---------~~~~~-------~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L 315 (382)
T 1wxx_A 256 LG-N-VRVL--EANAF---------DLLRR-------LEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLL 315 (382)
T ss_dssp CT-T-EEEE--ESCHH---------HHHHH-------HHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTE
T ss_pred CC-C-ceEE--ECCHH---------HHHHH-------HHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhc
Confidence 86 3 6664 45541 11100 00014689999999865 55677888999999
Q ss_pred CCCcEEEEee
Q 041970 313 KPGAVVGISG 322 (327)
Q Consensus 313 kpGG~LIlSG 322 (327)
+|||+|+++-
T Consensus 316 kpgG~l~~~~ 325 (382)
T 1wxx_A 316 KEGGILATAS 325 (382)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999999874
No 23
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.06 E-value=4.3e-10 Score=105.83 Aligned_cols=113 Identities=17% Similarity=0.237 Sum_probs=84.8
Q ss_pred CceeEEEccCcc-cCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHh
Q 041970 183 QATNIILNPGLA-FGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAAL 242 (327)
Q Consensus 183 ~~~~I~idPG~A-FGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~l 242 (327)
....+.+|+.-. |-.|.. |-+ +.+.+++++|++|||+|| +|++|.|++.+++|+++
T Consensus 95 ~G~~~~~D~~k~~f~~~~~-~er---~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~ 170 (278)
T 3k6r_A 95 NGIKYKLDVAKIMFSPANV-KER---VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL 170 (278)
T ss_dssp TTEEEEEETTTSCCCGGGH-HHH---HHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeccceEEcCCcH-HHH---HHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHH
Confidence 456788888643 444443 333 345566789999999999 99999999999999999
Q ss_pred cCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 243 NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 243 Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
|++. +++++. .+|.. .+...+.||.|++|++.... .+++.+.++||+||++.+-+
T Consensus 171 N~v~-~~v~~~--~~D~~---------------------~~~~~~~~D~Vi~~~p~~~~-~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 171 NKVE-DRMSAY--NMDNR---------------------DFPGENIADRILMGYVVRTH-EFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp TTCT-TTEEEE--CSCTT---------------------TCCCCSCEEEEEECCCSSGG-GGHHHHHHHEEEEEEEEEEE
T ss_pred cCCC-CcEEEE--eCcHH---------------------HhccccCCCEEEECCCCcHH-HHHHHHHHHcCCCCEEEEEe
Confidence 9998 678875 56642 12235789999999875443 45677788999999998766
Q ss_pred cc
Q 041970 323 IL 324 (327)
Q Consensus 323 Il 324 (327)
+.
T Consensus 226 ~~ 227 (278)
T 3k6r_A 226 TV 227 (278)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 24
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.05 E-value=4.1e-10 Score=104.57 Aligned_cols=97 Identities=19% Similarity=0.093 Sum_probs=76.0
Q ss_pred CchhhHHHHHHHHHhhh------cCCCeeeeeee-----------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEe
Q 041970 198 GEHATTKLCLLLLRSLI------KGGELFLDYGT-----------------VDIDPQVIKSAHQNAALNNIGPKKMKLHL 254 (327)
Q Consensus 198 G~H~TT~lcLe~Le~~~------~~g~~VLDvGc-----------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~ 254 (327)
..|++|++||..|+.+. .+..+|||+|| +|||+.+++.+++|+.+||.. .++.
T Consensus 81 ~~H~STrerLp~ld~fY~~i~~~~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~---~~~~- 156 (253)
T 3frh_A 81 SLHASTKERLAELDTLYDFIFSAETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWD---FTFA- 156 (253)
T ss_dssp TTSHHHHHHGGGHHHHHHHHTSSCCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCE---EEEE-
T ss_pred hhCCCHHHHhhhHHHHHHHHhcCCCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCC---ceEE-
Confidence 47999999999999874 35679999999 999999999999999999964 3433
Q ss_pred cCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHH----HHHHhhccCCCcEEEE
Q 041970 255 VPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQL----ADHIVSYAKPGAVVGI 320 (327)
Q Consensus 255 ~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L----~p~i~~~LkpGG~LIl 320 (327)
..|.. .....++||+|++|.+.+.|... .-.+...|+++|.+|-
T Consensus 157 -v~D~~---------------------~~~~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 157 -LQDVL---------------------CAPPAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp -ECCTT---------------------TSCCCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred -Eeecc---------------------cCCCCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 24542 01135689999999999998642 2267789999987764
No 25
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.04 E-value=2.2e-10 Score=97.66 Aligned_cols=107 Identities=15% Similarity=0.167 Sum_probs=76.8
Q ss_pred CCchhhHHHHHHHHHhhhc---CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEe
Q 041970 197 TGEHATTKLCLLLLRSLIK---GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHL 254 (327)
Q Consensus 197 TG~H~TT~lcLe~Le~~~~---~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~ 254 (327)
...+||+....+.+.+.+. ++++|||+|| +|+++.+++.|++|++.|++. +++++.
T Consensus 22 ~~~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~- 99 (187)
T 2fhp_A 22 DNTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP-EKFEVR- 99 (187)
T ss_dssp CSSCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEE-
T ss_pred CCcCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC-cceEEE-
Confidence 3667888888887776653 6789999999 999999999999999999985 467764
Q ss_pred cCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--HHHHHHHHHH--hhccCCCcEEEEee
Q 041970 255 VPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--NPLLQLADHI--VSYAKPGAVVGISG 322 (327)
Q Consensus 255 ~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--~vL~~L~p~i--~~~LkpGG~LIlSG 322 (327)
.+|.. +.... . .. ..++||+|++|... ......+..+ .++|+|||+++++-
T Consensus 100 -~~d~~---------~~~~~-----~-~~-~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 100 -KMDAN---------RALEQ-----F-YE-EKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp -ESCHH---------HHHHH-----H-HH-TTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -ECcHH---------HHHHH-----H-Hh-cCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 35541 11100 0 00 14689999999763 2234445555 78899999998864
No 26
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.04 E-value=5.7e-10 Score=98.39 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=71.5
Q ss_pred CCchhhHHHHHHHHHhhhc---CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEe
Q 041970 197 TGEHATTKLCLLLLRSLIK---GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHL 254 (327)
Q Consensus 197 TG~H~TT~lcLe~Le~~~~---~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~ 254 (327)
.+.+||+....+.+.+.+. ++.+|||+|| +|+++.+++.|++|++.|++. ++++.
T Consensus 32 ~~~rp~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~--~v~~~- 108 (202)
T 2fpo_A 32 PGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAG--NARVV- 108 (202)
T ss_dssp ------CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC--SEEEE-
T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCC--cEEEE-
Confidence 4678888877776665542 6889999999 999999999999999999983 57664
Q ss_pred cCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC--hHHHHHHHHHHhh--ccCCCcEEEEeec
Q 041970 255 VPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL--LNPLLQLADHIVS--YAKPGAVVGISGI 323 (327)
Q Consensus 255 ~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl--a~vL~~L~p~i~~--~LkpGG~LIlSGI 323 (327)
.+|.. +.. .. ..++||+|++|.. ......++..+.+ +|+|||+++++-.
T Consensus 109 -~~D~~---------~~~---------~~-~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 109 -NSNAM---------SFL---------AQ-KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp -CSCHH---------HHH---------SS-CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -ECCHH---------HHH---------hh-cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 45541 111 11 2468999999976 2334455566654 5999999998754
No 27
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.04 E-value=1.6e-09 Score=91.98 Aligned_cols=100 Identities=19% Similarity=0.255 Sum_probs=76.9
Q ss_pred chhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041970 199 EHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTF 260 (327)
Q Consensus 199 ~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~ 260 (327)
..+.++..++.+. .+++.+|||+|| +|+++.+++.|++|++.+++...++++. .+|..
T Consensus 37 ~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~--~~d~~ 112 (194)
T 1dus_A 37 VDKGTKILVENVV--VDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVV--HSDLY 112 (194)
T ss_dssp CCHHHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE--ECSTT
T ss_pred cchHHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEE--ECchh
Confidence 3467777777764 347889999999 9999999999999999999863257764 35542
Q ss_pred CCCccccccchhhhcccccccCCCCCCCeeEEEEcCC----hHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 261 PSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL----LNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 261 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl----a~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+ .. ..++||+|++|.. ...+..++..+.++|+|||+++++..
T Consensus 113 ---------~-----------~~-~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 113 ---------E-----------NV-KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp ---------T-----------TC-TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------c-----------cc-ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 0 11 2468999999986 34567888999999999999998754
No 28
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.03 E-value=6.6e-10 Score=108.23 Aligned_cols=123 Identities=13% Similarity=0.068 Sum_probs=93.7
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN 243 (327)
....+.++|+..+.||....++..-.++.+++.+|++|||+|| +|+++.|++.|++|+++|
T Consensus 179 ~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n 258 (385)
T 2b78_A 179 NGISYNVFLNDGLMTGIFLDQRQVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEAN 258 (385)
T ss_dssp TTEEEEECSSSSSCCSSCGGGHHHHHHHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHT
T ss_pred CCEEEEEeccccccCCcCCcHHHHHHHHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 4577899999888899888888888888877567899999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------------HHHHHHHHHHhhc
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------NPLLQLADHIVSY 311 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------~vL~~L~p~i~~~ 311 (327)
++...++++. .+|+. +.+.. ......+||+|++|+.. ..+..++..+.+.
T Consensus 259 ~~~~~~v~~~--~~D~~---------~~l~~-------~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~ 320 (385)
T 2b78_A 259 HLDMANHQLV--VMDVF---------DYFKY-------ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEI 320 (385)
T ss_dssp TCCCTTEEEE--ESCHH---------HHHHH-------HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHT
T ss_pred CCCccceEEE--ECCHH---------HHHHH-------HHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHh
Confidence 9963267764 45642 11100 00013589999999764 2345577788999
Q ss_pred cCCCcEEEEeec
Q 041970 312 AKPGAVVGISGI 323 (327)
Q Consensus 312 LkpGG~LIlSGI 323 (327)
|+|||+++++--
T Consensus 321 L~pgG~l~~~~~ 332 (385)
T 2b78_A 321 LSENGLIIASTN 332 (385)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCcEEEEEeC
Confidence 999999998853
No 29
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.01 E-value=1.3e-09 Score=96.57 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=77.0
Q ss_pred cccCCCchhhHHHHHHH-HHhh--hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEE
Q 041970 193 LAFGTGEHATTKLCLLL-LRSL--IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMK 251 (327)
Q Consensus 193 ~AFGTG~H~TT~lcLe~-Le~~--~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~ 251 (327)
-.| ...++.|...+.. +.+. +.++++|||+|| +|+++.+++.|++|++.+++. ++++
T Consensus 30 ~~f-~~~~~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~ 107 (204)
T 3njr_A 30 SAF-AHDGQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLS-PRMR 107 (204)
T ss_dssp GGS-CCSSCCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCT-TTEE
T ss_pred HHh-hcCCCCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEE
Confidence 457 5555666544432 2222 357889999999 999999999999999999986 4677
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+. .+|.. +. +....+||+|++|...+ .. ++..+.+.|||||+++++.+.
T Consensus 108 ~~--~~d~~---------~~-----------~~~~~~~D~v~~~~~~~-~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 108 AV--QGTAP---------AA-----------LADLPLPEAVFIGGGGS-QA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp EE--ESCTT---------GG-----------GTTSCCCSEEEECSCCC-HH-HHHHHHHHSCTTCEEEEEECS
T ss_pred EE--eCchh---------hh-----------cccCCCCCEEEECCccc-HH-HHHHHHHhcCCCcEEEEEecC
Confidence 64 45542 11 11135799999997443 33 889999999999999998864
No 30
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.01 E-value=5.9e-10 Score=101.68 Aligned_cols=85 Identities=19% Similarity=0.184 Sum_probs=66.9
Q ss_pred CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 216 GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 216 ~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
++++|||+|| +|+++.+++.|++|++.|++. +++++. .+|.. +..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~~v~~~--~~D~~---------~~~---- 112 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLE-DQIEII--EYDLK---------KIT---- 112 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCT-TTEEEE--CSCGG---------GGG----
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCc-ccEEEE--ECcHH---------Hhh----
Confidence 6889999999 999999999999999999997 578774 46642 111
Q ss_pred cccccCCCCCCCeeEEEEcCCh-----------------------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 277 SHKIRGISETEEYDVVIANILL-----------------------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla-----------------------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
..+ ..++||+|++|+.. ..+..++..+.++|||||++++.
T Consensus 113 ----~~~-~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 113 ----DLI-PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp ----GTS-CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hhh-ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 011 25789999999753 23467889999999999999984
No 31
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.01 E-value=2.3e-09 Score=98.61 Aligned_cols=109 Identities=15% Similarity=0.242 Sum_probs=82.6
Q ss_pred eeEEEccCcccCCCchhhHHHHHHHHHhhh-cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhc
Q 041970 185 TNIILNPGLAFGTGEHATTKLCLLLLRSLI-KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 185 ~~I~idPG~AFGTG~H~TT~lcLe~Le~~~-~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lN 243 (327)
..+.++||.-+ ..|.|...++++.+.+ .++.+|||+|| +|+++.+++.|++|++.+
T Consensus 80 ~~~~~~~~~~i---pr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~ 156 (276)
T 2b3t_A 80 LPLFVSPATLI---PRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL 156 (276)
T ss_dssp EEEECCTTSCC---CCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCcc---cCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 35667777543 2567777777776665 56789999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------------------
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------------------- 298 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------------------- 298 (327)
++. ++++. .+|.. + .. ..++||+|++|+..
T Consensus 157 ~~~--~v~~~--~~d~~---------~-----------~~-~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~ 211 (276)
T 2b3t_A 157 AIK--NIHIL--QSDWF---------S-----------AL-AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAAD 211 (276)
T ss_dssp TCC--SEEEE--CCSTT---------G-----------GG-TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHH
T ss_pred CCC--ceEEE--Ecchh---------h-----------hc-ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCC
Confidence 985 46664 56652 0 11 14689999999532
Q ss_pred ---HHHHHHHHHHhhccCCCcEEEEe
Q 041970 299 ---NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 299 ---~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
..+..++..+.++|+|||++++.
T Consensus 212 ~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 212 SGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 35677889999999999999885
No 32
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.98 E-value=1.7e-09 Score=98.91 Aligned_cols=92 Identities=13% Similarity=0.057 Sum_probs=65.5
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCC---------------------------
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPK--------------------------- 248 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~--------------------------- 248 (327)
.+|++|||+|| +|+++.+|+.|+++++.+....+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 46789999999 99999999999999877632100
Q ss_pred cEE-EEecCCCCCCCCccccccchhhhcccccccCCC--CCCCeeEEEEcCChHHH-------HHHHHHHhhccCCCcEE
Q 041970 249 KMK-LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGIS--ETEEYDVVIANILLNPL-------LQLADHIVSYAKPGAVV 318 (327)
Q Consensus 249 ~v~-v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~--~~~~fDlVvANIla~vL-------~~L~p~i~~~LkpGG~L 318 (327)
++. +. .+|+. +. ..+. ..++||+|+|+...+.+ ..++..+.++|||||+|
T Consensus 134 ~i~~~~--~~D~~---------~~---------~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~l 193 (263)
T 2a14_A 134 AVKRVL--KCDVH---------LG---------NPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHL 193 (263)
T ss_dssp HEEEEE--ECCTT---------SS---------STTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhheEE--ecccc---------CC---------CCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEE
Confidence 122 22 34542 00 0010 14589999999876643 57888999999999999
Q ss_pred EEeeccCC
Q 041970 319 GISGILSE 326 (327)
Q Consensus 319 IlSGIl~~ 326 (327)
++++++.+
T Consensus 194 i~~~~~~~ 201 (263)
T 2a14_A 194 VTTVTLRL 201 (263)
T ss_dssp EEEEESSC
T ss_pred EEEEeecC
Confidence 99997653
No 33
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.97 E-value=1e-09 Score=98.40 Aligned_cols=104 Identities=18% Similarity=0.289 Sum_probs=77.8
Q ss_pred CCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 196 GTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 196 GTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
|.|....++..++.+.. +.++.+|||+|| +|+++.+++.|++|++.+++. +++++. .
T Consensus 27 ~~~~~~~~~~~l~~l~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~--~ 102 (257)
T 3f4k_A 27 GPGSPEATRKAVSFINE-LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA-DRVKGI--T 102 (257)
T ss_dssp SSCCHHHHHHHHTTSCC-CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--E
T ss_pred CCCCHHHHHHHHHHHhc-CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC-CceEEE--E
Confidence 45556666666655542 356789999999 999999999999999999987 567775 3
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH--HHHHHHHHHhhccCCCcEEEEeec
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN--PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~--vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+|.. ++ .. +.++||+|++|-... ....++..+.+.|||||+++++..
T Consensus 103 ~d~~---------~~----------~~-~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 103 GSMD---------NL----------PF-QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CCTT---------SC----------SS-CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CChh---------hC----------CC-CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 5541 10 11 257899999985432 256788999999999999999864
No 34
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.95 E-value=2.8e-09 Score=93.02 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=69.6
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
++++.+|||+|| +|+++.+++.|++|++.+++. ++++. .+|.. +
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~--~~d~~---------~--- 101 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVAR--NVTLV--EAFAP---------E--- 101 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCT--TEEEE--ECCTT---------T---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEE--eCChh---------h---
Confidence 457889999999 999999999999999999984 57664 35542 0
Q ss_pred hcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 274 YLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.....++||+|++|.....+..++..+.+.|+|||+++++...
T Consensus 102 --------~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 102 --------GLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp --------TCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred --------hhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 1111367999999987667788999999999999999998653
No 35
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.95 E-value=2e-09 Score=102.85 Aligned_cols=112 Identities=14% Similarity=0.169 Sum_probs=89.3
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-----------------ecCCHHHHHHHHHHHHhcCC
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-----------------VDIDPQVIKSAHQNAALNNI 245 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-----------------VDIDp~AV~~A~eNa~lNgv 245 (327)
+...+.+||+.+|-+..|.+.++ .+.+++.+|++|||+|| +|+++.|++.|++|+++|++
T Consensus 165 ~g~~f~~d~~~~~~~~~~~~er~---~i~~~~~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l 241 (336)
T 2yx1_A 165 NGYRLWVDIAKVYFSPRLGGERA---RIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKL 241 (336)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHH---HHHHHCCTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEehHHhccCCccHHHHH---HHHHhcCCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 45678899999888888989987 34455678999999999 99999999999999999998
Q ss_pred CCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 246 GPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 246 ~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. +++++. .+|.. .. .++||+|++|+.... ..++..+.+.|+|||+++++..-
T Consensus 242 ~-~~v~~~--~~D~~---------------------~~--~~~fD~Vi~dpP~~~-~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 242 E-HKIIPI--LSDVR---------------------EV--DVKGNRVIMNLPKFA-HKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp T-TTEEEE--ESCGG---------------------GC--CCCEEEEEECCTTTG-GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred C-CcEEEE--ECChH---------------------Hh--cCCCcEEEECCcHhH-HHHHHHHHHHcCCCCEEEEEEee
Confidence 6 467764 45542 11 168999999976443 36788889999999999987653
No 36
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.95 E-value=1.7e-09 Score=98.27 Aligned_cols=104 Identities=17% Similarity=0.208 Sum_probs=78.2
Q ss_pred CCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 196 GTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 196 GTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
+.|..+.++.+++.+. .++++.+|||+|| +|+++.+++.|++|++.+++. +++++. .
T Consensus 27 ~~~~~~~~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~ 102 (267)
T 3kkz_A 27 GPGSPEVTLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ-NRVTGI--V 102 (267)
T ss_dssp SSCCHHHHHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--E
T ss_pred CCCCHHHHHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC-cCcEEE--E
Confidence 3445566666666654 3467889999999 999999999999999999986 567775 3
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH--HHHHHHHHhhccCCCcEEEEeec
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP--LLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v--L~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+|.. ++ .. +.++||+|+++-.... ...++..+.+.|||||+++++.+
T Consensus 103 ~d~~---------~~----------~~-~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 103 GSMD---------DL----------PF-RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CCTT---------SC----------CC-CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cChh---------hC----------CC-CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 5541 10 11 2578999999865433 46678899999999999999875
No 37
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.94 E-value=3.7e-09 Score=91.41 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+.+.-.++...+++|++|||+|| +|+++.+++.|++|++.+++. .++++. .+|..
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~- 84 (197)
T 3eey_A 9 LGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI-DRVTLI--KDGHQ- 84 (197)
T ss_dssp HHHHHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG-GGEEEE--CSCGG-
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEE--ECCHH-
Confidence 44455556666788899999999 999999999999999999985 467764 45541
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------------HHHHHHHHHHhhccCCCcEEEEee
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------------NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------------~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++. .. ..++||+|++|... .....++..+.+.|||||++++..
T Consensus 85 --------~~~---------~~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 85 --------NMD---------KY-IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp --------GGG---------GT-CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------HHh---------hh-ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 111 11 24689999999733 234568889999999999999874
No 38
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.94 E-value=2.2e-09 Score=102.36 Aligned_cols=110 Identities=18% Similarity=0.269 Sum_probs=85.9
Q ss_pred ceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhc
Q 041970 184 ATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 184 ~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lN 243 (327)
...+...||+.+....++.++++++.+.. .++.+|||+|| +|+++.+++.|++|++.|
T Consensus 166 ~~~~~~~~gvf~~~~~d~~~~~ll~~l~~--~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~ 243 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDGLDVGSQLLLSTLTP--HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN 243 (343)
T ss_dssp TEEEEECTTCTTSSSCCHHHHHHHHHSCT--TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT
T ss_pred ceEEEecCCccCCCCCcHHHHHHHHhcCc--CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh
Confidence 35678899997767778899999888742 35679999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--------HHHHHHHHHHhhccCCC
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--------NPLLQLADHIVSYAKPG 315 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--------~vL~~L~p~i~~~LkpG 315 (327)
++. . ++. .+|.. .. ..++||+|++|... .....++..+.++||||
T Consensus 244 ~~~-~--~~~--~~d~~---------------------~~-~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkpg 296 (343)
T 2pjd_A 244 GVE-G--EVF--ASNVF---------------------SE-VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSG 296 (343)
T ss_dssp TCC-C--EEE--ECSTT---------------------TT-CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEE
T ss_pred CCC-C--EEE--Ecccc---------------------cc-ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCC
Confidence 986 2 332 34542 01 14689999999753 34577899999999999
Q ss_pred cEEEEee
Q 041970 316 AVVGISG 322 (327)
Q Consensus 316 G~LIlSG 322 (327)
|.+++.+
T Consensus 297 G~l~i~~ 303 (343)
T 2pjd_A 297 GELRIVA 303 (343)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999864
No 39
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=9.7e-09 Score=93.35 Aligned_cols=102 Identities=17% Similarity=0.308 Sum_probs=76.6
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...|..+... .++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|..
T Consensus 51 ~~~~l~~l~~~-~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~--~~d~~- 125 (248)
T 3tfw_A 51 QGQFLALLVRL-TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD-QRVTLR--EGPAL- 125 (248)
T ss_dssp HHHHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEE--ESCHH-
T ss_pred HHHHHHHHHhh-cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--EcCHH-
Confidence 33444444333 46789999999 999999999999999999987 578875 35531
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
+.+ ......++||+|+++........++..+.++|||||+|++..++-
T Consensus 126 --------~~l--------~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 126 --------QSL--------ESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp --------HHH--------HTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred --------HHH--------HhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 111 112123589999999887777788999999999999999988763
No 40
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.91 E-value=1.3e-09 Score=103.08 Aligned_cols=117 Identities=16% Similarity=0.269 Sum_probs=82.7
Q ss_pred EcCCCCCceeEEEccCcccCCCchhh-HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHH
Q 041970 177 VPEWNVQATNIILNPGLAFGTGEHAT-TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIK 234 (327)
Q Consensus 177 ~P~W~~~~~~I~idPG~AFGTG~H~T-T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~ 234 (327)
.|.|+. ..+.+++|++| .||+ ++.+++.+. +.+|++|||+|| +|+++.+++
T Consensus 72 ~p~~~~--~~~~~~~~~~~---~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~ 144 (336)
T 2b25_A 72 RPALED--YVVLMKRGTAI---TFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHD 144 (336)
T ss_dssp CCCHHH--HHHHSCCSSCC---CCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHH
T ss_pred CCCHHH--HhhhhcCCCcc---cCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHH
Confidence 566642 33558899998 4666 888998884 578999999999 999999999
Q ss_pred HHHHHHHh-------cCCC--CCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHH
Q 041970 235 SAHQNAAL-------NNIG--PKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLA 305 (327)
Q Consensus 235 ~A~eNa~l-------Ngv~--~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~ 305 (327)
.|++|++. |++. .+++++. .+|.. +.. ..+ ..++||+|++|+..... ++
T Consensus 145 ~a~~~~~~~~~~~~ln~~~~~~~~v~~~--~~d~~---------~~~--------~~~-~~~~fD~V~~~~~~~~~--~l 202 (336)
T 2b25_A 145 LAKKNYKHWRDSWKLSHVEEWPDNVDFI--HKDIS---------GAT--------EDI-KSLTFDAVALDMLNPHV--TL 202 (336)
T ss_dssp HHHHHHHHHHHHHTTTCSSCCCCCEEEE--ESCTT---------CCC----------------EEEEEECSSSTTT--TH
T ss_pred HHHHHHHHhhcccccccccccCCceEEE--ECChH---------Hcc--------ccc-CCCCeeEEEECCCCHHH--HH
Confidence 99999984 5553 1356664 45542 000 011 14579999999864432 67
Q ss_pred HHHhhccCCCcEEEEee
Q 041970 306 DHIVSYAKPGAVVGISG 322 (327)
Q Consensus 306 p~i~~~LkpGG~LIlSG 322 (327)
+.+.+.|+|||+|++..
T Consensus 203 ~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 203 PVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp HHHGGGEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEe
Confidence 88999999999998753
No 41
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.91 E-value=5.9e-09 Score=92.28 Aligned_cols=88 Identities=24% Similarity=0.428 Sum_probs=65.6
Q ss_pred HHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcccccc
Q 041970 210 LRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVD 269 (327)
Q Consensus 210 Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~ 269 (327)
+...+++|++|||+|| +|+|+.+++.|++|++.|++ ++++. .+|..
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~--~~d~~--------- 114 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS---NVRLV--KSNGG--------- 114 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEE--ECSSC---------
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC---CcEEE--eCCch---------
Confidence 4555677788888888 99999999999999999987 35554 35531
Q ss_pred chhhhcccccccCCCCCCCeeEEEEcCCh----------------------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 270 GIVEYLSSHKIRGISETEEYDVVIANILL----------------------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~fDlVvANIla----------------------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+ ..+ ..++||+|++|+.. ..+..++..+.++|||||++++.
T Consensus 115 ~~---------~~~-~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 115 II---------KGV-VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp SS---------TTT-CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hh---------hhc-ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 00 012 14789999999653 22477889999999999999873
No 42
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.90 E-value=4.1e-09 Score=94.66 Aligned_cols=88 Identities=15% Similarity=0.204 Sum_probs=70.8
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|.. +..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~~~-- 135 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE-NQVRII--EGNAL---------EQF-- 135 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEE--ESCGG---------GCH--
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--ECCHH---------HHH--
Confidence 46789999999 999999999999999999986 568775 45542 111
Q ss_pred ccccccc-CCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIR-GISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~-~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. .. .++||+|+++.....+..++..+.+.|||||+|++..++
T Consensus 136 ------~~~~--~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 136 ------ENVN--DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ------HHHT--TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ------Hhhc--cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 0 01 468999999987777788999999999999999997665
No 43
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.89 E-value=4.5e-09 Score=94.18 Aligned_cols=98 Identities=18% Similarity=0.230 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHhh--hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSL--IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~--~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
|.+...++.+.+. +.++.+|||+|| +|+++.+++.|++|++.+++. +++++. .+|.
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~v~~~--~~d~ 95 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS-ERVHFI--HNDA 95 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--ESCC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC-cceEEE--ECCh
Confidence 4444455555444 357889999999 999999999999999999986 467765 3554
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
. + ....++||+|+++-.... ...++..+.++|||||+++++.
T Consensus 96 ~---------~------------~~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 96 A---------G------------YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp T---------T------------CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred H---------h------------CCcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 2 1 111468999999755433 4677889999999999999874
No 44
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.89 E-value=3.4e-09 Score=95.41 Aligned_cols=104 Identities=14% Similarity=0.221 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHhhhc--CCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041970 201 ATTKLCLLLLRSLIK--GGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPD 257 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~--~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~ 257 (327)
|.+...|.+|.+... ++.+|||+|| +|+++.+++.|++|++.+|+..+++++. .+
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~--~g 116 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFL--LS 116 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE--CS
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE--Ec
Confidence 566777777776643 2249999999 9999999999999999999863578875 45
Q ss_pred CCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 258 RTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 258 d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
|.. +.+. .. ..++||+|+++........++..+.++|||||++++..++
T Consensus 117 da~---------~~l~--------~~-~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 117 RPL---------DVMS--------RL-ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp CHH---------HHGG--------GS-CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred CHH---------HHHH--------Hh-cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 542 1110 11 1468999999987777778899999999999999998765
No 45
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.89 E-value=2.4e-09 Score=89.70 Aligned_cols=111 Identities=12% Similarity=0.100 Sum_probs=72.3
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhh----hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhc
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSL----IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~----~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lN 243 (327)
.+...|| ..||+....+.+-+. +.++++|||+|| +|+++.+++.|++|++.+
T Consensus 13 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~ 86 (171)
T 1ws6_A 13 ALKVPAS------ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT 86 (171)
T ss_dssp EECCCTT------CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH
T ss_pred EecCCCC------CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc
Confidence 4555666 445555444444333 327889999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-HHHHHHHHHHh--hccCCCcEEEE
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-NPLLQLADHIV--SYAKPGAVVGI 320 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-~vL~~L~p~i~--~~LkpGG~LIl 320 (327)
++ ++++. .+|.. +.... .....++||+|++|... .....++..+. ++|+|||++++
T Consensus 87 ~~---~~~~~--~~d~~---------~~~~~-------~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 87 GL---GARVV--ALPVE---------VFLPE-------AKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp TC---CCEEE--CSCHH---------HHHHH-------HHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred CC---ceEEE--eccHH---------HHHHh-------hhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEE
Confidence 87 35553 45531 11100 00013479999999643 23334445555 99999999998
Q ss_pred eec
Q 041970 321 SGI 323 (327)
Q Consensus 321 SGI 323 (327)
+--
T Consensus 146 ~~~ 148 (171)
T 1ws6_A 146 QHP 148 (171)
T ss_dssp EEE
T ss_pred EeC
Confidence 754
No 46
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.89 E-value=7.5e-09 Score=91.33 Aligned_cols=106 Identities=15% Similarity=0.268 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+.+...+..+... .++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|.
T Consensus 44 ~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~ 119 (223)
T 3duw_A 44 PTQGKFLQLLVQI-QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN-DRVEVR--TGLA 119 (223)
T ss_dssp HHHHHHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--ESCH
T ss_pred HHHHHHHHHHHHh-hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--EcCH
Confidence 4445555555443 46789999999 999999999999999999987 568775 3554
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
. +..... .. ...++||+|+++........++..+.++|+|||++++.+++-
T Consensus 120 ~---------~~~~~~-----~~-~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 120 L---------DSLQQI-----EN-EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp H---------HHHHHH-----HH-TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred H---------HHHHHH-----Hh-cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 1 111000 00 002579999999887777888999999999999999987653
No 47
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.88 E-value=6.3e-09 Score=97.21 Aligned_cols=109 Identities=18% Similarity=0.355 Sum_probs=78.9
Q ss_pred eeEEEccCcccCCCchhhHHHHHHHHHhhhc--CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc
Q 041970 185 TNIILNPGLAFGTGEHATTKLCLLLLRSLIK--GGELFLDYGT-------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 185 ~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~--~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN 243 (327)
..+.++||.-+ ..|.|...++++.+.+. ++.+|||+|| +|+++.|++.|++|++.|
T Consensus 93 ~~~~v~~~~li---pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~ 169 (284)
T 1nv8_A 93 LSFLVEEGVFV---PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH 169 (284)
T ss_dssp EEEECCTTSCC---CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT
T ss_pred eEEEeCCCcee---cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 45666776643 34667777776665543 6789999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCe---eEEEEcCCh-------------HHH------
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEY---DVVIANILL-------------NPL------ 301 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~f---DlVvANIla-------------~vL------ 301 (327)
++. +++++. .+|.. + .+ .++| |+|++|+.. ++.
T Consensus 170 ~l~-~~v~~~--~~D~~---------~-----------~~--~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~ 224 (284)
T 1nv8_A 170 GVS-DRFFVR--KGEFL---------E-----------PF--KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGG 224 (284)
T ss_dssp TCT-TSEEEE--ESSTT---------G-----------GG--GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCT
T ss_pred CCC-CceEEE--ECcch---------h-----------hc--ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCC
Confidence 986 567775 46652 0 01 2467 999999532 111
Q ss_pred ---HHHHHHHh-hccCCCcEEEEe
Q 041970 302 ---LQLADHIV-SYAKPGAVVGIS 321 (327)
Q Consensus 302 ---~~L~p~i~-~~LkpGG~LIlS 321 (327)
..+...+. +.++|||+|++.
T Consensus 225 ~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 225 EDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CcHHHHHHHHHHhcCCCCCEEEEE
Confidence 15677888 999999999873
No 48
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.87 E-value=5.2e-09 Score=88.35 Aligned_cols=87 Identities=13% Similarity=0.051 Sum_probs=66.0
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
..++++|||+|| +|+++.+++.|++|++.+++. +++ +. .+|.. +.+.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~-~~--~~d~~--------~~~~- 89 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS-DRI-AV--QQGAP--------RAFD- 89 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT-TSE-EE--ECCTT--------GGGG-
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC-CCE-EE--ecchH--------hhhh-
Confidence 357789999999 999999999999999999986 456 43 34431 1110
Q ss_pred hcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 274 YLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. ..++||+|+++..... ..++..+.+.|+|||+++++.+.
T Consensus 90 --------~--~~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 90 --------D--VPDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp --------G--CCSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred --------c--cCCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 0 1268999999876544 66888999999999999998753
No 49
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.87 E-value=4.4e-09 Score=97.41 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=83.6
Q ss_pred CceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh
Q 041970 183 QATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL 242 (327)
Q Consensus 183 ~~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l 242 (327)
....+.++|+..|=+-...+.++.+ ...+.+|++|||+|| +|+++.|++.|++|+++
T Consensus 89 ~g~~f~~~~~~~f~~~~~~~e~~~~---~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~ 165 (272)
T 3a27_A 89 YGCLFKLDVAKIMWSQGNIEERKRM---AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL 165 (272)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHHH---HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH
T ss_pred CCEEEEEechhEEECCCchHHHHHH---HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 3467889998776555555544432 233678899999999 99999999999999999
Q ss_pred cCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 243 NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 243 Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
|++. ++.+. .+|.. + ....++||+|++|... -+..++..+.+.|+|||++++|.
T Consensus 166 n~l~--~~~~~--~~d~~---------~------------~~~~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 166 NKLN--NVIPI--LADNR---------D------------VELKDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp TTCS--SEEEE--ESCGG---------G------------CCCTTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCCC--CEEEE--ECChH---------H------------cCccCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEE
Confidence 9986 35553 45542 1 1114589999999886 34456778889999999999987
Q ss_pred cc
Q 041970 323 IL 324 (327)
Q Consensus 323 Il 324 (327)
..
T Consensus 220 ~~ 221 (272)
T 3a27_A 220 TV 221 (272)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 50
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.87 E-value=1.1e-08 Score=89.93 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=74.1
Q ss_pred chhhHHHHHHHHHhhh--cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCC---CcEEEE
Q 041970 199 EHATTKLCLLLLRSLI--KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGP---KKMKLH 253 (327)
Q Consensus 199 ~H~TT~lcLe~Le~~~--~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~---~~v~v~ 253 (327)
.|+.....++++.+.+ .++.+|||+|| +|+++.+++.|++|+..+++.. .++++.
T Consensus 10 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (219)
T 3jwg_A 10 KLNLNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF 89 (219)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred CCcchHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEE
Confidence 4777788888887765 46789999999 9999999999999999888751 156664
Q ss_pred ecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEe
Q 041970 254 LVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 254 ~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+|+. .. .. ..++||+|+++-.. ..+..++..+.+.|||||+++..
T Consensus 90 --~~d~~---------~~----------~~-~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 90 --QSSLV---------YR----------DK-RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp --ECCSS---------SC----------CG-GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred --eCccc---------cc----------cc-ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 35541 00 01 24689999998543 24467889999999999976653
No 51
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.84 E-value=6.5e-09 Score=88.04 Aligned_cols=100 Identities=18% Similarity=0.267 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHhh--hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041970 201 ATTKLCLLLLRSL--IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTF 260 (327)
Q Consensus 201 ~TT~lcLe~Le~~--~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~ 260 (327)
+++....+++.+. ..++.+|||+|| +|+++.+++.|++|++.+++. .++.+. .+|..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~~~~~--~~d~~ 92 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG-DNVTLM--EGDAP 92 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-TTEEEE--ESCHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCC-cceEEE--ecCHH
Confidence 5555555555444 357789999999 999999999999999999984 456664 34431
Q ss_pred CCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 261 PSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 261 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+. +...++||+|+++...+.+..++..+.+.|+|||+++++..
T Consensus 93 ---------~~-----------~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 93 ---------EA-----------LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp ---------HH-----------HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ---------Hh-----------cccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 10 11125899999998766678899999999999999998753
No 52
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.84 E-value=3.5e-09 Score=92.49 Aligned_cols=102 Identities=13% Similarity=0.227 Sum_probs=70.6
Q ss_pred cccCCCchhhHHHHHHHHHhh--hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEE
Q 041970 193 LAFGTGEHATTKLCLLLLRSL--IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKL 252 (327)
Q Consensus 193 ~AFGTG~H~TT~lcLe~Le~~--~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v 252 (327)
..+|.|.+.+.......+.+. .+++++|||+|| +|+++.+++.|++|++.+++. ++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~ 129 (210)
T 3lbf_A 52 LPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH--NVST 129 (210)
T ss_dssp EECTTSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCC--SEEE
T ss_pred cccCCCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC--ceEE
Confidence 344555544444444444433 357889999999 999999999999999999885 4666
Q ss_pred EecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 253 HLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 253 ~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
. .+|.. + .....++||+|++|-....+ .+.+.+.|||||+++++
T Consensus 130 ~--~~d~~---------~-----------~~~~~~~~D~i~~~~~~~~~---~~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 130 R--HGDGW---------Q-----------GWQARAPFDAIIVTAAPPEI---PTALMTQLDEGGILVLP 173 (210)
T ss_dssp E--ESCGG---------G-----------CCGGGCCEEEEEESSBCSSC---CTHHHHTEEEEEEEEEE
T ss_pred E--ECCcc---------c-----------CCccCCCccEEEEccchhhh---hHHHHHhcccCcEEEEE
Confidence 4 35542 0 11124689999998543322 24678999999999886
No 53
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.83 E-value=1.7e-08 Score=88.73 Aligned_cols=96 Identities=13% Similarity=0.166 Sum_probs=69.4
Q ss_pred HHHHHHHHhhh--cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCC---CcEEEEecCCC
Q 041970 204 KLCLLLLRSLI--KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGP---KKMKLHLVPDR 258 (327)
Q Consensus 204 ~lcLe~Le~~~--~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~---~~v~v~~~~~d 258 (327)
+.-++++.+.+ .++.+|||+|| +|+++.+++.|++|++.+++.. .++++. .+|
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d 92 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLI--QGA 92 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEE--ECC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEE--eCC
Confidence 34444444443 46789999999 9999999999999999888751 157764 355
Q ss_pred CCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEe
Q 041970 259 TFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 259 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlS 321 (327)
+. .. .. ..++||+|+++-..+ .+..++..+.+.|||||+++..
T Consensus 93 ~~---------~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 93 LT---------YQ----------DK-RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp TT---------SC----------CG-GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cc---------cc----------cc-cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 41 00 01 146899999986543 5578899999999999987764
No 54
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.83 E-value=1.5e-08 Score=89.41 Aligned_cols=104 Identities=16% Similarity=0.207 Sum_probs=75.6
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...+..+... .++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|..
T Consensus 52 ~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~- 126 (225)
T 3tr6_A 52 QAQLLALLVKL-MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS-DKIGLR--LSPAK- 126 (225)
T ss_dssp HHHHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--ESCHH-
T ss_pred HHHHHHHHHHh-hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC-CceEEE--eCCHH-
Confidence 33444444433 46779999999 999999999999999999987 568775 34531
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+..... ..-...++||+|+.+........++..+.++|||||+|++..++
T Consensus 127 --------~~~~~~-----~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 127 --------DTLAEL-----IHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp --------HHHHHH-----HTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred --------HHHHHh-----hhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 111000 00000168999999988777888899999999999999998775
No 55
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.82 E-value=9.9e-09 Score=95.54 Aligned_cols=94 Identities=21% Similarity=0.293 Sum_probs=73.3
Q ss_pred HHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 207 LLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
.+.|...++++.+|||+|| +|+++.+++.|++|++.+++. +++++. .+|..
T Consensus 109 ~~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~----- 180 (305)
T 3ocj_A 109 RRALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA-GQITLH--RQDAW----- 180 (305)
T ss_dssp HHHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEE--ECCGG-----
T ss_pred HHHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC-CceEEE--ECchh-----
Confidence 3566666788999999999 999999999999999999986 577775 35542
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcCChH------HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANILLN------PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+ ....++||+|++|.... ....++..+.+.|||||+|+++.+.
T Consensus 181 ----~------------~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 181 ----K------------LDTREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp ----G------------CCCCSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ----c------------CCccCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 1 11137899999986432 2335789999999999999998754
No 56
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.82 E-value=1.5e-08 Score=87.83 Aligned_cols=75 Identities=19% Similarity=0.192 Sum_probs=58.0
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LL 302 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~ 302 (327)
+|+++.+++.|++|++.+++. .++++. .+|.. ++ .+ +.++||+|++|-..+. ..
T Consensus 72 ~D~s~~~~~~a~~~~~~~~~~-~~~~~~--~~d~~---------~~----------~~-~~~~~D~v~~~~~l~~~~~~~ 128 (219)
T 3dlc_A 72 LDFSKHMNEIALKNIADANLN-DRIQIV--QGDVH---------NI----------PI-EDNYADLIVSRGSVFFWEDVA 128 (219)
T ss_dssp EESCHHHHHHHHHHHHHTTCT-TTEEEE--ECBTT---------BC----------SS-CTTCEEEEEEESCGGGCSCHH
T ss_pred EECCHHHHHHHHHHHHhcccc-CceEEE--EcCHH---------HC----------CC-CcccccEEEECchHhhccCHH
Confidence 999999999999999999986 567765 34431 10 11 2578999999975443 36
Q ss_pred HHHHHHhhccCCCcEEEEeec
Q 041970 303 QLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 303 ~L~p~i~~~LkpGG~LIlSGI 323 (327)
.++..+.+.|+|||+++++..
T Consensus 129 ~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 129 TAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCCEEEEEec
Confidence 788999999999999999864
No 57
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.81 E-value=1.1e-08 Score=89.04 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 216 GGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 216 ~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
++.+|||+|| +|+++.+++.|++|++.+++. + +++. .+|..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~-v~~~--~~d~~--------------- 125 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-N-IEPV--QSRVE--------------- 125 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-S-EEEE--ECCTT---------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-C-eEEE--ecchh---------------
Confidence 4789999999 999999999999999999886 3 6664 45542
Q ss_pred ccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 276 SSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.....++||+|++|... .+..++..+.+.|+|||++++.
T Consensus 126 ------~~~~~~~~D~i~~~~~~-~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 126 ------EFPSEPPFDGVISRAFA-SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ------TSCCCSCEEEEECSCSS-SHHHHHHHHTTSEEEEEEEEEE
T ss_pred ------hCCccCCcCEEEEeccC-CHHHHHHHHHHhcCCCcEEEEE
Confidence 11124689999999764 4567889999999999999875
No 58
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.81 E-value=9.2e-09 Score=97.79 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=68.0
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
+++|++|||||| +|+||.+++.|++|++..|+ +++++. .+|.. +
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl--~~v~~v--~gDa~---------~--- 183 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV--DGVNVI--TGDET---------V--- 183 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC--CSEEEE--ESCGG---------G---
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC--CCeEEE--ECchh---------h---
Confidence 568889999999 99999999999999999988 467775 45642 1
Q ss_pred hcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 274 YLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
+. .++||+|+.+.......++++.+.+.|||||+|++..
T Consensus 184 ---------l~-d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 184 ---------ID-GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ---------GG-GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---------CC-CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 11 4689999988776666788999999999999999764
No 59
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.81 E-value=2.9e-08 Score=88.00 Aligned_cols=101 Identities=13% Similarity=0.240 Sum_probs=70.1
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...+..+... .++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|..
T Consensus 46 ~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~- 120 (221)
T 3u81_A 46 KGQIMDAVIRE-YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ-DKVTIL--NGASQ- 120 (221)
T ss_dssp HHHHHHHHHHH-HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEE--ESCHH-
T ss_pred HHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CceEEE--ECCHH-
Confidence 33334444333 46789999999 999999999999999999986 578875 45531
Q ss_pred CCccccccchhhhcccccccCCC---CCCCeeEEEEcCChHHHH---HHHHHHhhccCCCcEEEEeeccC
Q 041970 262 SSMNERVDGIVEYLSSHKIRGIS---ETEEYDVVIANILLNPLL---QLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~---~~~~fDlVvANIla~vL~---~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
+.+. ... ..++||+|+++....... .++..+ ++|||||+|+++.+..
T Consensus 121 --------~~l~--------~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 121 --------DLIP--------QLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp --------HHGG--------GTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred --------HHHH--------HHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 1110 111 126899999998654443 344455 9999999999987753
No 60
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.81 E-value=1.1e-08 Score=94.83 Aligned_cols=106 Identities=16% Similarity=0.127 Sum_probs=70.0
Q ss_pred hhhHHHHHHHHHhhh--cCCCeeeeeee-------------------ecC-CHHHHHHHHHHHHhc-----CCCC---Cc
Q 041970 200 HATTKLCLLLLRSLI--KGGELFLDYGT-------------------VDI-DPQVIKSAHQNAALN-----NIGP---KK 249 (327)
Q Consensus 200 H~TT~lcLe~Le~~~--~~g~~VLDvGc-------------------VDI-Dp~AV~~A~eNa~lN-----gv~~---~~ 249 (327)
.|.|..+.+++.+.. .+|++|||+|| +|+ ++.+++.|++|+++| ++.. ++
T Consensus 61 ~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~ 140 (281)
T 3bzb_A 61 WSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRAS 140 (281)
T ss_dssp -CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CC
T ss_pred ecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCC
Confidence 345899999998875 57889999999 999 999999999999555 4320 13
Q ss_pred EEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEE-cCChH--HHHHHHHHHhhccC---C--CcEEEEe
Q 041970 250 MKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIA-NILLN--PLLQLADHIVSYAK---P--GAVVGIS 321 (327)
Q Consensus 250 v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvA-NIla~--vL~~L~p~i~~~Lk---p--GG~LIlS 321 (327)
+++.. .+.. .....+.. .+ ..++||+|++ +++.+ .+..+++.+.++|+ | ||++++.
T Consensus 141 v~~~~--~~~~-----~~~~~~~~--------~~-~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 141 PKVVP--YRWG-----DSPDSLQR--------CT-GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp CEEEE--CCTT-----SCTHHHHH--------HH-SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred eEEEE--ecCC-----CccHHHHh--------hc-cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 44431 1210 00011100 00 1468999997 76643 36788999999999 9 9976553
No 61
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.80 E-value=2.9e-08 Score=90.86 Aligned_cols=98 Identities=11% Similarity=0.023 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHhh--hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSL--IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~--~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+..+..++.+.+. +.+|.+|||+|| +|+++.+++.|+++++.+++. .++++. .+|.
T Consensus 47 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~-~~~~~~--~~d~ 123 (287)
T 1kpg_A 47 EAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL-RSKRVL--LAGW 123 (287)
T ss_dssp HHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC-SCEEEE--ESCG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCC-CCeEEE--ECCh
Confidence 3444444444444 357889999999 999999999999999998876 467764 3443
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. .+ .++||+|+++-..+ ....++..+.+.|||||+++++.+.
T Consensus 124 ~---------------------~~--~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 124 E---------------------QF--DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp G---------------------GC--CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred h---------------------hC--CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 1 12 26899999985433 3467889999999999999998754
No 62
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.80 E-value=2.7e-08 Score=87.18 Aligned_cols=98 Identities=19% Similarity=0.152 Sum_probs=74.1
Q ss_pred hhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 200 HATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 200 H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
....+..++.+.+++.++.+|||+|| +|+++.+++.|++|++.++. ++++. .+|..
T Consensus 22 ~~~~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~--~~d~~- 95 (227)
T 1ve3_A 22 RSRIETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRES---NVEFI--VGDAR- 95 (227)
T ss_dssp HHHHHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CCEEE--ECCTT-
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC---CceEE--ECchh-
Confidence 35566777777777777899999999 99999999999999998872 35554 35542
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCC--h---HHHHHHHHHHhhccCCCcEEEEee
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL--L---NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl--a---~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++ .. +.++||+|++|-. . .....++..+.+.|+|||++++..
T Consensus 96 --------~~----------~~-~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 96 --------KL----------SF-EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp --------SC----------CS-CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------cC----------CC-CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 00 11 2468999999865 2 234678899999999999998864
No 63
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.80 E-value=5.9e-09 Score=95.72 Aligned_cols=91 Identities=12% Similarity=0.130 Sum_probs=65.1
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh---cCCCCCcEEEEecCCCCCCCCccccccch
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL---NNIGPKKMKLHLVPDRTFPSSMNERVDGI 271 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l---Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l 271 (327)
.++.+|||+|| +|+++.+++.|++|++. |++. +++++. .+|.. +.
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~-~~v~~~--~~D~~---------~~ 102 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS-ARIEVL--EADVT---------LR 102 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-GGEEEE--ECCTT---------CC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-ceEEEE--eCCHH---------HH
Confidence 46779999999 99999999999999999 9886 577775 46652 11
Q ss_pred hhhcccccccCCCCCCCeeEEEEcCChHH---------------------HHHHHHHHhhccCCCcEEEEe
Q 041970 272 VEYLSSHKIRGISETEEYDVVIANILLNP---------------------LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~fDlVvANIla~v---------------------L~~L~p~i~~~LkpGG~LIlS 321 (327)
... .....+ ..++||+|++|+.... +..++..+.++|||||+|++.
T Consensus 103 ~~~---~~~~~~-~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 103 AKA---RVEAGL-PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HHH---HHHTTC-CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhh---hhhhcc-CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 000 000011 2468999999964321 567888899999999999873
No 64
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.79 E-value=2.3e-08 Score=92.02 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=76.1
Q ss_pred CchhhHHHHHHHHHhhh------cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEE
Q 041970 198 GEHATTKLCLLLLRSLI------KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKL 252 (327)
Q Consensus 198 G~H~TT~lcLe~Le~~~------~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v 252 (327)
..++..+..++.+.+.+ .++.+|||+|| +|+++.+++.|+++++.+++. +++++
T Consensus 58 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~ 136 (297)
T 2o57_A 58 EIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA-DNITV 136 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT-TTEEE
T ss_pred chHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEE
Confidence 33444555555554444 57889999999 999999999999999999986 56776
Q ss_pred EecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEeecc
Q 041970 253 HLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 253 ~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. .+|.. ++ .+ +.++||+|+++-.... ...++..+.+.|||||+|+++...
T Consensus 137 ~--~~d~~---------~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 137 K--YGSFL---------EI----------PC-EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp E--ECCTT---------SC----------SS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred E--EcCcc---------cC----------CC-CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 5 35542 10 11 2568999999854322 467889999999999999998653
No 65
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.79 E-value=6.7e-09 Score=93.86 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=29.8
Q ss_pred CCeeEEEEcCCh------------HHHHHHHHHHhhccCCCcEEEEee
Q 041970 287 EEYDVVIANILL------------NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 287 ~~fDlVvANIla------------~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+||+|++|+.. +.+..++..+.++|+|||++++++
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeC
Confidence 479999999642 445688899999999999999864
No 66
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.79 E-value=1.3e-08 Score=90.43 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=69.7
Q ss_pred HHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcccc
Q 041970 206 CLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNER 267 (327)
Q Consensus 206 cLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~ 267 (327)
..+++.....++.+|||+|| +|+++.+++.|++|++.++.. .++++. .+|..
T Consensus 56 l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~------- 125 (235)
T 3lcc_A 56 IVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKA-EYFSFV--KEDVF------- 125 (235)
T ss_dssp HHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGG-GGEEEE--CCCTT-------
T ss_pred HHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCC-cceEEE--ECchh-------
Confidence 34555554445569999999 999999999999999876554 467764 45652
Q ss_pred ccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 268 VDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 268 ~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.....++||+|+++-.. .....++..+.+.|||||+|++...
T Consensus 126 --------------~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 126 --------------TWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp --------------TCCCSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --------------cCCCCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 11125589999998643 2556788999999999999998654
No 67
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.77 E-value=2.4e-08 Score=88.95 Aligned_cols=89 Identities=15% Similarity=0.253 Sum_probs=68.4
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|.. +...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~~~~- 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE-SRIELL--FGDAL---------QLGE- 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT-TTEEEE--CSCGG---------GSHH-
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--ECCHH---------HHHH-
Confidence 46778888888 999999999999999999986 567764 45542 1100
Q ss_pred cccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 275 LSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.....++||+|+++........++..+.+.|+|||+++++.+
T Consensus 120 -------~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 120 -------KLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp -------HHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred -------hcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 000136899999998776677888999999999999999854
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.76 E-value=3.9e-08 Score=86.99 Aligned_cols=92 Identities=15% Similarity=0.158 Sum_probs=69.4
Q ss_pred HHHHHHHHhhhcCCCeeeeeee-----------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 204 KLCLLLLRSLIKGGELFLDYGT-----------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 204 ~lcLe~Le~~~~~g~~VLDvGc-----------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
+-.++++.+++.++.+|||+|| +|+++.+++.|++|+..++. ++++. .+|..
T Consensus 21 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~--~~d~~------ 89 (243)
T 3d2l_A 21 PEWVAWVLEQVEPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNR---HVDFW--VQDMR------ 89 (243)
T ss_dssp HHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTC---CCEEE--ECCGG------
T ss_pred HHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCC---ceEEE--EcChh------
Confidence 4456677777888899999999 99999999999999988773 34553 34431
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcC--C-----hHHHHHHHHHHhhccCCCcEEEEe
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANI--L-----LNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANI--l-----a~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
+ ....++||+|+++. + ...+..++..+.++|+|||+++++
T Consensus 90 ---~------------~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 90 ---E------------LELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---G------------CCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---h------------cCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 11146899999974 2 144567888999999999999984
No 69
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.75 E-value=2.5e-08 Score=87.51 Aligned_cols=100 Identities=18% Similarity=0.213 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+.+...+..+... .++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|.
T Consensus 42 ~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~ 117 (210)
T 3c3p_A 42 RQTGRLLYLLARI-KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI-DRVELQ--VGDP 117 (210)
T ss_dssp HHHHHHHHHHHHH-HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG-GGEEEE--ESCH
T ss_pred HHHHHHHHHHHHh-hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-ceEEEE--EecH
Confidence 3445555555443 35779999999 999999999999999999886 567775 3443
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. +.. ... .+ ||+|+++........++..+.++|||||++++..++
T Consensus 118 ~---------~~~--------~~~--~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 118 L---------GIA--------AGQ--RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp H---------HHH--------TTC--CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred H---------HHh--------ccC--CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 1 111 011 35 999999976666778889999999999999986543
No 70
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.75 E-value=3.4e-08 Score=86.36 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=67.8
Q ss_pred chhhHH-HHHHHHHhhh--cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041970 199 EHATTK-LCLLLLRSLI--KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPD 257 (327)
Q Consensus 199 ~H~TT~-lcLe~Le~~~--~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~ 257 (327)
.++..+ ...+++...+ .++.+|||+|| +|+++.+++.|++|+..++ ++++. .+
T Consensus 31 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~--~~ 104 (216)
T 3ofk_A 31 DNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWS----HISWA--AT 104 (216)
T ss_dssp TCHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCS----SEEEE--EC
T ss_pred cCHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCC----CeEEE--Ec
Confidence 344444 3333444333 35579999999 9999999999999987653 46654 35
Q ss_pred CCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------HHHHHHHHHHhhccCCCcEEEEee
Q 041970 258 RTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 258 d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
|.. .....++||+|++|-.. ..+..++..+.+.|||||+++++-
T Consensus 105 d~~---------------------~~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 105 DIL---------------------QFSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CTT---------------------TCCCSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chh---------------------hCCCCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 542 11135789999998543 334677899999999999999864
No 71
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.74 E-value=8.6e-09 Score=97.13 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=79.3
Q ss_pred eE-EEccCcccCCCchhhHH-HHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHh
Q 041970 186 NI-ILNPGLAFGTGEHATTK-LCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAAL 242 (327)
Q Consensus 186 ~I-~idPG~AFGTG~H~TT~-lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~l 242 (327)
.+ .+++|.+|.+..+|... .+++.+. +++|++|||+|| +|+++.+++.|++|++.
T Consensus 45 ~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~ 122 (317)
T 1dl5_A 45 VLVSYDDGEEYSTSSQPSLMALFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER 122 (317)
T ss_dssp CEEEEECSSCEEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CcccccCCCcceeccCHHHHHHHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 45 78999888888877643 3333332 467899999999 99999999999999999
Q ss_pred cCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 243 NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 243 Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
+++. + +++. .+|.. + .....++||+|+++...+.+. ..+.+.|||||+++++-
T Consensus 123 ~g~~-~-v~~~--~~d~~---------~-----------~~~~~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 123 LGIE-N-VIFV--CGDGY---------Y-----------GVPEFSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp TTCC-S-EEEE--ESCGG---------G-----------CCGGGCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred cCCC-C-eEEE--ECChh---------h-----------ccccCCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 9986 3 6664 34531 1 011246899999997654332 57788999999999974
No 72
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.74 E-value=5e-08 Score=88.28 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=72.8
Q ss_pred HHHHHHHHHhhh--cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLI--KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~--~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
.+..++.+.+.+ .++.+|||+|| +|+++.+++.|+++++.+++. +++.+. .+|..
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~--~~d~~- 121 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA-NRVTFS--YADAM- 121 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--ECCTT-
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEE--ECccc-
Confidence 444444444443 57889999999 999999999999999999986 567765 35542
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
++ .. +.++||+|+++-... ....++..+.+.|||||+++++.+.
T Consensus 122 --------~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 122 --------DL----------PF-EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp --------SC----------CS-CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred --------cC----------CC-CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 10 11 256899999985432 2467889999999999999998754
No 73
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.74 E-value=3.3e-08 Score=87.06 Aligned_cols=75 Identities=15% Similarity=0.077 Sum_probs=55.8
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH------
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN------ 299 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------ 299 (327)
+|+++.+++.|++|++.+++. ++.+. .+|.. ++. ..+ ..++||+|++|....
T Consensus 71 vD~s~~~l~~a~~~~~~~~~~--~v~~~--~~d~~---------~~~--------~~~-~~~~~D~i~~~~~~~~~~~~~ 128 (214)
T 1yzh_A 71 IDIQKSVLSYALDKVLEVGVP--NIKLL--WVDGS---------DLT--------DYF-EDGEIDRLYLNFSDPWPKKRH 128 (214)
T ss_dssp EESCHHHHHHHHHHHHHHCCS--SEEEE--ECCSS---------CGG--------GTS-CTTCCSEEEEESCCCCCSGGG
T ss_pred EEcCHHHHHHHHHHHHHcCCC--CEEEE--eCCHH---------HHH--------hhc-CCCCCCEEEEECCCCccccch
Confidence 999999999999999999984 46664 45642 110 001 256899999997532
Q ss_pred -----HHHHHHHHHhhccCCCcEEEEee
Q 041970 300 -----PLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 300 -----vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
....++..+.++|+|||+++++.
T Consensus 129 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 129 EKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp GGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 23568889999999999998864
No 74
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.74 E-value=3.9e-08 Score=91.78 Aligned_cols=86 Identities=12% Similarity=0.031 Sum_probs=67.1
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
+++.+|||+|| +|+++.+++.|++|++.+++. +++++. .+|.. ++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~~---- 179 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID-DHVRSR--VCNML---------DT---- 179 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--ECCTT---------SC----
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CceEEE--ECChh---------cC----
Confidence 46789999999 999999999999999999987 567775 35542 00
Q ss_pred ccccccCCCCCCCeeEEEEcCChHH--HHHHHHHHhhccCCCcEEEEeec
Q 041970 276 SSHKIRGISETEEYDVVIANILLNP--LLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~v--L~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.+ +.++||+|+++-..+. ...++..+.++|||||++++...
T Consensus 180 ------~~-~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 180 ------PF-DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp ------CC-CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------CC-CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 11 2578999999854322 67788999999999999998764
No 75
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.74 E-value=6.9e-08 Score=89.90 Aligned_cols=95 Identities=11% Similarity=0.050 Sum_probs=71.7
Q ss_pred HHHHHHHHhh--hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCC
Q 041970 204 KLCLLLLRSL--IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPS 262 (327)
Q Consensus 204 ~lcLe~Le~~--~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~ 262 (327)
+..++.+.+. +.+|.+|||+|| +|+++.+++.|+++++.+++. +++++. .+|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~-- 150 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN-RSRQVL--LQGWE-- 150 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS-SCEEEE--ESCGG--
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-CceEEE--ECChH--
Confidence 3444444443 257889999999 999999999999999999886 567764 34431
Q ss_pred CccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 263 SMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 263 ~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.+ .++||+|+++-.. .....++..+.+.|||||+++++.+.
T Consensus 151 -------------------~~--~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 151 -------------------DF--AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp -------------------GC--CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -------------------HC--CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 12 3689999998543 34577889999999999999998764
No 76
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.73 E-value=3.6e-08 Score=88.28 Aligned_cols=99 Identities=11% Similarity=0.196 Sum_probs=73.5
Q ss_pred chhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041970 199 EHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTF 260 (327)
Q Consensus 199 ~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~ 260 (327)
+||.-...++++. ++++.+|||+|| +|+++.+++.|++|++.+++. ++.+. .+|..
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~--~~d~~ 79 (239)
T 1xxl_A 6 HHHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVE--NVRFQ--QGTAE 79 (239)
T ss_dssp CHHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCC--SEEEE--ECBTT
T ss_pred cCCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC--CeEEE--ecccc
Confidence 3555555555554 567899999999 999999999999999999875 46654 34431
Q ss_pred CCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeec
Q 041970 261 PSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 261 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ .. ..++||+|+++-..+ ....++..+.+.|||||++++...
T Consensus 80 ---------~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 80 ---------SL----------PF-PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp ---------BC----------CS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------cC----------CC-CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 11 11 257899999996543 246788899999999999998754
No 77
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.73 E-value=1e-08 Score=95.35 Aligned_cols=36 Identities=31% Similarity=0.475 Sum_probs=30.4
Q ss_pred CCCeeEEEEcCCh---H------HHHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILL---N------PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla---~------vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.++||+|+|+-.. + .+..++..+.++|+|||+|++.
T Consensus 175 ~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 5789999998765 2 4567899999999999999985
No 78
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.73 E-value=2.8e-08 Score=91.03 Aligned_cols=94 Identities=18% Similarity=0.223 Sum_probs=68.9
Q ss_pred HHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcccccc
Q 041970 208 LLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVD 269 (327)
Q Consensus 208 e~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~ 269 (327)
+++..+..++.+|||+|| +|+++.+++.|+++++.+++. .++++. .+|..
T Consensus 60 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~--------- 127 (285)
T 4htf_A 60 RVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVS-DNMQFI--HCAAQ--------- 127 (285)
T ss_dssp HHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCG-GGEEEE--ESCGG---------
T ss_pred HHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-cceEEE--EcCHH---------
Confidence 344444455779999999 999999999999999999985 467764 34541
Q ss_pred chhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeec
Q 041970 270 GIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ ... ..++||+|+++-..+ ....++..+.++|||||+++++..
T Consensus 128 ~~---------~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 128 DV---------ASH-LETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GT---------GGG-CSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Hh---------hhh-cCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 11 001 257899999986543 236788999999999999998753
No 79
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.73 E-value=2.3e-08 Score=89.86 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=64.5
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+++.+++.|++|++.+++. ++++. .+|. .++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~--~~d~---------~~~~-- 133 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE--NTTFC--HDRA---------ETFG-- 133 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEE--ESCH---------HHHT--
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CEEEE--eccH---------HHhc--
Confidence 46789999999 999999999999999999985 36664 3443 1110
Q ss_pred cccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 275 LSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
......++||+|+++...+ +..++..+.++|+|||++++.
T Consensus 134 ------~~~~~~~~fD~V~~~~~~~-~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 134 ------QRKDVRESYDIVTARAVAR-LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ------TCTTTTTCEEEEEEECCSC-HHHHHHHHGGGEEEEEEEEEE
T ss_pred ------ccccccCCccEEEEeccCC-HHHHHHHHHHhcCCCCEEEEE
Confidence 0000146899999998644 677889999999999999875
No 80
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.73 E-value=4.3e-08 Score=89.83 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=69.1
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+..++.+... ++.+|||+|| +|+++.+++.|++|++.+++ ++++. .+|..
T Consensus 109 ~~~~~~~~~~~--~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~--~~d~~---- 177 (286)
T 3m70_A 109 HGDVVDAAKII--SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL---NISTA--LYDIN---- 177 (286)
T ss_dssp CHHHHHHHHHS--CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEE--ECCGG----
T ss_pred HHHHHHHhhcc--CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC---ceEEE--Eeccc----
Confidence 34555666533 6889999999 99999999999999999987 35554 35541
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEee
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.....++||+|++|... ..+..++..+.++|+|||++++..
T Consensus 178 -----------------~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 178 -----------------AANIQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -----------------GCCCCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----------------cccccCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 11125789999999653 345678999999999999977654
No 81
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.72 E-value=2.9e-08 Score=83.54 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=74.9
Q ss_pred CCchhhHHHHHHHHHhhh--cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 197 TGEHATTKLCLLLLRSLI--KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 197 TG~H~TT~lcLe~Le~~~--~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
.|.++++....+++.+.+ .++.+|||+|| +|+++.+++.|++|++.|++. ++++. .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~--~ 89 (183)
T 2yxd_A 14 EGVPITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIK--NCQII--K 89 (183)
T ss_dssp TTBCCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCC--SEEEE--E
T ss_pred cCCCcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEE--E
Confidence 345677777777666654 46789999999 999999999999999999984 46664 3
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+|.. + .+ +.++||+|++|.. ..+..++..+.+. |||+++++..
T Consensus 90 ~d~~---------~-----------~~-~~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 90 GRAE---------D-----------VL-DKLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp SCHH---------H-----------HG-GGCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred CCcc---------c-----------cc-cCCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 4431 1 01 1368999999988 6667778888777 9999998753
No 82
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.72 E-value=1.1e-07 Score=82.29 Aligned_cols=85 Identities=20% Similarity=0.216 Sum_probs=64.7
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
+.++ +|||+|| +|+++.+++.|++|++.++. ++.+. .+|.. +.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~--~~d~~---------~~---- 88 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV---KITTV--QSNLA---------DF---- 88 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC---CEEEE--CCBTT---------TB----
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC---ceEEE--EcChh---------hc----
Confidence 4567 9999999 99999999999999998876 35553 34542 00
Q ss_pred ccccccCCCCCCCeeEEEEcCCh---HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 276 SSHKIRGISETEEYDVVIANILL---NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla---~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. +.++||+|+++... .....++..+.+.|+|||+++++...
T Consensus 89 ------~~-~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 89 ------DI-VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp ------SC-CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred ------CC-CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 11 24689999998542 45677889999999999999998653
No 83
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.72 E-value=7.6e-09 Score=89.40 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHHhhh---cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 200 HATTKLCLLLLRSLI---KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 200 H~TT~lcLe~Le~~~---~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
.|.|...++++.+.+ .++.+|||+|| +|+++.+++.|++|++.+++ ++++. .
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~--~ 85 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA---VVDWA--A 85 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------CC--H
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC---ceEEE--E
Confidence 377788888777776 57889999999 99999999999999999876 24432 3
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh---H--------------------------HHHHHHHH
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL---N--------------------------PLLQLADH 307 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla---~--------------------------vL~~L~p~ 307 (327)
+|.. +.... .....++||+|++|... . .+..++..
T Consensus 86 ~d~~---------~~~~~-------~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (215)
T 4dzr_A 86 ADGI---------EWLIE-------RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL 149 (215)
T ss_dssp HHHH---------HHHHH-------HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTC
T ss_pred cchH---------hhhhh-------hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH
Confidence 3321 11000 00013789999999642 1 12667788
Q ss_pred HhhccCCCcE-EEE
Q 041970 308 IVSYAKPGAV-VGI 320 (327)
Q Consensus 308 i~~~LkpGG~-LIl 320 (327)
+.++|||||+ +++
T Consensus 150 ~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 150 PPYVLARGRAGVFL 163 (215)
T ss_dssp CGGGBCSSSEEEEE
T ss_pred HHHHhcCCCeEEEE
Confidence 8999999999 444
No 84
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.72 E-value=6e-08 Score=88.37 Aligned_cols=90 Identities=23% Similarity=0.299 Sum_probs=68.2
Q ss_pred HhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccch
Q 041970 211 RSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGI 271 (327)
Q Consensus 211 e~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l 271 (327)
..++.++.+|||+|| +|+++.+++.|++|+..+++. .++.+. .+|.. +.
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~~ 126 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR-FKVFFR--AQDSY---------GR 126 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS-SEEEEE--ESCTT---------TS
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC-ccEEEE--ECCcc---------cc
Confidence 344577889999999 999999999999999988875 456664 35542 00
Q ss_pred hhhcccccccCCCCCCCeeEEEEcCCh-------HHHHHHHHHHhhccCCCcEEEEee
Q 041970 272 VEYLSSHKIRGISETEEYDVVIANILL-------NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~fDlVvANIla-------~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.....++||+|+++-.. .....++..+.+.|||||+++++.
T Consensus 127 ----------~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 127 ----------HMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp ----------CCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------ccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 11125689999998543 345678899999999999999874
No 85
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.72 E-value=1.6e-08 Score=90.48 Aligned_cols=104 Identities=17% Similarity=0.296 Sum_probs=73.2
Q ss_pred cCcccCCCchhhHHHHHHHHHhh--hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCc
Q 041970 191 PGLAFGTGEHATTKLCLLLLRSL--IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKK 249 (327)
Q Consensus 191 PG~AFGTG~H~TT~lcLe~Le~~--~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~ 249 (327)
....|+.|.+.+...+...+.+. ..++++|||+|| +|+++.+++.|++|++.+++. +
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~ 141 (235)
T 1jg1_A 64 EPLPIPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK--N 141 (235)
T ss_dssp SCEECSTTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC--S
T ss_pred CCcccCCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC--C
Confidence 34567777776555555544444 357889999999 999999999999999999885 3
Q ss_pred EEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 250 MKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 250 v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
+++. .+|.. . .+....+||+|+++..... +.+.+.+.|+|||+++++
T Consensus 142 v~~~--~~d~~--------~------------~~~~~~~fD~Ii~~~~~~~---~~~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 142 VHVI--LGDGS--------K------------GFPPKAPYDVIIVTAGAPK---IPEPLIEQLKIGGKLIIP 188 (235)
T ss_dssp EEEE--ESCGG--------G------------CCGGGCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEE
T ss_pred cEEE--ECCcc--------c------------CCCCCCCccEEEECCcHHH---HHHHHHHhcCCCcEEEEE
Confidence 6654 34421 0 1112346999999865432 234778999999999886
No 86
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.71 E-value=1.5e-08 Score=92.83 Aligned_cols=75 Identities=15% Similarity=0.229 Sum_probs=55.8
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLA 305 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~ 305 (327)
+|+++.+++.|++|++.+++. + +++. .+++ .++. ......++||+|+++..++ +..++
T Consensus 110 vD~s~~~~~~a~~~~~~~~l~-~-v~~~--~~d~---------~~~~--------~~~~~~~~fD~I~s~a~~~-~~~ll 167 (249)
T 3g89_A 110 VDATRKKVAFVERAIEVLGLK-G-ARAL--WGRA---------EVLA--------REAGHREAYARAVARAVAP-LCVLS 167 (249)
T ss_dssp EESCHHHHHHHHHHHHHHTCS-S-EEEE--ECCH---------HHHT--------TSTTTTTCEEEEEEESSCC-HHHHH
T ss_pred EECCHHHHHHHHHHHHHhCCC-c-eEEE--ECcH---------HHhh--------cccccCCCceEEEECCcCC-HHHHH
Confidence 999999999999999999986 3 6664 3553 1111 0000136899999998865 46788
Q ss_pred HHHhhccCCCcEEEE-ee
Q 041970 306 DHIVSYAKPGAVVGI-SG 322 (327)
Q Consensus 306 p~i~~~LkpGG~LIl-SG 322 (327)
..+.++|||||++++ .|
T Consensus 168 ~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 168 ELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp HHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHcCCCeEEEEEeC
Confidence 899999999998765 55
No 87
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.71 E-value=5e-08 Score=96.50 Aligned_cols=109 Identities=23% Similarity=0.326 Sum_probs=77.8
Q ss_pred ceeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCC
Q 041970 184 ATNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNI 245 (327)
Q Consensus 184 ~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv 245 (327)
...+.++|+..|-+....+.++.-.+++ +.++++|||+|| +|+++.|++.|++|++.|++
T Consensus 260 g~~f~~~~~~F~q~n~~~~e~l~~~~~~--~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl 337 (425)
T 2jjq_A 260 DVDYLIHPNSFFQTNSYQAVNLVRKVSE--LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNV 337 (425)
T ss_dssp TEEEEECTTSCCCSBHHHHHHHHHHHHH--HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CEEEEEccccccccCHHHHHHHHHHhhc--cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 4678899997666655555444444444 678899999999 99999999999999999998
Q ss_pred CCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHH-HHHHHHHhhccCCCcEEEEee
Q 041970 246 GPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL-LQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 246 ~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL-~~L~p~i~~~LkpGG~LIlSG 322 (327)
. +++. .+|+. + .. ..+||+|++|+...-+ ..++..+. .|+|||.+++|-
T Consensus 338 ~---v~~~--~~d~~---------~------------~~-~~~fD~Vv~dPPr~g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 338 D---AEFE--VASDR---------E------------VS-VKGFDTVIVDPPRAGLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp C---EEEE--ECCTT---------T------------CC-CTTCSEEEECCCTTCSCHHHHHHHH-HHCCSEEEEEES
T ss_pred c---EEEE--ECChH---------H------------cC-ccCCCEEEEcCCccchHHHHHHHHH-hcCCCcEEEEEC
Confidence 4 5654 45542 1 11 2279999999874322 22444443 489999999983
No 88
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.70 E-value=1.1e-08 Score=93.15 Aligned_cols=104 Identities=18% Similarity=0.253 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...|..|... .++++|||+|| +|+++.+++.|++|++.+|+. +++++. .+|..
T Consensus 48 ~~~~l~~l~~~-~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~--~gda~- 122 (242)
T 3r3h_A 48 QAQFMQMLIRL-TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE-HKIKLR--LGPAL- 122 (242)
T ss_dssp HHHHHHHHHHH-HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT-TTEEEE--ESCHH-
T ss_pred HHHHHHHHHhh-cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--EcCHH-
Confidence 34444444443 45789999999 999999999999999999997 578875 35541
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+.+... ..-...++||+|+++........++..+.++|+|||+|++..++
T Consensus 123 --------~~l~~~-----~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 123 --------DTLHSL-----LNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp --------HHHHHH-----HHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred --------HHHHHH-----hhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 111000 00000368999999988777788899999999999999998775
No 89
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.69 E-value=4.1e-08 Score=88.31 Aligned_cols=84 Identities=21% Similarity=0.344 Sum_probs=65.9
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
+.+|++|||+|| +|+++.+++.|++|++.+++. +++++. .+|.. +
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~-- 156 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD-DRVTIK--LKDIY---------E-- 156 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT-TTEEEE--CSCGG---------G--
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC-CceEEE--ECchh---------h--
Confidence 457889999999 999999999999999999986 567764 45542 0
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.+ +.++||+|++|+... ..++..+.+.|+|||++++...
T Consensus 157 ---------~~-~~~~~D~v~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 157 ---------GI-EEENVDHVILDLPQP--ERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp ---------CC-CCCSEEEEEECSSCG--GGGHHHHHHHEEEEEEEEEEES
T ss_pred ---------cc-CCCCcCEEEECCCCH--HHHHHHHHHHcCCCCEEEEEEC
Confidence 11 256799999997643 3567888999999999998753
No 90
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.69 E-value=3.1e-08 Score=89.38 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=65.6
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++.+|||+|| +|+++.+++.|+++++.+++. ++.+. .+|.. ++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--~v~~~--~~d~~---------~l----- 97 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQ--QVEYV--QGDAE---------QM----- 97 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEE--ECCC----------CC-----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEE--EecHH---------hC-----
Confidence 46789999999 999999999999999999875 46654 35541 10
Q ss_pred cccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEeec
Q 041970 277 SHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.+ +.++||+|++|-..+. ...++..+.+.|||||+|+++..
T Consensus 98 -----~~-~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 98 -----PF-TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp -----CS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CC-CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 11 2578999999965432 35788999999999999998743
No 91
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.68 E-value=8.7e-09 Score=90.42 Aligned_cols=93 Identities=16% Similarity=0.354 Sum_probs=67.8
Q ss_pred HHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCC---CcEEEEecCCCCCCCCcccc
Q 041970 209 LLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGP---KKMKLHLVPDRTFPSSMNER 267 (327)
Q Consensus 209 ~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~---~~v~v~~~~~d~~~~~~~g~ 267 (327)
.+.++++++.+|||+|| +|+++.+++.|++|++.+++.. +++.+. .+|..
T Consensus 23 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~d~~------- 93 (235)
T 3sm3_A 23 IIHNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFK--VENAS------- 93 (235)
T ss_dssp THHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEE--ECCTT-------
T ss_pred HHHHhCCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEE--Eeccc-------
Confidence 45555667788888888 9999999999999998887731 245554 34431
Q ss_pred ccchhhhcccccccCCCCCCCeeEEEEcCChH------HHHHHHHHHhhccCCCcEEEEeec
Q 041970 268 VDGIVEYLSSHKIRGISETEEYDVVIANILLN------PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 268 ~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ .. ..++||+|+++-... ....++..+.+.|||||+++++..
T Consensus 94 --~~----------~~-~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 94 --SL----------SF-HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp --SC----------CS-CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --cc----------CC-CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 00 11 257899999986533 233788999999999999999854
No 92
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.68 E-value=4.3e-08 Score=86.65 Aligned_cols=101 Identities=18% Similarity=0.241 Sum_probs=72.7
Q ss_pred HHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 206 CLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 206 cLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+..+.+. .++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|..
T Consensus 60 ~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~i~~~--~~d~~---- 131 (229)
T 2avd_A 60 LLANLARL-IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE-HKIDLR--LKPAL---- 131 (229)
T ss_dssp HHHHHHHH-TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT-TTEEEE--ESCHH----
T ss_pred HHHHHHHh-cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-CeEEEE--EcCHH----
Confidence 33444333 46779999999 999999999999999999986 567775 35531
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+..... ..-...++||+|+++........++..+.++|+|||++++..++
T Consensus 132 -----~~~~~~-----~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 132 -----ETLDEL-----LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp -----HHHHHH-----HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred -----HHHHHH-----HhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 111000 00000168999999988777778889999999999999997765
No 93
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.68 E-value=8e-08 Score=87.68 Aligned_cols=105 Identities=14% Similarity=0.252 Sum_probs=74.0
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...+..+.+. .++++|||+|| +|+++.+++.|++|++.+|+. +++++. .+|..
T Consensus 67 ~~~ll~~l~~~-~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~i~~~--~gda~- 141 (247)
T 1sui_A 67 EGQFLSMLLKL-INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD-HKIDFR--EGPAL- 141 (247)
T ss_dssp HHHHHHHHHHH-TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG-GGEEEE--ESCHH-
T ss_pred HHHHHHHHHHh-hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEE--ECCHH-
Confidence 33444444443 35679999999 999999999999999999985 678875 35541
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+.+.... .... ..++||+|+++........++..+.++|||||++++..++
T Consensus 142 --------~~l~~l~---~~~~-~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 142 --------PVLDEMI---KDEK-NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp --------HHHHHHH---HSGG-GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred --------HHHHHHH---hccC-CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 1110000 0000 1368999999987666778889999999999999987654
No 94
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.67 E-value=5.4e-08 Score=87.92 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=69.0
Q ss_pred hhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 200 HATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 200 H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
.......+++|.+...++.+|||+|| +|+++.+++.|++++. ++++. .+|..
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-------~~~~~--~~d~~- 103 (263)
T 3pfg_A 34 HREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP-------DAVLH--HGDMR- 103 (263)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT-------TSEEE--ECCTT-
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC-------CCEEE--ECChH-
Confidence 34456677778777777889999999 9999999999999853 24443 35542
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcC-Ch------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANI-LL------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANI-la------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.....++||+|+++. .. ..+..++..+.++|||||+|+++
T Consensus 104 --------------------~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 104 --------------------DFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp --------------------TCCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --------------------HCCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 111257899999985 22 34567889999999999999996
No 95
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.67 E-value=3.5e-08 Score=89.19 Aligned_cols=105 Identities=11% Similarity=0.171 Sum_probs=74.5
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...|..+... .++++|||+|| +|+++.+++.|++|++.+|+. +++++. .+|..
T Consensus 58 ~~~~l~~l~~~-~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~--~gda~- 132 (237)
T 3c3y_A 58 AGQLMSFVLKL-VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE-HKINFI--ESDAM- 132 (237)
T ss_dssp HHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEE--ESCHH-
T ss_pred HHHHHHHHHHh-hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--EcCHH-
Confidence 33444444443 35678999988 999999999999999999985 678875 35542
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+.+.... .... ..++||+|+++........++..+.++|+|||++++..++
T Consensus 133 --------~~l~~l~---~~~~-~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 133 --------LALDNLL---QGQE-SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp --------HHHHHHH---HSTT-CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred --------HHHHHHH---hccC-CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 1110000 0000 1368999999987777788899999999999999997654
No 96
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.67 E-value=6.4e-08 Score=85.40 Aligned_cols=93 Identities=13% Similarity=0.156 Sum_probs=67.7
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+...+++.....++.+|||+|| +|+++.+++.|++|+..++. ++.+. .+|..
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~---~~~~~--~~d~~---- 94 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL---KPRLA--CQDIS---- 94 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC---CCEEE--CCCGG----
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC---CeEEE--ecccc----
Confidence 33444555444346789999999 99999999999999988875 24553 34531
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcC-Ch------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANI-LL------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANI-la------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
+ ....++||+|+++- .. .....++..+.+.|+|||+++++
T Consensus 95 -----~------------~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 95 -----N------------LNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -----G------------CCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -----c------------CCccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 11136899999975 32 34677889999999999999985
No 97
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.67 E-value=5e-08 Score=87.48 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=69.2
Q ss_pred cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 215 KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 215 ~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
.++++|||+|| +|+++.+++.|++|++.+++. +++++. .+|.. +...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~v~~~--~~d~~---------~~~~ 126 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE-NKIFLK--LGSAL---------ETLQ 126 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEE--ESCHH---------HHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCEEEE--ECCHH---------HHHH
Confidence 46778888888 999999999999999999986 567765 34531 1100
Q ss_pred hcc----cccc-cCCCCC-CCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 274 YLS----SHKI-RGISET-EEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 274 ~~~----~~~~-~~~~~~-~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
... ...+ ..+... ++||+|+++.....+..++..+.+.|+|||++++..++
T Consensus 127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 000 0000 001101 68999999987777778899999999999999998643
No 98
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.65 E-value=1.2e-08 Score=92.11 Aligned_cols=56 Identities=18% Similarity=0.093 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHhhhc----CCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 201 ATTKLCLLLLRSLIK----GGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~----~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
|.|...++.+.+.+. ++.+|||+|| +|+++.+++.|++|++.|++. +++++. .
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~--~ 122 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS-DLIKVV--K 122 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEE--E
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC-ccEEEE--E
Confidence 444444444433332 5679999999 999999999999999999986 567775 3
Q ss_pred CCC
Q 041970 257 DRT 259 (327)
Q Consensus 257 ~d~ 259 (327)
+|.
T Consensus 123 ~d~ 125 (254)
T 2h00_A 123 VPQ 125 (254)
T ss_dssp CCT
T ss_pred cch
Confidence 553
No 99
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.65 E-value=6.1e-08 Score=87.06 Aligned_cols=102 Identities=21% Similarity=0.280 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
+...+..+... .++++|||+|| +|+++.+++.|++|++.+++. +++++. .++..
T Consensus 60 ~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~--~~d~~- 134 (232)
T 3cbg_A 60 QAQFLGLLISL-TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA-EKISLR--LGPAL- 134 (232)
T ss_dssp HHHHHHHHHHH-HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEE--ESCHH-
T ss_pred HHHHHHHHHHh-cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEE--EcCHH-
Confidence 44444444433 45779999999 999999999999999999986 577775 34431
Q ss_pred CCccccccchhhhcccccccCCCCC--CCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISET--EEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~--~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+.+... .. .. ++||+|+++........++..+.++|+|||++++..++
T Consensus 135 --------~~l~~l------~~-~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 135 --------ATLEQL------TQ-GKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp --------HHHHHH------HT-SSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred --------HHHHHH------Hh-cCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 111000 00 12 68999999987777788899999999999999997654
No 100
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.64 E-value=1.1e-07 Score=81.26 Aligned_cols=82 Identities=17% Similarity=0.273 Sum_probs=61.0
Q ss_pred CCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhccc
Q 041970 216 GGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSS 277 (327)
Q Consensus 216 ~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~ 277 (327)
++.+|||+|| +|+++.+++.|++|++.+++. ++++. .+|.. ++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~--~~d~~---------~~------ 92 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLD--NLHTR--VVDLN---------NL------ 92 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCT--TEEEE--ECCGG---------GC------
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCC--CcEEE--Ecchh---------hC------
Confidence 4557777777 999999999999999999874 36654 34531 10
Q ss_pred ccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEee
Q 041970 278 HKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 278 ~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.. .++||+|+++-..+ ....++..+.+.|+|||++++..
T Consensus 93 ----~~--~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 93 ----TF--DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ----CC--CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----CC--CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 11 56899999986432 45778899999999999977643
No 101
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.64 E-value=6.3e-08 Score=83.73 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=68.5
Q ss_pred HHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 205 LCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 205 lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
...++|.+++.++.+|||+|| +|+++.+++.|++|++.. .++.+. .+|..
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~----~~i~~~--~~d~~----- 99 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV----PQLRWE--TMDVR----- 99 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC----TTCEEE--ECCTT-----
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC----CCcEEE--Ecchh-----
Confidence 356677777788889999999 999999999999997641 245554 34542
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcCChH------------------HHHHHHHHHhhccCCCcEEEEeec
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANILLN------------------PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------------------vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ .+ ..++||+|++|...+ ....++..+.++|||||++++...
T Consensus 100 ----~~----------~~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 100 ----KL----------DF-PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp ----SC----------CS-CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ----cC----------CC-CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 00 11 246899999986543 235788899999999999998754
No 102
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.63 E-value=1.1e-07 Score=83.16 Aligned_cols=87 Identities=18% Similarity=0.285 Sum_probs=65.8
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..++.+|||+|| +|+++.+++.|++|++.+++. ++++. .+|.. ++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~--~~d~~---------~~- 100 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK--NVEVL--KSEEN---------KI- 100 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT--TEEEE--ECBTT---------BC-
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC--cEEEE--ecccc---------cC-
Confidence 356678888888 999999999999999999875 46664 34431 10
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEeecc
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. ..++||+|+++-.... ...++..+.+.|+|||+++++...
T Consensus 101 ---------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 101 ---------PL-PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp ---------SS-CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------CC-CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 11 2568999999865443 367888999999999999998643
No 103
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.63 E-value=2.7e-08 Score=87.96 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=68.0
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCC---CCCcEEEEecCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNI---GPKKMKLHLVPDR 258 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv---~~~~v~v~~~~~d 258 (327)
.+.+++++...++++.+|||+|| +|+++.+++.|++|++.+++ ..+++.+. .+|
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d 141 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV--VGD 141 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE--ESC
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEE--ECC
Confidence 34566666655778899999999 99999999999999998875 01356664 344
Q ss_pred CCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 259 TFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 259 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.. . .....++||+|+++..... +...+.+.|||||+++++
T Consensus 142 ~~---------~-----------~~~~~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 142 GR---------M-----------GYAEEAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILP 181 (226)
T ss_dssp GG---------G-----------CCGGGCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEE
T ss_pred cc---------c-----------CcccCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 31 0 0112467999999865432 346788999999999986
No 104
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.63 E-value=3.7e-07 Score=89.04 Aligned_cols=36 Identities=8% Similarity=0.008 Sum_probs=28.9
Q ss_pred CCCCcEEEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 69 VESPYLLVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 69 ~~m~w~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
+.|+|.++-+.|+...++.+.+-|.++|+..+.++.
T Consensus 2 ~~m~~~~~~at~~~GlE~~l~~El~~Lg~~~~~~~~ 37 (385)
T 3ldu_A 2 NAMKNYTLISPCFFGMEKMLAREITNLGYEIIKTED 37 (385)
T ss_dssp ---CCEEEEEECCTTCHHHHHHHHHHTTCEEEEEET
T ss_pred CCCCceEEEEECChhHHHHHHHHHHhcCCCceEEec
Confidence 568999999999999999999999999986665543
No 105
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.62 E-value=2.1e-08 Score=89.72 Aligned_cols=85 Identities=15% Similarity=0.285 Sum_probs=63.6
Q ss_pred hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 214 IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 214 ~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
+.++.+|||+|| +|+++.+++.|+++++.+ .++++. .+|.. ++
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~--~~d~~---------~~--- 114 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN----NKIIFE--ANDIL---------TK--- 114 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC----TTEEEE--ECCTT---------TC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC----CCeEEE--ECccc---------cC---
Confidence 356789999999 999999999999987655 346654 35542 00
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. +.++||+|+++-.. .....++..+.+.|||||+++++.+.
T Consensus 115 -------~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 115 -------EF-PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp -------CC-CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------CC-CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 11 25789999998543 34567889999999999999998753
No 106
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.62 E-value=1.6e-09 Score=96.84 Aligned_cols=100 Identities=17% Similarity=0.094 Sum_probs=63.6
Q ss_pred cCCCchhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 195 FGTGEHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 195 FGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
|........+..+..+... .++.+|||+|| +|+++.+++.|++|++.+++. +++++. .
T Consensus 58 ~~~~~~~~~~~l~~~~~~~-~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~--~ 133 (241)
T 3gdh_A 58 FSVTPEKIAEHIAGRVSQS-FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIA-DKIEFI--C 133 (241)
T ss_dssp HHCCCHHHHHHHHHHHHHH-SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEE--E
T ss_pred eecCHHHHHHHHHHHhhhc-cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC-cCeEEE--E
Confidence 4433344444445554433 37889999999 999999999999999999985 467764 3
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHH---HHHHHHHhhccCCCcEEE
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL---LQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL---~~L~p~i~~~LkpGG~LI 319 (327)
+|.. ++ ...++||+|++|...... ...+.++.++|+|||+++
T Consensus 134 ~d~~---------~~------------~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 134 GDFL---------LL------------ASFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp SCHH---------HH------------GGGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHH
T ss_pred CChH---------Hh------------cccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeH
Confidence 5541 11 125689999999753211 112234455555555543
No 107
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.62 E-value=7.5e-08 Score=93.07 Aligned_cols=95 Identities=19% Similarity=0.241 Sum_probs=66.0
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhc-----C-CCCCcEEEEecCCCCCCCCccc
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALN-----N-IGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lN-----g-v~~~~v~v~~~~~d~~~~~~~g 266 (327)
..+|.+|||+|| +|+++.+++.|++|++.+ | ....++++. .+|..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~--~~d~~------ 152 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFL--KGFIE------ 152 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEE--ESCTT------
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEE--EccHH------
Confidence 345667777777 999999999999999876 4 433456664 45542
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEeecc
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
++.. .....+ +.++||+|++|...+. ...++..+.++|||||+|+++.+.
T Consensus 153 ---~l~~----~~~~~~-~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 153 ---NLAT----AEPEGV-PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp ---CGGG----CBSCCC-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---Hhhh----cccCCC-CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 1100 000012 2578999999976543 467889999999999999998654
No 108
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.62 E-value=1.2e-07 Score=84.81 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=61.5
Q ss_pred hhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 213 LIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 213 ~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
...++.+|||+|| +|+++.+++.|++|++.++ .++++. .+|. .++.
T Consensus 57 ~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~--~~d~---------~~~~- 121 (236)
T 1zx0_A 57 ASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPL--KGLW---------EDVA- 121 (236)
T ss_dssp HTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEE--ESCH---------HHHG-
T ss_pred cCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEE--ecCH---------HHhh-
Confidence 3467889999999 9999999999999998876 246654 3553 1111
Q ss_pred hcccccccCCCCCCCeeEEEEcCC--------hHHHHHHHHHHhhccCCCcEEEEe
Q 041970 274 YLSSHKIRGISETEEYDVVIANIL--------LNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIl--------a~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
..+ +.++||+|++|.. ......++..+.++|||||+|++.
T Consensus 122 -------~~~-~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 122 -------PTL-PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp -------GGS-CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred -------ccc-CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 012 2578999999211 122346688999999999999865
No 109
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.62 E-value=1e-07 Score=90.16 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=72.6
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+..+++..+|. .++|++|||+|| +|+++.+++.+++|++.+|+. ++++. .+|.
T Consensus 105 ~~s~l~~~~l~--~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~--~v~~~--~~D~ 178 (315)
T 1ixk_A 105 ASSMYPPVALD--PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL--NVILF--HSSS 178 (315)
T ss_dssp HHHHHHHHHHC--CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC--SEEEE--SSCG
T ss_pred HHHHHHHHHhC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--eEEEE--ECCh
Confidence 55666666664 568899999999 999999999999999999985 36653 4554
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------------------HHHHHHHHHHhhccCC
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------------------NPLLQLADHIVSYAKP 314 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------------------~vL~~L~p~i~~~Lkp 314 (327)
. ++. . ..++||+|++|..- .....++..+.++|||
T Consensus 179 ~---------~~~---------~--~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 179 L---------HIG---------E--LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp G---------GGG---------G--GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred h---------hcc---------c--ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 110 1 14689999998531 1125788899999999
Q ss_pred CcEEEEeec
Q 041970 315 GAVVGISGI 323 (327)
Q Consensus 315 GG~LIlSGI 323 (327)
||+|++|..
T Consensus 239 GG~lv~stc 247 (315)
T 1ixk_A 239 GGILVYSTC 247 (315)
T ss_dssp EEEEEEEES
T ss_pred CCEEEEEeC
Confidence 999999753
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.62 E-value=1.4e-07 Score=100.42 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=84.9
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhc--CCCeeeeeee---------------------ecCCHHHHHHHHHHHHh-
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIK--GGELFLDYGT---------------------VDIDPQVIKSAHQNAAL- 242 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~--~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~l- 242 (327)
...+|.|++|+..+|.++..++++.+.+. ++.+|||+|| +|+++.+++.|+++++.
T Consensus 690 dea~p~me~gtFsPPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~ 769 (950)
T 3htx_A 690 GPSEERMEAAFFKPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVK 769 (950)
T ss_dssp CSCCCCCCCCCSSSCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHH
T ss_pred cchhhHHhhCcCCchHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhc
Confidence 34678999999999999999998888764 7889999999 99999999999997653
Q ss_pred -----cCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhcc
Q 041970 243 -----NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYA 312 (327)
Q Consensus 243 -----Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~L 312 (327)
+++ .++++. .+|+. ++ .. ..++||+|+++-..+ ....++..+.++|
T Consensus 770 lnAkr~gl--~nVefi--qGDa~---------dL----------p~-~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvL 825 (950)
T 3htx_A 770 LNKEACNV--KSATLY--DGSIL---------EF----------DS-RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLF 825 (950)
T ss_dssp TTTTCSSC--SEEEEE--ESCTT---------SC----------CT-TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTT
T ss_pred cchhhcCC--CceEEE--ECchH---------hC----------Cc-ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHc
Confidence 244 356664 46652 11 11 257899999985543 2345788999999
Q ss_pred CCCcEEEEee
Q 041970 313 KPGAVVGISG 322 (327)
Q Consensus 313 kpGG~LIlSG 322 (327)
||| .++++-
T Consensus 826 KPG-~LIIST 834 (950)
T 3htx_A 826 HPK-LLIVST 834 (950)
T ss_dssp CCS-EEEEEE
T ss_pred CCC-EEEEEe
Confidence 999 787764
No 111
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.60 E-value=6.9e-08 Score=86.26 Aligned_cols=84 Identities=18% Similarity=0.226 Sum_probs=62.8
Q ss_pred CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 216 GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 216 ~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
++.+|||+|| +|+++.+++.|++|+..++. .++++. .+|.. ++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~--~~d~~---------~~----- 140 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK--RVRNYF--CCGLQ---------DF----- 140 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG--GEEEEE--ECCGG---------GC-----
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC--ceEEEE--EcChh---------hc-----
Confidence 4789999999 99999999999999887752 345554 34431 11
Q ss_pred cccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 277 SHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.. ..++||+|+++-.. ..+..++..+.++|||||+++++..
T Consensus 141 -----~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 141 -----TP-EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp -----CC-CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CC-CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 11 24589999998542 2356789999999999999999754
No 112
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.60 E-value=6.5e-08 Score=93.68 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=71.2
Q ss_pred hHHHHHHHHHhh--hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041970 202 TTKLCLLLLRSL--IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTF 260 (327)
Q Consensus 202 TT~lcLe~Le~~--~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~ 260 (327)
.+....++|.+. ..++++|||+|| +|++ .+++.|++|++.|++. +++++. .+|..
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~-~~v~~~--~~d~~ 122 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLD-HIVEVI--EGSVE 122 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCT-TTEEEE--ESCGG
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCC-CeEEEE--ECchh
Confidence 344455555443 356789999999 9999 9999999999999997 678775 35541
Q ss_pred CCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh------HHHHHHHHHHhhccCCCcEEEEee
Q 041970 261 PSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 261 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
+ +...++||+|++|.+. ..+..++..+.++|||||+++++-
T Consensus 123 ---------~------------~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 123 ---------D------------ISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp ---------G------------CCCSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ---------h------------cCcCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 1 1113789999998743 235678888999999999998753
No 113
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.60 E-value=4.5e-08 Score=85.69 Aligned_cols=102 Identities=16% Similarity=0.218 Sum_probs=69.5
Q ss_pred cccCCCchhhHHHHHHHHHhh--hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCc
Q 041970 193 LAFGTGEHATTKLCLLLLRSL--IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKK 249 (327)
Q Consensus 193 ~AFGTG~H~TT~lcLe~Le~~--~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~ 249 (327)
+.+|.|.+-+.......+.+. ..++.+|||+|| +|+++.+++.|++|++.+++. +
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~ 129 (215)
T 2yxe_A 52 LEIGYGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD--N 129 (215)
T ss_dssp EEEETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT--T
T ss_pred ccCCCCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--C
Confidence 445555544433333333333 356789999999 899999999999999998875 3
Q ss_pred EEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 250 MKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 250 v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
+.+. .+|.. . .....++||+|+++...+.+ ...+.+.|||||+++++
T Consensus 130 v~~~--~~d~~--------~------------~~~~~~~fD~v~~~~~~~~~---~~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 130 VIVI--VGDGT--------L------------GYEPLAPYDRIYTTAAGPKI---PEPLIRQLKDGGKLLMP 176 (215)
T ss_dssp EEEE--ESCGG--------G------------CCGGGCCEEEEEESSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred eEEE--ECCcc--------c------------CCCCCCCeeEEEECCchHHH---HHHHHHHcCCCcEEEEE
Confidence 6654 34431 0 11114689999999654432 25788999999999886
No 114
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.60 E-value=2.9e-08 Score=87.85 Aligned_cols=101 Identities=21% Similarity=0.206 Sum_probs=67.5
Q ss_pred cccCCCchhhHHHHHHHHHhh--hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEE
Q 041970 193 LAFGTGEHATTKLCLLLLRSL--IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKL 252 (327)
Q Consensus 193 ~AFGTG~H~TT~lcLe~Le~~--~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v 252 (327)
+.+|.|.+-+....++.+.+. ..++.+|||+|| +|+++.+++.|++|++.++ ++++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~v~~ 120 (231)
T 1vbf_A 45 LPILPGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN----NIKL 120 (231)
T ss_dssp EEEETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS----SEEE
T ss_pred eeeCCCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC----CeEE
Confidence 334455443333333333333 357789999999 9999999999999998776 3555
Q ss_pred EecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 253 HLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 253 ~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
. .+|.. + .....++||+|+++-..+.+ .+.+.+.|+|||+++++-
T Consensus 121 ~--~~d~~---------~-----------~~~~~~~fD~v~~~~~~~~~---~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 121 I--LGDGT---------L-----------GYEEEKPYDRVVVWATAPTL---LCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp E--ESCGG---------G-----------CCGGGCCEEEEEESSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred E--ECCcc---------c-----------ccccCCCccEEEECCcHHHH---HHHHHHHcCCCcEEEEEE
Confidence 3 34531 0 01124689999998654432 357889999999999873
No 115
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.60 E-value=1.7e-07 Score=90.40 Aligned_cols=120 Identities=8% Similarity=-0.017 Sum_probs=76.5
Q ss_pred eeEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCC
Q 041970 185 TNIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIG 246 (327)
Q Consensus 185 ~~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~ 246 (327)
..+.+.|+..|-+-...+.++.-..++..-..|++|||+|| +|+++.|++.|++|++.||+.
T Consensus 182 ~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~ 261 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHID 261 (369)
T ss_dssp CEEEEETTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 56789999888877666555554444433334689999999 999999999999999999985
Q ss_pred CCcEEEEecCCCCCCCCccccccchhhhcccc------cccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEE
Q 041970 247 PKKMKLHLVPDRTFPSSMNERVDGIVEYLSSH------KIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 247 ~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~------~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIl 320 (327)
++++. .+|+. ++....... ....+ ...+||+|+.|+... .+.+.+.+.|+++|+++.
T Consensus 262 --~v~~~--~~d~~---------~~~~~~~~~~~~~~l~~~~~-~~~~fD~Vv~dPPr~---g~~~~~~~~l~~~g~ivy 324 (369)
T 3bt7_A 262 --NVQII--RMAAE---------EFTQAMNGVREFNRLQGIDL-KSYQCETIFVDPPRS---GLDSETEKMVQAYPRILY 324 (369)
T ss_dssp --SEEEE--CCCSH---------HHHHHHSSCCCCTTGGGSCG-GGCCEEEEEECCCTT---CCCHHHHHHHTTSSEEEE
T ss_pred --ceEEE--ECCHH---------HHHHHHhhcccccccccccc-ccCCCCEEEECcCcc---ccHHHHHHHHhCCCEEEE
Confidence 46664 46642 111100000 00000 013799999998754 123444555567777765
Q ss_pred e
Q 041970 321 S 321 (327)
Q Consensus 321 S 321 (327)
.
T Consensus 325 v 325 (369)
T 3bt7_A 325 I 325 (369)
T ss_dssp E
T ss_pred E
Confidence 4
No 116
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.60 E-value=2.2e-07 Score=91.67 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=79.7
Q ss_pred ceeEEEccCcccCCCchhhHHHHHHHHHhhh--cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhc
Q 041970 184 ATNIILNPGLAFGTGEHATTKLCLLLLRSLI--KGGELFLDYGT------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 184 ~~~I~idPG~AFGTG~H~TT~lcLe~Le~~~--~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lN 243 (327)
...+.++|+..|-+- .+.|...++++.+.+ .++.+|||+|| +|+++.|++.|++|++.|
T Consensus 253 g~~~~~~~~~f~q~n-~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~ 331 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVN-AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLN 331 (433)
T ss_dssp TEEEECCSSSCCCSB-HHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CEEEEECcccccccC-HHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 457889999766554 444555555554444 46789999999 999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 244 NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 244 gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++. ++++. .+|... ....+ .. ..++||+|++|+...-+..++..+.+ ++|++.+++|-
T Consensus 332 ~~~--~v~f~--~~d~~~-----~l~~~----------~~-~~~~fD~Vv~dPPr~g~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 332 GLQ--NVTFY--HENLEE-----DVTKQ----------PW-AKNGFDKVLLDPARAGAAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp TCC--SEEEE--ECCTTS-----CCSSS----------GG-GTTCCSEEEECCCTTCCHHHHHHHHH-HCCSEEEEEES
T ss_pred CCC--ceEEE--ECCHHH-----Hhhhh----------hh-hcCCCCEEEECCCCccHHHHHHHHHh-cCCCeEEEEEC
Confidence 985 47764 466520 00000 01 14579999999875433455555543 78999888874
No 117
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.59 E-value=2.6e-07 Score=82.53 Aligned_cols=81 Identities=20% Similarity=0.295 Sum_probs=61.0
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++.+|||+|| +|+++.+++.|++|++.++.. +.+. .+|.. +
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---v~~~--~~d~~---------~------ 99 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLK---IEFL--QGDVL---------E------ 99 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---CEEE--ESCGG---------G------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCc---eEEE--ECChh---------h------
Confidence 35679999999 999999999999999988763 4553 34531 1
Q ss_pred cccccCCCCCCCeeEEEEcCC------hHHHHHHHHHHhhccCCCcEEEEe
Q 041970 277 SHKIRGISETEEYDVVIANIL------LNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIl------a~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
....++||+|+++.. ...+..++..+.++|+|||+++++
T Consensus 100 ------~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 100 ------IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp ------CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------cccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 112468999998532 135677889999999999999874
No 118
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.58 E-value=1.6e-07 Score=93.35 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=63.4
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHH-------HhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNA-------ALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa-------~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
+++|++|||+|| ||+++.+++.|++|+ +.+|+...++++. .+|+.
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi--~GD~~------ 242 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE--RGDFL------ 242 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE--ECCTT------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE--ECccc------
Confidence 468899999999 999999999999875 4567643567764 57763
Q ss_pred cccchhhhcccccccCCC-CCCCeeEEEEcCC--hHHHHHHHHHHhhccCCCcEEEEee
Q 041970 267 RVDGIVEYLSSHKIRGIS-ETEEYDVVIANIL--LNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~-~~~~fDlVvANIl--a~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++. +. .-..||+|++|.. ...+...+..+.+.|||||+||++-
T Consensus 243 ---~lp----------~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 243 ---SEE----------WRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp ---SHH----------HHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred ---CCc----------cccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence 110 00 0136999999965 2344445567889999999999874
No 119
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.58 E-value=2e-07 Score=82.45 Aligned_cols=83 Identities=19% Similarity=0.217 Sum_probs=61.4
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+++.+++.|++++..++ ++++. .+|..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~--~~d~~-------------- 102 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYI--EADYS-------------- 102 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEE--ESCTT--------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEE--eCchh--------------
Confidence 45678888888 9999999999999986664 45654 35542
Q ss_pred cccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.....++||+|+++-..+ ....++..+.+.|||||+++++...
T Consensus 103 -------~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 103 -------KYDFEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp -------TCCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------ccCCCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 111137899999986543 2335889999999999999987643
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.57 E-value=2.1e-07 Score=88.84 Aligned_cols=90 Identities=20% Similarity=0.210 Sum_probs=66.6
Q ss_pred HHHHHHhh--hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 206 CLLLLRSL--IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 206 cLe~Le~~--~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
-.++|.+. ..++++|||+|| +|+++ +++.|++|++.|++. +++++. .+|..
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~-~~i~~~--~~d~~---- 123 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLE-DTITLI--KGKIE---- 123 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCT-TTEEEE--ESCTT----
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCC-CcEEEE--EeeHH----
Confidence 33455444 356789999999 99997 899999999999986 567775 45541
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCC------hHHHHHHHHHHhhccCCCcEEE
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANIL------LNPLLQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl------a~vL~~L~p~i~~~LkpGG~LI 319 (327)
++ .+ +.++||+|++|.+ ...+..++..+.++|||||+++
T Consensus 124 -----~~----------~~-~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 124 -----EV----------HL-PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -----TS----------CC-SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred -----Hh----------cC-CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 10 11 2468999999973 1345667888899999999998
No 121
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.56 E-value=1.6e-07 Score=84.71 Aligned_cols=86 Identities=13% Similarity=0.198 Sum_probs=62.3
Q ss_pred hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 214 IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 214 ~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
..+|.+|||||| ||++|.+++.|+++++.++.. +++. .++. .++..
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~---~~~~--~~~a---------~~~~~- 122 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHK---VIPL--KGLW---------EDVAP- 122 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSE---EEEE--ESCH---------HHHGG-
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCc---eEEE--eehH---------Hhhcc-
Confidence 367899999999 999999999999999887753 4443 3443 11110
Q ss_pred cccccccCCCCCCCeeEEEEcCC--------hHHHHHHHHHHhhccCCCcEEEEee
Q 041970 275 LSSHKIRGISETEEYDVVIANIL--------LNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIl--------a~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.. +.++||.|+.+.. ......++.++.++|||||+|++-.
T Consensus 123 -------~~-~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 123 -------TL-PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -------GS-CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -------cc-cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 12 3678999987643 1235667889999999999998753
No 122
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.56 E-value=3.9e-08 Score=90.09 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=60.9
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCC--CcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGP--KKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~--~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+++.+++.|++|+..++... .++.+. .++.. ++..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~d~~---------~~~~- 123 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE--EANWL---------TLDK- 123 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE--ECCGG---------GHHH-
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEe--ecChh---------hCcc-
Confidence 46789999999 9999999999999986554321 234432 24431 1100
Q ss_pred cccccccCCCCCCCeeEEEEc--CCh---------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 275 LSSHKIRGISETEEYDVVIAN--ILL---------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvAN--Ila---------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+...++||+|+++ .+. .....++..+.++|||||+|+++
T Consensus 124 -------~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 124 -------DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp -------HSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -------ccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 00125789999996 332 33677899999999999999986
No 123
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.56 E-value=1.2e-07 Score=94.86 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+.++++..+|. .++|++|||+|| +|+++.+++.+++|++++|+. ++.+. .+|.
T Consensus 92 ~ss~l~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~--nv~v~--~~Da 165 (456)
T 3m4x_A 92 PSAMIVGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS--NAIVT--NHAP 165 (456)
T ss_dssp TTTHHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS--SEEEE--CCCH
T ss_pred HHHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEE--eCCH
Confidence 45677777775 568999999999 999999999999999999986 36553 4553
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC-------------------------hHHHHHHHHHHhhccCC
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL-------------------------LNPLLQLADHIVSYAKP 314 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl-------------------------a~vL~~L~p~i~~~Lkp 314 (327)
. ++.. . ..++||+|++|.. +.....++..+.++|||
T Consensus 166 ~---------~l~~---------~-~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 166 A---------ELVP---------H-FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp H---------HHHH---------H-HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred H---------Hhhh---------h-ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 1110 0 1468999999975 12234788899999999
Q ss_pred CcEEEEee
Q 041970 315 GAVVGISG 322 (327)
Q Consensus 315 GG~LIlSG 322 (327)
||+|+.|-
T Consensus 227 GG~LvYsT 234 (456)
T 3m4x_A 227 KGQLIYST 234 (456)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999875
No 124
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.55 E-value=4.9e-08 Score=86.28 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=69.3
Q ss_pred hHHHHHHHHHhhhcCCCeeeeeee-------------------------ecCCHHHHHHHHHHHHhcCC---CCCcEEEE
Q 041970 202 TTKLCLLLLRSLIKGGELFLDYGT-------------------------VDIDPQVIKSAHQNAALNNI---GPKKMKLH 253 (327)
Q Consensus 202 TT~lcLe~Le~~~~~g~~VLDvGc-------------------------VDIDp~AV~~A~eNa~lNgv---~~~~v~v~ 253 (327)
+...++++|.+.++++.+|||+|| +|+++.+++.|++|++.+++ ...++++.
T Consensus 66 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 145 (227)
T 2pbf_A 66 MHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKII 145 (227)
T ss_dssp HHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEE
Confidence 455667777655678899999999 79999999999999999873 11356664
Q ss_pred ecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 254 LVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 254 ~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+|.. ..... .....++||+|+++..... +...+.+.|+|||+++++
T Consensus 146 --~~d~~--------~~~~~--------~~~~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 146 --HKNIY--------QVNEE--------EKKELGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp --ECCGG--------GCCHH--------HHHHHCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred --ECChH--------hcccc--------cCccCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 35542 00000 0011467999999976543 347788999999999886
No 125
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.55 E-value=1.3e-07 Score=82.50 Aligned_cols=79 Identities=22% Similarity=0.274 Sum_probs=58.5
Q ss_pred hhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 213 LIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 213 ~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.+.++.+|||+|| +|+++.+++.|++|+ ++. +. .++.. .
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~---~~----~~d~~---------~---- 96 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL---GRP---VR----TMLFH---------Q---- 96 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSC---CE----ECCGG---------G----
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc---CCc---eE----Eeeec---------c----
Confidence 3456778888888 999999999999997 232 11 23321 1
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEee
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
+...++||+|+++-.. .....++..+.+.|||||+++++-
T Consensus 97 --------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 97 --------LDAIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp --------CCCCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1136789999998643 255678999999999999999873
No 126
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.55 E-value=2.6e-07 Score=82.19 Aligned_cols=83 Identities=17% Similarity=0.199 Sum_probs=63.2
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.+|++|||+|| +|+++.+++.|++|++.+++. .++++. .+|.. +
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~--~~d~~---------~------ 151 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLG-KNVKFF--NVDFK---------D------ 151 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCC-TTEEEE--CSCTT---------T------
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC-CcEEEE--EcChh---------h------
Confidence 57889999999 999999999999999999885 456664 45542 0
Q ss_pred cccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 277 SHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.....++||+|++|.... ..++..+.+.|+|||++++.-
T Consensus 152 -----~~~~~~~~D~v~~~~~~~--~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 152 -----AEVPEGIFHAAFVDVREP--WHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp -----SCCCTTCBSEEEECSSCG--GGGHHHHHHHBCTTCEEEEEE
T ss_pred -----cccCCCcccEEEECCcCH--HHHHHHHHHHcCCCCEEEEEe
Confidence 110245799999997522 345677889999999998864
No 127
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.54 E-value=2.5e-07 Score=85.46 Aligned_cols=93 Identities=10% Similarity=0.036 Sum_probs=65.5
Q ss_pred HHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCC-CCcEEEEecCCCCCCCCcccc
Q 041970 207 LLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIG-PKKMKLHLVPDRTFPSSMNER 267 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~-~~~v~v~~~~~d~~~~~~~g~ 267 (327)
..+++.+..++.+|||+|| +|+++.+++.|++|+..+++. ..++++. .+|..
T Consensus 73 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~--~~d~~------- 143 (299)
T 3g2m_A 73 REFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLV--QGDMS------- 143 (299)
T ss_dssp HHHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEE--ECBTT-------
T ss_pred HHHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEE--eCchh-------
Confidence 3344444345569999999 999999999999999887641 0246654 35542
Q ss_pred ccchhhhcccccccCCCCCCCeeEEEEc-CC-----hHHHHHHHHHHhhccCCCcEEEEee
Q 041970 268 VDGIVEYLSSHKIRGISETEEYDVVIAN-IL-----LNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 268 ~~~l~~~~~~~~~~~~~~~~~fDlVvAN-Il-----a~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+...++||+|++. .. ...+..++..+.+.|||||+|+++-
T Consensus 144 --------------~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 144 --------------AFALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp --------------BCCCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------cCCcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 11125789998854 21 1246788999999999999999874
No 128
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.54 E-value=2.7e-07 Score=79.85 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=63.2
Q ss_pred hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 214 IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 214 ~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
..++.+|||+|| +|+++.+++.|++|++.++.. +.+. .+|.. ++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~--~~d~~---------~~--- 83 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFK---LNIS--KGDIR---------KL--- 83 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCC---CCEE--ECCTT---------SC---
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCc---eEEE--ECchh---------hC---
Confidence 356789999999 999999999999999887642 3443 34431 00
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.. +.++||+|+++-.. .....++..+.+.|||||+++++-.
T Consensus 84 -------~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 84 -------PF-KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp -------CS-CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------CC-CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 11 25689999997432 3457788999999999999998865
No 129
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.54 E-value=3.5e-07 Score=81.84 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=64.2
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCC---------------------------C
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGP---------------------------K 248 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~---------------------------~ 248 (327)
.+|++|||+|| +|+++.+++.|+++++.++... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 45679999999 9999999999999987654110 0
Q ss_pred cE-EEEecCCCCCCCCccccccchhhhcccccccCCC--CCCCeeEEEEcCChH-------HHHHHHHHHhhccCCCcEE
Q 041970 249 KM-KLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGIS--ETEEYDVVIANILLN-------PLLQLADHIVSYAKPGAVV 318 (327)
Q Consensus 249 ~v-~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~--~~~~fDlVvANIla~-------vL~~L~p~i~~~LkpGG~L 318 (327)
++ .+. .+|.. +. .... ..++||+|+++-..+ ....++..+.++|||||+|
T Consensus 135 ~v~~~~--~~d~~---------~~---------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l 194 (265)
T 2i62_A 135 AIKQVL--KCDVT---------QS---------QPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFL 194 (265)
T ss_dssp HEEEEE--ECCTT---------SS---------STTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEE
T ss_pred hheeEE--Eeeec---------cC---------CCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEE
Confidence 14 443 34542 00 0000 126899999987655 4667889999999999999
Q ss_pred EEeeccC
Q 041970 319 GISGILS 325 (327)
Q Consensus 319 IlSGIl~ 325 (327)
+++..+.
T Consensus 195 i~~~~~~ 201 (265)
T 2i62_A 195 VMVDALK 201 (265)
T ss_dssp EEEEESS
T ss_pred EEEecCC
Confidence 9987653
No 130
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.54 E-value=1.2e-07 Score=83.42 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=65.4
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+..++.+.++ .++.+|||+|| +|+++.+++.|++++.. ++++. .+|..
T Consensus 30 ~~~~~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~------~v~~~--~~d~~---- 96 (250)
T 2p7i_A 30 HPFMVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD------GITYI--HSRFE---- 96 (250)
T ss_dssp HHHHHHHHGGG-CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS------CEEEE--ESCGG----
T ss_pred HHHHHHHHHhh-cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC------CeEEE--EccHH----
Confidence 35556666554 36789999999 99999999999998643 35553 34431
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHh-hccCCCcEEEEee
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIV-SYAKPGAVVGISG 322 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~-~~LkpGG~LIlSG 322 (327)
+ ....++||+|+++-..+. ...++..+. ++|||||+++++.
T Consensus 97 -----~------------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 97 -----D------------AQLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -----G------------CCCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----H------------cCcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 1 113578999999865432 367888999 9999999999975
No 131
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.53 E-value=1.2e-07 Score=92.61 Aligned_cols=93 Identities=15% Similarity=0.226 Sum_probs=67.6
Q ss_pred HHHHHHHHh--hhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCC
Q 041970 204 KLCLLLLRS--LIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPS 262 (327)
Q Consensus 204 ~lcLe~Le~--~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~ 262 (327)
..--++|.+ ...+|++|||||| ||.++ +++.|++|++.||+. ++|++. .++.-
T Consensus 69 ~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~-~~i~~i--~~~~~-- 142 (376)
T 4hc4_A 69 DAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLE-DRVHVL--PGPVE-- 142 (376)
T ss_dssp HHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCT-TTEEEE--ESCTT--
T ss_pred HHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCC-ceEEEE--eeeee--
Confidence 333344543 2347899999999 99997 579999999999998 688875 45531
Q ss_pred CccccccchhhhcccccccCCCCCCCeeEEEEcCCh------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 263 SMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 263 ~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
+ +...++||+||++++. ..+..++....++|||||.+|-+
T Consensus 143 -------~------------~~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 143 -------T------------VELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp -------T------------CCCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred -------e------------ecCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 1 1225789999998753 24566777788999999998754
No 132
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.53 E-value=4e-07 Score=83.73 Aligned_cols=40 Identities=23% Similarity=0.402 Sum_probs=33.3
Q ss_pred CCCeeEEEEcCChHH-------HHHHHHHHhhccCCCcEEEEeeccC
Q 041970 286 TEEYDVVIANILLNP-------LLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 286 ~~~fDlVvANIla~v-------L~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
.++||+|++|-..+. ...++..+.++|||||+|++++.+.
T Consensus 172 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~ 218 (289)
T 2g72_A 172 PLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALE 218 (289)
T ss_dssp CSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEES
T ss_pred CCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 457999999976544 5678899999999999999998664
No 133
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.53 E-value=3.4e-07 Score=87.34 Aligned_cols=83 Identities=18% Similarity=0.161 Sum_probs=64.4
Q ss_pred cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 215 KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 215 ~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
+++.+|||+|| +|+|+.+++.|++|++.+|+. ++++. .+|.. ++.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~--~i~~~--~~D~~---------~~~- 267 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS--WIRFL--RADAR---------HLP- 267 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT--TCEEE--ECCGG---------GGG-
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC--ceEEE--eCChh---------hCc-
Confidence 56789999999 999999999999999999986 46664 45542 111
Q ss_pred hcccccccCCCCCCCeeEEEEcCCh-----------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 274 YLSSHKIRGISETEEYDVVIANILL-----------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla-----------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.....||+|++|+.. ..+..++..+.+.|+|||++++.
T Consensus 268 ----------~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 268 ----------RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp ----------GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ----------cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 113568999999763 22367888999999999998875
No 134
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.53 E-value=2.4e-07 Score=82.59 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=61.7
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
.++.+|||+|| +|+++.+++.|++|++.+ .++.+. .+|.. ++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~--~~d~~---------~~---- 152 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM----PVGKFI--LASME---------TA---- 152 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS----SEEEEE--ESCGG---------GC----
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC----CceEEE--EccHH---------HC----
Confidence 36789999999 999999999999998655 245554 34431 10
Q ss_pred ccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEee
Q 041970 276 SSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.. +.++||+|+++-.. .....++..+.++|||||+++++.
T Consensus 153 ------~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 153 ------TL-PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp ------CC-CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CC-CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 11 25689999998653 235678899999999999999875
No 135
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.52 E-value=1.6e-07 Score=92.23 Aligned_cols=85 Identities=16% Similarity=0.163 Sum_probs=64.3
Q ss_pred cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCc-EEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKK-MKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~-v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
++|.+|||++| +|+++.|++.+++|+++||++ ++ +++. .+|+. +++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-~~~v~v~--~~Da~---------~~l 118 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-EDRYEIH--GMEAN---------FFL 118 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEE--CSCHH---------HHH
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-CceEEEE--eCCHH---------HHH
Confidence 36889999999 999999999999999999997 45 7764 56642 221
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
. ... .++||+|+.|+.. ....+++.+.+.|++||+|+++
T Consensus 119 ~-------~~~--~~~fD~V~lDP~g-~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 119 R-------KEW--GFGFDYVDLDPFG-TPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp H-------SCC--SSCEEEEEECCSS-CCHHHHHHHHHHEEEEEEEEEE
T ss_pred H-------Hhh--CCCCcEEEECCCc-CHHHHHHHHHHHhCCCCEEEEE
Confidence 0 011 3579999999942 2245677788889999998876
No 136
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.52 E-value=1.9e-07 Score=84.69 Aligned_cols=84 Identities=21% Similarity=0.402 Sum_probs=64.4
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+++.+++.|++|+..+++. ++++. .+|.. ++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~--~~d~~---------~~--- 99 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK--NVKFL--QANIF---------SL--- 99 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEE--ECCGG---------GC---
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEE--Ecccc---------cC---
Confidence 56789999999 999999999999999999885 46654 34531 10
Q ss_pred cccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 275 LSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
.. +.++||+|+++-.... ...++..+.+.|||||++++.-
T Consensus 100 -------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 100 -------PF-EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp -------CS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------CC-CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 2578999999865432 3578889999999999999853
No 137
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.52 E-value=2.4e-07 Score=88.76 Aligned_cols=84 Identities=12% Similarity=0.211 Sum_probs=64.6
Q ss_pred hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 214 IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 214 ~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
+.++++|||+|| +|+++ +++.|++|++.|++. +++++. .+|.. ++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~-~~v~~~--~~d~~---------~~--- 127 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLD-HVVTII--KGKVE---------EV--- 127 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT-TTEEEE--ESCTT---------TC---
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCC-CcEEEE--ECcHH---------Hc---
Confidence 457889999999 99996 999999999999997 678775 45542 10
Q ss_pred cccccccCCCCCCCeeEEEEcCC------hHHHHHHHHHHhhccCCCcEEEEe
Q 041970 275 LSSHKIRGISETEEYDVVIANIL------LNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIl------a~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+ +.++||+|++|.+ ...+..++..+.++|||||+++.+
T Consensus 128 -------~~-~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 128 -------EL-PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp -------CC-SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred -------cC-CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 11 2478999999863 134667888899999999998743
No 138
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.52 E-value=1.7e-07 Score=82.98 Aligned_cols=93 Identities=17% Similarity=0.236 Sum_probs=69.3
Q ss_pred HHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 204 KLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 204 ~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
+..++++.+++.++.+|||+|| +|+++.+++.|++|+.. .++.+. .+|..
T Consensus 41 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~--~~d~~----- 108 (242)
T 3l8d_A 41 STIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG-----PDLSFI--KGDLS----- 108 (242)
T ss_dssp TTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB-----TTEEEE--ECBTT-----
T ss_pred HHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhccc-----CCceEE--Ecchh-----
Confidence 4567788888888999999999 99999999999988521 345554 34431
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeec
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ .. +.++||+|+++-..+ ....++..+.+.|+|||+++++..
T Consensus 109 ----~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 109 ----SL----------PF-ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp ----BC----------SS-CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----cC----------CC-CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 10 11 257899999986443 335788999999999999999863
No 139
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.51 E-value=2e-07 Score=85.57 Aligned_cols=96 Identities=15% Similarity=0.088 Sum_probs=63.6
Q ss_pred HHHHHhhh--cCCCeeeeeee------------------ecCCHHHHHHHHHHHHh----------cCC-----CCCcEE
Q 041970 207 LLLLRSLI--KGGELFLDYGT------------------VDIDPQVIKSAHQNAAL----------NNI-----GPKKMK 251 (327)
Q Consensus 207 Le~Le~~~--~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~l----------Ngv-----~~~~v~ 251 (327)
.+++..+. .++.+|||+|| ||+++.||+.|+++... ++. ...+++
T Consensus 57 ~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 136 (252)
T 2gb4_A 57 KKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSIS 136 (252)
T ss_dssp HHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEE
T ss_pred HHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceE
Confidence 34454443 46789999999 99999999999876532 110 013466
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+. .+|.. ++. ....++||+|+++-.. .....++..+.++|||||+|++..+
T Consensus 137 ~~--~~D~~---------~l~----------~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 137 LY--CCSIF---------DLP----------RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp EE--ESCTT---------TGG----------GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EE--ECccc---------cCC----------cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 64 46653 110 1112689999987432 2345678899999999999976654
No 140
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.51 E-value=1.9e-07 Score=88.02 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=73.1
Q ss_pred eEEEccCcccCCCc-hhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcC
Q 041970 186 NIILNPGLAFGTGE-HATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNN 244 (327)
Q Consensus 186 ~I~idPG~AFGTG~-H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNg 244 (327)
.+.+|..+-+-+.. ...+.+...........+++|||+|| ||||+.+++.|++|+...+
T Consensus 52 ~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~ 131 (294)
T 3adn_A 52 VMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHN 131 (294)
T ss_dssp EEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHH
T ss_pred EEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcc
Confidence 45566555444333 23344433322222245689999999 9999999999999987642
Q ss_pred ---CCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH-----H--HHHHHHHhhccCC
Q 041970 245 ---IGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP-----L--LQLADHIVSYAKP 314 (327)
Q Consensus 245 ---v~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v-----L--~~L~p~i~~~Lkp 314 (327)
+...++++. .+|.. +.+ . ...++||+|++|..... + ..+...+.++|+|
T Consensus 132 ~~~~~~~rv~~~--~~D~~---------~~l--------~--~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lkp 190 (294)
T 3adn_A 132 AGSYDDPRFKLV--IDDGV---------NFV--------N--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNP 190 (294)
T ss_dssp SSCTTCTTCCEE--CSCSC---------C-------------CCCCCEEEEEECC----------CCHHHHHHHHHTEEE
T ss_pred cccccCCceEEE--EChHH---------HHH--------h--hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCC
Confidence 333467765 46642 111 0 12568999999875321 2 5678899999999
Q ss_pred CcEEEEee
Q 041970 315 GAVVGISG 322 (327)
Q Consensus 315 GG~LIlSG 322 (327)
||+|++..
T Consensus 191 gG~lv~~~ 198 (294)
T 3adn_A 191 GGIFVAQN 198 (294)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEec
Confidence 99999864
No 141
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.51 E-value=2.4e-07 Score=93.04 Aligned_cols=93 Identities=19% Similarity=0.207 Sum_probs=66.5
Q ss_pred HHHHHHHHHhhh--cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLI--KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~--~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
|....+.+.+.+ .++++|||+|| +|+++ +++.|++|++.|++. +++++. .+|..
T Consensus 143 t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~-~~v~~~--~~d~~- 217 (480)
T 3b3j_A 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT-DRIVVI--PGKVE- 217 (480)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCT-TTEEEE--ESCTT-
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCC-CcEEEE--ECchh-
Confidence 333444444332 46789999999 99999 889999999999996 578775 45542
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEE
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIl 320 (327)
.+...++||+|++|.+.. .+...+..+.++|||||++++
T Consensus 218 --------------------~~~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 218 --------------------EVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp --------------------TCCCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred --------------------hCccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 111136899999997732 233445577899999999984
No 142
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.51 E-value=3.6e-07 Score=84.45 Aligned_cols=100 Identities=12% Similarity=0.159 Sum_probs=67.6
Q ss_pred HHHHHHhhh-cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhc-CCCCCcEEEEecCCCCCCC
Q 041970 206 CLLLLRSLI-KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALN-NIGPKKMKLHLVPDRTFPS 262 (327)
Q Consensus 206 cLe~Le~~~-~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lN-gv~~~~v~v~~~~~d~~~~ 262 (327)
..+.|.++. .++.+|||+|| +|+++.+++.|++|++.+ +.. .++++. .+|..
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~v~~~--~~d~~-- 99 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY-KNVSFK--ISSSD-- 99 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC-TTEEEE--ECCTT--
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC-CceEEE--EcCHH--
Confidence 445555553 46788999999 999999999999999987 433 467765 35542
Q ss_pred CccccccchhhhcccccccCCCCCCCeeEEEEcCChH--HHHHHHHHHhhccCCCcEEEEee
Q 041970 263 SMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN--PLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 263 ~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~--vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++... +...+ ..++||+|+++-..+ ....++..+.+.|||||+|++.+
T Consensus 100 -------~~~~~----~~~~~-~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 100 -------DFKFL----GADSV-DKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp -------CCGGG----CTTTT-TSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------hCCcc----ccccc-cCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 10000 00000 126899999996543 34567889999999999999844
No 143
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.50 E-value=2.8e-07 Score=80.58 Aligned_cols=87 Identities=8% Similarity=0.083 Sum_probs=61.4
Q ss_pred HHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 205 LCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 205 lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
..++.+. ..++.+|||+|| +|+++.+++.|++++. . ++++. .+|..
T Consensus 36 ~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~-----~~~~~--~~d~~------ 99 (220)
T 3hnr_A 36 DILEDVV--NKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-K-----EFSIT--EGDFL------ 99 (220)
T ss_dssp HHHHHHH--HTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-T-----TCCEE--SCCSS------
T ss_pred HHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-C-----ceEEE--eCChh------
Confidence 3444443 247789999999 9999999999999865 2 23443 45542
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcCChHH-----HHHHHHHHhhccCCCcEEEEee
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANILLNP-----LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v-----L~~L~p~i~~~LkpGG~LIlSG 322 (327)
+ ....++||+|++|-..+. ...++..+.+.|||||+++++.
T Consensus 100 ---~------------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 100 ---S------------FEVPTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ---S------------CCCCSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ---h------------cCCCCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 111278999999865432 2347889999999999999985
No 144
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.50 E-value=2.1e-07 Score=85.45 Aligned_cols=71 Identities=28% Similarity=0.300 Sum_probs=54.3
Q ss_pred ecCCHHHHHHHHHHHHhc-CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHH
Q 041970 226 VDIDPQVIKSAHQNAALN-NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQL 304 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lN-gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L 304 (327)
+|+++.+++.|++|++.+ |.. ++++. .+|.. + .+ +.++||+|++|+... ..+
T Consensus 141 vD~s~~~~~~a~~~~~~~~g~~--~v~~~--~~d~~---------~-----------~~-~~~~fD~Vi~~~~~~--~~~ 193 (275)
T 1yb2_A 141 VERDEDNLKKAMDNLSEFYDIG--NVRTS--RSDIA---------D-----------FI-SDQMYDAVIADIPDP--WNH 193 (275)
T ss_dssp ECSCHHHHHHHHHHHHTTSCCT--TEEEE--CSCTT---------T-----------CC-CSCCEEEEEECCSCG--GGS
T ss_pred EECCHHHHHHHHHHHHhcCCCC--cEEEE--ECchh---------c-----------cC-cCCCccEEEEcCcCH--HHH
Confidence 899999999999999998 853 56664 45542 0 11 246899999987532 457
Q ss_pred HHHHhhccCCCcEEEEeec
Q 041970 305 ADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 305 ~p~i~~~LkpGG~LIlSGI 323 (327)
+..+.+.|||||+++++..
T Consensus 194 l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 194 VQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp HHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHcCCCCEEEEEeC
Confidence 7888999999999998763
No 145
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.49 E-value=2.6e-07 Score=82.60 Aligned_cols=94 Identities=17% Similarity=0.176 Sum_probs=66.3
Q ss_pred HHHHHHHHHh---hhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRS---LIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~---~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
.+..++.+.+ .+.++.+|||+|| +|+++.+++.|++|+ .++. .++.+. .+|..
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~--~~~~~~--~~d~~- 96 (263)
T 2yqz_A 23 AGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVD--RKVQVV--QADAR- 96 (263)
T ss_dssp HHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSC--TTEEEE--ESCTT-
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccC--CceEEE--Ecccc-
Confidence 3444555532 3467789999999 999999999999998 3332 346664 34431
Q ss_pred CCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEe
Q 041970 262 SSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlS 321 (327)
++ .+ +.++||+|+++-..+. ...++..+.+.|||||+++++
T Consensus 97 --------~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 97 --------AI----------PL-PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --------SC----------CS-CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------cC----------CC-CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 00 11 2568999999865433 367888999999999999986
No 146
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.49 E-value=4.7e-07 Score=85.27 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=60.9
Q ss_pred CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCC----cEEEEecCCCCCCCCccccccchh
Q 041970 216 GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPK----KMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 216 ~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~----~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
+|.+|||+|| +|+++.+|+.|++.+...+.... .+++. ..+.. .+....++.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~--~~d~~---~d~~~~~l~ 122 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYI--QETIR---SDTFVSSVR 122 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEE--ECCTT---SSSHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchh--hhhcc---cchhhhhhh
Confidence 3789999999 99999999999998876654210 13332 23321 000000110
Q ss_pred hhcccccccCCCCCCCeeEEEEcCCh------HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILL------NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla------~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
... +.++||+|+|+... .....++..++++|||||+|+++-+
T Consensus 123 --------~~~-~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 123 --------EVF-YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp --------TTC-CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------ccc-cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 011 25689999987532 2346889999999999999998753
No 147
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.49 E-value=4.7e-06 Score=81.55 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=47.3
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------- 298 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------- 298 (327)
+|+|+.|++.|++|++.||+. +++++. .+|.. + .....+||+|++|+..
T Consensus 269 vDid~~al~~Ar~Na~~~gl~-~~I~~~--~~D~~---------~------------~~~~~~fD~Iv~NPPYg~rl~~~ 324 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLG-DLITFR--QLQVA---------D------------FQTEDEYGVVVANPPYGERLEDE 324 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCT-TCSEEE--ECCGG---------G------------CCCCCCSCEEEECCCCCCSHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCC-CceEEE--ECChH---------h------------CCCCCCCCEEEECCCCccccCCc
Confidence 599999999999999999997 567764 45542 1 1124589999999874
Q ss_pred HHHHHHHHHHhhccCC--CcEE
Q 041970 299 NPLLQLADHIVSYAKP--GAVV 318 (327)
Q Consensus 299 ~vL~~L~p~i~~~Lkp--GG~L 318 (327)
..+..+...+.+.||+ ||.+
T Consensus 325 ~~l~~ly~~lg~~lk~~~g~~~ 346 (393)
T 3k0b_A 325 EAVRQLYREMGIVYKRMPTWSV 346 (393)
T ss_dssp HHHHHHHHHHHHHHHTCTTCEE
T ss_pred hhHHHHHHHHHHHHhcCCCCEE
Confidence 3344455555555544 6654
No 148
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.48 E-value=2.6e-07 Score=78.24 Aligned_cols=86 Identities=17% Similarity=0.202 Sum_probs=61.7
Q ss_pred HHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcccccc
Q 041970 208 LLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVD 269 (327)
Q Consensus 208 e~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~ 269 (327)
++++.++.++.+|||+|| +|+++.+++.|++|+. ++.+. .+|..
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~-------~~~~~--~~d~~--------- 99 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP-------EARWV--VGDLS--------- 99 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TSEEE--ECCTT---------
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC-------CCcEE--Ecccc---------
Confidence 455666778889999998 9999999999999862 23443 34432
Q ss_pred chhhhcccccccCCCCCCCeeEEEEc-CCh-----HHHHHHHHHHhhccCCCcEEEEee
Q 041970 270 GIVEYLSSHKIRGISETEEYDVVIAN-ILL-----NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~fDlVvAN-Ila-----~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++ .. +.++||+|++| -.. .....++..+.+.|+|||+++++-
T Consensus 100 ~~----------~~-~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 100 VD----------QI-SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp TS----------CC-CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC----------CC-CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 00 11 24689999998 222 345778899999999999999853
No 149
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.48 E-value=4.9e-07 Score=84.19 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=61.5
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCC-----CCCcEEEEecCCCCCCCCccccccc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNI-----GPKKMKLHLVPDRTFPSSMNERVDG 270 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv-----~~~~v~v~~~~~d~~~~~~~g~~~~ 270 (327)
.++.+|||+|| +|+++.+++.|+++...++. ...++.+. .+|... ..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~--~~D~~~-------~~ 103 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFI--TADSSK-------EL 103 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEE--ECCTTT-------SC
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEE--Eecccc-------cc
Confidence 36789999999 99999999999999876531 11245554 455420 00
Q ss_pred hhhhcccccccCCC-CCCCeeEEEEcCChH-------HHHHHHHHHhhccCCCcEEEEee
Q 041970 271 IVEYLSSHKIRGIS-ETEEYDVVIANILLN-------PLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 271 l~~~~~~~~~~~~~-~~~~fDlVvANIla~-------vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
+. ..+. ..++||+|++|...+ ....++..+.+.|||||+++++-
T Consensus 104 ~~--------~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 104 LI--------DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp ST--------TTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hh--------hhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 00 0011 135899999986542 24678899999999999999874
No 150
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.48 E-value=1.7e-07 Score=81.40 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=65.4
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+..++.+.. ..++.+|||+|| +|+++.+++.|++ ++.. ++++. .+|..
T Consensus 34 ~~~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~~--~~~~~--~~d~~---- 100 (218)
T 3ou2_A 34 APAALERLRA-GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGLD--NVEFR--QQDLF---- 100 (218)
T ss_dssp HHHHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCCT--TEEEE--ECCTT----
T ss_pred HHHHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCCC--CeEEE--ecccc----
Confidence 3445555543 356679999999 9999999999988 4443 46654 35542
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeec
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.....++||+|+++-..+ .+..++..+.+.|+|||+++++..
T Consensus 101 -----------------~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 101 -----------------DWTPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp -----------------SCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----------------cCCCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 111367899999986432 257788999999999999999864
No 151
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.48 E-value=2.4e-07 Score=81.45 Aligned_cols=96 Identities=6% Similarity=0.003 Sum_probs=62.7
Q ss_pred HHHHHHHhh-hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCC----------CCCcEEEEec
Q 041970 205 LCLLLLRSL-IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNI----------GPKKMKLHLV 255 (327)
Q Consensus 205 lcLe~Le~~-~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv----------~~~~v~v~~~ 255 (327)
...++++++ +.++.+|||+|| +|+++.|++.|+++++.+.. ...++++.
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~-- 87 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW-- 87 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE--
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE--
Confidence 344555554 357889999999 99999999999988654210 01235554
Q ss_pred CCCCCCCCccccccchhhhcccccccCCCCC-CCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEee
Q 041970 256 PDRTFPSSMNERVDGIVEYLSSHKIRGISET-EEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 256 ~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~-~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+|.. ++ .. .. ++||+|+++... .....++..+.++|||||++++..
T Consensus 88 ~~d~~---------~l----------~~-~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 88 CGDFF---------AL----------TA-RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp EECCS---------SS----------TH-HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ECccc---------cC----------Cc-ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 34542 11 00 12 589999987533 233457889999999999855544
No 152
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.48 E-value=1.9e-07 Score=83.20 Aligned_cols=85 Identities=18% Similarity=0.153 Sum_probs=58.2
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
+++|.+|||+|| +|+++.+++.++++++... ++.+. .+|.. ....
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~----~v~~~--~~d~~---------~~~~ 119 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN----NIIPL--LFDAS---------KPWK 119 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS----SEEEE--CSCTT---------CGGG
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC----CeEEE--EcCCC---------Cchh
Confidence 457788999999 9999999988888776531 24443 34541 0000
Q ss_pred hcccccccCCCCCCCeeEEEEcCChHH-HHHHHHHHhhccCCCcEEEEe
Q 041970 274 YLSSHKIRGISETEEYDVVIANILLNP-LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla~v-L~~L~p~i~~~LkpGG~LIlS 321 (327)
.... .++||+|++|+.... ...++..+.++|||||+|+++
T Consensus 120 ------~~~~--~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 120 ------YSGI--VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ------TTTT--CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------hccc--ccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 0011 368999999975432 334578999999999999987
No 153
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.48 E-value=2.4e-07 Score=86.95 Aligned_cols=86 Identities=15% Similarity=0.121 Sum_probs=61.7
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh--cCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL--NNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l--Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| +|+|+.+++.|++|+.. +++...++++. .+|.. +.+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~--~~D~~---------~~l 157 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV--IANGA---------EYV 157 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHH---------HHG
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHH---------HHH
Confidence 35689999999 99999999999999865 44533567775 35531 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChH-H-------HHHHHHHHhhccCCCcEEEEe
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLN-P-------LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~-v-------L~~L~p~i~~~LkpGG~LIlS 321 (327)
. . ..++||+|++|.... . ...++..+.++|+|||+|++.
T Consensus 158 ~--------~--~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 158 R--------K--FKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp G--------G--CSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred h--------h--CCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 0 1 146899999997533 1 157788999999999999986
No 154
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.47 E-value=3.6e-07 Score=84.09 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=62.8
Q ss_pred cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 215 KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 215 ~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
.++.+|||+|| +|+++.+++.|++|+..++. ++++. .+|.. +
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~v~~~--~~d~~---------~--- 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY---DSEFL--EGDAT---------E--- 83 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS---EEEEE--ESCTT---------T---
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC---ceEEE--Ecchh---------h---
Confidence 46789999999 99999999999999988764 46654 35542 1
Q ss_pred hcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 274 YLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
....++||+|+++-.... ...++..+.+.|||||++++.-
T Consensus 84 ---------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 84 ---------IELNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp ---------CCCSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------cCcCCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 111468999999876433 3578889999999999999764
No 155
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.47 E-value=8.2e-08 Score=88.70 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=67.5
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFP 261 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~ 261 (327)
.++...+|. .++|++|||+|| +|+++.+++.+++|++.+|+. ++++. .+|..
T Consensus 72 s~l~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~--~v~~~--~~D~~- 144 (274)
T 3ajd_A 72 SMIPPIVLN--PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL--NTIII--NADMR- 144 (274)
T ss_dssp GGHHHHHHC--CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEE--ESCHH-
T ss_pred HHHHHHHhC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC--cEEEE--eCChH-
Confidence 344444443 356778888888 999999999999999999985 46654 34531
Q ss_pred CCccccccchhhhcccccccCC-CCCCCeeEEEEcCCh---------------------HHHHHHHHHHhhccCCCcEEE
Q 041970 262 SSMNERVDGIVEYLSSHKIRGI-SETEEYDVVIANILL---------------------NPLLQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 262 ~~~~g~~~~l~~~~~~~~~~~~-~~~~~fDlVvANIla---------------------~vL~~L~p~i~~~LkpGG~LI 319 (327)
++.. .. ...++||+|++|..- .....++..+.++|||||+|+
T Consensus 145 --------~~~~--------~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 208 (274)
T 3ajd_A 145 --------KYKD--------YLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELV 208 (274)
T ss_dssp --------HHHH--------HHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEE
T ss_pred --------hcch--------hhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 1110 00 014689999999432 233678888999999999999
Q ss_pred Eee
Q 041970 320 ISG 322 (327)
Q Consensus 320 lSG 322 (327)
+|-
T Consensus 209 ~st 211 (274)
T 3ajd_A 209 YST 211 (274)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 156
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.47 E-value=3.5e-07 Score=81.18 Aligned_cols=75 Identities=15% Similarity=0.080 Sum_probs=54.9
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH------
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN------ 299 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------ 299 (327)
+|+++.+++.|++|++.+++. ++++. .+|+. ++.. .+ +.+.||.|++|....
T Consensus 68 iD~s~~~l~~a~~~~~~~~~~--nv~~~--~~d~~---------~l~~--------~~-~~~~~d~v~~~~~~p~~~~~~ 125 (213)
T 2fca_A 68 IELFKSVIVTAVQKVKDSEAQ--NVKLL--NIDAD---------TLTD--------VF-EPGEVKRVYLNFSDPWPKKRH 125 (213)
T ss_dssp ECSCHHHHHHHHHHHHHSCCS--SEEEE--CCCGG---------GHHH--------HC-CTTSCCEEEEESCCCCCSGGG
T ss_pred EEechHHHHHHHHHHHHcCCC--CEEEE--eCCHH---------HHHh--------hc-CcCCcCEEEEECCCCCcCccc
Confidence 999999999999999999985 46664 56642 1110 02 256799999985321
Q ss_pred -----HHHHHHHHHhhccCCCcEEEEee
Q 041970 300 -----PLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 300 -----vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
....++..+.++|||||.|+++.
T Consensus 126 ~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 126 EKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp GGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred cccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 13567889999999999999864
No 157
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.47 E-value=2.3e-07 Score=83.17 Aligned_cols=76 Identities=9% Similarity=0.143 Sum_probs=54.2
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NP 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~v 300 (327)
+|+++.+++.|++|++.+++. ++++. .+|+. +++. ..+ +.+.||.|++|... ..
T Consensus 64 iD~s~~~l~~a~~~~~~~~l~--nv~~~--~~Da~---------~~l~-------~~~-~~~~~d~v~~~~~~p~~~~~~ 122 (218)
T 3dxy_A 64 IEVHSPGVGACLASAHEEGLS--NLRVM--CHDAV---------EVLH-------KMI-PDNSLRMVQLFFPDPWHKARH 122 (218)
T ss_dssp ECSCHHHHHHHHHHHHHTTCS--SEEEE--CSCHH---------HHHH-------HHS-CTTCEEEEEEESCCCCCSGGG
T ss_pred EEecHHHHHHHHHHHHHhCCC--cEEEE--ECCHH---------HHHH-------HHc-CCCChheEEEeCCCCccchhh
Confidence 899999999999999999986 36664 45541 1110 001 26789999998321 11
Q ss_pred H------HHHHHHHhhccCCCcEEEEee
Q 041970 301 L------LQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 301 L------~~L~p~i~~~LkpGG~LIlSG 322 (327)
. ..++..+.++|||||+|+++-
T Consensus 123 ~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 123 NKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp GGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 1 247889999999999999864
No 158
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.47 E-value=2.7e-07 Score=87.85 Aligned_cols=86 Identities=21% Similarity=0.240 Sum_probs=63.3
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh--cCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL--NNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l--Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| +|+|+.+++.|++|+.. |+++..++++. .+|.. +.+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~--~~D~~---------~~l 183 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDAS---------KFL 183 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHH---------HHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--EccHH---------HHH
Confidence 45689999999 99999999999999876 45533567775 35531 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCC-----hHHH--HHHHHHHhhccCCCcEEEEe
Q 041970 273 EYLSSHKIRGISETEEYDVVIANIL-----LNPL--LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIl-----a~vL--~~L~p~i~~~LkpGG~LIlS 321 (327)
. . ..++||+|++|.. ...+ ..++..+.++|+|||++++.
T Consensus 184 ~--------~--~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 184 E--------N--VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp H--------H--CCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred h--------h--cCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 0 0 1468999999974 1222 67888999999999999984
No 159
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.47 E-value=3.2e-07 Score=84.11 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=63.6
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
+.+|.+|||+|| +|+++.+++.|++|++.+++. +++++. .+|.. +
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~-- 175 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI-ERVTIK--VRDIS---------E-- 175 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG-GGEEEE--CCCGG---------G--
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-CCEEEE--ECCHH---------H--
Confidence 456788999999 999999999999999999885 467764 45542 0
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+ +.++||+|++|+... ..++..+.+.|+|||++++.-
T Consensus 176 ---------~~-~~~~~D~V~~~~~~~--~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 176 ---------GF-DEKDVDALFLDVPDP--WNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ---------CC-SCCSEEEEEECCSCG--GGTHHHHHHHEEEEEEEEEEE
T ss_pred ---------cc-cCCccCEEEECCcCH--HHHHHHHHHHcCCCCEEEEEe
Confidence 11 246899999997532 356778889999999998864
No 160
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.47 E-value=6.8e-07 Score=88.88 Aligned_cols=91 Identities=18% Similarity=0.312 Sum_probs=64.5
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHH-------HHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSA-------HQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A-------~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
+++|++|||+|| +|+++.+++.| ++|++.+|+...++++. .++.+ ..+
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i--~gD~~---~~~ 314 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS--LKKSF---VDN 314 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE--ESSCS---TTC
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE--EcCcc---ccc
Confidence 467899999999 99999999999 99999999532457764 33321 000
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcCC--hHHHHHHHHHHhhccCCCcEEEEee
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANIL--LNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl--a~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
. .+. . ..++||+|++|.. ...+...+..+.+.|||||+++++.
T Consensus 315 ~--~~~---------~--~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 315 N--RVA---------E--LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp H--HHH---------H--HGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred c--ccc---------c--ccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 0 000 0 0357999999832 2455666789999999999999873
No 161
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.46 E-value=3.8e-07 Score=79.35 Aligned_cols=91 Identities=16% Similarity=0.209 Sum_probs=66.8
Q ss_pred HHHHHHHHhhhcCCCeeeeeee----------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcccc
Q 041970 204 KLCLLLLRSLIKGGELFLDYGT----------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNER 267 (327)
Q Consensus 204 ~lcLe~Le~~~~~g~~VLDvGc----------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~ 267 (327)
+...++|.++..++.+|||+|| +|+++.+++.|++|+ . ++.+. .+|..
T Consensus 24 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~--~-----~~~~~--~~d~~------- 87 (211)
T 2gs9_A 24 AEEERALKGLLPPGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRA--P-----EATWV--RAWGE------- 87 (211)
T ss_dssp HHHHHHHHTTCCCCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHC--T-----TSEEE--CCCTT-------
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhC--C-----CcEEE--Ecccc-------
Confidence 4455677777778889999999 899999999999986 2 23443 34431
Q ss_pred ccchhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeec
Q 041970 268 VDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 268 ~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ .. +.++||+|+++-..+ ....++..+.+.|||||+++++..
T Consensus 88 --~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 88 --AL----------PF-PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp --SC----------CS-CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --cC----------CC-CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 00 11 256899999986433 246788899999999999999864
No 162
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.45 E-value=3.1e-07 Score=82.27 Aligned_cols=88 Identities=17% Similarity=0.317 Sum_probs=63.4
Q ss_pred HHHHHhhhc--CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 207 LLLLRSLIK--GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 207 Le~Le~~~~--~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
...+.+++. ++.+|||+|| +|+++.+++.|++++. . .++++. .+|..
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~-~~~~~~--~~d~~----- 100 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----S-PVVCYE--QKAIE----- 100 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----C-TTEEEE--ECCGG-----
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----c-CCeEEE--Ecchh-----
Confidence 334444443 6788999999 9999999999999875 1 345654 34431
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEe
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlS 321 (327)
++ .. +.++||+|+++-..+ ....++..+.+.|||||+++++
T Consensus 101 ----~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 101 ----DI----------AI-EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ----GC----------CC-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hC----------CC-CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 11 11 257899999987543 3467889999999999999987
No 163
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.45 E-value=2.9e-07 Score=85.47 Aligned_cols=86 Identities=19% Similarity=0.220 Sum_probs=63.7
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh--cCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL--NNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l--Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| ||+||.+++.|++|+.. +++...++++. .+|.. +.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~--~~D~~---------~~l 142 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ--VDDGF---------MHI 142 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE--ESCSH---------HHH
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHH---------HHH
Confidence 35689999999 99999999999999754 34544578875 45642 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHH-------HHHHHHHHhhccCCCcEEEEe
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNP-------LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~v-------L~~L~p~i~~~LkpGG~LIlS 321 (327)
. . ..++||+|++|+.... ..++...+.++|+|||++++.
T Consensus 143 ~--------~--~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 143 A--------K--SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp H--------T--CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred h--------h--CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 0 1 1468999999986421 256788999999999999986
No 164
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.45 E-value=7e-07 Score=78.65 Aligned_cols=92 Identities=16% Similarity=0.215 Sum_probs=66.9
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPS 262 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~ 262 (327)
...+...++|.++..++.+|||+|| +|+++.+++.|+++. . ++.+. .+|..
T Consensus 25 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~--~-----~~~~~--~~d~~-- 93 (239)
T 3bxo_A 25 AEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL--P-----DATLH--QGDMR-- 93 (239)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC--T-----TCEEE--ECCTT--
T ss_pred HHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC--C-----CCEEE--ECCHH--
Confidence 3455667778777777889999999 999999999999874 1 24443 34541
Q ss_pred CccccccchhhhcccccccCCCCCCCeeEEEEcC--C-----hHHHHHHHHHHhhccCCCcEEEEee
Q 041970 263 SMNERVDGIVEYLSSHKIRGISETEEYDVVIANI--L-----LNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 263 ~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANI--l-----a~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.....++||+|++.. + ...+..++..+.+.|+|||+++++-
T Consensus 94 -------------------~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 94 -------------------DFRLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp -------------------TCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred -------------------HcccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 011146899999532 1 1456778899999999999999973
No 165
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.44 E-value=1.4e-07 Score=83.95 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=62.2
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
..+.-.++..+..++.+|||+|| +|+++.+++.|++| . .++++. .+|..
T Consensus 35 ~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~--~~~~~~--~~d~~---- 101 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----A--PHADVY--EWNGK---- 101 (226)
T ss_dssp THHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----C--TTSEEE--ECCSC----
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----C--CCceEE--Ecchh----
Confidence 34555666667788999999999 99999999999998 1 234553 34541
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEE
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIl 320 (327)
+.+ +....++||+|++|. ....++..+.+.|||||+|+.
T Consensus 102 ----~~~----------~~~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 102 ----GEL----------PAGLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp ----SSC----------CTTCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEEE
T ss_pred ----hcc----------CCcCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEEE
Confidence 000 111146899999993 234566788899999999983
No 166
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.43 E-value=4.9e-07 Score=80.56 Aligned_cols=102 Identities=7% Similarity=-0.004 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPS 262 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~ 262 (327)
.+..-++..+...+.++.+|||+|| +|+++.+++.|++|+.. .++++. .+|..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~--~~d~~-- 111 (245)
T 3ggd_A 41 RAVVVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA-----ANISYR--LLDGL-- 111 (245)
T ss_dssp GTHHHHHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC-----TTEEEE--ECCTT--
T ss_pred HHHHHHHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc-----cCceEE--ECccc--
Confidence 3444555555555678899999999 99999999999998722 245554 45542
Q ss_pred CccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 263 SMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 263 ~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+.... ..+.....||+|++|-..+ ....++..+.+.|||||++++..+.
T Consensus 112 -------~~~~~------~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 112 -------VPEQA------AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp -------CHHHH------HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred -------ccccc------cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 10000 0000012499999985432 4567899999999999998887543
No 167
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.43 E-value=3.2e-07 Score=91.99 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+..+++..+|. .++|++|||+|| +|+++.+++.+++|++++|+. +.+. .+|.
T Consensus 88 ~ss~l~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~---v~~~--~~Da 160 (464)
T 3m6w_A 88 PSAQAVGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP---LAVT--QAPP 160 (464)
T ss_dssp TTTHHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC---CEEE--CSCH
T ss_pred HHHHHHHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe---EEEE--ECCH
Confidence 34566666665 468899999999 999999999999999999985 4543 4553
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------------------HHHHHHHHHHhhccCC
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------------------NPLLQLADHIVSYAKP 314 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------------------~vL~~L~p~i~~~Lkp 314 (327)
. ++. .. ..++||+|++|..- .....++..+.++|||
T Consensus 161 ~---------~l~---------~~-~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 161 R---------ALA---------EA-FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp H---------HHH---------HH-HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred H---------Hhh---------hh-ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 111 00 14689999998641 2236788899999999
Q ss_pred CcEEEEee
Q 041970 315 GAVVGISG 322 (327)
Q Consensus 315 GG~LIlSG 322 (327)
||+|+.|-
T Consensus 222 GG~LvysT 229 (464)
T 3m6w_A 222 GGVLVYST 229 (464)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99999874
No 168
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.42 E-value=6e-07 Score=90.17 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=73.5
Q ss_pred hhhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCC
Q 041970 200 HATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDR 258 (327)
Q Consensus 200 H~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d 258 (327)
-+...++..+|.-..++|.+|||+|| +|+++.+++.+++|++++|+. ++.+. .+|
T Consensus 101 d~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~--nv~~~--~~D 176 (479)
T 2frx_A 101 EASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS--NVALT--HFD 176 (479)
T ss_dssp CHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC--SEEEE--CCC
T ss_pred CHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--cEEEE--eCC
Confidence 35566666676533348999999999 999999999999999999985 36653 455
Q ss_pred CCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------------------HHHHHHHHHHhhccC
Q 041970 259 TFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------------------NPLLQLADHIVSYAK 313 (327)
Q Consensus 259 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------------------~vL~~L~p~i~~~Lk 313 (327)
.. .+. .. ..++||+|++|..- .....++..+.++||
T Consensus 177 ~~---------~~~---------~~-~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk 237 (479)
T 2frx_A 177 GR---------VFG---------AA-VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR 237 (479)
T ss_dssp ST---------THH---------HH-STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HH---------Hhh---------hh-ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC
Confidence 42 110 00 14689999998531 123467888999999
Q ss_pred CCcEEEEeec
Q 041970 314 PGAVVGISGI 323 (327)
Q Consensus 314 pGG~LIlSGI 323 (327)
|||+|++|..
T Consensus 238 pGG~LvysTc 247 (479)
T 2frx_A 238 PGGTLVYSTC 247 (479)
T ss_dssp EEEEEEEEES
T ss_pred CCCEEEEecc
Confidence 9999999853
No 169
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.42 E-value=5.7e-07 Score=81.88 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=64.0
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhc-C-CCCCcEEEEecCCCCCCCCccccccc
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALN-N-IGPKKMKLHLVPDRTFPSSMNERVDG 270 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lN-g-v~~~~v~v~~~~~d~~~~~~~g~~~~ 270 (327)
+.+|.+|||+|| +|+++.+++.|++|++.+ | +. +++++. .+|.. +
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~-~~v~~~--~~d~~---------~ 164 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP-DNWRLV--VSDLA---------D 164 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC-TTEEEE--CSCGG---------G
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC-CcEEEE--ECchH---------h
Confidence 467889999999 999999999999999988 5 43 456664 45542 0
Q ss_pred hhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 271 IVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 271 l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
. .+ +.++||+|++|+... ..++..+.+.|+|||+++++..
T Consensus 165 ~----------~~-~~~~~D~v~~~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 165 S----------EL-PDGSVDRAVLDMLAP--WEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp C----------CC-CTTCEEEEEEESSCG--GGGHHHHHHHEEEEEEEEEEES
T ss_pred c----------CC-CCCceeEEEECCcCH--HHHHHHHHHhCCCCCEEEEEeC
Confidence 0 11 246899999998632 2567888999999999998753
No 170
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.42 E-value=2.5e-07 Score=88.76 Aligned_cols=117 Identities=16% Similarity=0.169 Sum_probs=75.4
Q ss_pred eeEEEccCcccCCCc-hhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhc
Q 041970 185 TNIILNPGLAFGTGE-HATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 185 ~~I~idPG~AFGTG~-H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lN 243 (327)
..+.+|+.+-+..-. +.-+.+...+.......+++|||+|| ||+|+.+++.|++|+...
T Consensus 88 ~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~ 167 (334)
T 1xj5_A 88 KVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDV 167 (334)
T ss_dssp EEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH
T ss_pred eEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 456677655444332 22334333221111245689999999 999999999999998753
Q ss_pred --CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HH--HHHHHHHHhhccCC
Q 041970 244 --NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NP--LLQLADHIVSYAKP 314 (327)
Q Consensus 244 --gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~v--L~~L~p~i~~~Lkp 314 (327)
++...++++. .+|.. +.+. .. ..++||+|++|... .. ...++..+.++|+|
T Consensus 168 ~~gl~~~rv~~~--~~D~~---------~~l~--------~~-~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkp 227 (334)
T 1xj5_A 168 AIGYEDPRVNLV--IGDGV---------AFLK--------NA-AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRP 227 (334)
T ss_dssp HGGGGSTTEEEE--ESCHH---------HHHH--------TS-CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEE
T ss_pred ccccCCCcEEEE--ECCHH---------HHHH--------hc-cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCC
Confidence 4533567775 35541 1110 11 14689999999751 11 36788899999999
Q ss_pred CcEEEEe
Q 041970 315 GAVVGIS 321 (327)
Q Consensus 315 GG~LIlS 321 (327)
||+|++.
T Consensus 228 gG~lv~~ 234 (334)
T 1xj5_A 228 GGVVCTQ 234 (334)
T ss_dssp EEEEEEE
T ss_pred CcEEEEe
Confidence 9999985
No 171
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.42 E-value=6.3e-07 Score=85.66 Aligned_cols=82 Identities=21% Similarity=0.289 Sum_probs=61.4
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
.++++|||+|| +|+++ +++.|++|++.|++. +++++. .+|..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~-~~v~~~--~~d~~--------------- 109 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT-DRIVVI--PGKVE--------------- 109 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT-TTEEEE--ESCTT---------------
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCC-CcEEEE--Ecchh---------------
Confidence 47889999999 99997 679999999999986 567775 35541
Q ss_pred ccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEe
Q 041970 276 SSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+...++||+|+++... +.+...+..+.++|||||+++++
T Consensus 110 ------~~~~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 110 ------EVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ------TCCCSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ------hCCCCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 11113689999999642 22345556788999999999854
No 172
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.42 E-value=7e-07 Score=84.69 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=63.1
Q ss_pred hcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 214 IKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 214 ~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
..++++|||+|| +|+++ +++.|++|++.|++. +++++. .+|.. ++
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~--~~d~~---------~~--- 99 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFS-DKITLL--RGKLE---------DV--- 99 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCT-TTEEEE--ESCTT---------TS---
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHHHHHHHcCCC-CCEEEE--ECchh---------hc---
Confidence 357889999999 99995 899999999999997 578775 35541 11
Q ss_pred cccccccCCCCCCCeeEEEEcCCh------HHHHHHHHHHhhccCCCcEEEE
Q 041970 275 LSSHKIRGISETEEYDVVIANILL------NPLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla------~vL~~L~p~i~~~LkpGG~LIl 320 (327)
.. +.++||+|++|.+. ..+..++..+.++|||||+++.
T Consensus 100 -------~~-~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 100 -------HL-PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp -------CC-SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred -------cC-CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 11 24689999999642 2256677888999999999973
No 173
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.42 E-value=4.5e-07 Score=81.04 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=63.2
Q ss_pred HHHHHHHHhh-hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCC
Q 041970 204 KLCLLLLRSL-IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPS 262 (327)
Q Consensus 204 ~lcLe~Le~~-~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~ 262 (327)
+.+.++++.+ ..++.+|||+|| +|+++.+++.|++|. .++.+. .+|..
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-------~~~~~~--~~d~~-- 88 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-------PNTNFG--KADLA-- 88 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-------TTSEEE--ECCTT--
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------CCcEEE--ECChh--
Confidence 3444555544 346778999999 999999999999881 234443 34431
Q ss_pred CccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 263 SMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 263 ~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
.....++||+|++|-..+. ...++..+.+.|||||+++++-
T Consensus 89 -------------------~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 89 -------------------TWKPAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp -------------------TCCCSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -------------------hcCccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 0112568999999976543 4678889999999999999874
No 174
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.41 E-value=1.5e-07 Score=83.57 Aligned_cols=94 Identities=13% Similarity=0.263 Sum_probs=64.8
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee--------------------------ecCCHHHHHHHHHHHHhcCC---CCCcEEEE
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT--------------------------VDIDPQVIKSAHQNAALNNI---GPKKMKLH 253 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc--------------------------VDIDp~AV~~A~eNa~lNgv---~~~~v~v~ 253 (327)
.+.++++|...++++.+|||+|| +|+++.+++.|++|++.++. ...++++.
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34556665545667778888888 68999999999999988761 01246654
Q ss_pred ecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 254 LVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 254 ~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+|.. . .+...++||+|+++..... +...+.+.|||||+++++
T Consensus 151 --~~d~~--------~------------~~~~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 151 --EGDGR--------K------------GYPPNAPYNAIHVGAAAPD---TPTELINQLASGGRLIVP 193 (227)
T ss_dssp --ESCGG--------G------------CCGGGCSEEEEEECSCBSS---CCHHHHHTEEEEEEEEEE
T ss_pred --ECCcc--------c------------CCCcCCCccEEEECCchHH---HHHHHHHHhcCCCEEEEE
Confidence 35531 0 1111368999999865443 336788999999999886
No 175
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.41 E-value=3.1e-07 Score=85.50 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=57.8
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
+.+|.+|||+|| +|+++.+++.|++|++.+.+ ...+. ..+. +.
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v---~~~~~--~~~~----------~~---- 103 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCV---TIDLL--DITA----------EI---- 103 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCC---EEEEC--CTTS----------CC----
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccc---eeeee--eccc----------cc----
Confidence 357789999999 99999999999999876622 12221 1110 00
Q ss_pred ccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEe
Q 041970 276 SSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.....++||+|++|... ..+..++..+.++| |||++++|
T Consensus 104 ------~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 104 ------PKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp ------CGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ------ccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 00014689999998643 34566788899999 99999998
No 176
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.41 E-value=5.1e-07 Score=84.29 Aligned_cols=85 Identities=20% Similarity=0.232 Sum_probs=64.9
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|++ .+++.|++|++.+++. +++++. .+|.. +
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~-~~v~~~--~~d~~---------~---- 226 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA-SRYHTI--AGSAF---------E---- 226 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG-GGEEEE--ESCTT---------T----
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC-cceEEE--ecccc---------c----
Confidence 56789999999 9999 9999999999999886 578775 45542 0
Q ss_pred cccccccCCCCCCCeeEEEEc-CCh----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIAN-ILL----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvAN-Ila----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
..+ ...||+|+++ ++. .....++..+.+.|+|||++++....
T Consensus 227 ------~~~--~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 227 ------VDY--GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp ------SCC--CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------CCC--CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 011 3359999994 443 34568889999999999988887554
No 177
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.41 E-value=2.9e-07 Score=87.28 Aligned_cols=84 Identities=13% Similarity=0.247 Sum_probs=63.9
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+ +.+++.|++|++.+++. +++++. .+|.. +
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~--------~----- 244 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS-DRVDVV--EGDFF--------E----- 244 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT-TTEEEE--ECCTT--------S-----
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC-CceEEE--eCCCC--------C-----
Confidence 46789999999 677 99999999999999986 578775 45542 0
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.+ ...||+|+++-.. .....++..+.+.|+|||++++....
T Consensus 245 -------~~--~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 245 -------PL--PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -------CC--SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------CC--CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 11 2349999886432 23357889999999999999987654
No 178
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.40 E-value=8.3e-07 Score=79.03 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=59.5
Q ss_pred cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 215 KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 215 ~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
+++++|||+|| +|+++.+++.+.+|++.| .++++. .+|... ...+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~--~~d~~~------~~~~-- 141 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPV--IEDARH------PHKY-- 141 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEE--CSCTTC------GGGG--
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEE--EcccCC------hhhh--
Confidence 45667777777 899999999999999987 246653 456420 0000
Q ss_pred hcccccccCCCCCCCeeEEEEcCCh-HHHHHHHHHHhhccCCCcEEEEe
Q 041970 274 YLSSHKIRGISETEEYDVVIANILL-NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla-~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.. ..++||+|++|... +....++..+.+.|||||+++++
T Consensus 142 --------~~-~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 142 --------RM-LIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp --------GG-GCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------cc-cCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 00 14689999999863 33355678899999999999985
No 179
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.40 E-value=6.1e-07 Score=87.50 Aligned_cols=83 Identities=14% Similarity=0.215 Sum_probs=62.3
Q ss_pred CCCeeeeeee--------------------ecCCHHHHHHHHHHHHhc---------------CCCCCcEEEEecCCCCC
Q 041970 216 GGELFLDYGT--------------------VDIDPQVIKSAHQNAALN---------------NIGPKKMKLHLVPDRTF 260 (327)
Q Consensus 216 ~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lN---------------gv~~~~v~v~~~~~d~~ 260 (327)
+|.+|||+|| +|+|+.|++.|++|+++| ++. + +++. .+|+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~-i~v~--~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-T-IVIN--HDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-E-EEEE--ESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-c-eEEE--cCcHH
Confidence 6889999999 999999999999999999 775 2 6653 45541
Q ss_pred CCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 261 PSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 261 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++.. .. .++||+|+.|+.. ....++..+.+.|++||+++++.
T Consensus 123 ---------~~~~--------~~--~~~fD~I~lDP~~-~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 ---------RLMA--------ER--HRYFHFIDLDPFG-SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp ---------HHHH--------HS--TTCEEEEEECCSS-CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------HHHH--------hc--cCCCCEEEeCCCC-CHHHHHHHHHHhcCCCCEEEEEe
Confidence 1111 01 3579999999853 23456777788899999988764
No 180
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.39 E-value=5.6e-07 Score=84.66 Aligned_cols=88 Identities=22% Similarity=0.302 Sum_probs=61.1
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh--cCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL--NNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l--Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| +|+|+.+++.|++|+.. .+....++++. .+|.. +..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~---------~~~ 162 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGDGL---------AFV 162 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHH---------HHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHH---------HHH
Confidence 46789999999 99999999999998742 12223467765 35531 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHH-----H--HHHHHHHhhccCCCcEEEEee
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNP-----L--LQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~v-----L--~~L~p~i~~~LkpGG~LIlSG 322 (327)
. .. ..++||+|++|..... + ..++..+.++|||||+|++..
T Consensus 163 ~--------~~-~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 163 R--------QT-PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp H--------SS-CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred H--------hc-cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 0 00 2568999999975322 1 577889999999999999853
No 181
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.39 E-value=2.7e-07 Score=85.20 Aligned_cols=88 Identities=22% Similarity=0.234 Sum_probs=63.5
Q ss_pred HHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 205 LCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 205 lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
-.+++|.++...+.+|||+|| +|+++.+++.|+++ .++.+. .++..
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~--------~~v~~~--~~~~e------ 91 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH--------PRVTYA--VAPAE------ 91 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC--------TTEEEE--ECCTT------
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc--------CCceee--hhhhh------
Confidence 356788887777789999999 99999999887642 235554 34431
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcCChH--HHHHHHHHHhhccCCCcEEEEee
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANILLN--PLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~--vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
++ .+ ++++||+|+++-..+ .....+.++.++|||||+|++.+
T Consensus 92 ---~~----------~~-~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 92 ---DT----------GL-PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp ---CC----------CC-CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---hh----------cc-cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 11 12 367899999985432 24567889999999999998865
No 182
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.39 E-value=4.8e-07 Score=80.01 Aligned_cols=84 Identities=19% Similarity=0.236 Sum_probs=59.1
Q ss_pred cCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 215 KGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 215 ~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
.++++|||+|| +|+++.+++.+++|++.+ .++++. .+|.. +...
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~--~~d~~---------~~~~ 136 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPI--LGDAT---------KPEE 136 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEE--ECCTT---------CGGG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEE--EccCC---------Ccch
Confidence 45667777777 899999999999999876 246654 35542 0000
Q ss_pred hcccccccCCCCCCCeeEEEEcCChHHH-HHHHHHHhhccCCCcEEEEe
Q 041970 274 YLSSHKIRGISETEEYDVVIANILLNPL-LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla~vL-~~L~p~i~~~LkpGG~LIlS 321 (327)
.... .++||+|++|...... ..++..+.+.|||||+++++
T Consensus 137 ------~~~~--~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 137 ------YRAL--VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ------GTTT--CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------hhcc--cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 0011 3579999999874333 34488999999999999987
No 183
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.39 E-value=5.7e-07 Score=85.50 Aligned_cols=87 Identities=20% Similarity=0.239 Sum_probs=61.5
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhc--CCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALN--NIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lN--gv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| +|+|+.+++.|++|+..+ ++...++++. .+|.. +.+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~--~~D~~---------~~l 175 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF--CGDGF---------EFL 175 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE--CSCHH---------HHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE--EChHH---------HHH
Confidence 45689999999 999999999999998654 4433577775 45541 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChH-----HH--HHHHHHHhhccCCCcEEEEee
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLN-----PL--LQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~-----vL--~~L~p~i~~~LkpGG~LIlSG 322 (327)
. . ..++||+|++|.... .+ ..++..+.++|+|||++++..
T Consensus 176 ~--------~--~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 176 K--------N--HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp H--------H--CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred H--------h--cCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 0 0 256899999998521 12 577889999999999999863
No 184
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.37 E-value=7.1e-07 Score=79.82 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=62.9
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhc-CCCCCcEEEEecCCCCCCCCccccccch
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALN-NIGPKKMKLHLVPDRTFPSSMNERVDGI 271 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lN-gv~~~~v~v~~~~~d~~~~~~~g~~~~l 271 (327)
+.++++|||+|| +|+++.+++.|++|++.+ |. +++++. .+|.. +.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~--~~v~~~--~~d~~---------~~ 160 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV--ENVRFH--LGKLE---------EA 160 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC--CCEEEE--ESCGG---------GC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCEEEE--ECchh---------hc
Confidence 467889999999 999999999999999998 73 457764 34541 00
Q ss_pred hhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 272 VEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+ +.++||+|++|+... ..++..+.+.|+|||++++..
T Consensus 161 ----------~~-~~~~~D~v~~~~~~~--~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 161 ----------EL-EEAAYDGVALDLMEP--WKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ----------CC-CTTCEEEEEEESSCG--GGGHHHHHHHEEEEEEEEEEE
T ss_pred ----------CC-CCCCcCEEEECCcCH--HHHHHHHHHhCCCCCEEEEEe
Confidence 12 246899999997532 256788899999999998864
No 185
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.37 E-value=1.1e-06 Score=79.37 Aligned_cols=103 Identities=20% Similarity=0.187 Sum_probs=70.7
Q ss_pred hhHHHHHHHHHhh-hcCCCeeeeeee---------------------ecCCHH------HHHHHHHHHHhcCCCCCcEEE
Q 041970 201 ATTKLCLLLLRSL-IKGGELFLDYGT---------------------VDIDPQ------VIKSAHQNAALNNIGPKKMKL 252 (327)
Q Consensus 201 ~TT~lcLe~Le~~-~~~g~~VLDvGc---------------------VDIDp~------AV~~A~eNa~lNgv~~~~v~v 252 (327)
..++...++++.+ +++|++|||+|| +|+++. +++.|++|++.+++. +++++
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~-~~v~~ 105 (275)
T 3bkx_A 27 RQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG-DRLTV 105 (275)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG-GGEEE
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC-CceEE
Confidence 3445555566555 467899999999 899997 999999999999885 56777
Q ss_pred EecCCC-CCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEeecc
Q 041970 253 HLVPDR-TFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 253 ~~~~~d-~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. .+| .. ...+ .+ ..++||+|+++-.... ...+...+..+++|||+++++.+.
T Consensus 106 ~--~~d~~~-------~~~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 106 H--FNTNLS-------DDLG----------PI-ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp E--CSCCTT-------TCCG----------GG-TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred E--ECChhh-------hccC----------CC-CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 5 343 21 0000 11 2578999999865422 234666777777889999997543
No 186
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.36 E-value=9.1e-07 Score=80.05 Aligned_cols=89 Identities=16% Similarity=0.170 Sum_probs=63.8
Q ss_pred HHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 204 KLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 204 ~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
+...++|.+++.++.+|||+|| +|+++.+++.|+++... . +. .+|..
T Consensus 42 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~-----~---~~--~~d~~----- 106 (260)
T 2avn_A 42 RLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK-----N---VV--EAKAE----- 106 (260)
T ss_dssp HHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS-----C---EE--ECCTT-----
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCC-----C---EE--ECcHH-----
Confidence 3455667777667889999999 99999999999988541 1 21 24431
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcC-ChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANI-LLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANI-la~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
++ .. +.++||+|+++- +.+. ...++..+.+.|||||+++++.
T Consensus 107 ----~~----------~~-~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 107 ----DL----------PF-PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp ----SC----------CS-CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----HC----------CC-CCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 00 11 256899999974 2222 5778899999999999999864
No 187
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.36 E-value=6.9e-07 Score=84.48 Aligned_cols=86 Identities=23% Similarity=0.329 Sum_probs=63.2
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh-cC--CCCCcEEEEecCCCCCCCCccccccch
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL-NN--IGPKKMKLHLVPDRTFPSSMNERVDGI 271 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l-Ng--v~~~~v~v~~~~~d~~~~~~~g~~~~l 271 (327)
..+++|||+|| ||+|+.+++.|++|+.. |+ ++..++++. .+|.. +.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~--~~D~~---------~~ 144 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV--IDDAR---------AY 144 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE--ESCHH---------HH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEE--EchHH---------HH
Confidence 45689999999 99999999999999764 33 323567775 35541 11
Q ss_pred hhhcccccccCCCCCCCeeEEEEcCChHH----------HHHHHHHHhhccCCCcEEEEe
Q 041970 272 VEYLSSHKIRGISETEEYDVVIANILLNP----------LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~fDlVvANIla~v----------L~~L~p~i~~~LkpGG~LIlS 321 (327)
+. . ..++||+|++|..... ...++..+.++|+|||++++.
T Consensus 145 l~--------~--~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 145 LE--------R--TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp HH--------H--CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred HH--------h--cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 10 0 1568999999975432 367889999999999999876
No 188
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.36 E-value=2.4e-07 Score=78.82 Aligned_cols=84 Identities=8% Similarity=0.207 Sum_probs=59.7
Q ss_pred hcCCCeeeeeee----ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCe
Q 041970 214 IKGGELFLDYGT----VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEY 289 (327)
Q Consensus 214 ~~~g~~VLDvGc----VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~f 289 (327)
+++|++|||+|| +|+++.+++.|++++..| +++. .+|. .++. .... +.++|
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~~~~------~~~~--~~d~---------~~~~-------~~~~-~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNE------GRVS--VENI---------KQLL-------QSAH-KESSF 64 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHHHHTTTT------SEEE--EEEG---------GGGG-------GGCC-CSSCE
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHHHhcccC------cEEE--Eech---------hcCc-------cccC-CCCCE
Confidence 678999999999 999999999999886432 3333 2332 1110 0001 25689
Q ss_pred eEEEEcCChHH----HHHHHHHHhhccCCCcEEEEee
Q 041970 290 DVVIANILLNP----LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 290 DlVvANIla~v----L~~L~p~i~~~LkpGG~LIlSG 322 (327)
|+|+++...+. ...++..+.+.|||||+|+++.
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 99999754332 3778999999999999999853
No 189
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.36 E-value=8e-07 Score=76.80 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=58.1
Q ss_pred CCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccc
Q 041970 217 GELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSH 278 (327)
Q Consensus 217 g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~ 278 (327)
+.+|||+|| +|+++.+++.|++|. .++++. .+|.. ++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~--~~d~~---------~~------- 96 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH-------PSVTFH--HGTIT---------DL------- 96 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC-------TTSEEE--CCCGG---------GG-------
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-------CCCeEE--eCccc---------cc-------
Confidence 789999999 999999999999882 134443 45541 11
Q ss_pred cccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 279 KIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 279 ~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.. ..++||+|+++-.. +....++..+.++|||||+++++-.
T Consensus 97 ---~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 97 ---SD-SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp ---GG-SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ---cc-CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 11 25789999997542 2457789999999999999998754
No 190
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.36 E-value=1.2e-06 Score=84.62 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=61.6
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
..+|.+|||+|| +|+|+.+++.|++|++.+|+. +++++. .+|.. ++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~-~~i~~~--~~D~~---------~~~- 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL-DKIKFI--QGDAT---------QLS- 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG-GGCEEE--ECCGG---------GGG-
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC-CceEEE--ECChh---------hCC-
Confidence 577899999999 999999999999999999986 567764 45542 110
Q ss_pred hcccccccCCCCCCCeeEEEEcCCh-----------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 274 YLSSHKIRGISETEEYDVVIANILL-----------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIla-----------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
. ..++||+|++|+.. +.+..+...+.+.| +|+.++++
T Consensus 282 ---------~-~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 282 ---------Q-YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp ---------G-TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred ---------c-ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 1 24689999999762 33466778888888 44444443
No 191
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.35 E-value=9.8e-07 Score=81.98 Aligned_cols=85 Identities=18% Similarity=0.206 Sum_probs=61.0
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhc-CC-------CCCcEEEEecCCCCCCCCcccc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALN-NI-------GPKKMKLHLVPDRTFPSSMNER 267 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lN-gv-------~~~~v~v~~~~~d~~~~~~~g~ 267 (327)
..+++|||+|| ||+|+.+++.|++|++.| ++ ...++++. .+|..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~--~~D~~------- 144 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT--IGDGF------- 144 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE--ESCHH-------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE--ECchH-------
Confidence 45789999999 999999999999998222 33 23567775 34531
Q ss_pred ccchhhhcccccccCCCCCCCeeEEEEcCCh-----HH--HHHHHHHHhhccCCCcEEEEe
Q 041970 268 VDGIVEYLSSHKIRGISETEEYDVVIANILL-----NP--LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 268 ~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~v--L~~L~p~i~~~LkpGG~LIlS 321 (327)
+.+. . .++||+|++|... .. ...++..+.++|+|||++++.
T Consensus 145 --~~l~--------~---~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 145 --EFIK--------N---NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp --HHHH--------H---CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred --HHhc--------c---cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1110 0 4679999999863 22 256788999999999999986
No 192
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.35 E-value=6e-07 Score=84.78 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=62.9
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHh--cCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAAL--NNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~l--Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| ||+|+.+++.|++|+.. +++...++++. .+|.. +.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~--~~Da~---------~~l 162 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH--VGDGF---------EFM 162 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHH---------HHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHH---------HHH
Confidence 45689999999 99999999999999876 55533577775 35531 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHH-------HHHHHHHHhhccCCCcEEEEee
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNP-------LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~v-------L~~L~p~i~~~LkpGG~LIlSG 322 (327)
. . ..++||+|++|..... ...++..+.++|+|||++++..
T Consensus 163 ~--------~--~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 163 K--------Q--NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp H--------T--CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred h--------h--CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 0 1 1468999999976421 2457889999999999999864
No 193
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.35 E-value=5.6e-07 Score=79.48 Aligned_cols=80 Identities=15% Similarity=0.276 Sum_probs=57.9
Q ss_pred CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 216 GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 216 ~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
++.+|||+|| +|+++.+++.|++++..+ ++++. .+|.. ++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~--~~d~~---------~~----- 101 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT-----GITYE--RADLD---------KL----- 101 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS-----SEEEE--ECCGG---------GC-----
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC-----CceEE--EcChh---------hc-----
Confidence 5677888888 999999999999886543 35553 34431 10
Q ss_pred cccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 277 SHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
.. +.++||+|+++-..+. ...++..+.+.|+|||+++++-
T Consensus 102 -----~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 102 -----HL-PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp -----CC-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----cC-CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 11 2568999999865432 4678889999999999999864
No 194
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.33 E-value=8e-07 Score=75.98 Aligned_cols=88 Identities=22% Similarity=0.167 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee-----------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT-----------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSS 263 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc-----------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~ 263 (327)
|.|...+++|+....++++|||+|| +|+++.+++. .++ +++. .+|..
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~------~~~-----~~~~--~~d~~--- 71 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES------HRG-----GNLV--RADLL--- 71 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT------CSS-----SCEE--ECSTT---
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc------ccC-----CeEE--ECChh---
Confidence 6788999998875567889999999 9999999988 222 3343 35542
Q ss_pred ccccccchhhhcccccccCCCCCCCeeEEEEcCChHH------------HHHHHHHHhhccCCCcEEEEeec
Q 041970 264 MNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP------------LLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 264 ~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v------------L~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+ .. ..++||+|++|..... ...++..+.+.+ |||+++++..
T Consensus 72 -----~------------~~-~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 72 -----C------------SI-NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp -----T------------TB-CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred -----h------------hc-ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 0 11 1368999999986431 234556666666 9999998653
No 195
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.33 E-value=8.5e-07 Score=74.48 Aligned_cols=79 Identities=15% Similarity=0.172 Sum_probs=59.6
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
..++.+|||+|| +|+++.+++.|+++ . .++++. .+| .
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~--~~v~~~--~~d-~--------------- 69 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----F--DSVITL--SDP-K--------------- 69 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----C--TTSEEE--SSG-G---------------
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----C--CCcEEE--eCC-C---------------
Confidence 457789999999 99999999999998 1 245553 222 1
Q ss_pred ccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 276 SSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. ..++||+|+++-... ....++..+.+.|||||+++++...
T Consensus 70 ------~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 70 ------EI-PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp ------GS-CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------CC-CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 11 256899999986543 2467888999999999999998654
No 196
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.33 E-value=1e-06 Score=78.59 Aligned_cols=84 Identities=18% Similarity=0.196 Sum_probs=59.4
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
+++.+|||+|| +|+++.+++.|++|++.+ .++.+. .+|.. +...
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~--~~d~~---------~~~~- 136 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----ENIIPI--LGDAN---------KPQE- 136 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEE--ECCTT---------CGGG-
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEE--ECCCC---------Cccc-
Confidence 45678888888 999999999999998776 246553 35541 0000
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-HHHHHHHHHHhhccCCCcEEEEe
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.... .++||+|+.++.. +....++..+.+.|||||+++++
T Consensus 137 -----~~~~--~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 137 -----YANI--VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -----GTTT--SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cccc--CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 0011 3689999988643 33456788999999999999996
No 197
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.32 E-value=3.1e-06 Score=81.18 Aligned_cols=84 Identities=19% Similarity=0.341 Sum_probs=64.6
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+ |.+++.|++++..+++. +++++. .+|.+ +
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~-~~v~~~--~~d~~--------~----- 263 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA-DRCEIL--PGDFF--------E----- 263 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEE--ECCTT--------T-----
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC-CceEEe--ccCCC--------C-----
Confidence 45689999999 999 99999999999999886 678875 45642 0
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. ...||+|+++-.. .....++..+.+.|+|||+|++....
T Consensus 264 -------~~--p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 264 -------TI--PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp -------CC--CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred -------CC--CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 12 2379999885332 23457899999999999999987644
No 198
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.32 E-value=3e-06 Score=81.11 Aligned_cols=86 Identities=19% Similarity=0.235 Sum_probs=65.1
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||||| +|+ |.+++.|++|++.+++. +++++. .+|.. +.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~--------~~---- 241 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS-ERIHGH--GANLL--------DR---- 241 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG-GGEEEE--ECCCC--------SS----
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc-cceEEE--Ecccc--------cc----
Confidence 46689999999 899 99999999999988876 578875 46653 00
Q ss_pred ccccccc-CCCCCCCeeEEEEcC-C----hHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIR-GISETEEYDVVIANI-L----LNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~-~~~~~~~fDlVvANI-l----a~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. ++ .+.||+|+++- + ......++..+.+.|||||+|++....
T Consensus 242 ------~~~~--p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 242 ------DVPF--PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp ------SCCC--CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ------CCCC--CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 0 12 35799999853 3 234567889999999999999887643
No 199
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.32 E-value=1.2e-06 Score=82.74 Aligned_cols=94 Identities=19% Similarity=0.310 Sum_probs=68.5
Q ss_pred HHHHhh-hcC-CCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 208 LLLRSL-IKG-GELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 208 e~Le~~-~~~-g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
++++.+ ..+ +.+|||||| +|+ |.+++.|+++++.+++. +++++. .+|..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~----- 239 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG-GRVEFF--EKNLL----- 239 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG-GGEEEE--ECCTT-----
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC-CceEEE--eCCcc-----
Confidence 444443 234 789999999 999 88999999999999886 678875 46653
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+. ... ..+.||+|+++-.. .....++..+.+.|+|||+|++....
T Consensus 240 ----~~---------~~~-~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 240 ----DA---------RNF-EGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp ----CG---------GGG-TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ----cC---------ccc-CCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 00 000 14569999986443 24578899999999999999987643
No 200
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.30 E-value=1.2e-06 Score=80.85 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=52.0
Q ss_pred ecCCHHHHHHHHHHHHhc-CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH---H
Q 041970 226 VDIDPQVIKSAHQNAALN-NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP---L 301 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lN-gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v---L 301 (327)
+|+++.+++.|+++++.. ++. .+.+....++. .++.... .... ..++||+|+++-..+. .
T Consensus 88 vD~S~~ml~~a~~~~~~~~~~~--~v~~~~~~~~~---------~~~~~~~----~~~~-~~~~fD~V~~~~~l~~~~d~ 151 (292)
T 2aot_A 88 VEPSAEQIAKYKELVAKTSNLE--NVKFAWHKETS---------SEYQSRM----LEKK-ELQKWDFIHMIQMLYYVKDI 151 (292)
T ss_dssp ECSCHHHHHHHHHHHHTCSSCT--TEEEEEECSCH---------HHHHHHH----HTTT-CCCCEEEEEEESCGGGCSCH
T ss_pred EeCCHHHHHHHHHHHHhccCCC--cceEEEEecch---------hhhhhhh----cccc-CCCceeEEEEeeeeeecCCH
Confidence 899999999999998754 443 34443222322 1110000 0001 2568999999865443 4
Q ss_pred HHHHHHHhhccCCCcEEEEe
Q 041970 302 LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 302 ~~L~p~i~~~LkpGG~LIlS 321 (327)
...+..+.++|||||+|+++
T Consensus 152 ~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 152 PATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp HHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEE
Confidence 56888999999999999986
No 201
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.29 E-value=1.3e-06 Score=78.80 Aligned_cols=75 Identities=12% Similarity=0.068 Sum_probs=53.1
Q ss_pred ecCCHHHHHHHHHHHHhc--------CCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC
Q 041970 226 VDIDPQVIKSAHQNAALN--------NIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL 297 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lN--------gv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl 297 (327)
+|+++.+++.|++|++.| ++. ++++. .+|+. +.+ ......+.+|.|+.+..
T Consensus 79 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~--nv~~~--~~D~~---------~~l--------~~~~~~~~~d~v~~~~p 137 (246)
T 2vdv_E 79 MEIRVQVTNYVEDRIIALRNNTASKHGFQ--NINVL--RGNAM---------KFL--------PNFFEKGQLSKMFFCFP 137 (246)
T ss_dssp EESCHHHHHHHHHHHHHHHHTC-CCSTTT--TEEEE--ECCTT---------SCG--------GGTSCTTCEEEEEEESC
T ss_pred EEcCHHHHHHHHHHHHHHhhccccccCCC--cEEEE--eccHH---------HHH--------HHhccccccCEEEEECC
Confidence 899999999999999987 764 46664 46652 100 01112568999998864
Q ss_pred hHHH-----------HHHHHHHhhccCCCcEEEEe
Q 041970 298 LNPL-----------LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 298 a~vL-----------~~L~p~i~~~LkpGG~LIlS 321 (327)
.... ..++..+.++|+|||+|++.
T Consensus 138 ~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 138 DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 3211 46888999999999999885
No 202
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.28 E-value=5.8e-06 Score=79.65 Aligned_cols=74 Identities=11% Similarity=0.068 Sum_probs=53.8
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--HHHHH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--NPLLQ 303 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--~vL~~ 303 (327)
+|+|+.+++.|++|++.||+. ++++. .+|.. +.+ .. ...++||+|++|+.. ..+..
T Consensus 201 vDi~~~~l~~a~~~~~~~g~~--~v~~~--~~D~~--------~~l---------~~-~~~~~fD~Vi~~~p~~~~~~~~ 258 (373)
T 2qm3_A 201 LDIDERLTKFIEKAANEIGYE--DIEIF--TFDLR--------KPL---------PD-YALHKFDTFITDPPETLEAIRA 258 (373)
T ss_dssp ECSCHHHHHHHHHHHHHHTCC--CEEEE--CCCTT--------SCC---------CT-TTSSCBSEEEECCCSSHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCC--CEEEE--EChhh--------hhc---------hh-hccCCccEEEECCCCchHHHHH
Confidence 999999999999999999985 57764 56652 001 00 013579999999753 23577
Q ss_pred HHHHHhhccCCCcE-EEEe
Q 041970 304 LADHIVSYAKPGAV-VGIS 321 (327)
Q Consensus 304 L~p~i~~~LkpGG~-LIlS 321 (327)
++..+.+.|||||+ ++++
T Consensus 259 ~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 259 FVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp HHHHHHHTBCSTTCEEEEE
T ss_pred HHHHHHHHcccCCeEEEEE
Confidence 88899999999994 3554
No 203
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.28 E-value=1.7e-06 Score=85.71 Aligned_cols=106 Identities=20% Similarity=0.195 Sum_probs=76.3
Q ss_pred ccCCCc----hhhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCC
Q 041970 194 AFGTGE----HATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPK 248 (327)
Q Consensus 194 AFGTG~----H~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~ 248 (327)
.|..|. .+..+++..++. .++|++|||+|| +|+++.+++.+++|++.+|+.
T Consensus 235 ~~~~G~~~~qd~~s~l~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-- 310 (450)
T 2yxl_A 235 AFNEGKIIVQEEASAVASIVLD--PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-- 310 (450)
T ss_dssp HHHTTSEEECCHHHHHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC--
T ss_pred hhhCceEEecCchhHHHHHhcC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC--
Confidence 355665 466777777664 568899999999 999999999999999999985
Q ss_pred cEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------------------HHHHH
Q 041970 249 KMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------------------NPLLQ 303 (327)
Q Consensus 249 ~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------------------~vL~~ 303 (327)
++.+. .+|.. +.. ..+ ..++||+|++|..- .....
T Consensus 311 ~v~~~--~~D~~---------~~~--------~~~-~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~ 370 (450)
T 2yxl_A 311 IVKPL--VKDAR---------KAP--------EII-GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRE 370 (450)
T ss_dssp SEEEE--CSCTT---------CCS--------SSS-CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHH
T ss_pred cEEEE--EcChh---------hcc--------hhh-ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHH
Confidence 36654 45542 000 001 13679999997531 11256
Q ss_pred HHHHHhhccCCCcEEEEeec
Q 041970 304 LADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 304 L~p~i~~~LkpGG~LIlSGI 323 (327)
++..+.++|||||+|++|..
T Consensus 371 iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 371 LLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp HHHHHHTTEEEEEEEEEEES
T ss_pred HHHHHHHhcCCCcEEEEEeC
Confidence 78899999999999998753
No 204
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.28 E-value=1.5e-06 Score=82.62 Aligned_cols=83 Identities=18% Similarity=0.242 Sum_probs=63.7
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||+|| +|+ +.+++.|++|++.+++. +++++. .+|.. +
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~--------~----- 243 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA-DRVTVA--EGDFF--------K----- 243 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEE--ECCTT--------S-----
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC-CceEEE--eCCCC--------C-----
Confidence 46789999999 899 99999999999999986 577775 45542 0
Q ss_pred cccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 275 LSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.+ ...||+|+++-.. .....++..+.+.|+|||++++..+
T Consensus 244 -------~~--~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 244 -------PL--PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -------CC--SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -------cC--CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 11 2349999987543 2335788999999999999988765
No 205
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.27 E-value=1.7e-06 Score=81.27 Aligned_cols=83 Identities=14% Similarity=0.158 Sum_probs=63.8
Q ss_pred CCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 216 GGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 216 ~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
++.+|||+|| +|+ |.+++.|+++++..++. +++++. .+|.+ +
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~--------~------ 230 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS-GRAQVV--VGSFF--------D------ 230 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEE--ECCTT--------S------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC-cCeEEe--cCCCC--------C------
Confidence 3568999999 899 99999999999999886 678875 45642 0
Q ss_pred ccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 276 SSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. ..+||+|+++-.. +....++..+.+.|+|||+|++....
T Consensus 231 ------~~--p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 231 ------PL--PAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp ------CC--CCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ------CC--CCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 11 2279999985332 23578899999999999999987653
No 206
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.26 E-value=2.4e-06 Score=81.20 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=71.6
Q ss_pred cCCCchhhHH-HHHHHHHhh--hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEE
Q 041970 195 FGTGEHATTK-LCLLLLRSL--IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMK 251 (327)
Q Consensus 195 FGTG~H~TT~-lcLe~Le~~--~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~ 251 (327)
|..+.+..++ ...+.+.+. ..++.+|||+|| +|+ |.+++.|++|++.+++. ++++
T Consensus 166 f~~~m~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~ 243 (359)
T 1x19_A 166 YFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA-DRMR 243 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT-TTEE
T ss_pred HHHHHHHhccchhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC-CCEE
Confidence 4444444443 333333333 356789999999 999 99999999999999886 5687
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
+. .+|.. + . +...+|+|+++-.. +....++..+.+.|||||++++...
T Consensus 244 ~~--~~d~~---------~------------~-~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 244 GI--AVDIY---------K------------E-SYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EE--ECCTT---------T------------S-CCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred EE--eCccc---------c------------C-CCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 75 45652 0 0 12235999886443 2367789999999999999977654
No 207
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.25 E-value=1.1e-06 Score=86.67 Aligned_cols=72 Identities=24% Similarity=0.346 Sum_probs=51.1
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH-----
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP----- 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v----- 300 (327)
+|+|+.+++.|+.|+.++|+....+.+. .+|.+. .....+||+|++|++...
T Consensus 214 ~Ei~~~~~~lA~~nl~l~g~~~~~~~i~--~gD~l~---------------------~~~~~~fD~Iv~NPPf~~~~~~~ 270 (445)
T 2okc_A 214 VDNTPLVVTLASMNLYLHGIGTDRSPIV--CEDSLE---------------------KEPSTLVDVILANPPFGTRPAGS 270 (445)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSSCCSEE--ECCTTT---------------------SCCSSCEEEEEECCCSSCCCTTC
T ss_pred EeCCHHHHHHHHHHHHHhCCCcCCCCEe--eCCCCC---------------------CcccCCcCEEEECCCCCCccccc
Confidence 8999999999999999999852123333 466530 011348999999976321
Q ss_pred ---------------HHHHHHHHhhccCCCcEEEE
Q 041970 301 ---------------LLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 301 ---------------L~~L~p~i~~~LkpGG~LIl 320 (327)
-..++..+.++|+|||++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 271 VDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp CCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 13567888899999998754
No 208
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.24 E-value=1.2e-06 Score=77.96 Aligned_cols=80 Identities=21% Similarity=0.282 Sum_probs=57.9
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
++++++|||+|| +|+++.+++.|++| + ++. .+|.. +..
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~-----~~~--~~d~~---------~~~--- 94 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-----F-----NVV--KSDAI---------EYL--- 94 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-----S-----EEE--CSCHH---------HHH---
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----c-----cee--eccHH---------HHh---
Confidence 357789999999 99999999999887 2 222 23321 111
Q ss_pred ccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeec
Q 041970 276 SSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
..+ +.++||+|+++-..+ .+..++..+.+.|||||+++++..
T Consensus 95 -----~~~-~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 95 -----KSL-PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp -----HTS-CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred -----hhc-CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 012 257899999986543 457889999999999999998754
No 209
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.23 E-value=1.1e-06 Score=83.65 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=51.4
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH------
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN------ 299 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------ 299 (327)
+|+|+.+++.|+.|+..+|+. +.+. .+|.+. .. ..++||+|++|+..+
T Consensus 165 iDi~~~~~~~a~~n~~~~g~~---~~i~--~~D~l~--------------------~~-~~~~fD~Ii~NPPfg~~~~~~ 218 (344)
T 2f8l_A 165 VDVDDLLISLALVGADLQRQK---MTLL--HQDGLA--------------------NL-LVDPVDVVISDLPVGYYPDDE 218 (344)
T ss_dssp EESCHHHHHHHHHHHHHHTCC---CEEE--ESCTTS--------------------CC-CCCCEEEEEEECCCSEESCHH
T ss_pred EECCHHHHHHHHHHHHhCCCC---ceEE--ECCCCC--------------------cc-ccCCccEEEECCCCCCcCchh
Confidence 899999999999999999873 3443 466530 01 146899999998721
Q ss_pred ---------------HHHHHHHHHhhccCCCcEEEEe
Q 041970 300 ---------------PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 300 ---------------vL~~L~p~i~~~LkpGG~LIlS 321 (327)
....++..+.++|+|||++++.
T Consensus 219 ~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 219 NAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp HHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 1125678889999999987764
No 210
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.21 E-value=1.9e-06 Score=84.67 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=73.0
Q ss_pred hhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 200 HATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 200 H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
.+.++++..++. .++|++|||+|| +|+++.+++.+++|++.+|+. +.+. .+|.
T Consensus 232 d~~s~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~---~~~~--~~D~ 304 (429)
T 1sqg_A 232 DASAQGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK---ATVK--QGDG 304 (429)
T ss_dssp CHHHHTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC---CEEE--ECCT
T ss_pred CHHHHHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC---eEEE--eCch
Confidence 667777777775 468899999999 999999999999999999974 3443 3554
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------------------HHHHHHHHHHhhccCC
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------------------NPLLQLADHIVSYAKP 314 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------------------~vL~~L~p~i~~~Lkp 314 (327)
. +... .+ ..++||+|++|..- .....++..+.++|||
T Consensus 305 ~---------~~~~--------~~-~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp 366 (429)
T 1sqg_A 305 R---------YPSQ--------WC-GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 (429)
T ss_dssp T---------CTHH--------HH-TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE
T ss_pred h---------hchh--------hc-ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 1100 01 13689999998631 1225778899999999
Q ss_pred CcEEEEee
Q 041970 315 GAVVGISG 322 (327)
Q Consensus 315 GG~LIlSG 322 (327)
||+|++|.
T Consensus 367 GG~lvyst 374 (429)
T 1sqg_A 367 GGTLVYAT 374 (429)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEEE
Confidence 99999986
No 211
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.21 E-value=2.7e-06 Score=73.84 Aligned_cols=74 Identities=18% Similarity=0.189 Sum_probs=53.8
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
.++++|||+|| +|+|+.+++.|++|++.|++ ++++. .+|..
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~--~~d~~--------------- 107 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG---KFKVF--IGDVS--------------- 107 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT---SEEEE--ESCGG---------------
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC---CEEEE--ECchH---------------
Confidence 46789999999 99999999999999999987 35554 35541
Q ss_pred ccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEE
Q 041970 276 SSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVV 318 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~L 318 (327)
.+ .++||+|++|+.. .....++..+.+.+ ||.+
T Consensus 108 ------~~--~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~ 145 (207)
T 1wy7_A 108 ------EF--NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVY 145 (207)
T ss_dssp ------GC--CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEE
T ss_pred ------Hc--CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEE
Confidence 12 3489999999863 23345566666666 5544
No 212
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.21 E-value=2.3e-06 Score=79.65 Aligned_cols=87 Identities=21% Similarity=0.217 Sum_probs=62.7
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcC--CCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNN--IGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNg--v~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
..+++|||+|| +|+|+.+++.|++|+..++ +...++++. .+|.. +.+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~---------~~l 145 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDAS---------KFL 145 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHH---------HHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE--ECChH---------HHH
Confidence 45689999999 9999999999999986543 223467765 35531 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCCh-----HHH--HHHHHHHhhccCCCcEEEEee
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILL-----NPL--LQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla-----~vL--~~L~p~i~~~LkpGG~LIlSG 322 (327)
. . ..++||+|++|... ..+ ..++..+.++|+|||++++..
T Consensus 146 ~--------~--~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 146 E--------N--VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp H--------H--CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred H--------h--CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 0 0 14689999998642 222 578889999999999999874
No 213
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.19 E-value=2.4e-06 Score=77.39 Aligned_cols=75 Identities=7% Similarity=-0.005 Sum_probs=51.3
Q ss_pred ecCCHHHHHHHHHHHHh------cCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH
Q 041970 226 VDIDPQVIKSAHQNAAL------NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN 299 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~l------Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~ 299 (327)
+|+++.+++.|++|++. ++.. ++++. .+|+. +.+.. .+ ..++||.|+.|..-.
T Consensus 76 iDis~~~l~~A~~~~~~l~~~~~~~~~--nv~~~--~~d~~--------~~l~~--------~~-~~~~~D~v~~~~~dp 134 (235)
T 3ckk_A 76 LEIRVKVSDYVQDRIRALRAAPAGGFQ--NIACL--RSNAM--------KHLPN--------FF-YKGQLTKMFFLFPDP 134 (235)
T ss_dssp EESCHHHHHHHHHHHHHHHHSTTCCCT--TEEEE--ECCTT--------TCHHH--------HC-CTTCEEEEEEESCC-
T ss_pred EECCHHHHHHHHHHHHHHHHHHhcCCC--eEEEE--ECcHH--------Hhhhh--------hC-CCcCeeEEEEeCCCc
Confidence 89999999999999864 4443 46664 45652 00100 01 257899999986432
Q ss_pred HH-----------HHHHHHHhhccCCCcEEEEe
Q 041970 300 PL-----------LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 300 vL-----------~~L~p~i~~~LkpGG~LIlS 321 (327)
.. ..++..+.++|||||.|+++
T Consensus 135 ~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 135 HFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp ----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 21 36888999999999999875
No 214
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.19 E-value=2.6e-06 Score=78.07 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=59.7
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
+++|++|||+|| +|+++.+++.+++|++..+ ++... .++.. .....
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V--~~d~~------~p~~~- 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPI--LGDAR------FPEKY- 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEE--ESCTT------CGGGG-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEE--EEecc------Ccccc-
Confidence 578999999999 9999999999999986643 23322 23331 00000
Q ss_pred hhcccccccCCCCCCCeeEEEEcCCh-HHHHHHHHHHhhccCCCcEEEEe
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILL-NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla-~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.. ..+.+|+|++.+.. +.-..++..+.+.|||||+++++
T Consensus 142 ---------~~-~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 142 ---------RH-LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp ---------TT-TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------cc-ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 11 25689999998754 33345778899999999999986
No 215
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.18 E-value=1.6e-06 Score=79.08 Aligned_cols=78 Identities=22% Similarity=0.224 Sum_probs=56.4
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++.+|||+|| +|+++.+++.|++++ .+ +.+. .+|..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~--~~-----~~~~--~~d~~---------------- 110 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY--PH-----LHFD--VADAR---------------- 110 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--TT-----SCEE--ECCTT----------------
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC--CC-----CEEE--ECChh----------------
Confidence 45678888888 999999999999875 22 3332 24431
Q ss_pred cccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 277 SHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+...++||+|+++-..+. ...++..+.+.|||||+++++-
T Consensus 111 -----~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 111 -----NFRVDKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp -----TCCCSSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----hCCcCCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 1112468999999876532 4578889999999999999864
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.18 E-value=1.4e-06 Score=83.42 Aligned_cols=102 Identities=14% Similarity=0.223 Sum_probs=71.0
Q ss_pred chhhHHHHHHHHHh---hhcCCC--eeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEE
Q 041970 199 EHATTKLCLLLLRS---LIKGGE--LFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLH 253 (327)
Q Consensus 199 ~H~TT~lcLe~Le~---~~~~g~--~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~ 253 (327)
.++-++++...+.- ....++ +|||+|| ||||+.+++.|++|+.++. ..+++++
T Consensus 67 e~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~--~~rv~v~ 144 (317)
T 3gjy_A 67 EFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR--APRVKIR 144 (317)
T ss_dssp CSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC--TTTEEEE
T ss_pred hhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC--CCceEEE
Confidence 45566666666654 223345 9999999 9999999999999987653 2467775
Q ss_pred ecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HH--HHHHHHHhhccCCCcEEEEee
Q 041970 254 LVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PL--LQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 254 ~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL--~~L~p~i~~~LkpGG~LIlSG 322 (327)
.+|.. +.+. .. ..++||+|++|.... .+ .+++..+.++|+|||+|++.-
T Consensus 145 --~~Da~---------~~l~--------~~-~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 145 --VDDAR---------MVAE--------SF-TPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp --ESCHH---------HHHH--------TC-CTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ECcHH---------HHHh--------hc-cCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 35541 1111 11 246899999986432 22 578889999999999998754
No 217
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.17 E-value=4.5e-06 Score=76.32 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=55.2
Q ss_pred hcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 214 IKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 214 ~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
+++|++|||+|| +|+++.+++...+.++.+ .++.+. .+|.. .....
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i--~~Da~-------~~~~~ 140 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPL--LADAR-------FPQSY 140 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEE--ECCTT-------CGGGT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEE--Ecccc-------cchhh
Confidence 467888888888 999999987666655543 124443 35542 00000
Q ss_pred hhcccccccCCCCCCCeeEEEEcCChHHHHH-HHHHHhhccCCCcEEEEe
Q 041970 273 EYLSSHKIRGISETEEYDVVIANILLNPLLQ-LADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIla~vL~~-L~p~i~~~LkpGG~LIlS 321 (327)
..+ .++||+|++|........ +...+.+.|||||+|++|
T Consensus 141 --------~~~--~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 141 --------KSV--VENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --------TTT--CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------hcc--ccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 011 468999999986543333 344555699999999988
No 218
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.17 E-value=1.8e-06 Score=77.73 Aligned_cols=89 Identities=11% Similarity=0.081 Sum_probs=60.8
Q ss_pred HHHhhhcCCCeeeeeee--------------------ecCC-HHHHHHH---HHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 209 LLRSLIKGGELFLDYGT--------------------VDID-PQVIKSA---HQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 209 ~Le~~~~~g~~VLDvGc--------------------VDID-p~AV~~A---~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
+++.+.+++++|||+|| +|++ +.+++.| ++|++.+++. ++++. .+|..
T Consensus 17 ~~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~--~v~~~--~~d~~---- 88 (225)
T 3p2e_A 17 LTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS--NVVFV--IAAAE---- 88 (225)
T ss_dssp HHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS--SEEEE--CCBTT----
T ss_pred HHHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC--CeEEE--EcCHH----
Confidence 33444567889999999 9999 5555555 9999888875 36653 44541
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChHHH--------HHHHHHHhhccCCCcEEEE
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL--------LQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL--------~~L~p~i~~~LkpGG~LIl 320 (327)
++. . .....+|.|.+|...... ..++..+.++|||||++++
T Consensus 89 -----~l~---------~-~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 89 -----SLP---------F-ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -----BCC---------G-GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -----Hhh---------h-hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 110 0 013568889998753322 3467889999999999998
No 219
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.16 E-value=4e-06 Score=78.52 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=62.7
Q ss_pred Ceeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhccc
Q 041970 218 ELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSS 277 (327)
Q Consensus 218 ~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~ 277 (327)
.+|||+|| +|+ |.+++.|++|++.+++. +++++. .+|..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~--~~d~~----------------- 227 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG-ERVSLV--GGDML----------------- 227 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT-TSEEEE--ESCTT-----------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC-CcEEEe--cCCCC-----------------
Confidence 79999999 999 99999999999888775 567764 45542
Q ss_pred ccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 278 HKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 278 ~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
... .++||+|+++-.. .....++..+.+.|+|||++++....
T Consensus 228 ---~~~--~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 228 ---QEV--PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ---TCC--CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred ---CCC--CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 011 3579999986443 23458899999999999999987654
No 220
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.15 E-value=5.2e-06 Score=72.99 Aligned_cols=86 Identities=10% Similarity=0.125 Sum_probs=60.7
Q ss_pred HHHHHHhhhcCCCeeeeeee--------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccch
Q 041970 206 CLLLLRSLIKGGELFLDYGT--------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGI 271 (327)
Q Consensus 206 cLe~Le~~~~~g~~VLDvGc--------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l 271 (327)
-+++|.++.. +.+|||+|| +|+++.+++.|++| + +++. .+|.. ++
T Consensus 38 ~~~~l~~~~~-~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~----~-----~~~~--~~d~~---------~~ 96 (219)
T 1vlm_A 38 ELQAVKCLLP-EGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKR----G-----VFVL--KGTAE---------NL 96 (219)
T ss_dssp HHHHHHHHCC-SSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHT----T-----CEEE--ECBTT---------BC
T ss_pred HHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhc----C-----CEEE--Ecccc---------cC
Confidence 3445655544 889999999 89999999999887 2 2332 23431 00
Q ss_pred hhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeec
Q 041970 272 VEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.. ..++||+|+++-..+ ....++..+.+.|+|||+++++..
T Consensus 97 ----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 97 ----------PL-KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp ----------CS-CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------CC-CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 11 246899999986533 236788899999999999999854
No 221
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.14 E-value=1.1e-05 Score=74.71 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=53.9
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH-----
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP----- 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v----- 300 (327)
+|+||.+++.|++++..+ .++++. .+|... ...+...... ...+ ...+||+|++|-..+.
T Consensus 110 vD~sp~~l~~Ar~~~~~~----~~v~~~--~~D~~~------~~~~~~~~~~--~~~~-d~~~~d~v~~~~vlh~~~d~~ 174 (274)
T 2qe6_A 110 VDIDPMVLTHGRALLAKD----PNTAVF--TADVRD------PEYILNHPDV--RRMI-DFSRPAAIMLVGMLHYLSPDV 174 (274)
T ss_dssp EESSHHHHHHHHHHHTTC----TTEEEE--ECCTTC------HHHHHHSHHH--HHHC-CTTSCCEEEETTTGGGSCTTT
T ss_pred EECChHHHHHHHHhcCCC----CCeEEE--EeeCCC------chhhhccchh--hccC-CCCCCEEEEEechhhhCCcHH
Confidence 999999999999998432 356654 466520 0000000000 0011 1247999999865432
Q ss_pred HHHHHHHHhhccCCCcEEEEeecc
Q 041970 301 LLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 301 L~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
...++..+.+.|+|||+|+++-..
T Consensus 175 ~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 175 VDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred HHHHHHHHHHhCCCCcEEEEEEec
Confidence 567899999999999999998754
No 222
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.12 E-value=2.2e-06 Score=74.38 Aligned_cols=83 Identities=23% Similarity=0.368 Sum_probs=56.3
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++.+|||+|| +|+++.+++.|+++ ..+ .+. .++. .++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~-----~~~--~~~~---------~~~~~--- 108 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA---GAG-----EVH--LASY---------AQLAE--- 108 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT---CSS-----CEE--ECCH---------HHHHT---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh---ccc-----ccc--hhhH---------Hhhcc---
Confidence 35688999999 99999999999988 222 121 1232 11100
Q ss_pred cccccCCCCCCCeeEEEEcCChH--HHHHHHHHHhhccCCCcEEEEeec
Q 041970 277 SHKIRGISETEEYDVVIANILLN--PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~--vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.......+||+|+++-..+ ....++..+.+.|||||+++++..
T Consensus 109 ----~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 109 ----AKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp ----TCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ----cccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 0112245699999985433 345688899999999999999864
No 223
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.09 E-value=8.1e-06 Score=70.61 Aligned_cols=91 Identities=21% Similarity=0.299 Sum_probs=56.9
Q ss_pred cCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEec
Q 041970 195 FGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLV 255 (327)
Q Consensus 195 FGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~ 255 (327)
|.|..+-+.+++..+......++++|||+|| +|+++.+++.|++|++ ++++.
T Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~-- 100 (200)
T 1ne2_A 30 YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-------GVNFM-- 100 (200)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-------TSEEE--
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-------CCEEE--
Confidence 4455444455543332222346789999999 9999999999999975 23443
Q ss_pred CCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHH-----HHHHHHHhhccCCCcEEE
Q 041970 256 PDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL-----LQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 256 ~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL-----~~L~p~i~~~LkpGG~LI 319 (327)
.+|.. .+ .++||+|++|...+.. ..++..+.+.+ |+.++
T Consensus 101 ~~d~~---------------------~~--~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~ 144 (200)
T 1ne2_A 101 VADVS---------------------EI--SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYS 144 (200)
T ss_dssp ECCGG---------------------GC--CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEE
T ss_pred ECcHH---------------------HC--CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEE
Confidence 34531 12 3689999999875433 34566666666 44433
No 224
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.09 E-value=4e-06 Score=73.46 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=59.8
Q ss_pred HHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHH----HHhcCCCCCcEEEEecCCCC
Q 041970 204 KLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQN----AALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 204 ~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eN----a~lNgv~~~~v~v~~~~~d~ 259 (327)
+..++++. .+++.+|||+|| +|+++.+++.+.++ ++.+++. ++++. .+|.
T Consensus 17 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~--~v~~~--~~d~ 90 (218)
T 3mq2_A 17 DAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP--NLLYL--WATA 90 (218)
T ss_dssp HHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT--TEEEE--ECCS
T ss_pred HHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC--ceEEE--ecch
Confidence 44455554 467889999999 99999988764444 4445553 46664 4554
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHH--------HHHHHHHhhccCCCcEEEEe
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL--------LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL--------~~L~p~i~~~LkpGG~LIlS 321 (327)
. ++ .. ..+. |.|+.++....+ ..++..+.+.|||||+++++
T Consensus 91 ~---------~l----------~~-~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 91 E---------RL----------PP-LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp T---------TC----------CS-CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred h---------hC----------CC-CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 2 11 11 1334 777766543332 57889999999999999985
No 225
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.08 E-value=5.7e-06 Score=74.73 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHhhh-cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLI-KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~-~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+..+...+++.+++ .++.+|||+|| +|+++.+++.|+++. .++.+. .+|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~--~~d~ 139 (269)
T 1p91_A 69 PLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------PQVTFC--VASS 139 (269)
T ss_dssp HHHHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------TTSEEE--ECCT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEE--Ecch
Confidence 34445566666655 57789999999 999999999998874 123343 2443
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEee
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
. ++ .. ..++||+|+++-... .+..+.+.|||||++++..
T Consensus 140 ~---------~~----------~~-~~~~fD~v~~~~~~~----~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 140 H---------RL----------PF-SDTSMDAIIRIYAPC----KAEELARVVKPGGWVITAT 178 (269)
T ss_dssp T---------SC----------SB-CTTCEEEEEEESCCC----CHHHHHHHEEEEEEEEEEE
T ss_pred h---------hC----------CC-CCCceeEEEEeCChh----hHHHHHHhcCCCcEEEEEE
Confidence 1 00 11 246899999986643 3577889999999999874
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.06 E-value=7.2e-06 Score=76.34 Aligned_cols=62 Identities=15% Similarity=0.349 Sum_probs=46.7
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++++|||+|| +|+|+.+++.|++|++.++.. +++++. .+|..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~--~~D~~---------------- 87 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVA-SKLQVL--VGDVL---------------- 87 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEE--ESCTT----------------
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCC-CceEEE--Eccee----------------
Confidence 56789999999 999999999999999887764 457764 46652
Q ss_pred cccccCCCCCCCeeEEEEcCChHHH
Q 041970 277 SHKIRGISETEEYDVVIANILLNPL 301 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~vL 301 (327)
.. ....||+|++|+..+..
T Consensus 88 -----~~-~~~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 88 -----KT-DLPFFDTCVANLPYQIS 106 (285)
T ss_dssp -----TS-CCCCCSEEEEECCGGGH
T ss_pred -----cc-cchhhcEEEEecCcccc
Confidence 01 12379999999876543
No 227
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.05 E-value=2.3e-05 Score=70.40 Aligned_cols=106 Identities=15% Similarity=0.090 Sum_probs=67.7
Q ss_pred HHHhhhcCCCeeeeeee-----------------ecCCHHHHHHHHHHHHhcCC--CCCcEEEEecCCCCCCCC------
Q 041970 209 LLRSLIKGGELFLDYGT-----------------VDIDPQVIKSAHQNAALNNI--GPKKMKLHLVPDRTFPSS------ 263 (327)
Q Consensus 209 ~Le~~~~~g~~VLDvGc-----------------VDIDp~AV~~A~eNa~lNgv--~~~~v~v~~~~~d~~~~~------ 263 (327)
+|...+++.++||++|| +|.|+.-.+.|++|.+.+|+ . ++++++. +++....
T Consensus 23 ~L~~~l~~a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-~~I~~~~--gda~~~~~wg~p~ 99 (202)
T 3cvo_A 23 ALRMAYEEAEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG-TEVNIVW--TDIGPTGDWGHPV 99 (202)
T ss_dssp HHHHHHHHCSEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT-CEEEEEE--CCCSSBCGGGCBS
T ss_pred HHHHHhhCCCEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-CceEEEE--eCchhhhcccccc
Confidence 33334456678888888 99999999999999999998 5 6788763 6642100
Q ss_pred -cc--ccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 264 -MN--ERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 264 -~~--g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. ....++.. ........++||+|+-.--... .-++.+.++|+|||++++-.++
T Consensus 100 ~~~~~~~l~~~~~-----~i~~~~~~~~fDlIfIDg~k~~--~~~~~~l~~l~~GG~Iv~DNv~ 156 (202)
T 3cvo_A 100 SDAKWRSYPDYPL-----AVWRTEGFRHPDVVLVDGRFRV--GCALATAFSITRPVTLLFDDYS 156 (202)
T ss_dssp SSTTGGGTTHHHH-----GGGGCTTCCCCSEEEECSSSHH--HHHHHHHHHCSSCEEEEETTGG
T ss_pred cchhhhhHHHHhh-----hhhccccCCCCCEEEEeCCCch--hHHHHHHHhcCCCeEEEEeCCc
Confidence 00 00000000 0001112378999998876443 4556677999999999887654
No 228
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.05 E-value=3.2e-06 Score=78.24 Aligned_cols=80 Identities=14% Similarity=-0.002 Sum_probs=59.1
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHh--cCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAAL--NNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~l--Ngv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
..+++|||+|| +|+|+.+++.|++|+.. +++...++++. .+|..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~--~~D~~-------------- 134 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHA--KQLLD-------------- 134 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEE--SSGGG--------------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEE--echHH--------------
Confidence 34679999999 99999999999998643 23333567775 34431
Q ss_pred cccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 275 LSSHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.. .++||+|+++.. ++. .+...+.+.|+|||++++.
T Consensus 135 -------~~--~~~fD~Ii~d~~-dp~-~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 135 -------LD--IKKYDLIFCLQE-PDI-HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp -------SC--CCCEEEEEESSC-CCH-HHHHHHHTTEEEEEEEEEE
T ss_pred -------HH--HhhCCEEEECCC-ChH-HHHHHHHHhcCCCcEEEEE
Confidence 11 167999999954 333 3788999999999999885
No 229
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.02 E-value=4.4e-06 Score=75.70 Aligned_cols=87 Identities=11% Similarity=0.166 Sum_probs=60.7
Q ss_pred HHHHHHhhh--cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCcc
Q 041970 206 CLLLLRSLI--KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMN 265 (327)
Q Consensus 206 cLe~Le~~~--~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~ 265 (327)
..+.+.+.+ .++.+|||+|| +|+++.+++.|+++. ++++. .+|..
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~--------~~~~~--~~d~~----- 86 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP--------QVEWF--TGYAE----- 86 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT--------TEEEE--CCCTT-----
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc--------CCEEE--ECchh-----
Confidence 334444444 57889999999 999999999887664 24553 35541
Q ss_pred ccccchhhhcccccccCCCCCCCeeEEEEcCChH---HHHHHHHHHhhccCCCcEEEEeec
Q 041970 266 ERVDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 266 g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++ .+ +.++||+|+++-..+ ....++..+.+.|| ||++++...
T Consensus 87 ----~~----------~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 87 ----NL----------AL-PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp ----SC----------CS-CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred ----hC----------CC-CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 10 11 257899999997543 34678899999999 998777643
No 230
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.97 E-value=3.1e-05 Score=75.56 Aligned_cols=70 Identities=19% Similarity=0.132 Sum_probs=49.6
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL------- 298 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla------- 298 (327)
+|+|+.|++.|++|++.+|+. +++++. .+|.. + +....+||+||+|+..
T Consensus 262 vDid~~al~~Ar~Na~~~gl~-~~I~~~--~~D~~---------~------------l~~~~~fD~Iv~NPPYG~rl~~~ 317 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLE-DVVKLK--QMRLQ---------D------------FKTNKINGVLISNPPYGERLLDD 317 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCT-TTEEEE--ECCGG---------G------------CCCCCCSCEEEECCCCTTTTSCH
T ss_pred EECCHHHHHHHHHHHHHcCCC-CceEEE--ECChH---------H------------CCccCCcCEEEECCchhhccCCH
Confidence 499999999999999999997 567764 45542 1 1123589999999873
Q ss_pred HHHHHHHHHHhhccCC--CcEEE
Q 041970 299 NPLLQLADHIVSYAKP--GAVVG 319 (327)
Q Consensus 299 ~vL~~L~p~i~~~Lkp--GG~LI 319 (327)
..+..+...+.+.||+ ||.++
T Consensus 318 ~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 318 KAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp HHHHHHHHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHHHHHhhCCCcEEE
Confidence 3455666666666655 76543
No 231
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.96 E-value=2.6e-05 Score=73.08 Aligned_cols=71 Identities=18% Similarity=0.324 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+.+++.+. ..++++|||+|| +|+|+.+++.|++|++.+++. ++++. .+|..
T Consensus 31 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~--~v~~~--~~D~~---- 100 (299)
T 2h1r_A 31 LDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYN--NLEVY--EGDAI---- 100 (299)
T ss_dssp HHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCC--CEEC------CC----
T ss_pred HHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEE--ECchh----
Confidence 344444432 357789999999 999999999999999988874 46653 45542
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChHHH
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL 301 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL 301 (327)
.. ...+||+|++|+.....
T Consensus 101 -----------------~~-~~~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 101 -----------------KT-VFPKFDVCTANIPYKIS 119 (299)
T ss_dssp -----------------SS-CCCCCSEEEEECCGGGH
T ss_pred -----------------hC-CcccCCEEEEcCCcccc
Confidence 11 13479999999876543
No 232
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.95 E-value=1.7e-05 Score=74.13 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=28.4
Q ss_pred CCCeeEEEE-cCCh----HHHHHHHHHHhhccCCCcEEEE
Q 041970 286 TEEYDVVIA-NILL----NPLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 286 ~~~fDlVvA-NIla----~vL~~L~p~i~~~LkpGG~LIl 320 (327)
.++||+|+| |.+. ....+++..+.+.|+|||+|++
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 468999999 4432 3457899999999999999987
No 233
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.92 E-value=4.7e-05 Score=72.11 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=65.4
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+..+++..+|. .++|++|||+|| +|+++.+++.+++|++++|+. ++++. .+|.
T Consensus 89 ~~s~l~~~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~--~v~~~--~~D~ 162 (309)
T 2b9e_A 89 RASCLPAMLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS--CCELA--EEDF 162 (309)
T ss_dssp TGGGHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEE--ECCG
T ss_pred HHHHHHHHHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEE--eCCh
Confidence 34556666664 567889999999 999999999999999999985 46654 4554
Q ss_pred CCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh----------H-----------------HHHHHHHHHhhcc
Q 041970 260 FPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL----------N-----------------PLLQLADHIVSYA 312 (327)
Q Consensus 260 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla----------~-----------------vL~~L~p~i~~~L 312 (327)
. ++. .......+||.|++|..- + ...+++....+++
T Consensus 163 ~---------~~~--------~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l 225 (309)
T 2b9e_A 163 L---------AVS--------PSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP 225 (309)
T ss_dssp G---------GSC--------TTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT
T ss_pred H---------hcC--------ccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 110 000001479999997431 1 1124566666777
Q ss_pred CCCcEEEEee
Q 041970 313 KPGAVVGISG 322 (327)
Q Consensus 313 kpGG~LIlSG 322 (327)
+ ||+|+.|.
T Consensus 226 ~-gG~lvYsT 234 (309)
T 2b9e_A 226 S-LQRLVYST 234 (309)
T ss_dssp T-CCEEEEEE
T ss_pred C-CCEEEEEC
Confidence 6 99999875
No 234
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.91 E-value=8.4e-06 Score=70.79 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=53.4
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++.+|||+|| +|+++.+++.|++|.. ++. .+|.. +..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~---------~~~--~~d~~---------~~~---- 86 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLD---------HVV--LGDIE---------TMD---- 86 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSS---------EEE--ESCTT---------TCC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC---------cEE--Ecchh---------hcC----
Confidence 35567777777 9999999999887641 122 24431 000
Q ss_pred cccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEee
Q 041970 277 SHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlSG 322 (327)
..+ +.++||+|+++-..+. ...++..+.+.|+|||+++++-
T Consensus 87 ----~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 87 ----MPY-EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ----CCS-CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred ----CCC-CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 011 2468999999854432 3578899999999999999874
No 235
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.85 E-value=1.1e-05 Score=72.85 Aligned_cols=96 Identities=9% Similarity=0.059 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee------------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT------------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVP 256 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc------------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~ 256 (327)
|.|...+..+-... ++++|||+|| ||+++.+++.|+ +.. .++++. .
T Consensus 67 p~~~~~l~~~l~~~-~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~-~~v~~~--~ 136 (236)
T 2bm8_A 67 PDTQAVYHDMLWEL-RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDM-ENITLH--Q 136 (236)
T ss_dssp HHHHHHHHHHHHHH-CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGC-TTEEEE--E
T ss_pred HHHHHHHHHHHHhc-CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccC-CceEEE--E
Confidence 44444444433333 5689999999 899999988887 122 356664 4
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHHHHHHHHHhh-ccCCCcEEEEee
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQLADHIVS-YAKPGAVVGISG 322 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~-~LkpGG~LIlSG 322 (327)
+|... . ..+ ... ...+||+|+++.....+..++..+.+ +|||||+|+++.
T Consensus 137 gD~~~----~--~~l---------~~~-~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 137 GDCSD----L--TTF---------EHL-REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CCSSC----S--GGG---------GGG-SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred Ccchh----H--HHH---------Hhh-ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 66520 0 000 001 13479999987654455667788886 999999999864
No 236
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.80 E-value=1.7e-05 Score=77.24 Aligned_cols=117 Identities=17% Similarity=0.136 Sum_probs=70.6
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee-------------------ecCCHHHHHHHHHHHHh-cC-
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT-------------------VDIDPQVIKSAHQNAAL-NN- 244 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~l-Ng- 244 (327)
.+.||--+-+.+..+.-+++.+.... .-..+++|||+|| ||||+.+++.|++|+.. |+
T Consensus 159 ~L~LDG~~q~te~D~~YhE~l~~~~~-~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~ 237 (364)
T 2qfm_A 159 ILILSGDVNLAESDLAYTRAIMGSGK-EDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGD 237 (364)
T ss_dssp EEEETTEEEEETTCHHHHHHHTTTTC-CCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----
T ss_pred EEEECCEEeeecCchHHHHHHhhhhh-hCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccc
Confidence 46677666666655444443332211 1124679999999 99999999999999753 32
Q ss_pred -CCC---CcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-------------HHHHHHHHH
Q 041970 245 -IGP---KKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-------------NPLLQLADH 307 (327)
Q Consensus 245 -v~~---~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-------------~vL~~L~p~ 307 (327)
++. ++++++ .+|+. +.+.. .....++||+|+.+... +.+..+...
T Consensus 238 ~l~dp~~~rv~vi--~~Da~---------~~L~~-------~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~ 299 (364)
T 2qfm_A 238 VLDNLKGDCYQVL--IEDCI---------PVLKR-------YAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL 299 (364)
T ss_dssp CCSSSEETTEEEE--ESCHH---------HHHHH-------HHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH
T ss_pred cccccCCCcEEEE--ECcHH---------HHHHh-------hhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHH
Confidence 321 267775 46642 11110 00014689999999743 122333344
Q ss_pred HhhccCCCcEEEEe
Q 041970 308 IVSYAKPGAVVGIS 321 (327)
Q Consensus 308 i~~~LkpGG~LIlS 321 (327)
+.++|+|||.+++-
T Consensus 300 ~~~~L~pgGilv~q 313 (364)
T 2qfm_A 300 SMKVLKQDGKYFTQ 313 (364)
T ss_dssp HHHTEEEEEEEEEE
T ss_pred HHhhCCCCcEEEEE
Confidence 48999999998864
No 237
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.78 E-value=1e-05 Score=77.89 Aligned_cols=90 Identities=20% Similarity=0.239 Sum_probs=54.8
Q ss_pred CCchhhHHHHHHHHHhhhc--CCCeeeeeee---------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEE
Q 041970 197 TGEHATTKLCLLLLRSLIK--GGELFLDYGT---------------------VDIDPQVIKSAHQNAALNNIGPKKMKLH 253 (327)
Q Consensus 197 TG~H~TT~lcLe~Le~~~~--~g~~VLDvGc---------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~ 253 (327)
.|.+-|-+...+++.+.+. ++.+|||+|| +|+|+.+++.| .++.+.
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~ 86 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGI 86 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEE
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEE
Confidence 3445555555555554443 2456666666 89999998776 134543
Q ss_pred ecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--------------HH------------------H
Q 041970 254 LVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--------------NP------------------L 301 (327)
Q Consensus 254 ~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--------------~v------------------L 301 (327)
.+|.. .....++||+|++|+.. .. .
T Consensus 87 --~~D~~---------------------~~~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (421)
T 2ih2_A 87 --LADFL---------------------LWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLY 143 (421)
T ss_dssp --ESCGG---------------------GCCCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHH
T ss_pred --eCChh---------------------hcCccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHH
Confidence 35542 11124689999999542 11 2
Q ss_pred HHHHHHHhhccCCCcEEEE
Q 041970 302 LQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 302 ~~L~p~i~~~LkpGG~LIl 320 (327)
..++..+.++|+|||++++
T Consensus 144 ~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 144 GAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 2557788899999998876
No 238
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.76 E-value=3.1e-06 Score=79.99 Aligned_cols=125 Identities=12% Similarity=0.038 Sum_probs=73.2
Q ss_pred EEEcC-c-EEEEcCCC-CCceeEEEcc-CcccCC-CchhhHHHHHHHHHhhh--cCCCeeeeeee---------------
Q 041970 168 VEVTK-G-LWIVPEWN-VQATNIILNP-GLAFGT-GEHATTKLCLLLLRSLI--KGGELFLDYGT--------------- 225 (327)
Q Consensus 168 ~~vg~-~-l~I~P~W~-~~~~~I~idP-G~AFGT-G~H~TT~lcLe~Le~~~--~~g~~VLDvGc--------------- 225 (327)
+.+.+ . .+..|... .....|.++- .+.|-+ |.+ -..++|+.+. .+|++|||+||
T Consensus 34 V~Vng~~~~v~kp~~~V~~~d~I~v~g~~~~yvsrg~~----Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~ 109 (291)
T 3hp7_A 34 VVNVINGERYDKPGEKIDDGTELKLKGEKLRYVSRGGL----KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAK 109 (291)
T ss_dssp EEETTTCCBCCCTTCEEETTCCEEETTCCCCSSSTTHH----HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCS
T ss_pred EEECCeEEEEccCCCCCCCCCEEEEcccccccccchHH----HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCC
Confidence 34544 3 34455543 1123466652 244543 333 2234444442 35789999999
Q ss_pred ----ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHHH
Q 041970 226 ----VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNPL 301 (327)
Q Consensus 226 ----VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL 301 (327)
+|+++.+++.+.++ + .++... ...+.- .+ ....+ +...||+|+++.....+
T Consensus 110 ~V~aVDvs~~mL~~a~r~---~----~rv~~~-~~~ni~---------~l-------~~~~l-~~~~fD~v~~d~sf~sl 164 (291)
T 3hp7_A 110 LVYAVDVGTNQLVWKLRQ---D----DRVRSM-EQYNFR---------YA-------EPVDF-TEGLPSFASIDVSFISL 164 (291)
T ss_dssp EEEEECSSSSCSCHHHHT---C----TTEEEE-CSCCGG---------GC-------CGGGC-TTCCCSEEEECCSSSCG
T ss_pred EEEEEECCHHHHHHHHHh---C----ccccee-cccCce---------ec-------chhhC-CCCCCCEEEEEeeHhhH
Confidence 99999999886543 1 233221 112210 00 00012 12359999999877777
Q ss_pred HHHHHHHhhccCCCcEEEEe
Q 041970 302 LQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 302 ~~L~p~i~~~LkpGG~LIlS 321 (327)
..+++.+.++|+|||+|++.
T Consensus 165 ~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 165 NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHcCcCCEEEEE
Confidence 88999999999999999885
No 239
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.74 E-value=0.0001 Score=75.03 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=52.1
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH-----
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP----- 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v----- 300 (327)
+|+|+.+++.|+.|+.++|+..+.+.+. .+|.+.. ++.. ....+||+||+|++...
T Consensus 254 ~Eid~~~~~lA~~Nl~l~gi~~~~~~I~--~gDtL~~----------------d~p~-~~~~~fD~IvaNPPf~~~~~~~ 314 (542)
T 3lkd_A 254 QELNTSTYNLARMNMILHGVPIENQFLH--NADTLDE----------------DWPT-QEPTNFDGVLMNPPYSAKWSAS 314 (542)
T ss_dssp EESCHHHHHHHHHHHHHTTCCGGGEEEE--ESCTTTS----------------CSCC-SSCCCBSEEEECCCTTCCCCCC
T ss_pred EECcHHHHHHHHHHHHHcCCCcCccceE--ecceecc----------------cccc-cccccccEEEecCCcCCccccc
Confidence 8999999999999999999853445554 4665310 0000 12568999999986310
Q ss_pred -----------H----------HHHHHHHhhccC-CCcEEE
Q 041970 301 -----------L----------LQLADHIVSYAK-PGAVVG 319 (327)
Q Consensus 301 -----------L----------~~L~p~i~~~Lk-pGG~LI 319 (327)
. ..++..+.++|+ |||++.
T Consensus 315 ~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 315 SGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp GGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred hhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 0 135778889999 999874
No 240
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.73 E-value=4.9e-05 Score=66.51 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=26.5
Q ss_pred CCeeEEEEcCCh--------------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 287 EEYDVVIANILL--------------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 287 ~~fDlVvANIla--------------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
++||+|++|... .....++..+.++|||||.|++.
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 489999998632 12345677788999999999874
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.71 E-value=6.4e-05 Score=70.65 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=58.4
Q ss_pred Ceeeeeee-----------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 218 ELFLDYGT-----------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 218 ~~VLDvGc-----------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.+|||+|| ||+||.+++.||+++..++. .++++. .+|+.. ...++..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~--~~~~~v--~aD~~~------~~~~l~~ 149 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE--GRTAYV--EADMLD------PASILDA 149 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS--SEEEEE--ECCTTC------HHHHHTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC--CcEEEE--EecccC------hhhhhcc
Confidence 68999999 99999999999998865432 356654 466520 0000000
Q ss_pred cccccccCCCCCCCeeEEEEcCChHHH------HHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIANILLNPL------LQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~vL------~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
... ...+...+++ .|++|-+.+.+ ..++..+.+.|+|||+|++|-..
T Consensus 150 ~~~--~~~~D~~~p~-av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 150 PEL--RDTLDLTRPV-ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHH--HTTCCTTSCC-EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred ccc--ccccCcCCcc-hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 000 0011112334 47778655433 46889999999999999998544
No 242
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.70 E-value=4.4e-05 Score=77.63 Aligned_cols=74 Identities=18% Similarity=0.241 Sum_probs=51.3
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCC---cEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH--
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPK---KMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP-- 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~---~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v-- 300 (327)
+|+|+.+++.|+.|+.++|+..+ ++.+. .+|.+. .. .....+||+||+|++...
T Consensus 217 iEid~~~~~lA~~nl~l~gi~~~~~~~~~I~--~gDtL~-------~~------------~~~~~~fD~Vv~NPPf~~~~ 275 (541)
T 2ar0_A 217 LELVPGTRRLALMNCLLHDIEGNLDHGGAIR--LGNTLG-------SD------------GENLPKAHIVATNPPFGSAA 275 (541)
T ss_dssp EESCHHHHHHHHHHHHTTTCCCBGGGTBSEE--ESCTTS-------HH------------HHTSCCEEEEEECCCCTTCS
T ss_pred EcCCHHHHHHHHHHHHHhCCCccccccCCeE--eCCCcc-------cc------------cccccCCeEEEECCCccccc
Confidence 89999999999999999998631 13332 356530 00 001468999999986321
Q ss_pred ---------------HHHHHHHHhhccCCCcEEEE
Q 041970 301 ---------------LLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 301 ---------------L~~L~p~i~~~LkpGG~LIl 320 (327)
-..++..+.++|+|||++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 276 GTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp SCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 23567788899999998754
No 243
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.69 E-value=2.4e-05 Score=74.11 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=54.9
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.++.+|||||| +|+ +..+. +++++..++. +++++. .+|.+ +
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~-~~v~~~--~~d~~--------~----- 243 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVA-GRWKVV--EGDFL--------R----- 243 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGT-TSEEEE--ECCTT--------T-----
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCC-CCeEEE--ecCCC--------C-----
Confidence 45779999999 777 44444 4454445554 567764 45542 0
Q ss_pred cccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.. . +||+|+++-..+ ....++..+.+.|||||+|++....
T Consensus 244 -------~~--p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 244 -------EV--P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp -------CC--C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred -------CC--C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 12 3 899999864332 3367899999999999999887643
No 244
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.69 E-value=1.7e-05 Score=65.46 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=31.1
Q ss_pred CCCeeEEEEcCChH--------------HHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 286 TEEYDVVIANILLN--------------PLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 286 ~~~fDlVvANIla~--------------vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
.++||+|++|.... ....++..+.++|+|||+++++....
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 46899999986521 12578889999999999999986543
No 245
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.69 E-value=1.9e-05 Score=76.30 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=55.0
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++.+|||+|| +|+++.+++.|+++ ++.. . .... ..+....+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~~---~----~~~~----~~~~~~~l----- 165 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIRV---R----TDFF----EKATADDV----- 165 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCCE---E----CSCC----SHHHHHHH-----
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCCc---c----eeee----chhhHhhc-----
Confidence 46789999999 99999999998876 4431 1 0110 00100111
Q ss_pred cccccCCCCCCCeeEEEEcCChHH---HHHHHHHHhhccCCCcEEEEe
Q 041970 277 SHKIRGISETEEYDVVIANILLNP---LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~v---L~~L~p~i~~~LkpGG~LIlS 321 (327)
.. ..++||+|+++-..+. ...++..+.++|||||+++++
T Consensus 166 -----~~-~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 166 -----RR-TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp -----HH-HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cc-CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 01 1478999999865433 467888999999999999986
No 246
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.66 E-value=0.00011 Score=74.69 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=63.9
Q ss_pred HHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccc
Q 041970 207 LLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERV 268 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~ 268 (327)
...+.+.+..+.+|||||| ||.++.+|+.|+..++.+|.- .+++.+ +++
T Consensus 57 ~~~~~~~~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~--~~~--------- 123 (569)
T 4azs_A 57 YDNLSRALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDF--AAEFRV--GRI--------- 123 (569)
T ss_dssp HHHHHHHHTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEE--CCH---------
T ss_pred HHHHHhhcCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEE--CCH---------
Confidence 3445555556779999999 999999999999999988742 355542 332
Q ss_pred cchhhhcccccccCCCCCCCeeEEEEcCChHHHHH-----HHHHHhhccCCCcEEEEeecc
Q 041970 269 DGIVEYLSSHKIRGISETEEYDVVIANILLNPLLQ-----LADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 269 ~~l~~~~~~~~~~~~~~~~~fDlVvANIla~vL~~-----L~p~i~~~LkpGG~LIlSGIl 324 (327)
.++.+ .. ..++||+|+|.-..+.+.. -+-.+.+.|+++|..++-.|.
T Consensus 124 ~~~~~--------~~-~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 124 EEVIA--------AL-EEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHH--------HC-CTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred HHHhh--------hc-cCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 22221 01 2568999999976655432 123456667788877766654
No 247
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.61 E-value=9e-05 Score=75.50 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=51.1
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChHH-----
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLNP----- 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~v----- 300 (327)
+|+|+.+++.|+.|+.++|+.. .+.+ ..+|.+. . ......+||+||+|++...
T Consensus 289 ~Eid~~~~~lA~~Nl~l~gi~~-~i~i--~~gDtL~-------~------------~~~~~~~fD~Iv~NPPf~~~~~~~ 346 (544)
T 3khk_A 289 QESNPTTWKLAAMNMVIRGIDF-NFGK--KNADSFL-------D------------DQHPDLRADFVMTNPPFNMKDWWH 346 (544)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCC-BCCS--SSCCTTT-------S------------CSCTTCCEEEEEECCCSSCCSCCC
T ss_pred EeCCHHHHHHHHHHHHHhCCCc-ccce--eccchhc-------C------------cccccccccEEEECCCcCCccccc
Confidence 8999999999999999999873 3322 3566530 0 0112468999999986432
Q ss_pred ---------------------------HHHHHHHHhhccCCCcEEE
Q 041970 301 ---------------------------LLQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 301 ---------------------------L~~L~p~i~~~LkpGG~LI 319 (327)
-..++..+.++|+|||++.
T Consensus 347 ~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 392 (544)
T 3khk_A 347 EKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMA 392 (544)
T ss_dssp GGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEE
T ss_pred hhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEE
Confidence 0146778889999999853
No 248
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.59 E-value=8.7e-05 Score=73.42 Aligned_cols=39 Identities=15% Similarity=0.218 Sum_probs=31.9
Q ss_pred CCCeeEEEEcCCh--HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 286 TEEYDVVIANILL--NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 286 ~~~fDlVvANIla--~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.++||+|++|... ......+..+.++|||||+|+++.+.
T Consensus 286 d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 286 YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3689999998643 33566788999999999999998775
No 249
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.56 E-value=3.7e-06 Score=76.29 Aligned_cols=81 Identities=9% Similarity=0.042 Sum_probs=48.0
Q ss_pred CCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 216 GGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 216 ~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
+|++|||+|| +|+++.+++.|++|.... .+. ...+.. ...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~-------~~~-~~~~~~------~~~------- 95 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERV-------VVM-EQFNFR------NAV------- 95 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTE-------EEE-CSCCGG------GCC-------
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccc-------ccc-ccceEE------EeC-------
Confidence 4679999999 999999999987764322 111 011110 000
Q ss_pred cccccCCCCCCCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEe
Q 041970 277 SHKIRGISETEEYDVVIANILLNPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
...+. ...||.+.++.....+..+++.+.+.|||||++++.
T Consensus 96 ---~~~~~-~~~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 96 ---LADFE-QGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp ---GGGCC-SCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred ---HhHcC-cCCCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 00010 112344444433333377889999999999999884
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.51 E-value=4.1e-05 Score=72.26 Aligned_cols=36 Identities=11% Similarity=0.221 Sum_probs=26.8
Q ss_pred CCCeeEEEEcCChH-------H--HHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILLN-------P--LLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-------v--L~~L~p~i~~~LkpGG~LIlS 321 (327)
.++||+|+||.... . ....+..+.++|||||.|++.
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46899999986531 1 114567788999999999885
No 251
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.51 E-value=6.1e-05 Score=71.00 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=30.4
Q ss_pred CCCeeEEEEcCCh--------------HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 286 TEEYDVVIANILL--------------NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 286 ~~~fDlVvANIla--------------~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.++||+|++|... ..+..++..+.++|||||+|++..+
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3679999999642 2355788999999999999998654
No 252
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.51 E-value=0.00011 Score=62.98 Aligned_cols=38 Identities=11% Similarity=0.288 Sum_probs=28.1
Q ss_pred CCCeeEEEEcCCh--------HH------HHHHHHHHhhccCCCcEEEEeec
Q 041970 286 TEEYDVVIANILL--------NP------LLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 286 ~~~fDlVvANIla--------~v------L~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.++||+|++|... +. ...++..+.+.|||||+|+++-.
T Consensus 104 ~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 104 DKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 4689999998642 11 12367788999999999998643
No 253
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.50 E-value=0.00054 Score=71.72 Aligned_cols=73 Identities=23% Similarity=0.301 Sum_probs=48.1
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-------
Q 041970 227 DIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN------- 299 (327)
Q Consensus 227 DIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~------- 299 (327)
|+|+.|++.|++|++++|+. +.+.+. .+|.. ++. .....++||+||+|++.+
T Consensus 263 Did~~av~~A~~N~~~agv~-~~i~~~--~~D~~---------~~~---------~~~~~~~~d~Iv~NPPYG~Rlg~~~ 321 (703)
T 3v97_A 263 DSDARVIQRARTNARLAGIG-ELITFE--VKDVA---------QLT---------NPLPKGPYGTVLSNPPYGERLDSEP 321 (703)
T ss_dssp ESCHHHHHHHHHHHHHTTCG-GGEEEE--ECCGG---------GCC---------CSCTTCCCCEEEECCCCCC---CCH
T ss_pred ECCHHHHHHHHHHHHHcCCC-CceEEE--ECChh---------hCc---------cccccCCCCEEEeCCCccccccchh
Confidence 89999999999999999997 567765 46642 110 000123799999998742
Q ss_pred HHHHHHHH---HhhccCCCcEEEE
Q 041970 300 PLLQLADH---IVSYAKPGAVVGI 320 (327)
Q Consensus 300 vL~~L~p~---i~~~LkpGG~LIl 320 (327)
.+..+... ..+.+.|||.+++
T Consensus 322 ~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 322 ALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCCeEEE
Confidence 33444433 3444558987654
No 254
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.42 E-value=0.00037 Score=66.51 Aligned_cols=83 Identities=24% Similarity=0.326 Sum_probs=59.0
Q ss_pred cCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhh
Q 041970 215 KGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEY 274 (327)
Q Consensus 215 ~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~ 274 (327)
.+..+|+|||| .|. |..++.|+++++..+. +||++. .+|.+.
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~--~rv~~~--~gD~~~------------- 239 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEE--EQIDFQ--EGDFFK------------- 239 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--C--CSEEEE--ESCTTT-------------
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhccc--Cceeee--cCcccc-------------
Confidence 45679999999 565 8899999999876553 678875 577530
Q ss_pred cccccccCCCCCCCeeEEEE-cCCh----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 275 LSSHKIRGISETEEYDVVIA-NILL----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 275 ~~~~~~~~~~~~~~fDlVvA-NIla----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
. +...+|+|+. |++. +....++..+++.|+|||++++...+
T Consensus 240 -------~--~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 240 -------D--PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp -------S--CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -------C--CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 0 1335798876 5654 23567889999999999988876543
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.41 E-value=0.00071 Score=62.27 Aligned_cols=71 Identities=14% Similarity=0.236 Sum_probs=47.7
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
..+|++|||+|| +|+|+.+++.+++|++. . .++++. .+|.... ++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~--~~v~~i--~~D~~~~-------~~---- 89 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--Q--KNITIY--QNDALQF-------DF---- 89 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--C--TTEEEE--ESCTTTC-------CG----
T ss_pred CCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--C--CCcEEE--EcchHhC-------CH----
Confidence 357889999999 99999999999999865 1 356664 5776310 00
Q ss_pred ccccccCCCCCCCeeEEEEcCChHHHHHHHHH
Q 041970 276 SSHKIRGISETEEYDVVIANILLNPLLQLADH 307 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~ 307 (327)
......++|| ||+|+...+-..++-.
T Consensus 90 -----~~~~~~~~~~-vv~NlPY~is~~il~~ 115 (255)
T 3tqs_A 90 -----SSVKTDKPLR-VVGNLPYNISTPLLFH 115 (255)
T ss_dssp -----GGSCCSSCEE-EEEECCHHHHHHHHHH
T ss_pred -----HHhccCCCeE-EEecCCcccCHHHHHH
Confidence 1111135788 9999987665444333
No 256
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.38 E-value=0.00033 Score=66.03 Aligned_cols=63 Identities=14% Similarity=0.294 Sum_probs=45.0
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
+.++++|||+|| ||+|+.+++.|++|++. . .++++. .+|.. ++
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~--~--~~v~vi--~gD~l---------~~---- 108 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL--Y--NNIEII--WGDAL---------KV---- 108 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--C--SSEEEE--ESCTT---------TS----
T ss_pred CCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--C--CCeEEE--ECchh---------hC----
Confidence 356789999999 99999999999999873 2 346664 46653 00
Q ss_pred ccccccCCCCCCCeeEEEEcCChHHHH
Q 041970 276 SSHKIRGISETEEYDVVIANILLNPLL 302 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~vL~ 302 (327)
.+ +..+||+|++|+...+-.
T Consensus 109 ------~~-~~~~fD~Iv~NlPy~is~ 128 (295)
T 3gru_A 109 ------DL-NKLDFNKVVANLPYQISS 128 (295)
T ss_dssp ------CG-GGSCCSEEEEECCGGGHH
T ss_pred ------Cc-ccCCccEEEEeCcccccH
Confidence 11 134699999998865433
No 257
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.38 E-value=0.00013 Score=63.42 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=30.4
Q ss_pred CCCeeEEEEcCCh--HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 286 TEEYDVVIANILL--NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 286 ~~~fDlVvANIla--~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
.++||+|+++-.. .....++..+.+.|+|||+++++..
T Consensus 113 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 113 DESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp TTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 5689999998543 2346778899999999999999754
No 258
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.36 E-value=3.5e-05 Score=71.83 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=27.1
Q ss_pred CCCeeEEEEcCC---h----HHH--HHHHHHHhhccCCCc--EEEEee
Q 041970 286 TEEYDVVIANIL---L----NPL--LQLADHIVSYAKPGA--VVGISG 322 (327)
Q Consensus 286 ~~~fDlVvANIl---a----~vL--~~L~p~i~~~LkpGG--~LIlSG 322 (327)
.++||+|++|.. . +.. ..+++.+.++||||| .|++.-
T Consensus 146 ~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 146 PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 568999999864 1 111 136788889999999 998853
No 259
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.33 E-value=0.00023 Score=75.74 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=46.7
Q ss_pred ecCCHHHHHHH--HHHHHhcCCCC--CcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH--
Q 041970 226 VDIDPQVIKSA--HQNAALNNIGP--KKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-- 299 (327)
Q Consensus 226 VDIDp~AV~~A--~eNa~lNgv~~--~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-- 299 (327)
+|||+.+++.| +.|+..|++.. +...+. .++.+ .. .....++||+||+|++..
T Consensus 354 vEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~--~dD~L---------~~----------~~~~~~kFDVVIgNPPYg~~ 412 (878)
T 3s1s_A 354 NDIETLFLELLSIRLGLLFPQLVSSNNAPTIT--GEDVC---------SL----------NPEDFANVSVVVMNPPYVSG 412 (878)
T ss_dssp ECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEE--CCCGG---------GC----------CGGGGTTEEEEEECCBCCSS
T ss_pred EECCHHHHHHHHHHHHHHHhhhhcCCCcceEE--ecchh---------cc----------cccccCCCCEEEECCCcccc
Confidence 89999999999 88988765531 111222 23321 00 001146899999998741
Q ss_pred ------------------------------HHHHHHHHHhhccCCCcEEEE
Q 041970 300 ------------------------------PLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 300 ------------------------------vL~~L~p~i~~~LkpGG~LIl 320 (327)
....++..+.++|+|||++.+
T Consensus 413 ~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 413 VTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp CCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred ccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 122356678889999998754
No 260
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.31 E-value=4e-05 Score=70.94 Aligned_cols=37 Identities=8% Similarity=0.155 Sum_probs=27.1
Q ss_pred CCCeeEEEEcCC---h----HHH--HHHHHHHhhccCCCc--EEEEee
Q 041970 286 TEEYDVVIANIL---L----NPL--LQLADHIVSYAKPGA--VVGISG 322 (327)
Q Consensus 286 ~~~fDlVvANIl---a----~vL--~~L~p~i~~~LkpGG--~LIlSG 322 (327)
.++||+|++|.. . +.. ..+++.+.++||||| .|++.-
T Consensus 138 ~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 138 VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 568999999864 1 111 136788889999999 998854
No 261
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.31 E-value=0.00016 Score=71.41 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=46.4
Q ss_pred hhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhc--CCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 213 LIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALN--NIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 213 ~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lN--gv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
.+.+|++|||+|| +|+|+.+++.|++|++.| |+ +++++. .+|.. +.+
T Consensus 90 ~l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i--~~Da~---------~~L 156 (410)
T 3ll7_A 90 FIREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG--KDVNIL--TGDFK---------EYL 156 (410)
T ss_dssp GSCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEE--ESCGG---------GSH
T ss_pred hcCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEE--ECcHH---------Hhh
Confidence 3445899999999 999999999999999998 87 357764 46652 111
Q ss_pred hhcccccccCCCCCCCeeEEEEcCC
Q 041970 273 EYLSSHKIRGISETEEYDVVIANIL 297 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~fDlVvANIl 297 (327)
. .. ..++||+|++|+.
T Consensus 157 ~--------~~-~~~~fDvV~lDPP 172 (410)
T 3ll7_A 157 P--------LI-KTFHPDYIYVDPA 172 (410)
T ss_dssp H--------HH-HHHCCSEEEECCE
T ss_pred h--------hc-cCCCceEEEECCC
Confidence 0 00 1247999999975
No 262
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.25 E-value=0.00021 Score=68.32 Aligned_cols=96 Identities=17% Similarity=0.227 Sum_probs=62.9
Q ss_pred cCCCchhhHHHHHHHH-Hhh--hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEE
Q 041970 195 FGTGEHATTKLCLLLL-RSL--IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMK 251 (327)
Q Consensus 195 FGTG~H~TT~lcLe~L-e~~--~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~ 251 (327)
|..+.+..++.....+ +.+ ..++.+|||+|| +|+ |.+++.|+++ .+++
T Consensus 185 f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------~~v~ 255 (372)
T 1fp1_D 185 FNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL--------SGIE 255 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEE
T ss_pred HHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc--------CCCE
Confidence 4444445554444433 443 345689999999 698 8888877642 2356
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCCCcEEEEeecc
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+. .+|.. ..+ . .||+|+++-..+ ....++..+.+.|||||+|++..+.
T Consensus 256 ~~--~~d~~--------------------~~~--~-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 256 HV--GGDMF--------------------ASV--P-QGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp EE--ECCTT--------------------TCC--C-CEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EE--eCCcc--------------------cCC--C-CCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 54 45542 011 2 399999975432 2347889999999999999987643
No 263
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.24 E-value=0.00023 Score=67.42 Aligned_cols=96 Identities=23% Similarity=0.324 Sum_probs=62.9
Q ss_pred cCCCchhhHHHHHHHHHhh---hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEE
Q 041970 195 FGTGEHATTKLCLLLLRSL---IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMK 251 (327)
Q Consensus 195 FGTG~H~TT~lcLe~Le~~---~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~ 251 (327)
|..+.+..++.....++.+ ..++.+|||+|| +|+ |.+++.|+++ . +++
T Consensus 164 f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~--~v~ 234 (352)
T 1fp2_A 164 FNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------N--NLT 234 (352)
T ss_dssp HHHHHHHTHHHHHHHHHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------T--TEE
T ss_pred HHHHHHhcchhhhhHHHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------C--CcE
Confidence 4444444444443334444 456789999999 899 9998887652 1 255
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCC---CcEEEEeec
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKP---GAVVGISGI 323 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~Lkp---GG~LIlSGI 323 (327)
+. .+|.+ ..+ . .||+|+++-..+ ....++..+.+.||| ||++++...
T Consensus 235 ~~--~~d~~--------------------~~~--p-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 235 YV--GGDMF--------------------TSI--P-NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EE--ECCTT--------------------TCC--C-CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred EE--ecccc--------------------CCC--C-CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 53 45542 011 2 399999875432 344788999999999 999988765
Q ss_pred c
Q 041970 324 L 324 (327)
Q Consensus 324 l 324 (327)
.
T Consensus 290 ~ 290 (352)
T 1fp2_A 290 V 290 (352)
T ss_dssp E
T ss_pred e
Confidence 3
No 264
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.22 E-value=0.00036 Score=66.85 Aligned_cols=96 Identities=18% Similarity=0.282 Sum_probs=60.6
Q ss_pred cCCCchhhHHHHHHHHHh-h--hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEE
Q 041970 195 FGTGEHATTKLCLLLLRS-L--IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMK 251 (327)
Q Consensus 195 FGTG~H~TT~lcLe~Le~-~--~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~ 251 (327)
|..+.+..++...+.+.+ + ..++.+|||||| +|+ |.+++.|+++ .+++
T Consensus 179 f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~ 249 (368)
T 3reo_A 179 FNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------SGVE 249 (368)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEE
T ss_pred HHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------CCCE
Confidence 333334444444443333 3 235679999999 888 8888776642 3566
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+. .+|.+ + .+ +. .|+|+++-.. .....++..+.+.|||||+|++..+.
T Consensus 250 ~~--~~d~~--------~------------~~-p~--~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 250 HL--GGDMF--------D------------GV-PK--GDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EE--ECCTT--------T------------CC-CC--CSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EE--ecCCC--------C------------CC-CC--CCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 64 46652 0 12 12 2999886433 23457889999999999999887654
No 265
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.22 E-value=0.00041 Score=66.42 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=61.5
Q ss_pred cCCCchhhHHHHHHHH-Hhh--hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEE
Q 041970 195 FGTGEHATTKLCLLLL-RSL--IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMK 251 (327)
Q Consensus 195 FGTG~H~TT~lcLe~L-e~~--~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~ 251 (327)
|..+.+..++.....+ +.+ ..++.+|||||| +|+ |.+++.|+++ .+++
T Consensus 177 f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~ 247 (364)
T 3p9c_A 177 FNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF--------PGVT 247 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEE
T ss_pred HHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc--------CCeE
Confidence 4444444444444433 333 245689999999 898 8888776542 3566
Q ss_pred EEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcC-Ch----HHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 252 LHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANI-LL----NPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 252 v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANI-la----~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+. .+|.+ ..++ . .|+|++.- +. +....++..+++.|||||+|++..++
T Consensus 248 ~~--~~D~~--------------------~~~p-~--~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 248 HV--GGDMF--------------------KEVP-S--GDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EE--ECCTT--------------------TCCC-C--CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EE--eCCcC--------------------CCCC-C--CCEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 64 46652 0121 2 29998753 32 34567899999999999999887654
No 266
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.20 E-value=0.00011 Score=67.61 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhhcCCCeeeeeee------------------ecCCH-------HHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041970 203 TKLCLLLLRSLIKGGELFLDYGT------------------VDIDP-------QVIKSAHQNAALNNIGPKKMKLHLVPD 257 (327)
Q Consensus 203 T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp-------~AV~~A~eNa~lNgv~~~~v~v~~~~~ 257 (327)
+.+..+++ ...+|.+|||+|| +|+++ .+++.|++|++.|++. +++++. .+
T Consensus 72 ~~~l~~a~--~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-~ri~~~--~~ 146 (258)
T 2r6z_A 72 GELIAKAV--NHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA-ARINLH--FG 146 (258)
T ss_dssp -CHHHHHT--TGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-TTEEEE--ES
T ss_pred hHHHHHHh--CcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-cCeEEE--EC
Confidence 44555554 2346789999999 99999 9999999999999986 467775 35
Q ss_pred CCCCCCccccccchhhhcccccccCCCCC--CCeeEEEEcCC
Q 041970 258 RTFPSSMNERVDGIVEYLSSHKIRGISET--EEYDVVIANIL 297 (327)
Q Consensus 258 d~~~~~~~g~~~~l~~~~~~~~~~~~~~~--~~fDlVvANIl 297 (327)
|.. +++. .+ .. ++||+|++|+.
T Consensus 147 d~~---------~~l~--------~~-~~~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 147 NAA---------EQMP--------AL-VKTQGKPDIVYLDPM 170 (258)
T ss_dssp CHH---------HHHH--------HH-HHHHCCCSEEEECCC
T ss_pred CHH---------HHHH--------hh-hccCCCccEEEECCC
Confidence 531 1110 01 12 57999999974
No 267
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.10 E-value=0.0018 Score=62.78 Aligned_cols=98 Identities=21% Similarity=0.218 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCC----CcEEEEecC
Q 041970 201 ATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGP----KKMKLHLVP 256 (327)
Q Consensus 201 ~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~----~~v~v~~~~ 256 (327)
+...+...+|. .++|++|||+++ +|+++.-++..++|+++.++.. ..+.+. .
T Consensus 135 ~aS~l~~~~L~--~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~--~ 210 (359)
T 4fzv_A 135 AASLLPVLALG--LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVT--S 210 (359)
T ss_dssp GGGHHHHHHHC--CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEE--C
T ss_pred HHHHHHHHHhC--CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEE--e
Confidence 55677777775 678999999998 8999999999999999887642 234443 3
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC---------------------------hHHHHHHHHHHh
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL---------------------------LNPLLQLADHIV 309 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl---------------------------a~vL~~L~p~i~ 309 (327)
.|.. .+. .. ..++||.|+.... +..-.+|+....
T Consensus 211 ~D~~---------~~~---------~~-~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~ 271 (359)
T 4fzv_A 211 WDGR---------KWG---------EL-EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGL 271 (359)
T ss_dssp CCGG---------GHH---------HH-STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHH
T ss_pred Cchh---------hcc---------hh-ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 3321 110 01 2568999998753 112246778889
Q ss_pred hccCCCcEEEEe
Q 041970 310 SYAKPGAVVGIS 321 (327)
Q Consensus 310 ~~LkpGG~LIlS 321 (327)
++|||||+|+.|
T Consensus 272 ~~lkpGG~LVYs 283 (359)
T 4fzv_A 272 LATKPGGHVVYS 283 (359)
T ss_dssp HTEEEEEEEEEE
T ss_pred hcCCCCcEEEEE
Confidence 999999999987
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.95 E-value=0.00087 Score=69.61 Aligned_cols=69 Identities=16% Similarity=0.243 Sum_probs=50.9
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NP 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~v 300 (327)
|+.+|.|. .|+++.+.|+.+ ++|+|. +++. +.+...+++|+||+=++- +-
T Consensus 391 VEknp~A~-~a~~~v~~N~~~-dkVtVI--~gd~---------------------eev~LPEKVDIIVSEwMG~fLl~E~ 445 (637)
T 4gqb_A 391 VEKNPNAV-VTLENWQFEEWG-SQVTVV--SSDM---------------------REWVAPEKADIIVSELLGSFADNEL 445 (637)
T ss_dssp EESCHHHH-HHHHHHHHHTTG-GGEEEE--ESCT---------------------TTCCCSSCEEEEECCCCBTTBGGGC
T ss_pred EECCHHHH-HHHHHHHhccCC-CeEEEE--eCcc---------------------eeccCCcccCEEEEEcCcccccccC
Confidence 89999875 688999999997 788875 5664 122336799999998753 22
Q ss_pred HHHHHHHHhhccCCCcEEE
Q 041970 301 LLQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 301 L~~L~p~i~~~LkpGG~LI 319 (327)
....+....++|||||.+|
T Consensus 446 mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 446 SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHHHGGGEEEEEEEE
T ss_pred CHHHHHHHHHhcCCCcEEc
Confidence 2345566789999999875
No 269
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.92 E-value=0.00092 Score=63.13 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=43.4
Q ss_pred hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhh
Q 041970 214 IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVE 273 (327)
Q Consensus 214 ~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~ 273 (327)
+++|.+|||+|| +|+|+.|++.|++|++.|+ +++++. .+|.. ++..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v--~~d~~---------~l~~ 89 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLF--KVSYR---------EADF 89 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEE--ECCGG---------GHHH
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEE--ECCHH---------HHHH
Confidence 346778888888 9999999999999999987 357764 45541 1110
Q ss_pred hcccccccCCCCCCCeeEEEEcCC
Q 041970 274 YLSSHKIRGISETEEYDVVIANIL 297 (327)
Q Consensus 274 ~~~~~~~~~~~~~~~fDlVvANIl 297 (327)
.. ... ...+||.|++|+.
T Consensus 90 ~l-----~~~-g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 90 LL-----KTL-GIEKVDGILMDLG 107 (301)
T ss_dssp HH-----HHT-TCSCEEEEEEECS
T ss_pred HH-----Hhc-CCCCCCEEEEcCc
Confidence 00 000 1257999999984
No 270
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.84 E-value=0.0053 Score=55.45 Aligned_cols=49 Identities=10% Similarity=0.205 Sum_probs=34.9
Q ss_pred HHHHHHHhhh--cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 205 LCLLLLRSLI--KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 205 lcLe~Le~~~--~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
..++.+-+.+ .++++|||+|| +|+|+.+++.|++|++.+ +++++. .+|.
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~--~~D~ 85 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH----DNFQVL--NKDI 85 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC----CSEEEE--CCCG
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC----CCeEEE--EChH
Confidence 3444444433 46789999999 999999999999998642 346664 5665
No 271
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.80 E-value=0.0044 Score=62.74 Aligned_cols=53 Identities=13% Similarity=0.261 Sum_probs=36.4
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL 298 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla 298 (327)
+|+|+.+++.|+-|+.++|++..++. .+|.+.. .. .......+||+||+|++.
T Consensus 260 ~E~~~~~~~la~mNl~lhg~~~~~I~----~~dtL~~-------~~---------~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 260 GEAKSLPYLLVQMNLLLHGLEYPRID----PENSLRF-------PL---------REMGDKDRVDVILTNPPF 312 (530)
T ss_dssp ECCSHHHHHHHHHHHHHHTCSCCEEE----CSCTTCS-------CG---------GGCCGGGCBSEEEECCCS
T ss_pred hhccHHHHHHHHHHHHhcCCcccccc----ccccccC-------ch---------hhhcccccceEEEecCCC
Confidence 89999999999999999998744443 4564310 00 001124579999999974
No 272
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.77 E-value=0.00092 Score=63.32 Aligned_cols=83 Identities=23% Similarity=0.288 Sum_probs=56.4
Q ss_pred HHHHhh---hcCCCeeeeeee--------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCc
Q 041970 208 LLLRSL---IKGGELFLDYGT--------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSM 264 (327)
Q Consensus 208 e~Le~~---~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~ 264 (327)
.+++.+ ..++.+|||||| +|+ |.+++.|++ .. ++++. .+|.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~--~v~~~--~~d~~---- 246 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NE--NLNFV--GGDMF---- 246 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CS--SEEEE--ECCTT----
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CC--CcEEE--eCccC----
Confidence 455554 356789999999 698 788876654 12 35553 45542
Q ss_pred cccccchhhhcccccccCCCCCCCeeEEEEcCChH-----HHHHHHHHHhhccCC---CcEEEEeecc
Q 041970 265 NERVDGIVEYLSSHKIRGISETEEYDVVIANILLN-----PLLQLADHIVSYAKP---GAVVGISGIL 324 (327)
Q Consensus 265 ~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~-----vL~~L~p~i~~~Lkp---GG~LIlSGIl 324 (327)
..+ ..||+|+++-..+ ....++..+.+.|+| ||++++....
T Consensus 247 ----------------~~~---~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 247 ----------------KSI---PSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp ----------------TCC---CCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred ----------------CCC---CCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 011 2499999875432 245788999999999 9999886543
No 273
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.76 E-value=9.5e-05 Score=66.69 Aligned_cols=79 Identities=13% Similarity=0.298 Sum_probs=53.0
Q ss_pred cCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcc
Q 041970 215 KGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLS 276 (327)
Q Consensus 215 ~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~ 276 (327)
.++++|||+|| +|+|+.+++.|++|++. .+++++ ..+|.. ++
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~----~~~v~~--~~~D~~---------~~----- 87 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL----NTRVTL--IHQDIL---------QF----- 87 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT----CSEEEE--CCSCCT---------TT-----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc----CCceEE--EECChh---------hc-----
Confidence 56789999999 99999999999998762 135665 356652 10
Q ss_pred cccccCCCCCCCeeEEEEcCCh----HHHHHHH--------------HHHhhccCCCcEEE
Q 041970 277 SHKIRGISETEEYDVVIANILL----NPLLQLA--------------DHIVSYAKPGAVVG 319 (327)
Q Consensus 277 ~~~~~~~~~~~~fDlVvANIla----~vL~~L~--------------p~i~~~LkpGG~LI 319 (327)
.+...++| .|++|+.. ..+..++ ..+.+.|+|||.|.
T Consensus 88 -----~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~ 142 (245)
T 1yub_A 88 -----QFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLG 142 (245)
T ss_dssp -----TCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHH
T ss_pred -----CcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchh
Confidence 11112578 89999753 3344443 44778888988754
No 274
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.43 E-value=0.0044 Score=65.11 Aligned_cols=75 Identities=12% Similarity=0.185 Sum_probs=49.3
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NP 300 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~v 300 (327)
||.+|.|+...+...+ |+.+ ++|++. .++. .++.-+. .....+++|+||+=.+. +.
T Consensus 452 VEknp~A~~~l~~~~~-Ng~~-d~VtVI--~gd~---------eev~lp~------~~~~~ekVDIIVSElmGsfl~nEL 512 (745)
T 3ua3_A 452 VEKNPNAIVTLKYMNV-RTWK-RRVTII--ESDM---------RSLPGIA------KDRGFEQPDIIVSELLGSFGDNEL 512 (745)
T ss_dssp EECCHHHHHHHHHHHH-HTTT-TCSEEE--ESCG---------GGHHHHH------HHTTCCCCSEEEECCCBTTBGGGS
T ss_pred EeCChHHHHHHHHHHh-cCCC-CeEEEE--eCch---------hhccccc------ccCCCCcccEEEEeccccccchhc
Confidence 7888988876665443 9997 678874 4554 2221000 00014789999998874 23
Q ss_pred HHHHHHHHhhccCCCcEEE
Q 041970 301 LLQLADHIVSYAKPGAVVG 319 (327)
Q Consensus 301 L~~L~p~i~~~LkpGG~LI 319 (327)
..+++..+.++|||||.+|
T Consensus 513 ~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 513 SPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHTTGGGSCTTCEEE
T ss_pred cHHHHHHHHHhCCCCcEEE
Confidence 4467777789999999875
No 275
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=96.33 E-value=0.014 Score=53.18 Aligned_cols=68 Identities=12% Similarity=0.282 Sum_probs=44.1
Q ss_pred cCCCeeeeeee-------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 215 KGGELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 215 ~~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
.++++|||+|| +|+|+.+++.+++| .. .++++. .+|... -++
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~---~~v~~i--~~D~~~-------~~~---- 90 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GD---ERLEVI--NEDASK-------FPF---- 90 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CC---TTEEEE--CSCTTT-------CCG----
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cC---CCeEEE--Ecchhh-------CCh----
Confidence 46789999999 99999999999988 21 346654 577631 000
Q ss_pred ccccccCCCCCCCeeEEEEcCChHHHHHHHHHHh
Q 041970 276 SSHKIRGISETEEYDVVIANILLNPLLQLADHIV 309 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~vL~~L~p~i~ 309 (327)
... ..+| .|++|+...+-..++-.+.
T Consensus 91 -----~~~--~~~~-~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 91 -----CSL--GKEL-KVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp -----GGS--CSSE-EEEEECCTTTHHHHHHHHH
T ss_pred -----hHc--cCCc-EEEEECchhccHHHHHHHH
Confidence 011 1244 8999998765554444433
No 276
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.16 E-value=0.0054 Score=56.96 Aligned_cols=60 Identities=12% Similarity=0.102 Sum_probs=41.6
Q ss_pred hcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhc
Q 041970 214 IKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYL 275 (327)
Q Consensus 214 ~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~ 275 (327)
+.+| +|||+|| +|+|+.+++.+++|+.. .++++. .+|.+ ++
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~-----~~v~vi--~~D~l---------~~---- 103 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG-----LPVRLV--FQDAL---------LY---- 103 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT-----SSEEEE--ESCGG---------GS----
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC-----CCEEEE--ECChh---------hC----
Confidence 3567 9999999 99999999999999752 346664 56753 10
Q ss_pred ccccccCCCCCCCeeEEEEcCChHH
Q 041970 276 SSHKIRGISETEEYDVVIANILLNP 300 (327)
Q Consensus 276 ~~~~~~~~~~~~~fDlVvANIla~v 300 (327)
.+.....+|.|++|+...+
T Consensus 104 ------~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 104 ------PWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp ------CGGGSCTTEEEEEEECSSC
T ss_pred ------ChhhccCccEEEecCcccc
Confidence 0111136899999986543
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.87 E-value=0.02 Score=54.07 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=68.7
Q ss_pred eEEEccCcccCCCc-hhhHHHHHHHHHhhhcCCCeeeeeee--------------------ecCCHHHHHHHHHHHH-hc
Q 041970 186 NIILNPGLAFGTGE-HATTKLCLLLLRSLIKGGELFLDYGT--------------------VDIDPQVIKSAHQNAA-LN 243 (327)
Q Consensus 186 ~I~idPG~AFGTG~-H~TT~lcLe~Le~~~~~g~~VLDvGc--------------------VDIDp~AV~~A~eNa~-lN 243 (327)
.+.||--+=+-.-. +.-+.|+.-.--..-...++||=+|- |||||..|+.|++-.. .|
T Consensus 52 ~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~ 131 (294)
T 3o4f_A 52 VMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHN 131 (294)
T ss_dssp EEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHH
T ss_pred EEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccc
Confidence 35555443332222 34444443322222233467777776 9999999999999753 33
Q ss_pred C--CCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-----HHH--HHHHHHHhhccCC
Q 041970 244 N--IGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-----NPL--LQLADHIVSYAKP 314 (327)
Q Consensus 244 g--v~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-----~vL--~~L~p~i~~~Lkp 314 (327)
+ .+..|++++. +|.. +.++ ...++||+|+....- ..| .+....+.++|+|
T Consensus 132 ~~~~~dpRv~v~~--~Dg~---------~~l~----------~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p 190 (294)
T 3o4f_A 132 AGSYDDPRFKLVI--DDGV---------NFVN----------QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNP 190 (294)
T ss_dssp TTGGGCTTEEEEE--SCTT---------TTTS----------CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEE
T ss_pred ccccCCCcEEEEe--chHH---------HHHh----------hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCC
Confidence 3 3346788764 5542 1110 125689999988642 111 3567789999999
Q ss_pred CcEEEE
Q 041970 315 GAVVGI 320 (327)
Q Consensus 315 GG~LIl 320 (327)
||.++.
T Consensus 191 ~Gv~v~ 196 (294)
T 3o4f_A 191 GGIFVA 196 (294)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 999886
No 278
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.79 E-value=0.0079 Score=54.80 Aligned_cols=48 Identities=21% Similarity=0.208 Sum_probs=38.1
Q ss_pred Cchhh---HHHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCC
Q 041970 198 GEHAT---TKLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNI 245 (327)
Q Consensus 198 G~H~T---T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv 245 (327)
+.||| ..|+-++|+.+..+|+.|||..| +|+++.+++.|++|++.|++
T Consensus 191 ~~~~~~~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 191 LTHITPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp ----CCCCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred cCCCCCCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 56999 68888888888889999999999 99999999999999998875
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=95.68 E-value=0.0026 Score=58.79 Aligned_cols=61 Identities=18% Similarity=0.282 Sum_probs=39.2
Q ss_pred cCC--Ceeeeeee------------------ecCCHHHHHHHHHH-------HHhcC-CCCCcEEEEecCCCCCCCCccc
Q 041970 215 KGG--ELFLDYGT------------------VDIDPQVIKSAHQN-------AALNN-IGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 215 ~~g--~~VLDvGc------------------VDIDp~AV~~A~eN-------a~lNg-v~~~~v~v~~~~~d~~~~~~~g 266 (327)
++| .+|||+|| ||+++.+.+.+++| ++.|+ +. +++++. .+|..
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~-~~i~~~--~~D~~------ 155 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQ-ERLQLI--HASSL------ 155 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHH-HHEEEE--ESCHH------
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhh-cCEEEE--ECCHH------
Confidence 567 89999999 99999765555555 44455 43 457764 45531
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcCC
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANIL 297 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl 297 (327)
+++ ... ..+||+|+.|+.
T Consensus 156 ---~~L--------~~~--~~~fDvV~lDP~ 173 (258)
T 2oyr_A 156 ---TAL--------TDI--TPRPQVVYLDPM 173 (258)
T ss_dssp ---HHS--------TTC--SSCCSEEEECCC
T ss_pred ---HHH--------HhC--cccCCEEEEcCC
Confidence 111 111 237999999984
No 280
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.67 E-value=0.0072 Score=56.18 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=36.7
Q ss_pred CCCchhhH---HHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhc
Q 041970 196 GTGEHATT---KLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALN 243 (327)
Q Consensus 196 GTG~H~TT---~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lN 243 (327)
+.+.|||+ .++-++++.+..+|+.|||.|| +|+++.+++.|++|++..
T Consensus 212 ~~~~h~~~~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 212 STKDHPAPFPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp ------CCSCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45679986 6777777776678999999999 999999999999998765
No 281
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=95.65 E-value=0.047 Score=50.72 Aligned_cols=70 Identities=24% Similarity=0.373 Sum_probs=43.5
Q ss_pred cCCCeeeeeee----------------------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchh
Q 041970 215 KGGELFLDYGT----------------------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIV 272 (327)
Q Consensus 215 ~~g~~VLDvGc----------------------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~ 272 (327)
.++++|||+|| +|+|+.+++.|++|+ . .++++. .+|.. ++
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~-~~v~~i--~~D~~---------~~- 102 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----G-ELLELH--AGDAL---------TF- 102 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----G-GGEEEE--ESCGG---------GC-
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----C-CCcEEE--ECChh---------cC-
Confidence 45677888888 799999999999994 1 346664 46753 00
Q ss_pred hhcccccccCCCC--CCCeeEEEEcCChHHHHHHHHHH
Q 041970 273 EYLSSHKIRGISE--TEEYDVVIANILLNPLLQLADHI 308 (327)
Q Consensus 273 ~~~~~~~~~~~~~--~~~fDlVvANIla~vL~~L~p~i 308 (327)
+...... ....+.||+|+...+-..++-.+
T Consensus 103 ------~~~~~~~~~~~~~~~vv~NlPY~iss~il~~l 134 (279)
T 3uzu_A 103 ------DFGSIARPGDEPSLRIIGNLPYNISSPLLFHL 134 (279)
T ss_dssp ------CGGGGSCSSSSCCEEEEEECCHHHHHHHHHHH
T ss_pred ------ChhHhcccccCCceEEEEccCccccHHHHHHH
Confidence 0001100 01346899999877655554443
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.52 E-value=0.05 Score=50.90 Aligned_cols=72 Identities=8% Similarity=0.043 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh-HHHHHHHHHHhh
Q 041970 232 VIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL-NPLLQLADHIVS 310 (327)
Q Consensus 232 AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla-~vL~~L~p~i~~ 310 (327)
.++.+++|++..|+..+++++. .|+.. +.+ ... ..++||+|...--. ......+..+..
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li--~Gda~---------etL--------~~~-~~~~~d~vfIDaD~y~~~~~~Le~~~p 232 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFL--PGWFK---------DTL--------PTA-PIDTLAVLRMDGDLYESTWDTLTNLYP 232 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEE--ESCHH---------HHS--------TTC-CCCCEEEEEECCCSHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHcCCCcCceEEE--EeCHH---------HHH--------hhC-CCCCEEEEEEcCCccccHHHHHHHHHh
Confidence 4788999999999854678875 46642 211 112 24689999976533 455677888999
Q ss_pred ccCCCcEEEEeec
Q 041970 311 YAKPGAVVGISGI 323 (327)
Q Consensus 311 ~LkpGG~LIlSGI 323 (327)
+|+|||++++-.+
T Consensus 233 ~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 233 KVSVGGYVIVDDY 245 (282)
T ss_dssp GEEEEEEEEESSC
T ss_pred hcCCCEEEEEcCC
Confidence 9999999988654
No 283
>3cjs_A L11 mtase, ribosomal protein L11 methyltransferase; S-adenosyl-L-methionine dependent methyltransferase; 1.37A {Thermus thermophilus}
Probab=95.35 E-value=0.029 Score=40.52 Aligned_cols=56 Identities=20% Similarity=0.103 Sum_probs=40.7
Q ss_pred EEEEeCCchHHHHHHHHHhcCCceEEEEcCCCCCCCCCCcEEEEEEcCCCCCHHHHHHhhhhhcCCCCCCcceeeeccch
Q 041970 76 VRICCQKHALDMFSEAPLCFGASSTSVDEHDNDADENSDEIYIDSIFPECKDVDECILNTANSIGLKEIPRYEVKMGEQC 155 (327)
Q Consensus 76 i~i~~~~e~~d~v~~~L~e~Ga~gv~ied~~~~~~~~~~~~~v~ayfp~~~~~~~~l~~~~~~~~l~~~~~~~~~~~ee~ 155 (327)
.++..+.+..|+....|.+.||.|+...+. .|.+|||+..++. . .=+++..+|+
T Consensus 4 ~~l~gt~e~~ea~~~~L~e~GA~Gleer~g-----------ev~ayF~~~~dlp--------------~-~gew~e~pD~ 57 (59)
T 3cjs_A 4 YRLKGTLEALDPILPGLFDGGARGLWEREG-----------EVWAFFPAPVDLP--------------Y-EGVWEEVGDE 57 (59)
T ss_dssp EEEESCTTTTGGGHHHHHHTTCCEEEEETT-----------EEEEEESSCCCCS--------------S-CCEEEECCCC
T ss_pred EEecCChHHhhhhhHHHHHhcCCcceecCC-----------eEEEEcCCcccCC--------------C-CceecccCCC
Confidence 467788888899999999999999975431 3889999875432 1 1156667788
Q ss_pred hh
Q 041970 156 NW 157 (327)
Q Consensus 156 DW 157 (327)
||
T Consensus 58 DW 59 (59)
T 3cjs_A 58 DW 59 (59)
T ss_dssp -C
T ss_pred CC
Confidence 98
No 284
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.30 E-value=0.023 Score=51.96 Aligned_cols=28 Identities=11% Similarity=0.292 Sum_probs=21.2
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCC
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRT 259 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~ 259 (327)
+|+|+.+++.+++|++.+ .++++. .+|.
T Consensus 49 vEid~~~~~~a~~~~~~~----~~v~~i--~~D~ 76 (252)
T 1qyr_A 49 IELDRDLAARLQTHPFLG----PKLTIY--QQDA 76 (252)
T ss_dssp ECCCHHHHHHHHTCTTTG----GGEEEE--CSCG
T ss_pred EECCHHHHHHHHHHhccC----CceEEE--ECch
Confidence 899999999999987543 246654 5775
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=94.24 E-value=0.057 Score=52.75 Aligned_cols=87 Identities=18% Similarity=0.191 Sum_probs=55.0
Q ss_pred CCCeeeeeee-------------------ecCCHHHHHHHHHHHHh-cC--CC---CCcEEEEecCCCCCCCCccccccc
Q 041970 216 GGELFLDYGT-------------------VDIDPQVIKSAHQNAAL-NN--IG---PKKMKLHLVPDRTFPSSMNERVDG 270 (327)
Q Consensus 216 ~g~~VLDvGc-------------------VDIDp~AV~~A~eNa~l-Ng--v~---~~~v~v~~~~~d~~~~~~~g~~~~ 270 (327)
+.++||=+|- |||||..|+.|++.... ++ .+ .+++++.. +|.. +
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii--~Da~---------~ 273 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLI--EDCI---------P 273 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEE--SCHH---------H
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeeh--HHHH---------H
Confidence 4578888887 99999999999986421 11 11 13566653 4531 1
Q ss_pred hhhhcccccccCCCCCCCeeEEEEcCCh-----------H--HHHHHHHHHhhccCCCcEEEE
Q 041970 271 IVEYLSSHKIRGISETEEYDVVIANILL-----------N--PLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 271 l~~~~~~~~~~~~~~~~~fDlVvANIla-----------~--vL~~L~p~i~~~LkpGG~LIl 320 (327)
.++. .....++||+|+..... . .-.+....+.++|+|||.++.
T Consensus 274 fl~~-------~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 274 VLKR-------YAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp HHHH-------HHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHh-------hhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1110 00114689999988532 1 124567788999999999986
No 286
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.50 E-value=0.63 Score=44.66 Aligned_cols=68 Identities=15% Similarity=0.060 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCCh--HHHHHHHH
Q 041970 229 DPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILL--NPLLQLAD 306 (327)
Q Consensus 229 Dp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla--~vL~~L~p 306 (327)
+-.+-..++.|++.|+++.+.+.+.- .. +. ..+.||+|+--+.. ..+...+.
T Consensus 67 s~~~~~~~~~n~~~~~~~~~~~~~~~---~~---------------------~~--~~~~~~~v~~~lpk~~~~l~~~L~ 120 (375)
T 4dcm_A 67 SYISELATRENLRLNGIDESSVKFLD---ST---------------------AD--YPQQPGVVLIKVPKTLALLEQQLR 120 (375)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGSEEEE---TT---------------------SC--CCSSCSEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccceEecc---cc---------------------cc--cccCCCEEEEEcCCCHHHHHHHHH
Confidence 77788888999999999865566531 10 01 15679999988764 45666778
Q ss_pred HHhhccCCCcEEEEee
Q 041970 307 HIVSYAKPGAVVGISG 322 (327)
Q Consensus 307 ~i~~~LkpGG~LIlSG 322 (327)
.+...|+||+.++..|
T Consensus 121 ~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 121 ALRKVVTSDTRIIAGA 136 (375)
T ss_dssp HHHTTCCTTSEEEEEE
T ss_pred HHHhhCCCCCEEEEEe
Confidence 8999999999998776
No 287
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.58 E-value=0.11 Score=50.31 Aligned_cols=21 Identities=10% Similarity=0.099 Sum_probs=17.2
Q ss_pred HHHHHHhhccCCCcEEEEeec
Q 041970 303 QLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 303 ~L~p~i~~~LkpGG~LIlSGI 323 (327)
.++...++.|+|||+++++-.
T Consensus 206 ~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 206 EFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEe
Confidence 356677999999999998754
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=91.38 E-value=0.38 Score=43.99 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=26.8
Q ss_pred CCeeEEEEcCChH------HHHHHHHHHhhccCCCcEEEE
Q 041970 287 EEYDVVIANILLN------PLLQLADHIVSYAKPGAVVGI 320 (327)
Q Consensus 287 ~~fDlVvANIla~------vL~~L~p~i~~~LkpGG~LIl 320 (327)
.+||+|+-...+. .-..++..++++|+|||+|+.
T Consensus 172 ~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 172 QKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp TCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred CeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 3799999886431 135688899999999999986
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=89.63 E-value=0.34 Score=45.47 Aligned_cols=74 Identities=18% Similarity=0.303 Sum_probs=42.1
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeeeecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGTVDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGcVDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
+++|-+ ||.|.| |+..++. +.+|+ | +|.||.|++.|++ ++. +++.+. +++..
T Consensus 25 ~~VD~T--~G~GGH--S~~il~~-------~g~Vi--g-iD~Dp~Ai~~A~~-L~~-----~rv~lv--~~~f~------ 76 (285)
T 1wg8_A 25 VYVDAT--LGGAGH--ARGILER-------GGRVI--G-LDQDPEAVARAKG-LHL-----PGLTVV--QGNFR------ 76 (285)
T ss_dssp EEEETT--CTTSHH--HHHHHHT-------TCEEE--E-EESCHHHHHHHHH-TCC-----TTEEEE--ESCGG------
T ss_pred EEEEeC--CCCcHH--HHHHHHC-------CCEEE--E-EeCCHHHHHHHHh-hcc-----CCEEEE--ECCcc------
Confidence 556654 788888 3433332 22331 1 8999999999998 533 367664 45531
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcCC
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANIL 297 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl 297 (327)
..++.+. .. ...++|.|++|+-
T Consensus 77 ~l~~~L~--------~~-g~~~vDgIL~DLG 98 (285)
T 1wg8_A 77 HLKRHLA--------AL-GVERVDGILADLG 98 (285)
T ss_dssp GHHHHHH--------HT-TCSCEEEEEEECS
T ss_pred hHHHHHH--------Hc-CCCCcCEEEeCCc
Confidence 1111111 11 1257999999974
No 290
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=89.49 E-value=0.26 Score=46.18 Aligned_cols=37 Identities=30% Similarity=0.401 Sum_probs=31.2
Q ss_pred CCeeEEEEcCC--------------hHHHHHHHHHHhhccCCCcEEEEeec
Q 041970 287 EEYDVVIANIL--------------LNPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 287 ~~fDlVvANIl--------------a~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++||+|+.|+- |--+..|..+...+|+|||.+++.|.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 78999999995 23456788899999999999998863
No 291
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=89.38 E-value=0.23 Score=46.21 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=23.7
Q ss_pred CCCeeEEEEcCCh-------H---HHHHHHHHHhhccCCCc-EEEE
Q 041970 286 TEEYDVVIANILL-------N---PLLQLADHIVSYAKPGA-VVGI 320 (327)
Q Consensus 286 ~~~fDlVvANIla-------~---vL~~L~p~i~~~LkpGG-~LIl 320 (327)
..++|+|++.+-. + .+. .+.-+.++|+||| .|++
T Consensus 137 ~~~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 137 SEISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEE
T ss_pred CCCCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEE
Confidence 4589999999842 1 222 3445568999999 7765
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=88.95 E-value=0.14 Score=48.12 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.2
Q ss_pred CCCeeEEEEcCChH-------H--HHHHHHHHhhccCCC--cEEEEe
Q 041970 286 TEEYDVVIANILLN-------P--LLQLADHIVSYAKPG--AVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-------v--L~~L~p~i~~~LkpG--G~LIlS 321 (327)
..++|+|++.+..+ . ...|+.-+...|+|| |.|++.
T Consensus 154 ~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 154 VIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 57899999998643 1 224566678899999 999874
No 293
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=88.28 E-value=0.23 Score=41.70 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=28.1
Q ss_pred CCeeEEEEcCCh--------HH------HHHHHHHHhhccCCCcEEEEeec
Q 041970 287 EEYDVVIANILL--------NP------LLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 287 ~~fDlVvANIla--------~v------L~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++||+|++|... +. ...++..+.+.|||||+|+++-.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 579999997621 11 14678889999999999998743
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=87.78 E-value=0.43 Score=40.90 Aligned_cols=19 Identities=11% Similarity=0.174 Sum_probs=13.0
Q ss_pred HHHHHhhhcCCCeeeeeee
Q 041970 207 LLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 207 Le~Le~~~~~g~~VLDvGc 225 (327)
.++|.+...++.+||||||
T Consensus 26 aeYI~~~~~~~~rVlEVG~ 44 (153)
T 2k4m_A 26 AVYIIRCSGPGTRVVEVGA 44 (153)
T ss_dssp HHHHHHHSCSSSEEEEETC
T ss_pred HHHHHhcCCCCCcEEEEcc
Confidence 3344444456679999999
No 295
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=85.48 E-value=1.7 Score=42.28 Aligned_cols=13 Identities=23% Similarity=0.409 Sum_probs=11.5
Q ss_pred hhcCCCeeeeeee
Q 041970 213 LIKGGELFLDYGT 225 (327)
Q Consensus 213 ~~~~g~~VLDvGc 225 (327)
.+++|++|||+||
T Consensus 208 ~l~~G~~vlDLGA 220 (375)
T 4auk_A 208 RLANGMWAVDLGA 220 (375)
T ss_dssp HSCTTCEEEEETC
T ss_pred cCCCCCEEEEeCc
Confidence 4678999999999
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.75 E-value=0.5 Score=44.32 Aligned_cols=51 Identities=24% Similarity=0.354 Sum_probs=43.2
Q ss_pred cCCCchhhH---HHHHHHHHhhhcCCCeeeeeee------------------ecCCHHHHHHHHHHHHhcCC
Q 041970 195 FGTGEHATT---KLCLLLLRSLIKGGELFLDYGT------------------VDIDPQVIKSAHQNAALNNI 245 (327)
Q Consensus 195 FGTG~H~TT---~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp~AV~~A~eNa~lNgv 245 (327)
+|.+.|||. .++-++++....+|+.|||--| +|++|.+++.|+++++..+.
T Consensus 228 ~~~~~~~~~kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 228 MGIKAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp TTCCCCSSCCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred cCCCCCCCcCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 577789995 7887788777789999999888 99999999999999866554
No 297
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=82.56 E-value=1.1 Score=45.89 Aligned_cols=41 Identities=22% Similarity=0.365 Sum_probs=32.1
Q ss_pred CCCCCCeeEEEEcCCh--------------HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 283 ISETEEYDVVIANILL--------------NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 283 ~~~~~~fDlVvANIla--------------~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++..++||+|+.|+-. --+..|..+...+|+|||.+++.|.
T Consensus 216 ~p~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~Y 270 (670)
T 4gua_A 216 FPPQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSY 270 (670)
T ss_dssp CCCCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCCCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEe
Confidence 3345799999999953 2345677889999999999998763
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=81.07 E-value=3.8 Score=39.72 Aligned_cols=19 Identities=5% Similarity=-0.251 Sum_probs=15.4
Q ss_pred HHHHhhccCCCcEEEEeec
Q 041970 305 ADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 305 ~p~i~~~LkpGG~LIlSGI 323 (327)
+...++.|+|||+++++-.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhccCCeEEEEEe
Confidence 4555899999999998854
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=80.14 E-value=1.2 Score=40.89 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=28.0
Q ss_pred CCCeeEEEEcCChH-----------------------HHHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILLN-----------------------PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-----------------------vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.++||+||+|+... .+..++..+.++|||||.+++.
T Consensus 38 ~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 38 EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 57899999998631 1345677889999999998775
No 300
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=75.70 E-value=10 Score=34.77 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=74.3
Q ss_pred eEEEcCcEEEEcCCC-----CCceeEEEccCcccCC---CchhhH-HHHHHHHHhh--hcCCCeeeeeee----------
Q 041970 167 PVEVTKGLWIVPEWN-----VQATNIILNPGLAFGT---GEHATT-KLCLLLLRSL--IKGGELFLDYGT---------- 225 (327)
Q Consensus 167 P~~vg~~l~I~P~W~-----~~~~~I~idPG~AFGT---G~H~TT-~lcLe~Le~~--~~~g~~VLDvGc---------- 225 (327)
.+++|+|.+....|. +....+.+.+++.+=. ..-+.. ..++..|.+. +++|++||-.|+
T Consensus 89 ~~~vGdrV~~~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~ 168 (336)
T 4b7c_A 89 GFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQ 168 (336)
T ss_dssp TCCTTCEEEEECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHH
T ss_pred CCCCCCEEeccCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 345788888777775 2334577777773221 222111 2233444332 578999999998
Q ss_pred -----------ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEE
Q 041970 226 -----------VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIA 294 (327)
Q Consensus 226 -----------VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvA 294 (327)
+|.++...+.+. +..|.. .+ +. ..+. ...+.+. ... .+.+|+|+-
T Consensus 169 ~a~~~Ga~Vi~~~~~~~~~~~~~---~~~g~~--~~-~~--~~~~------~~~~~~~---------~~~-~~~~d~vi~ 224 (336)
T 4b7c_A 169 IARLKGCRVVGIAGGAEKCRFLV---EELGFD--GA-ID--YKNE------DLAAGLK---------REC-PKGIDVFFD 224 (336)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHH---HTTCCS--EE-EE--TTTS------CHHHHHH---------HHC-TTCEEEEEE
T ss_pred HHHHCCCEEEEEeCCHHHHHHHH---HHcCCC--EE-EE--CCCH------HHHHHHH---------Hhc-CCCceEEEE
Confidence 777777665552 222332 11 11 1110 0111111 111 347999998
Q ss_pred cCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 295 NILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 295 NIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
|.-.. .+....+.|++||++++-|...
T Consensus 225 ~~g~~----~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 225 NVGGE----ILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp SSCHH----HHHHHHTTEEEEEEEEECCCGG
T ss_pred CCCcc----hHHHHHHHHhhCCEEEEEeecc
Confidence 87643 4567778999999999988654
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=73.67 E-value=37 Score=31.45 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=67.8
Q ss_pred CchhhHHHHHHHHHhhhcCC-Ceeeeeee-------------------ecCCHHHHHHHHHHHHhcCCC-CCcEEEEecC
Q 041970 198 GEHATTKLCLLLLRSLIKGG-ELFLDYGT-------------------VDIDPQVIKSAHQNAALNNIG-PKKMKLHLVP 256 (327)
Q Consensus 198 G~H~TT~lcLe~Le~~~~~g-~~VLDvGc-------------------VDIDp~AV~~A~eNa~lNgv~-~~~v~v~~~~ 256 (327)
|.---|+.+-+++.+++..| +.|+++|| || +|..++..++-++.++.. .++..+ +.
T Consensus 83 ~~~~Rt~~~d~~v~~~~~~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~--v~ 159 (310)
T 2uyo_A 83 YQAVRTNFFDTYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRRE--VP 159 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEE--EE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEE--Ee
Confidence 33445566666777666544 68999999 67 588888888877655432 234443 35
Q ss_pred CCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCC-----hHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 257 DRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANIL-----LNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 257 ~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIl-----a~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
.|+.. .+.+.+.. ..+. ..+--++++--+ .+-...++..+...+.||+.++++=+-
T Consensus 160 ~Dl~d----~~~~~l~~-------~g~d-~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 160 IDLRQ----DWPPALRS-------AGFD-PSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CCTTS----CHHHHHHH-------TTCC-TTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred cchHh----hHHHHHHh-------ccCC-CCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 66531 12221110 1121 223456666643 245677888999989999999987543
No 302
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=72.07 E-value=12 Score=34.15 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.9
Q ss_pred CCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 287 EEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 287 ~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
+.+|+|+.|.-.. .+....+.|++||++++-|..
T Consensus 213 ~~~d~vi~~~g~~----~~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 213 DGYDCYFDNVGGE----FLNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp TCEEEEEESSCHH----HHHHHHTTEEEEEEEEECCCC
T ss_pred CCCeEEEECCChH----HHHHHHHHHhcCCEEEEEecc
Confidence 4799999987643 356677889999999988864
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=70.75 E-value=5.3 Score=37.30 Aligned_cols=73 Identities=7% Similarity=0.075 Sum_probs=46.6
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccccccchhhhcccccccCCCCCCCeeEEEEcCChH---HHH
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNERVDGIVEYLSSHKIRGISETEEYDVVIANILLN---PLL 302 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~fDlVvANIla~---vL~ 302 (327)
||.++.+++.-++|++. . +++++. ..|.+ ..+. ....+..+||+|+..+..+ .+.
T Consensus 119 vE~~~~a~~~L~~Nl~~---~-~~~~V~--~~D~~---------~~L~-------~l~~~~~~fdLVfiDPPYe~k~~~~ 176 (283)
T 2oo3_A 119 CELHPTEYNFLLKLPHF---N-KKVYVN--HTDGV---------SKLN-------ALLPPPEKRGLIFIDPSYERKEEYK 176 (283)
T ss_dssp ECCSHHHHHHHTTSCCT---T-SCEEEE--CSCHH---------HHHH-------HHCSCTTSCEEEEECCCCCSTTHHH
T ss_pred EeCCHHHHHHHHHHhCc---C-CcEEEE--eCcHH---------HHHH-------HhcCCCCCccEEEECCCCCCCcHHH
Confidence 99999999999999865 2 467765 45532 1111 0112245799999999653 455
Q ss_pred HHHHHHhh--ccCCCcEEEE
Q 041970 303 QLADHIVS--YAKPGAVVGI 320 (327)
Q Consensus 303 ~L~p~i~~--~LkpGG~LIl 320 (327)
+++..+.+ .+.|+|++++
T Consensus 177 ~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 177 EIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHhCccCCCeEEEE
Confidence 55555443 4568887764
No 304
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=67.61 E-value=4.5 Score=38.88 Aligned_cols=77 Identities=22% Similarity=0.368 Sum_probs=42.5
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeeeecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCCCccc
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGTVDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTFPSSMNE 266 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGcVDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~~~~~~g 266 (327)
+++|- -||.|.| |+..|+. +.++.+|+ .+|.||.|++.|+ ++ ..+++.+. .++..
T Consensus 60 iyVD~--TlG~GGH--S~~iL~~----lg~~GrVi---g~D~Dp~Al~~A~-rL-----~~~Rv~lv--~~nF~------ 114 (347)
T 3tka_A 60 IYIDG--TFGRGGH--SRLILSQ----LGEEGRLL---AIDRDPQAIAVAK-TI-----DDPRFSII--HGPFS------ 114 (347)
T ss_dssp EEEES--CCTTSHH--HHHHHTT----CCTTCEEE---EEESCHHHHHHHT-TC-----CCTTEEEE--ESCGG------
T ss_pred EEEEe--CcCCCHH--HHHHHHh----CCCCCEEE---EEECCHHHHHHHH-hh-----cCCcEEEE--eCCHH------
Confidence 55554 4899999 4333332 22333444 2899999999984 32 23577764 34431
Q ss_pred cccchhhhcccccccCCCCCCCeeEEEEcC
Q 041970 267 RVDGIVEYLSSHKIRGISETEEYDVVIANI 296 (327)
Q Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~fDlVvANI 296 (327)
...+++.. ..+ .+++|.|+.|+
T Consensus 115 ~l~~~L~~------~g~--~~~vDgILfDL 136 (347)
T 3tka_A 115 ALGEYVAE------RDL--IGKIDGILLDL 136 (347)
T ss_dssp GHHHHHHH------TTC--TTCEEEEEEEC
T ss_pred HHHHHHHh------cCC--CCcccEEEECC
Confidence 11111110 111 23699999997
No 305
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=67.09 E-value=4 Score=38.57 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=28.0
Q ss_pred CCeeEEEEcCCh--------------HHHHHHHHHHhhccCCCcEEEEeec
Q 041970 287 EEYDVVIANILL--------------NPLLQLADHIVSYAKPGAVVGISGI 323 (327)
Q Consensus 287 ~~fDlVvANIla--------------~vL~~L~p~i~~~LkpGG~LIlSGI 323 (327)
++||+|++|+.. ..+.-++.....+|+|||.|++-+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 679999999853 1223356778899999999998753
No 306
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=66.59 E-value=4.1 Score=38.00 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=29.5
Q ss_pred CCCeeEEEEcCChH-----------------HHHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILLN-----------------PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-----------------vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.++||+|++++... .+...+..+.++|+|||.+++.
T Consensus 31 ~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 56899999998642 4566778889999999999884
No 307
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=59.46 E-value=10 Score=35.61 Aligned_cols=36 Identities=31% Similarity=0.320 Sum_probs=27.0
Q ss_pred CCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 287 EEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 287 ~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
+.+|+|+-+.-... .+....+.|++||++++-|...
T Consensus 252 gg~Dvvid~~G~~~---~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 252 GGVDVVIECAGVAE---TVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp TCEEEEEECSCCHH---HHHHHHHHEEEEEEEEECSCCC
T ss_pred CCCCEEEECCCCHH---HHHHHHHHhccCCEEEEEeccC
Confidence 47999997765332 3456677899999999988754
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=57.10 E-value=7.1 Score=34.94 Aligned_cols=36 Identities=8% Similarity=0.075 Sum_probs=29.2
Q ss_pred CCCeeEEEEcCChH-----------------HHHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILLN-----------------PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-----------------vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.++||+|++.++.. .+...+..+.++|+|||.+++.
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 56899999998631 4566777888999999999887
No 309
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=56.09 E-value=10 Score=35.33 Aligned_cols=36 Identities=11% Similarity=0.188 Sum_probs=27.4
Q ss_pred CCCeeEEEEcCChH-------H--HHHHHHHHhhccCCC-cEEEEe
Q 041970 286 TEEYDVVIANILLN-------P--LLQLADHIVSYAKPG-AVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-------v--L~~L~p~i~~~LkpG-G~LIlS 321 (327)
.++||+|++++..+ . ...|+..+.+.|+|| |.|++.
T Consensus 138 ~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 138 PVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 56899999998433 1 123567778999999 999985
No 310
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=52.87 E-value=10 Score=35.47 Aligned_cols=47 Identities=21% Similarity=0.235 Sum_probs=36.0
Q ss_pred Cchhh---HHHHHHHHHhhhcCCCeeeeeee------------------ecCCH---HHHHHHHHHHHhcC
Q 041970 198 GEHAT---TKLCLLLLRSLIKGGELFLDYGT------------------VDIDP---QVIKSAHQNAALNN 244 (327)
Q Consensus 198 G~H~T---T~lcLe~Le~~~~~g~~VLDvGc------------------VDIDp---~AV~~A~eNa~lNg 244 (327)
+.||| ..++-.+|+.+..+|+.|||--| +|++| ..++.|+++++..+
T Consensus 221 ~~~~~~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 221 VGHPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CSCTTCCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCCCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 46887 56777777767778999999877 99999 99999999987654
No 311
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=50.91 E-value=12 Score=30.20 Aligned_cols=74 Identities=15% Similarity=0.189 Sum_probs=43.4
Q ss_pred ccCCCCCCC---CcEEEEEEeCCchHHHHHHHHHhcCCceEEEEcC-CCCC------CCCCCcEEEEEEcCCCCCHHHHH
Q 041970 63 SIYPPSVES---PYLLVRICCQKHALDMFSEAPLCFGASSTSVDEH-DNDA------DENSDEIYIDSIFPECKDVDECI 132 (327)
Q Consensus 63 ~~~~~~~~m---~w~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied~-~~~~------~~~~~~~~v~ayfp~~~~~~~~l 132 (327)
...|.+..| +...|++-+.++..|.+-++|.++|+.|+++.+. ..+. ......+.|....+ ++.++..+
T Consensus 12 ~~~~~~~~m~~~~mK~I~aIIr~~k~e~V~~aL~~~Gi~G~TV~~V~G~G~q~~~t~~~~g~kv~IeiVv~-de~ve~vv 90 (119)
T 2cz4_A 12 GLVPRGSHMDLVPLKLVTIVAESLLEKRLVEEVKRLGAKGYTITPARGEGSRGIRSVDWEGQNIRLETIVS-EEVALRIL 90 (119)
T ss_dssp --------CCEEEEEEEEEEEEGGGHHHHHHHHHHTTCCCCEEEEEBCTTCCCTTCSCSTTCEEEEEEEEC-HHHHHHHH
T ss_pred ccCcchhhCCcCCcEEEEEEECHHHHHHHHHHHHhCCCCcEEEcCCEEecCCCCccccccCCCEEEEEEEC-HHHHHHHH
Confidence 345667665 3567888888999999999999999999988543 1111 11113455555443 34566666
Q ss_pred Hhhhh
Q 041970 133 LNTAN 137 (327)
Q Consensus 133 ~~~~~ 137 (327)
+.+.+
T Consensus 91 ~~I~~ 95 (119)
T 2cz4_A 91 QRLQE 95 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 312
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=44.06 E-value=21 Score=34.23 Aligned_cols=27 Identities=11% Similarity=0.297 Sum_probs=20.8
Q ss_pred ecCCHHHHHHHHHHHHh--c-CCCCCcEEEE
Q 041970 226 VDIDPQVIKSAHQNAAL--N-NIGPKKMKLH 253 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~l--N-gv~~~~v~v~ 253 (327)
++-+|.+.+..++|+++ | +.+ .++.++
T Consensus 258 fEP~p~~~~~L~~n~~~~~N~~~~-~~v~~~ 287 (409)
T 2py6_A 258 IEPDRINLQTLQNVLRRYTDTNFA-SRITVH 287 (409)
T ss_dssp ECCCHHHHHHHHHHHHHTTTSTTG-GGEEEE
T ss_pred EcCCHHHHHHHHHHHHhhhccCCC-CCEEEE
Confidence 89999999999999998 5 341 345543
No 313
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=43.85 E-value=11 Score=31.13 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=10.7
Q ss_pred hcCCCeeeeeee
Q 041970 214 IKGGELFLDYGT 225 (327)
Q Consensus 214 ~~~g~~VLDvGc 225 (327)
+++|++|||+||
T Consensus 20 ~~~~~~vLDlGc 31 (196)
T 2nyu_A 20 LRPGLRVLDCGA 31 (196)
T ss_dssp CCTTCEEEEETC
T ss_pred CCCCCEEEEeCC
Confidence 467899999999
No 314
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=43.75 E-value=16 Score=34.15 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=28.8
Q ss_pred CCCeeEEEEcCChH--------------HHHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILLN--------------PLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~--------------vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.+++|+|++.++.. .+...+..+.++|+|||.+++.
T Consensus 56 ~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 56899999998642 3456667789999999999886
No 315
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=42.06 E-value=24 Score=33.20 Aligned_cols=36 Identities=11% Similarity=0.195 Sum_probs=27.7
Q ss_pred CCCeeEEEEcCChH-------H--HHHHHHHHhhccCCC-cEEEEe
Q 041970 286 TEEYDVVIANILLN-------P--LLQLADHIVSYAKPG-AVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla~-------v--L~~L~p~i~~~LkpG-G~LIlS 321 (327)
.+++|+|++++..+ . ...|+.-+...|+|| |.|++.
T Consensus 145 ~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 145 TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 56899999997643 1 234567778899999 999885
No 316
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=38.18 E-value=20 Score=33.10 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=27.1
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
.|-+.|.-.+.-|.|-+....++..++++..|..+||||.
T Consensus 12 IlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGg 51 (270)
T 4hb7_A 12 ILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGG 51 (270)
T ss_dssp EEECC----------CHHHHHHHHHHHHHHTTCSEEEEES
T ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 3667888777777798999999999999999999999998
No 317
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=37.07 E-value=28 Score=32.09 Aligned_cols=39 Identities=10% Similarity=-0.015 Sum_probs=33.3
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
|.+-|.-.+.-|.|-+...+++..++++..|..|||||+
T Consensus 12 lN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGg 50 (280)
T 1eye_A 12 LNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGG 50 (280)
T ss_dssp EECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 556777666667788889999999999999999999998
No 318
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=36.04 E-value=24 Score=33.14 Aligned_cols=40 Identities=28% Similarity=0.304 Sum_probs=27.9
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
.|-+-|--.+--|.|-+...+++..++++..|..|||||+
T Consensus 15 IlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGg 54 (314)
T 2vef_A 15 IINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGG 54 (314)
T ss_dssp EEECCC---------CHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 3667887777777788899999999999999999999999
No 319
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=33.90 E-value=1.1e+02 Score=29.10 Aligned_cols=28 Identities=7% Similarity=0.180 Sum_probs=19.9
Q ss_pred ecCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041970 226 VDIDPQVIKSAHQNAALNNIGPKKMKLHLVPDRTF 260 (327)
Q Consensus 226 VDIDp~AV~~A~eNa~lNgv~~~~v~v~~~~~d~~ 260 (327)
+++|+..+..-++.. . . +++++. .+|.+
T Consensus 88 vE~D~~l~~~L~~~~-~---~-~~l~ii--~~D~l 115 (353)
T 1i4w_A 88 LEKRSSLYKFLNAKF-E---G-SPLQIL--KRDPY 115 (353)
T ss_dssp ECCCHHHHHHHHHHT-T---T-SSCEEE--CSCTT
T ss_pred EecCHHHHHHHHHhc-c---C-CCEEEE--ECCcc
Confidence 899999998887765 2 1 456664 67764
No 320
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=29.20 E-value=44 Score=31.78 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=31.1
Q ss_pred CCCeeEEEEcCCh----HHHHHHHHHHhhccCCCcEEEEee
Q 041970 286 TEEYDVVIANILL----NPLLQLADHIVSYAKPGAVVGISG 322 (327)
Q Consensus 286 ~~~fDlVvANIla----~vL~~L~p~i~~~LkpGG~LIlSG 322 (327)
...||+|+.-+.. ..+..++..+.++|+|||.+++.|
T Consensus 99 ~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 99 AGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp TTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 5689999988884 246677888999999999999988
No 321
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=29.02 E-value=41 Score=26.67 Aligned_cols=32 Identities=19% Similarity=0.078 Sum_probs=27.4
Q ss_pred EEEEEEeCCchHHHHHHHHHhcCCceEEEEcC
Q 041970 74 LLVRICCQKHALDMFSEAPLCFGASSTSVDEH 105 (327)
Q Consensus 74 ~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied~ 105 (327)
..|++-+.++..|.+.++|.++|+.|.++-+.
T Consensus 7 KkIeaIi~p~kl~~V~~aL~~~Gv~G~TV~~v 38 (111)
T 3dfe_A 7 NKLVIVTEKVLLKKVAKIIEEAGATGYTVVDT 38 (111)
T ss_dssp EEEEEEEEGGGHHHHHHHHHHHTCSCCEEEEE
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCCcEEEEec
Confidence 45677788899999999999999999988654
No 322
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=28.88 E-value=34 Score=32.56 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=25.4
Q ss_pred CCCeeEEEEcCCh--------------HHHHHHHHHHhhccCCCcEEEEe
Q 041970 286 TEEYDVVIANILL--------------NPLLQLADHIVSYAKPGAVVGIS 321 (327)
Q Consensus 286 ~~~fDlVvANIla--------------~vL~~L~p~i~~~LkpGG~LIlS 321 (327)
.++||+|++.+.. ...+..+.-+.+.|+|||.|++-
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 4789999998642 12333445566789999999863
No 323
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=28.42 E-value=26 Score=32.59 Aligned_cols=40 Identities=20% Similarity=0.180 Sum_probs=26.6
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
.|.+-|.-.+--|.|-+....++..++++..|..|||||+
T Consensus 28 ilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGg 67 (294)
T 2y5s_A 28 ILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGG 67 (294)
T ss_dssp EEECCC----------CTTHHHHHHHHHHHTTCSEEEEES
T ss_pred EEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4668887766667788888899999999999999999999
No 324
>2o66_A PII protein; regulation of nitrogen and carbon metabolism, biosynthetic protein; HET: FLC; 1.90A {Arabidopsis thaliana} PDB: 2o67_A 2rd5_C*
Probab=28.35 E-value=70 Score=26.15 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=32.1
Q ss_pred cccCCCCCCCCcEEEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 62 SSIYPPSVESPYLLVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 62 ~~~~~~~~~m~w~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
|+=|.+...| ..|.+-+.++-.+.+-++|.+.|+.|.++-+
T Consensus 4 ~~~~~~~~~M--K~I~AIIr~~k~~~V~~AL~~~G~~G~Tv~~ 44 (135)
T 2o66_A 4 SSDYIPDSKF--YKVEAIVRPWRIQQVSSALLKIGIRGVTVSD 44 (135)
T ss_dssp CCSCSSCCSE--EEEEEEECGGGHHHHHHHHHHTTCCCCEEEE
T ss_pred CcCcCCCCCe--EEEEEEECHHHHHHHHHHHHHCCCceEEEEe
Confidence 3445566665 5666778899999999999999999988754
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=28.19 E-value=56 Score=29.89 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=26.1
Q ss_pred CeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeeccC
Q 041970 288 EYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGILS 325 (327)
Q Consensus 288 ~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl~ 325 (327)
.+|+|+-+.-... .+....+.|++||++++-|...
T Consensus 234 ~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 234 ELDFIISTIPTHY---DLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp CEEEEEECCCSCC---CHHHHHTTEEEEEEEEECCCCC
T ss_pred CCCEEEECCCcHH---HHHHHHHHHhcCCEEEEECCCC
Confidence 7999997654331 2456678899999999988754
No 326
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=28.09 E-value=69 Score=30.05 Aligned_cols=34 Identities=9% Similarity=0.215 Sum_probs=29.9
Q ss_pred CcEEEEEEeCCchHHHHHHHHHhcCCceEEEEcC
Q 041970 72 PYLLVRICCQKHALDMFSEAPLCFGASSTSVDEH 105 (327)
Q Consensus 72 ~w~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied~ 105 (327)
.|..|+..+++...-.+-+.|.++||.|+.+.+.
T Consensus 266 ~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~~I 299 (304)
T 1nh8_A 266 DWVAIRALVPRRDVNGIMDELAAIGAKAILASDI 299 (304)
T ss_dssp TEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEEEEcHHHHHHHHHHHHHcCCCeEEEeCh
Confidence 3999999999988888889999999999987643
No 327
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=25.94 E-value=43 Score=27.76 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=26.5
Q ss_pred CCeeEEEEcCChHHHHHHHHHHhhccCCCcEEEEeecc
Q 041970 287 EEYDVVIANILLNPLLQLADHIVSYAKPGAVVGISGIL 324 (327)
Q Consensus 287 ~~fDlVvANIla~vL~~L~p~i~~~LkpGG~LIlSGIl 324 (327)
..+|+|+.|.-. .......+.|++||++++-|..
T Consensus 106 ~~~D~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 106 YGVDVVLNSLAG----EAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp CCEEEEEECCCT----HHHHHHHHTEEEEEEEEECSCG
T ss_pred CCCeEEEECCch----HHHHHHHHHhccCCEEEEEcCC
Confidence 469999988743 3456777899999999988764
No 328
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=25.65 E-value=63 Score=26.13 Aligned_cols=35 Identities=17% Similarity=0.062 Sum_probs=30.4
Q ss_pred CCcEEEEEEeCCchHHHHHHHHHhc-CCceEEEEcC
Q 041970 71 SPYLLVRICCQKHALDMFSEAPLCF-GASSTSVDEH 105 (327)
Q Consensus 71 m~w~ei~i~~~~e~~d~v~~~L~e~-Ga~gv~ied~ 105 (327)
+....|++.++++-.|.|-++|.+. |..|+++.+.
T Consensus 21 ~~~~lI~aIIrP~kld~V~daL~~~~gi~G~TvseV 56 (120)
T 3ce8_A 21 STEQLLVLIAQNDIKDDIVDTLIELEFLSGFSLGNI 56 (120)
T ss_dssp CSEEEEEEEEEGGGHHHHHHHHTTCTTCCCCEEEEE
T ss_pred ccceEEEEEeCHHHHHHHHHHHHhCCCCCcEEEEee
Confidence 4577899999999999999999998 9999987653
No 329
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=25.02 E-value=50 Score=30.45 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=31.4
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
|.+-|.-.+--|.|-+...+++..++++..|..+||||+
T Consensus 21 lN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGg 59 (282)
T 1aj0_A 21 LNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGG 59 (282)
T ss_dssp EECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred EeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 445565555555688888999999999999999999998
No 330
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=24.43 E-value=40 Score=31.46 Aligned_cols=16 Identities=38% Similarity=0.708 Sum_probs=13.3
Q ss_pred eEEEccCc-ccCCCchh
Q 041970 186 NIILNPGL-AFGTGEHA 201 (327)
Q Consensus 186 ~I~idPG~-AFGTG~H~ 201 (327)
.|.+|||+ +||+|...
T Consensus 174 ~IilDPgig~~gk~~~~ 190 (300)
T 3k13_A 174 DIIFDPNVLAVATGIEE 190 (300)
T ss_dssp GEEEECCCCCCSSSCGG
T ss_pred HEEEeCCCCccCCChHH
Confidence 59999999 59999654
No 331
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=23.97 E-value=22 Score=33.12 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=24.0
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
.|.+.|.-.+--|.|-+....++..++++..|..|||||+
T Consensus 34 IlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGg 73 (294)
T 2dqw_A 34 VLNLTPDSFSDGGRYLDPERALERAREMVAEGADILDLGA 73 (294)
T ss_dssp EEECCC-------------CCHHHHHHHHHHTCSEEEEEC
T ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4668888777778888888889998999999999999998
No 332
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=23.35 E-value=87 Score=24.52 Aligned_cols=31 Identities=29% Similarity=0.283 Sum_probs=27.1
Q ss_pred EEEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 74 LLVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 74 ~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
.+|..-++++-.|.+-++|.+.|+.|.++-+
T Consensus 2 K~I~aIIr~~kl~~vk~AL~~~G~~g~Tv~~ 32 (112)
T 3mhy_A 2 KLVMAIIKPFKLDEVREALTSLGIQGLTVSE 32 (112)
T ss_dssp EEEEEEECGGGHHHHHHHHHHHTCCCEEEEE
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCCeEEEEE
Confidence 3677888999999999999999999998754
No 333
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=23.23 E-value=54 Score=30.50 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=32.2
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
|.+.|.-.+--|.|-+...++++.++++..|..+||||+
T Consensus 46 lNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGg 84 (297)
T 1tx2_A 46 LNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGG 84 (297)
T ss_dssp CCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEES
T ss_pred EeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 446676655556688889999999999999999999997
No 334
>2ns1_B Nitrogen regulatory protein P-II 2; protein-protein complex, membrane protein, ammonia, channel, inhibitor, signal protein, ADP, BOG; HET: BOG ADP; 1.96A {Escherichia coli} SCOP: d.58.5.1 PDB: 1gnk_A 2nuu_G* 2gnk_A*
Probab=22.98 E-value=85 Score=24.60 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=27.9
Q ss_pred cEEEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 73 YLLVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 73 w~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
..+|.+-++++..|.+-++|.+.|+.|.++-+
T Consensus 5 Mk~I~aIIr~~~~~~v~~AL~~~G~~g~Tv~~ 36 (116)
T 2ns1_B 5 MKLVTVIIKPFKLEDVREALSSIGIQGLTVTE 36 (116)
T ss_dssp EEEEEEEECGGGHHHHHHHHHHTTCCCCEEEE
T ss_pred eEEEEEEECHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45777889999999999999999999988754
No 335
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=22.56 E-value=1e+02 Score=24.30 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=27.0
Q ss_pred EEEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 74 LLVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 74 ~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
.+|.+-++++..|.+-++|.+.|+.|.++-+
T Consensus 4 k~I~aII~~~~~~~v~~aL~~~G~~g~Tv~~ 34 (119)
T 2j9c_A 4 KKVEAIIRPEKLEIVKKALSDAGYVGMTVSE 34 (119)
T ss_dssp EEEEEEECGGGHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4677778999999999999999999998754
No 336
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=22.18 E-value=1e+02 Score=28.57 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=29.8
Q ss_pred CcEEEEEEeCCchHHHHHHHHHhcCCceEEEEcC
Q 041970 72 PYLLVRICCQKHALDMFSEAPLCFGASSTSVDEH 105 (327)
Q Consensus 72 ~w~ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied~ 105 (327)
.|..|+..+++...-.+-+.|.++||.|+.+.+.
T Consensus 251 ~w~aV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~~i 284 (289)
T 2vd3_A 251 GVVAVHAVVDEKEVFNLINRLKAVGARDILVVPI 284 (289)
T ss_dssp CEEEEEEEEETTTHHHHHHHHHTTTCEEEEEEEC
T ss_pred CEEEEEEEEcHHHHHHHHHHHHHcCCCeEEEeCh
Confidence 4999999999988888889999999999987643
No 337
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=22.17 E-value=35 Score=32.15 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=21.8
Q ss_pred EEEccCcccCCCchhhHHHHHHHHHhhhcCCCeeeeeee
Q 041970 187 IILNPGLAFGTGEHATTKLCLLLLRSLIKGGELFLDYGT 225 (327)
Q Consensus 187 I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g~~VLDvGc 225 (327)
|.+-|.-.+--|.|-+...+++..++++..|..|||||+
T Consensus 48 lNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGg 86 (318)
T 2vp8_A 48 VNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGG 86 (318)
T ss_dssp EC--------------CHHHHHHHHHHHHTTCSEEEEC-
T ss_pred EeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 456676666666688888899999999999999999997
No 338
>2lic_A Vitellogenin; lipid transport; HET: SEP; NMR {Apis mellifera}
Probab=22.16 E-value=26 Score=21.84 Aligned_cols=9 Identities=67% Similarity=0.460 Sum_probs=3.9
Q ss_pred ecCCCCCCC
Q 041970 47 SAPSSSSSS 55 (327)
Q Consensus 47 ~~~~~~~~~ 55 (327)
|++|||-||
T Consensus 15 stssssiss 23 (35)
T 2lic_A 15 STSSSSISS 23 (35)
T ss_dssp CSCSSCCST
T ss_pred ccccccccc
Confidence 444444443
No 339
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=21.44 E-value=48 Score=30.54 Aligned_cols=24 Identities=33% Similarity=0.663 Sum_probs=16.0
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhh
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSL 213 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~ 213 (327)
.|.||||.-||. |+...+++|+++
T Consensus 181 ~IilDPg~gf~k----~~~~n~~ll~~l 204 (282)
T 1aj0_A 181 KLLLDPGFGFGK----NLSHNYSLLARL 204 (282)
T ss_dssp GEEEECCTTSSC----CHHHHHHHHHTG
T ss_pred hEEEeCCCCccc----CHHHHHHHHHHH
Confidence 599999988865 334445555554
No 340
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.78 E-value=94 Score=28.09 Aligned_cols=27 Identities=11% Similarity=0.250 Sum_probs=17.9
Q ss_pred eEEEccCcc-cCCCchhhHHHHHHHHHhh
Q 041970 186 NIILNPGLA-FGTGEHATTKLCLLLLRSL 213 (327)
Q Consensus 186 ~I~idPG~A-FGTG~H~TT~lcLe~Le~~ 213 (327)
.|.||||.. ||+|. +...-.|+.+..+
T Consensus 156 ~IilDPg~g~~g~~~-~~~~~~l~~l~~l 183 (262)
T 1f6y_A 156 DLYIDPLILPANVAQ-DHAPEVLKTLQQI 183 (262)
T ss_dssp GEEEECCCCCTTTCT-THHHHHHHHHHHH
T ss_pred cEEEeCCCCcCCCCh-HHHHHHHHHHHHH
Confidence 599999986 89985 2234455555544
No 341
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=20.76 E-value=94 Score=24.07 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=26.3
Q ss_pred EEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 75 LVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 75 ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
+|..-++++..|.+-++|.+.|+.|.++-+
T Consensus 3 ~I~aII~~~~~~~v~~aL~~~G~~g~Tv~~ 32 (112)
T 2eg2_A 3 KIEAIIKPFKLDEVKDALVEIGIGGMTVTE 32 (112)
T ss_dssp EEEEEECGGGHHHHHHHHHHTTCCCCEEEE
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCeEEEEE
Confidence 567788999999999999999999988754
No 342
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=20.51 E-value=72 Score=29.62 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=17.1
Q ss_pred eEEEccCcccCCCchhhHHHHHHHHHhhhcCC
Q 041970 186 NIILNPGLAFGTGEHATTKLCLLLLRSLIKGG 217 (327)
Q Consensus 186 ~I~idPG~AFGTG~H~TT~lcLe~Le~~~~~g 217 (327)
.|.||||..||.- .+-..-.|+.++++...|
T Consensus 193 ~IilDPG~Gf~kt-~~~n~~ll~~l~~~~~~g 223 (294)
T 2dqw_A 193 QVVLDPGFGFGKL-LEHNLALLRRLDEIVALG 223 (294)
T ss_dssp CEEEECCTTSSCC-HHHHHHHHHTHHHHHTTS
T ss_pred cEEEcCCCCcccC-HHHHHHHHHHHHHHhcCC
Confidence 5999999888762 222333444444443334
No 343
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=20.46 E-value=90 Score=24.36 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=26.0
Q ss_pred EEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 75 LVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 75 ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
.|.+-++++..|.+-++|.+.|+.|.++-+
T Consensus 3 ~I~aII~~~~~~~V~~aL~~~G~~g~Tv~~ 32 (116)
T 1vfj_A 3 LIVAIVRPEKLNEVLKALFQAEVRGLTLSR 32 (116)
T ss_dssp EEEEEECGGGHHHHHHHHHHTTCCCCEEEE
T ss_pred EEEEEECHHHHHHHHHHHHhCCCCeEEEEe
Confidence 567778899999999999999999987753
No 344
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=20.22 E-value=96 Score=28.22 Aligned_cols=27 Identities=11% Similarity=0.226 Sum_probs=18.6
Q ss_pred eEEEccCccc-CCCchhhHHHHHHHHHhh
Q 041970 186 NIILNPGLAF-GTGEHATTKLCLLLLRSL 213 (327)
Q Consensus 186 ~I~idPG~AF-GTG~H~TT~lcLe~Le~~ 213 (327)
.|.||||..| |+|.. -..-.|+.++.+
T Consensus 165 ~IilDPg~gfigk~~~-~~~~~l~~l~~~ 192 (271)
T 2yci_X 165 ELYIDPLILPVNVAQE-HAVEVLETIRQI 192 (271)
T ss_dssp GEEEECCCCCTTTSTH-HHHHHHHHHHHH
T ss_pred cEEEecCCCccccCHH-HHHHHHHHHHHH
Confidence 4999999999 99873 233455555554
No 345
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=20.13 E-value=99 Score=23.90 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=26.2
Q ss_pred EEEEEeCCchHHHHHHHHHhcCCceEEEEc
Q 041970 75 LVRICCQKHALDMFSEAPLCFGASSTSVDE 104 (327)
Q Consensus 75 ei~i~~~~e~~d~v~~~L~e~Ga~gv~ied 104 (327)
+|..-++++..|.+-++|.+.|+.|.++-+
T Consensus 3 ~I~aII~~~~~~~v~~aL~~~G~~g~Tv~~ 32 (112)
T 1hwu_A 3 QVTAIIKPFKLDEVRESLAEVGVTGLTVTE 32 (112)
T ss_dssp EEEEEECGGGHHHHHHHHHHTTCCCCEEEE
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCeEEEEe
Confidence 577788999999999999999999987753
Done!